PI0015088 (gene) Melon (PI 482460) v1

Overview
NamePI0015088
Typegene
OrganismCucumis metuliferus (Melon (PI 482460) v1)
Descriptionprotein PLASTID TRANSCRIPTIONALLY ACTIVE 7 isoform X1
Locationchr06: 8334044 .. 8336448 (+)
RNA-Seq ExpressionPI0015088
SyntenyPI0015088
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CTAAAGTTATAATATCATTCGAAAATGAAGATAGGACAGCCATGGCTACTCTAATCTCAACACTCTCCTTTGCTTCCCCTGTAATTACTCTACCCGTTTGATTCTTCGTCCAATGGTGTCGGAAACTTTAATATAGATATTCTGTTTGATCCCTTCTTTTGATCTTTACTTTCTCTTCCAAAATTCATTCAGTCGTGCTTATGTTTGGGTTTTCTTTCAGTTATTGCCGCTCAGGATTGAGGTGAATCCCCGAATTTCTCCTGCCTTGAACTTTCGTCCCCCGTTTCAGGTTAACATTTCATTGATTTTCTCAACAACCCCAACTTACTAATCTTCTTTTGCCTCTCACTCTTCGTGTTTTTCTTGTTTACATTTTCAGGTGGTCGCTAGAAAACAGAGAAATGGTGAAGTTAGTGGTCGGCGAGTGTGGCAACGAAGAAAATTGGTATGGTGAATGTGTTTTATTCTTTCTCTTAGTTTCTCCCCTACCCTTTTATCGTTTGTTTCATTTGTCTCCCATTTCATGGCTTTCTGAAACTAGAGTCTTGCAATGTTGGGCTAATTCGACCTAAATTTCATGAATGAAACAAAGAGTGAAACTTTGATAGAAACTTAGTTTTTGTAGGGATAATTCGTGTATTACAACTGCTGAAGCATTGGGACTATGAATTTCTCTCTTTTGTGGAGTCTTACTCCTTTTTTCAGTGGCTTTTGTGGGTACAAAGTGCTCCTGCCTCCTGTTGGAGTGCATTACATAATTATTTTGTGATAACATAATCTTTTTATGATGACATACCATTTCTTTGATTAACCTATATTGGTTGTATTTCAGTTGGTAACTTTCCTCTATCATGGCCTCTTGGTTGTTTTCTTTTTATATTTATTTTTCCTTAATATATGGTTTCTTCTATTAAGAGAGAGAGAGAGAGATTTTGTCCATGCCTCCTTGTGGTTAGTGTTTCTTTGCTATTAGTATTGTATGTGAACTACAGTTTACAACAGAGATGTGTAAACTTCGGAAAAAGGTAATTTGGGTCATTTGGTTCTTTTGTGACGAATATTGGAGATGTTATTGCTTGTTATAGCATCTTTTTTATTAATGCAACCCCATGGTTTTTCATTGATAACTATCTAAATGGGGGTGTGTCATTTATGATTCTTCTTTCCAATTGATCAAACTTTGGTGATTACTGATAATTAGGTGTCACGGGGTGATTCCCGAGTAGGAAATTCTTACCTCTTTGGTCGTGACATTAGGATACAAGCACCATAGATAGTTAAAAACTCTAGACTATGTGGGGTTCTGGGTTCATGGTAGTATTCAAATCCTACAAGTTTCTTAGTAACATGGTAGATCAGGCAGTTGTCTGGATGAAATTAGGCGAGATGTGTAAATCGGCTCTGATACTTCTAAGAAAAATAATGATATGGACTGCACACTTAGTGTAGGATTAGGTGGAATATAGGAAACATTGAGATGATTGATCACCTTCAACCAGACTTCTGTGGATCTTACTACTTGCTATTAGTAGGATGCGAACTATGCAATATAATTTAGATGAAAAGGTGTAAATATTGGGAGTTTCTCGAAACAAATAGAATTCTGAGATCGTTTGGGATTATAGGCCACTTTCTGGCAGATCAAAAATTTTCTTCTAAAATTGAAGAATGAAATCTTTTTTGATATAGAACGACTTTGGGGAGAATTAGTTAAAATCATGTATCGTTATTTTGTAAGAGTTTGCTATGTTGTTGTTGTTGACATTGAAACTTCTAATTTCATTCCTTATTCAGACAAAGAAGGATGACATGTCAATCTACAAAATGGATCGAATCCCATTCCTTGAAGAACAGGTAAGGAAGGTAAAGGAACAGGGGAAGCTCATAACAATGGACATTGAAAGACTATTATTATCAGAGGACAACCGCTTTGATTTTGTGAATGAGGTTGCAGCTGAGGCTAAGGAATATGTCGAGAGCAACCGCGATGAATATGGAGGATCCAAGAAAGCCATTCTTCACGTTCTTAGCAACCGAGTGAACGATGCAGGGTTTTATCGGCCAGATGCTTATGCAGAAGATGACCCATTTAAACCCGGACCTCATTATCTGAAACAAGAATTTACGTGAAGAATCTGATTACAAAATCCATTTTCTTATACAGACTATCAATGGATTAATCTGATTTTTCCAGTTTTTAAATGTTAGCTAGTGCCTATGTCTCTTCTGATTAAGAATTGTGCTCGCCTCATGAGTTTTTTCTAACCAAATATACCTCTTTAAACTGCTACTTTTCTATTCGTTATGTTTCATCCAACATTCCCAAAAGGAGGGAAGATTGTTATCGACAAACTTATGAAACCATTAGAAAGTTTCTTTTATAAACTCCATTTGTTGTTTTCCTC

