PI0014893 (gene) Melon (PI 482460) v1

Overview


Name	PI0014893
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	E3 ubiquitin-protein ligase CHIP
Location	chr04: 17242798 .. 17244815 (+)
RNA-Seq Expression	PI0014893
Synteny	PI0014893

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGACCAGGAGTCCCCTTGTCTGGCGCAGCAAAACAGGCTGAGATTCTCAGGAAGAAGGGAACCACTATTTTCAAAAGGGTCGAATTGGAGCTGCCATTGAAGCTTATACCGAGGTTTCTCTCTATCTCTTCAATCCTTCTTTCTAATTTCTATTTGGGTTTCCTCATAATGTTTGGGATTGTATCAAGATCGAATCATTTCATTGTGGCGTTCTTGAGTTTTACTTTTTTTTTTTTGTGTTGATTTTGTGATATTCTTCTTGGTGGTTGGAATTTTAGGCTATTACACTATGCCCCTGGTTCCTGTGTACTTGACGAACCGTGCGTTGTGTCATCGCAAGCGGAAGTATGTACAGGCACCTATCCTTATTCCTTTACACACACATATATATATATTTGCACATTCTTTTTTTTGGTTTTTACATTGTTTGTCTTTATTTCCTGCCTCATTTCCTTCCGAGAGAATTGAAAATTTATTGATGTGATAATTTCTTTTCAATGGTGTATAGTGATTGGAAGAAGGTGGAGGAGGATTGTCGGAGAGCTATTCAGCTTGATAGCAGTTCTGTAAAGGTACTGGTTTGCTGTATATTCTTTAAACATTGGAAATTTGGTTGTTTCTTAGAGTCCAATAAGGCAGTGTTGATAGGGAAACTAACATGACATGATATGGATATGGTGAGACCTAATTTTCTTGAAATCTTGGGCACGGGCGTGTTTATCAATATACATTTCTTTTAAGTATTTGTTGTTTTTATATCGGAATGAAATTCAAAATCCGTGAACTTCTGCATTTATATGGCTAAAAAGGGGTTTGATGTATTTCTCTTTTGAAATTTATAAGTTTTTTGTCTACTATTTATGTCTATTTATCATGCTCAACAGCGGTTAGATATGTGCTTAACAAATTTTCCGACTCACATTCACAATTTATACATCTGGTACATAACCCACATTTTTTCTATGAACAAATCTGAAGTATCCTACAAGTGTTGAAGTGTAAGAGTCTCTTCTCTACTGCACGTGACCCAAACAAAATTGTTTGTATTGCTTCCTATATATGTATGAACAGATTTGAAGTGTCTGATATGTGTCCAACAAGCGTAGGAGTGTCGGAGTCTTTATTGGGCATTTAGCAAAAACCAAACTAAAGTGTATTTTCATCTTATTATATACATGTGTGTGTGAGAGATGCAATAAAAAATTACAAAGGGTGTATGAGAAAGAGAAAGCAGCATATAGACCCAAACTTAGAATTAATTTTACACATGGAGCTCCAATCCAAGAGAAGTATCCACGATGCAGATAGCAAGTAGTGGATGCTAATAAAGGAAATGGTGGATATAAGAATATTCCATCAATATGAATAGAATGTCTTAAAGTTTAGAAGAATTTTTTTATCAGTGTTTTATATGGATGGAAGTTGGAGGTCTTACTTGAGTTTGGAAGCGCTTCTTACATTAAAGTTACCTCAGTAATTTTAATTTTAAGGAGGTGTTCCGGAGTTTGCCCTTTAGAGAGTAGGGTAAGTTTTGTGGCACATAAGTTTTTTTTTTATGTTTTGTGGGGAGCTTGGCTCAAGAGTAACAATAAGTTTTTTAGAGAGCTGGAGAGGTCCCATGAGGAGGTTTAAGAGGTGCTGAGTTTTAATAGATTGTGGGCGTTCGGTTTTGAGTTTTGTAATTATGGTCTTAGTTCGATTTTGAGTTTTGTAACTTTTGTTGGTCACCTCTTTTTGTTGGGTTTTTTTTTTTGTATGCCTTGTATATTCTTACATTTGTCTCATTGAAAGCTTGGTTTCTCACCCGAAAAGAAAGAAAAGAAAGAAAGAGAGAGAGAGAGAGAGAGAGTAACAACTCATTCCCCCTGCCTCTATGTTATTTCAGTTTTCTTTTGCATTTGTCTTATCTTGGATCCTTGTCTATAATCCTCTCTTCTTGCTTCTTCAACTCTTTTTTTAATGTTTTCATTTATTTTTTTGTTTTAAAATTTAATGTGCAGGCACATTACACGTAA

mRNA sequence

ATGGGACCAGGAGTCCCCTTGTCTGGCGCAGCAAAACAGGCTGAGATTCTCAGGAAGAAGGGAACCACTATTTTCAAAAGGGTCGAATTGGAGCTGCCATTGAAGCTTATACCGAGATCGAATCATTTCATTGTGGCGTTCTTGAGCTATTACACTATGCCCCTGGTTCCTGTGTACTTGACGAACCGTGCGTTGTGTCATCGCAAGCGGAATGATTGGAAGAAGGTGGAGGAGGATTGTCGGAGAGCTATTCAGCTTGATAGCAGTTCTGTAAAGGCACATTACACGTAA

Coding sequence (CDS)

ATGGGACCAGGAGTCCCCTTGTCTGGCGCAGCAAAACAGGCTGAGATTCTCAGGAAGAAGGGAACCACTATTTTCAAAAGGGTCGAATTGGAGCTGCCATTGAAGCTTATACCGAGATCGAATCATTTCATTGTGGCGTTCTTGAGCTATTACACTATGCCCCTGGTTCCTGTGTACTTGACGAACCGTGCGTTGTGTCATCGCAAGCGGAATGATTGGAAGAAGGTGGAGGAGGATTGTCGGAGAGCTATTCAGCTTGATAGCAGTTCTGTAAAGGCACATTACACGTAA

Protein sequence

MGPGVPLSGAAKQAEILRKKGTTIFKRVELELPLKLIPRSNHFIVAFLSYYTMPLVPVYLTNRALCHRKRNDWKKVEEDCRRAIQLDSSSVKAHYT

Homology

[Close]

BLAST of PI0014893 vs. ExPASy Swiss-Prot
Match: Q9SRS9 (E3 ubiquitin-protein ligase CHIP OS=Arabidopsis thaliana OX=3702 GN=CHIP PE=1 SV=1)

HSP 1 Score: 73.2 bits (178), Expect = 1.8e-12
Identity = 42/87 (48.28%), Postives = 50/87 (57.47%), Query Frame = 0


Query: 10 AAKQAEILRKKGTTIFKRVELELPLKLIPRSNHFIVAFLSYYTM-PLVPVYLTNRALCHR 69
          A+  AE L++ G   FK+           R    I A+     + P VP Y TNRALCH 
Sbjct: 6  ASAMAERLKEDGNNCFKK----------ERFGAAIDAYTEAIALSPNVPAYWTNRALCHM 65

Query: 70 KRNDWKKVEEDCRRAIQLDSSSVKAHY 96
          KR DW KVEEDCR+AIQL  +SVKAHY
Sbjct: 66 KRKDWTKVEEDCRKAIQLVHNSVKAHY 82

[Close]

BLAST of PI0014893 vs. ExPASy Swiss-Prot
Match: Q9UNE7 (E3 ubiquitin-protein ligase CHIP OS=Homo sapiens OX=9606 GN=STUB1 PE=1 SV=2)

HSP 1 Score: 53.9 bits (128), Expect = 1.2e-06
Identity = 24/42 (57.14%), Postives = 30/42 (71.43%), Query Frame = 0


Query: 54 PLVPVYLTNRALCHRKRNDWKKVEEDCRRAIQLDSSSVKAHY 96
          PLV VY TNRALC+ K    ++   DCRRA++LD  SVKAH+
Sbjct: 57 PLVAVYYTNRALCYLKMQQHEQALADCRRALELDGQSVKAHF 98

[Close]

BLAST of PI0014893 vs. ExPASy Swiss-Prot
Match: Q5ZHY5 (E3 ubiquitin-protein ligase CHIP OS=Gallus gallus OX=9031 GN=STUB1 PE=2 SV=1)

HSP 1 Score: 53.5 bits (127), Expect = 1.5e-06
Identity = 24/42 (57.14%), Postives = 29/42 (69.05%), Query Frame = 0