mRNA sequence

CTAAAGTTATAATATCATTCGAAAATGAAGATAGGACAGCCATGGCTACTCTAATCTCAACACTCTCCTTTGCTTCCCCTTTATTGCCGCTCAGGATTGAGGTGAATCCCCGAATTTCTCCTGCCTTGAACTTTCGTCCCCCGTTTCAGGTGGTCGCTAGAAAACAGAGAAATGGTGAAGTTAGTGGTCGGCGAGTGTGGCAACGAAGAAAATTGACAAAGAAGGATGACATGTCAATCTACAAAATGGATCGAATCCCATTCCTTGAAGAACAGGTAAGGAAGGTAAAGGAACAGGGGAAGCTCATAACAATGGACATTGAAAGACTATTATTATCAGAGGACAACCGCTTTGATTTTGTGAATGAGGTTGCAGCTGAGGCTAAGGAATATGTCGAGAGCAACCGCGATGAATATGGAGGATCCAAGAAAGCCATTCTTCACGTTCTTAGCAACCGAGTGAACGATGCAGGGTTTTATCGGCCAGATGCTTATGCAGAAGATGACCCATTTAAACCCGGACCTCATTATCTGAAACAAGAATTTACGTGAAGAATCTGATTACAAAATCCATTTTCTTATACAGACTATCAATGGATTAATCTGATTTTTCCAGTTTTTAAATGTTAGCTAGTGCCTATGTCTCTTCTGATTAAGAATTGTGCTCGCCTCATGAGTTTTTTCTAACCAAATATACCTCTTTAAACTGCTACTTTTCTATTCGTTATGTTTCATCCAACATTCCCAAAAGGAGGGAAGATTGTTATCGACAAACTTATGAAACCATTAGAAAGTTTCTTTTATAAACTCCATTTGTTGTTTTCCTC

Coding sequence (CDS)