Query: 54  PLVPVYLTNRALCHRKRNDWKKVEEDCRRAIQLDSSSVKAHY 96
           PLV VY TNRALC+ K     K   DC+RA++LD  SVKAH+
Sbjct: 67  PLVAVYYTNRALCYLKMQQHDKALADCKRALELDGQSVKAHF 108

[Close]

BLAST of PI0014893 vs. ExPASy Swiss-Prot
Match: Q9WUD1 (E3 ubiquitin-protein ligase CHIP OS=Mus musculus OX=10090 GN=Stub1 PE=1 SV=1)

HSP 1 Score: 53.1 bits (126), Expect = 2.0e-06
Identity = 24/42 (57.14%), Postives = 30/42 (71.43%), Query Frame = 0


Query: 54 PLVPVYLTNRALCHRKRNDWKKVEEDCRRAIQLDSSSVKAHY 96
          PLV VY TNRALC+ K    ++   DCRRA++LD  SVKAH+
Sbjct: 58 PLVAVYYTNRALCYLKMQQPEQALADCRRALELDGQSVKAHF 99

[Close]

BLAST of PI0014893 vs. ExPASy TrEMBL
Match: A0A0A0LBQ5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G634310 PE=4 SV=1)

HSP 1 Score: 116.7 bits (291), Expect = 5.3e-23
Identity = 64/96 (66.67%), Postives = 68/96 (70.83%), Query Frame = 0


Query: 1  MGPGVPLSGAAKQAEILRKKGTTIFKRVELELPLKLIPRSNHFIVAFLSYYTM-PLVPVY 60
          MGPGVPLSG AKQAEILRK G   F++           R    I A+    T+ P VPVY
Sbjct: 1  MGPGVPLSGPAKQAEILRKDGNHYFQK----------GRIGAAIEAYTEAITLCPNVPVY 60

Query: 61 LTNRALCHRKRNDWKKVEEDCRRAIQLDSSSVKAHY 96
          LTNRALCHRKRNDW KVEEDCRRAIQLDSSSVKAHY
Sbjct: 61 LTNRALCHRKRNDWNKVEEDCRRAIQLDSSSVKAHY 86

[Close]

BLAST of PI0014893 vs. ExPASy TrEMBL
Match: A0A6J1DYV8 (E3 ubiquitin-protein ligase CHIP OS=Momordica charantia OX=3673 GN=LOC111025874 PE=4 SV=1)

HSP 1 Score: 114.4 bits (285), Expect = 2.7e-22
Identity = 61/96 (63.54%), Postives = 70/96 (72.92%), Query Frame = 0


Query: 1  MGPGVPLSGAAKQAEILRKKGTTIFKRVELELPLKLIPRSNHFIVAFLSYYTM-PLVPVY 60
          MGPGV LSGAAKQAE+LRK G   F++  L   ++          A+    T+ P VPVY
Sbjct: 1  MGPGVALSGAAKQAELLRKDGNHYFQKGRLGAAIE----------AYTEAITLCPNVPVY 60

Query: 61 LTNRALCHRKRNDWKKVEEDCRRAIQLDSSSVKAHY 96
          LTNRALCHRKRNDWKKVEEDCRRAIQLD++SVKAHY
Sbjct: 61 LTNRALCHRKRNDWKKVEEDCRRAIQLDTNSVKAHY 86

[Close]

BLAST of PI0014893 vs. ExPASy TrEMBL
Match: A0A6J1HQG3 (E3 ubiquitin-protein ligase CHIP-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111466868 PE=4 SV=1)

HSP 1 Score: 112.8 bits (281), Expect = 7.7e-22
Identity = 62/96 (64.58%), Postives = 69/96 (71.88%), Query Frame = 0


Query: 1  MGPGVPLSGAAKQAEILRKKGTTIFKRVELELPLKLIPRSNHFIVAFLSYYTM-PLVPVY 60
          MGPGV LSGAA+QAEILRK G   F++           R    I A+    T+ P VPVY
Sbjct: 1  MGPGVFLSGAARQAEILRKDGNHYFQK----------GRIGAAIEAYTEAITLCPNVPVY 60