ATGGCTACTCTAATCTCAACACTCTCCTTTGCTTCCCCTTTATTGCCGCTCAGGATTGAGGTGAATCCCCGAATTTCTCCTGCCTTGAACTTTCGTCCCCCGTTTCAGGTGGTCGCTAGAAAACAGAGAAATGGTGAAGTTAGTGGTCGGCGAGTGTGGCAACGAAGAAAATTGACAAAGAAGGATGACATGTCAATCTACAAAATGGATCGAATCCCATTCCTTGAAGAACAGGTAAGGAAGGTAAAGGAACAGGGGAAGCTCATAACAATGGACATTGAAAGACTATTATTATCAGAGGACAACCGCTTTGATTTTGTGAATGAGGTTGCAGCTGAGGCTAAGGAATATGTCGAGAGCAACCGCGATGAATATGGAGGATCCAAGAAAGCCATTCTTCACGTTCTTAGCAACCGAGTGAACGATGCAGGGTTTTATCGGCCAGATGCTTATGCAGAAGATGACCCATTTAAACCCGGACCTCATTATCTGAAACAAGAATTTACGTGA

Protein sequence

MATLISTLSFASPLLPLRIEVNPRISPALNFRPPFQVVARKQRNGEVSGRRVWQRRKLTKKDDMSIYKMDRIPFLEEQVRKVKEQGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVESNRDEYGGSKKAILHVLSNRVNDAGFYRPDAYAEDDPFKPGPHYLKQEFT
Homology
[Close]
BLAST of PI0015088 vs. ExPASy Swiss-Prot
Match: Q8VZV9 (Protein PLASTID TRANSCRIPTIONALLY ACTIVE 7 OS=Arabidopsis thaliana OX=3702 GN=PTAC7 PE=1 SV=1)

HSP 1 Score: 188.0 bits (476), Expect = 9.0e-47
Identity = 100/163 (61.35%), Postives = 120/163 (73.62%), Query Frame = 0 

Query: 7   TLSFASPLLPLRIEVNPRISPALNFRPPFQVVARKQRNGEVSGRRVWQRRKLTKKDDMSI 66
           T S  S +LP+   ++ R     N R  FQ         + +GRRVW+RR LTKKDDM  
Sbjct: 5   TCSSPSSILPI---IDTRSG---NLRCTFQSQVSCGIQRDDNGRRVWRRRTLTKKDDMLR 64

Query: 67  YKMDRIPFLEEQVRKVKEQGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVESNRDEYG 126
           YKM R+PF+EEQVRK++E GK++TMDIE+LLL EDNRF+FVN VAAEA EYV+ NRDEYG
Sbjct: 65  YKMQRVPFVEEQVRKIREVGKVMTMDIEQLLLREDNRFEFVNSVAAEATEYVDKNRDEYG 124

Query: 127 GSKKAILHVLSNRVNDAGFYRPDAYAEDDPFKPGPHYLKQEFT 170
           GSKKAI HVLSNRVND GF RP+AY E DP+KPGP YL + +T
Sbjct: 125 GSKKAIFHVLSNRVNDLGFDRPEAYVEADPYKPGPGYLLEYYT 161

[Close]
BLAST of PI0015088 vs. ExPASy TrEMBL
Match: A0A5A7U3Y9 (KH domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold175G001660 PE=4 SV=1)

HSP 1 Score: 325.9 bits (834), Expect = 1.0e-85
Identity = 164/169 (97.04%), Postives = 166/169 (98.22%), Query Frame = 0 

Query: 1   MATLISTLSFASPLLPLRIEVNPRISPALNFRPPFQVVARKQRNGEVSGRRVWQRRKLTK 60
           MAT ISTLSFASP LPLRIE NPRISPALNFRPPFQVVARKQRNGEVSGRRVW+RRKLTK
Sbjct: 665 MATPISTLSFASPFLPLRIEANPRISPALNFRPPFQVVARKQRNGEVSGRRVWRRRKLTK 724

Query: 61  KDDMSIYKMDRIPFLEEQVRKVKEQGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVES 120
           KDDMSIYKMDRIPFLEEQVR+VKEQGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVES
Sbjct: 725 KDDMSIYKMDRIPFLEEQVRRVKEQGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVES 784