Query: 61 LTNRALCHRKRNDWKKVEEDCRRAIQLDSSSVKAHY 96
          LTNRALCHRKRNDWKKVEEDCRRAIQLD++SVKAHY
Sbjct: 61 LTNRALCHRKRNDWKKVEEDCRRAIQLDNNSVKAHY 86

[Close]

BLAST of PI0014893 vs. ExPASy TrEMBL
Match: A0A6J1HID6 (E3 ubiquitin-protein ligase CHIP-like OS=Cucurbita moschata OX=3662 GN=LOC111463871 PE=4 SV=1)

HSP 1 Score: 112.8 bits (281), Expect = 7.7e-22
Identity = 62/96 (64.58%), Postives = 69/96 (71.88%), Query Frame = 0


Query: 1  MGPGVPLSGAAKQAEILRKKGTTIFKRVELELPLKLIPRSNHFIVAFLSYYTM-PLVPVY 60
          MGPGV LSGAA+QAEILRK G   F++           R    I A+    T+ P VPVY
Sbjct: 1  MGPGVFLSGAARQAEILRKDGNHYFQK----------GRIGAAIEAYTEAITLCPNVPVY 60

Query: 61 LTNRALCHRKRNDWKKVEEDCRRAIQLDSSSVKAHY 96
          LTNRALCHRKRNDWKKVEEDCRRAIQLD++SVKAHY
Sbjct: 61 LTNRALCHRKRNDWKKVEEDCRRAIQLDNNSVKAHY 86

[Close]

BLAST of PI0014893 vs. ExPASy TrEMBL
Match: A0A6J1K6X7 (E3 ubiquitin-protein ligase CHIP-like OS=Cucurbita maxima OX=3661 GN=LOC111491225 PE=4 SV=1)

HSP 1 Score: 105.5 bits (262), Expect = 1.2e-19
Identity = 60/97 (61.86%), Postives = 67/97 (69.07%), Query Frame = 0


Query: 1  MGPG-VPLSGAAKQAEILRKKGTTIFKRVELELPLKLIPRSNHFIVAFLSYYTM-PLVPV 60
          MGPG V LSGAAKQAE+LRK G   F++           R    I A+    T+ P V V
Sbjct: 1  MGPGFVALSGAAKQAELLRKDGNHYFQK----------GRIGAAIEAYTEAITLCPNVAV 60

Query: 61 YLTNRALCHRKRNDWKKVEEDCRRAIQLDSSSVKAHY 96
          YLTNRALCHRKRNDWKKVEEDCRRAIQ+DS+SVK HY
Sbjct: 61 YLTNRALCHRKRNDWKKVEEDCRRAIQIDSNSVKGHY 87

[Close]

BLAST of PI0014893 vs. NCBI nr
Match: XP_038886937.1 (E3 ubiquitin-protein ligase CHIP isoform X1 [Benincasa hispida])

HSP 1 Score: 116.7 bits (291), Expect = 1.1e-22
Identity = 64/96 (66.67%), Postives = 69/96 (71.88%), Query Frame = 0


Query: 1  MGPGVPLSGAAKQAEILRKKGTTIFKRVELELPLKLIPRSNHFIVAFLSYYTM-PLVPVY 60
          MGPGV LSGAAKQAE+LRK G   F++           R    I A+    T+ P VPVY
Sbjct: 1  MGPGVALSGAAKQAELLRKDGNHYFQK----------GRIGAAIEAYTEAITLCPNVPVY 60

Query: 61 LTNRALCHRKRNDWKKVEEDCRRAIQLDSSSVKAHY 96
          LTNRALCHRKRNDWKKVEEDCRRAIQLDSSSVKAHY
Sbjct: 61 LTNRALCHRKRNDWKKVEEDCRRAIQLDSSSVKAHY 86

[Close]

BLAST of PI0014893 vs. NCBI nr
Match: XP_004144393.1 (E3 ubiquitin-protein ligase CHIP isoform X1 [Cucumis sativus] >KGN58379.1 hypothetical protein Csa_002406 [Cucumis sativus])

HSP 1 Score: 116.7 bits (291), Expect = 1.1e-22
Identity = 64/96 (66.67%), Postives = 68/96 (70.83%), Query Frame = 0