Query: 121 NRDEYGGSKKAILHVLSNRVNDAGFYRPDAYAEDDPFKPGPHYLKQEFT 170
           NRDEYGGSKKAILHVLSNRVNDAGFYRPDAYAEDDPFKPGPHYLKQEFT
Sbjct: 785 NRDEYGGSKKAILHVLSNRVNDAGFYRPDAYAEDDPFKPGPHYLKQEFT 833

[Close]
BLAST of PI0015088 vs. ExPASy TrEMBL
Match: A0A1S3C3E7 (protein PLASTID TRANSCRIPTIONALLY ACTIVE 7 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103496049 PE=4 SV=1)

HSP 1 Score: 325.9 bits (834), Expect = 1.0e-85
Identity = 164/169 (97.04%), Postives = 166/169 (98.22%), Query Frame = 0 

Query: 1   MATLISTLSFASPLLPLRIEVNPRISPALNFRPPFQVVARKQRNGEVSGRRVWQRRKLTK 60
           MAT ISTLSFASP LPLRIE NPRISPALNFRPPFQVVARKQRNGEVSGRRVW+RRKLTK
Sbjct: 1   MATPISTLSFASPFLPLRIEANPRISPALNFRPPFQVVARKQRNGEVSGRRVWRRRKLTK 60

Query: 61  KDDMSIYKMDRIPFLEEQVRKVKEQGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVES 120
           KDDMSIYKMDRIPFLEEQVR+VKEQGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVES
Sbjct: 61  KDDMSIYKMDRIPFLEEQVRRVKEQGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVES 120

Query: 121 NRDEYGGSKKAILHVLSNRVNDAGFYRPDAYAEDDPFKPGPHYLKQEFT 170
           NRDEYGGSKKAILHVLSNRVNDAGFYRPDAYAEDDPFKPGPHYLKQEFT
Sbjct: 121 NRDEYGGSKKAILHVLSNRVNDAGFYRPDAYAEDDPFKPGPHYLKQEFT 169

[Close]
BLAST of PI0015088 vs. ExPASy TrEMBL
Match: A0A0A0L9J8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G238200 PE=4 SV=1)

HSP 1 Score: 319.7 bits (818), Expect = 7.3e-84
Identity = 160/169 (94.67%), Postives = 166/169 (98.22%), Query Frame = 0 

Query: 1   MATLISTLSFASPLLPLRIEVNPRISPALNFRPPFQVVARKQRNGEVSGRRVWQRRKLTK 60
           MAT ISTLSFASP LPLRIE NPRISPALNFRPPFQ+VARKQ++GEVSGRRVW+RRKLTK
Sbjct: 1   MATPISTLSFASPSLPLRIEANPRISPALNFRPPFQLVARKQKSGEVSGRRVWRRRKLTK 60

Query: 61  KDDMSIYKMDRIPFLEEQVRKVKEQGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVES 120
           KDDMSIYKMDRIPFLEEQVR+VKEQGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVES
Sbjct: 61  KDDMSIYKMDRIPFLEEQVRRVKEQGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVES 120

Query: 121 NRDEYGGSKKAILHVLSNRVNDAGFYRPDAYAEDDPFKPGPHYLKQEFT 170
           NRDEYGG+KKAILHVLSNRVNDAGFYRPDAYAEDDPFKPGPHYLKQEFT
Sbjct: 121 NRDEYGGTKKAILHVLSNRVNDAGFYRPDAYAEDDPFKPGPHYLKQEFT 169

[Close]
BLAST of PI0015088 vs. ExPASy TrEMBL
Match: A0A1S4E109 (protein PLASTID TRANSCRIPTIONALLY ACTIVE 7 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103496049 PE=4 SV=1)

HSP 1 Score: 307.0 bits (785), Expect = 4.9e-80
Identity = 152/155 (98.06%), Postives = 154/155 (99.35%), Query Frame = 0 

Query: 15  LPLRIEVNPRISPALNFRPPFQVVARKQRNGEVSGRRVWQRRKLTKKDDMSIYKMDRIPF 74
           LPLRIE NPRISPALNFRPPFQVVARKQRNGEVSGRRVW+RRKLTKKDDMSIYKMDRIPF
Sbjct: 3   LPLRIEANPRISPALNFRPPFQVVARKQRNGEVSGRRVWRRRKLTKKDDMSIYKMDRIPF 62

Query: 75  LEEQVRKVKEQGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVESNRDEYGGSKKAILH 134
           LEEQVR+VKEQGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVESNRDEYGGSKKAILH
Sbjct: 63  LEEQVRRVKEQGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVESNRDEYGGSKKAILH 122

Query: 135 VLSNRVNDAGFYRPDAYAEDDPFKPGPHYLKQEFT 170
           VLSNRVNDAGFYRPDAYAEDDPFKPGPHYLKQEFT
Sbjct: 123 VLSNRVNDAGFYRPDAYAEDDPFKPGPHYLKQEFT 157

[Close]
BLAST of PI0015088 vs. ExPASy TrEMBL
Match: A0A5D3CIV3 (KH domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold227G001500 PE=4 SV=1)

HSP 1 Score: 303.9 bits (777), Expect = 4.2e-79
Identity = 151/155 (97.42%), Postives = 153/155 (98.71%), Query Frame = 0 

Query: 15  LPLRIEVNPRISPALNFRPPFQVVARKQRNGEVSGRRVWQRRKLTKKDDMSIYKMDRIPF 74
           LPLRIE NPRIS ALNFRPPFQVVARKQRNGEVSGRRVW+RRKLTKKDDMSIYKMDRIPF
Sbjct: 673 LPLRIEANPRISSALNFRPPFQVVARKQRNGEVSGRRVWRRRKLTKKDDMSIYKMDRIPF 732

Query: 75  LEEQVRKVKEQGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVESNRDEYGGSKKAILH 134
           LEEQVR+VKEQGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVESNRDEYGGSKKAILH
Sbjct: 733 LEEQVRRVKEQGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVESNRDEYGGSKKAILH 792

Query: 135 VLSNRVNDAGFYRPDAYAEDDPFKPGPHYLKQEFT 170
           VLSNRVNDAGFYRPDAYAEDDPFKPGPHYLKQEFT
Sbjct: 793 VLSNRVNDAGFYRPDAYAEDDPFKPGPHYLKQEFT 827

[Close]
BLAST of PI0015088 vs. NCBI nr
Match: KAA0050522.1 (KH domain-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 325.9 bits (834), Expect = 2.1e-85
Identity = 164/169 (97.04%), Postives = 166/169 (98.22%), Query Frame = 0 

Query: 1   MATLISTLSFASPLLPLRIEVNPRISPALNFRPPFQVVARKQRNGEVSGRRVWQRRKLTK 60
           MAT ISTLSFASP LPLRIE NPRISPALNFRPPFQVVARKQRNGEVSGRRVW+RRKLTK
Sbjct: 665 MATPISTLSFASPFLPLRIEANPRISPALNFRPPFQVVARKQRNGEVSGRRVWRRRKLTK 724

Query: 61  KDDMSIYKMDRIPFLEEQVRKVKEQGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVES 120
           KDDMSIYKMDRIPFLEEQVR+VKEQGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVES
Sbjct: 725 KDDMSIYKMDRIPFLEEQVRRVKEQGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVES 784

Query: 121 NRDEYGGSKKAILHVLSNRVNDAGFYRPDAYAEDDPFKPGPHYLKQEFT 170
           NRDEYGGSKKAILHVLSNRVNDAGFYRPDAYAEDDPFKPGPHYLKQEFT
Sbjct: 785 NRDEYGGSKKAILHVLSNRVNDAGFYRPDAYAEDDPFKPGPHYLKQEFT 833

[Close]
BLAST of PI0015088 vs. NCBI nr
Match: XP_008455984.1 (PREDICTED: protein PLASTID TRANSCRIPTIONALLY ACTIVE 7 isoform X1 [Cucumis melo])

HSP 1 Score: 325.9 bits (834), Expect = 2.1e-85
Identity = 164/169 (97.04%), Postives = 166/169 (98.22%), Query Frame = 0 

Query: 1   MATLISTLSFASPLLPLRIEVNPRISPALNFRPPFQVVARKQRNGEVSGRRVWQRRKLTK 60
           MAT ISTLSFASP LPLRIE NPRISPALNFRPPFQVVARKQRNGEVSGRRVW+RRKLTK
Sbjct: 1   MATPISTLSFASPFLPLRIEANPRISPALNFRPPFQVVARKQRNGEVSGRRVWRRRKLTK 60

Query: 61  KDDMSIYKMDRIPFLEEQVRKVKEQGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVES 120
           KDDMSIYKMDRIPFLEEQVR+VKEQGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVES
Sbjct: 61  KDDMSIYKMDRIPFLEEQVRRVKEQGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVES 120

Query: 121 NRDEYGGSKKAILHVLSNRVNDAGFYRPDAYAEDDPFKPGPHYLKQEFT 170
           NRDEYGGSKKAILHVLSNRVNDAGFYRPDAYAEDDPFKPGPHYLKQEFT
Sbjct: 121 NRDEYGGSKKAILHVLSNRVNDAGFYRPDAYAEDDPFKPGPHYLKQEFT 169

[Close]
BLAST of PI0015088 vs. NCBI nr
Match: XP_004146231.1 (protein PLASTID TRANSCRIPTIONALLY ACTIVE 7 [Cucumis sativus] >KGN57654.1 hypothetical protein Csa_010112 [Cucumis sativus])

HSP 1 Score: 319.7 bits (818), Expect = 1.5e-83
Identity = 160/169 (94.67%), Postives = 166/169 (98.22%), Query Frame = 0 

Query: 1   MATLISTLSFASPLLPLRIEVNPRISPALNFRPPFQVVARKQRNGEVSGRRVWQRRKLTK 60
           MAT ISTLSFASP LPLRIE NPRISPALNFRPPFQ+VARKQ++GEVSGRRVW+RRKLTK
Sbjct: 1   MATPISTLSFASPSLPLRIEANPRISPALNFRPPFQLVARKQKSGEVSGRRVWRRRKLTK 60

Query: 61  KDDMSIYKMDRIPFLEEQVRKVKEQGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVES 120
           KDDMSIYKMDRIPFLEEQVR+VKEQGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVES
Sbjct: 61  KDDMSIYKMDRIPFLEEQVRRVKEQGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVES 120

Query: 121 NRDEYGGSKKAILHVLSNRVNDAGFYRPDAYAEDDPFKPGPHYLKQEFT 170
           NRDEYGG+KKAILHVLSNRVNDAGFYRPDAYAEDDPFKPGPHYLKQEFT
Sbjct: 121 NRDEYGGTKKAILHVLSNRVNDAGFYRPDAYAEDDPFKPGPHYLKQEFT 169

[Close]
BLAST of PI0015088 vs. NCBI nr
Match: XP_038891427.1 (protein PLASTID TRANSCRIPTIONALLY ACTIVE 7 [Benincasa hispida])

HSP 1 Score: 313.9 bits (803), Expect = 8.3e-82
Identity = 159/169 (94.08%), Postives = 163/169 (96.45%), Query Frame = 0 

Query: 1   MATLISTLSFASPLLPLRIEVNPRISPALNFRPPFQVVARKQRNGEVSGRRVWQRRKLTK 60
           M+T ISTLSFASPLLP RIEV PRISPA NFR PFQVVARKQRNGE SGRRVW+RRKLTK
Sbjct: 1   MSTPISTLSFASPLLPHRIEVKPRISPAFNFRSPFQVVARKQRNGEGSGRRVWRRRKLTK 60

Query: 61  KDDMSIYKMDRIPFLEEQVRKVKEQGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVES 120
           KDDMSIYKMDRIPFLEEQVRKVKEQGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVES
Sbjct: 61  KDDMSIYKMDRIPFLEEQVRKVKEQGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVES 120

Query: 121 NRDEYGGSKKAILHVLSNRVNDAGFYRPDAYAEDDPFKPGPHYLKQEFT 170
           NRDEYGGSKKAILHVLSNRVNDAGFYRPDAYAEDDPFKPGPH+LKQE+T
Sbjct: 121 NRDEYGGSKKAILHVLSNRVNDAGFYRPDAYAEDDPFKPGPHFLKQEYT 169

[Close]
BLAST of PI0015088 vs. NCBI nr
Match: XP_016901917.1 (PREDICTED: protein PLASTID TRANSCRIPTIONALLY ACTIVE 7 isoform X2 [Cucumis melo])

HSP 1 Score: 307.0 bits (785), Expect = 1.0e-79
Identity = 152/155 (98.06%), Postives = 154/155 (99.35%), Query Frame = 0 

Query: 15  LPLRIEVNPRISPALNFRPPFQVVARKQRNGEVSGRRVWQRRKLTKKDDMSIYKMDRIPF 74
           LPLRIE NPRISPALNFRPPFQVVARKQRNGEVSGRRVW+RRKLTKKDDMSIYKMDRIPF
Sbjct: 3   LPLRIEANPRISPALNFRPPFQVVARKQRNGEVSGRRVWRRRKLTKKDDMSIYKMDRIPF 62

Query: 75  LEEQVRKVKEQGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVESNRDEYGGSKKAILH 134
           LEEQVR+VKEQGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVESNRDEYGGSKKAILH
Sbjct: 63  LEEQVRRVKEQGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVESNRDEYGGSKKAILH 122

Query: 135 VLSNRVNDAGFYRPDAYAEDDPFKPGPHYLKQEFT 170
           VLSNRVNDAGFYRPDAYAEDDPFKPGPHYLKQEFT
Sbjct: 123 VLSNRVNDAGFYRPDAYAEDDPFKPGPHYLKQEFT 157

[Close]
BLAST of PI0015088 vs. TAIR 10
Match: AT5G24314.1 (plastid transcriptionally active7 )

HSP 1 Score: 188.0 bits (476), Expect = 6.4e-48
Identity = 100/163 (61.35%), Postives = 120/163 (73.62%), Query Frame = 0 

Query: 7   TLSFASPLLPLRIEVNPRISPALNFRPPFQVVARKQRNGEVSGRRVWQRRKLTKKDDMSI 66
           T S  S +LP+   ++ R     N R  FQ         + +GRRVW+RR LTKKDDM  
Sbjct: 5   TCSSPSSILPI---IDTRSG---NLRCTFQSQVSCGIQRDDNGRRVWRRRTLTKKDDMLR 64

Query: 67  YKMDRIPFLEEQVRKVKEQGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVESNRDEYG 126
           YKM R+PF+EEQVRK++E GK++TMDIE+LLL EDNRF+FVN VAAEA EYV+ NRDEYG
Sbjct: 65  YKMQRVPFVEEQVRKIREVGKVMTMDIEQLLLREDNRFEFVNSVAAEATEYVDKNRDEYG 124

Query: 127 GSKKAILHVLSNRVNDAGFYRPDAYAEDDPFKPGPHYLKQEFT 170
           GSKKAI HVLSNRVND GF RP+AY E DP+KPGP YL + +T
Sbjct: 125 GSKKAIFHVLSNRVNDLGFDRPEAYVEADPYKPGPGYLLEYYT 161

[Close]
BLAST of PI0015088 vs. TAIR 10
Match: AT5G24314.2 (plastid transcriptionally active7 )

HSP 1 Score: 180.6 bits (457), Expect = 1.0e-45
Identity = 100/171 (58.48%), Postives = 120/171 (70.18%), Query Frame = 0 

Query: 7   TLSFASPLLPLRIEVNPRISPALNFRPPFQVVARKQRNGEVSGRRVWQRRK--------L 66
           T S  S +LP+   ++ R     N R  FQ         + +GRRVW+RR         L
Sbjct: 5   TCSSPSSILPI---IDTRSG---NLRCTFQSQVSCGIQRDDNGRRVWRRRTLVSTKLDIL 64

Query: 67  TKKDDMSIYKMDRIPFLEEQVRKVKEQGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYV 126
           TKKDDM  YKM R+PF+EEQVRK++E GK++TMDIE+LLL EDNRF+FVN VAAEA EYV
Sbjct: 65  TKKDDMLRYKMQRVPFVEEQVRKIREVGKVMTMDIEQLLLREDNRFEFVNSVAAEATEYV 124

Query: 127 ESNRDEYGGSKKAILHVLSNRVNDAGFYRPDAYAEDDPFKPGPHYLKQEFT 170
           + NRDEYGGSKKAI HVLSNRVND GF RP+AY E DP+KPGP YL + +T
Sbjct: 125 DKNRDEYGGSKKAIFHVLSNRVNDLGFDRPEAYVEADPYKPGPGYLLEYYT 169

The following BLAST results are available for this feature:
BLAST of PI0015088 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q8VZV99.0e-4761.35Protein PLASTID TRANSCRIPTIONALLY ACTIVE 7 OS=Arabidopsis thaliana OX=3702 GN=PT... [more]
BLAST of PI0015088 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7U3Y91.0e-8597.04KH domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sca... [more]
A0A1S3C3E71.0e-8597.04protein PLASTID TRANSCRIPTIONALLY ACTIVE 7 isoform X1 OS=Cucumis melo OX=3656 GN... [more]
A0A0A0L9J87.3e-8494.67Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G238200 PE=4 SV=1[more]
A0A1S4E1094.9e-8098.06protein PLASTID TRANSCRIPTIONALLY ACTIVE 7 isoform X2 OS=Cucumis melo OX=3656 GN... [more]
A0A5D3CIV34.2e-7997.42KH domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sca... [more]
BLAST of PI0015088 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0050522.12.1e-8597.04KH domain-containing protein [Cucumis melo var. makuwa][more]
XP_008455984.12.1e-8597.04PREDICTED: protein PLASTID TRANSCRIPTIONALLY ACTIVE 7 isoform X1 [Cucumis melo][more]
XP_004146231.11.5e-8394.67protein PLASTID TRANSCRIPTIONALLY ACTIVE 7 [Cucumis sativus] >KGN57654.1 hypothe... [more]
XP_038891427.18.3e-8294.08protein PLASTID TRANSCRIPTIONALLY ACTIVE 7 [Benincasa hispida][more]
XP_016901917.11.0e-7998.06PREDICTED: protein PLASTID TRANSCRIPTIONALLY ACTIVE 7 isoform X2 [Cucumis melo][more]
BLAST of PI0015088 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G24314.16.4e-4861.35plastid transcriptionally active7 [more]
AT5G24314.21.0e-4558.48plastid transcriptionally active7 [more]
InterPro
Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR038958Protein plastid transcriptionally active 7PANTHERPTHR37257PROTEIN PLASTID TRANSCRIPTIONALLY ACTIVE 7coord: 27..168

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
PI0015088.1PI0015088.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0042793 plastid transcription
cellular_component GO:0000427 plastid-encoded plastid RNA polymerase complex
molecular_function GO:0003723 RNA binding