Query: 1  MGPGVPLSGAAKQAEILRKKGTTIFKRVELELPLKLIPRSNHFIVAFLSYYTM-PLVPVY 60
          MGPGVPLSG AKQAEILRK G   F++           R    I A+    T+ P VPVY
Sbjct: 1  MGPGVPLSGPAKQAEILRKDGNHYFQK----------GRIGAAIEAYTEAITLCPNVPVY 60

Query: 61 LTNRALCHRKRNDWKKVEEDCRRAIQLDSSSVKAHY 96
          LTNRALCHRKRNDW KVEEDCRRAIQLDSSSVKAHY
Sbjct: 61 LTNRALCHRKRNDWNKVEEDCRRAIQLDSSSVKAHY 86

[Close]

BLAST of PI0014893 vs. NCBI nr
Match: XP_022159463.1 (E3 ubiquitin-protein ligase CHIP [Momordica charantia])

HSP 1 Score: 114.4 bits (285), Expect = 5.5e-22
Identity = 61/96 (63.54%), Postives = 70/96 (72.92%), Query Frame = 0


Query: 1  MGPGVPLSGAAKQAEILRKKGTTIFKRVELELPLKLIPRSNHFIVAFLSYYTM-PLVPVY 60
          MGPGV LSGAAKQAE+LRK G   F++  L   ++          A+    T+ P VPVY
Sbjct: 1  MGPGVALSGAAKQAELLRKDGNHYFQKGRLGAAIE----------AYTEAITLCPNVPVY 60

Query: 61 LTNRALCHRKRNDWKKVEEDCRRAIQLDSSSVKAHY 96
          LTNRALCHRKRNDWKKVEEDCRRAIQLD++SVKAHY
Sbjct: 61 LTNRALCHRKRNDWKKVEEDCRRAIQLDTNSVKAHY 86

[Close]

BLAST of PI0014893 vs. NCBI nr
Match: XP_023553676.1 (E3 ubiquitin-protein ligase CHIP-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 112.8 bits (281), Expect = 1.6e-21
Identity = 62/96 (64.58%), Postives = 69/96 (71.88%), Query Frame = 0


Query: 1  MGPGVPLSGAAKQAEILRKKGTTIFKRVELELPLKLIPRSNHFIVAFLSYYTM-PLVPVY 60
          MGPGV LSGAA+QAEILRK G   F++           R    I A+    T+ P VPVY
Sbjct: 1  MGPGVFLSGAARQAEILRKDGNHYFQK----------GRIGAAIEAYTEAITLCPNVPVY 60

Query: 61 LTNRALCHRKRNDWKKVEEDCRRAIQLDSSSVKAHY 96
          LTNRALCHRKRNDWKKVEEDCRRAIQLD++SVKAHY
Sbjct: 61 LTNRALCHRKRNDWKKVEEDCRRAIQLDNNSVKAHY 86

[Close]

BLAST of PI0014893 vs. NCBI nr
Match: XP_022963575.1 (E3 ubiquitin-protein ligase CHIP-like [Cucurbita moschata] >KAG6571597.1 E3 ubiquitin-protein ligase CHIP, partial [Cucurbita argyrosperma subsp. sororia] >KAG7011340.1 E3 ubiquitin-protein ligase CHIP, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 112.8 bits (281), Expect = 1.6e-21
Identity = 62/96 (64.58%), Postives = 69/96 (71.88%), Query Frame = 0


Query: 1  MGPGVPLSGAAKQAEILRKKGTTIFKRVELELPLKLIPRSNHFIVAFLSYYTM-PLVPVY 60
          MGPGV LSGAA+QAEILRK G   F++           R    I A+    T+ P VPVY
Sbjct: 1  MGPGVFLSGAARQAEILRKDGNHYFQK----------GRIGAAIEAYTEAITLCPNVPVY 60

Query: 61 LTNRALCHRKRNDWKKVEEDCRRAIQLDSSSVKAHY 96
          LTNRALCHRKRNDWKKVEEDCRRAIQLD++SVKAHY
Sbjct: 61 LTNRALCHRKRNDWKKVEEDCRRAIQLDNNSVKAHY 86

[Close]

BLAST of PI0014893 vs. TAIR 10
Match: AT3G07370.1 (carboxyl terminus of HSC70-interacting protein )

HSP 1 Score: 73.2 bits (178), Expect = 1.3e-13
Identity = 42/87 (48.28%), Postives = 50/87 (57.47%), Query Frame = 0


Query: 10 AAKQAEILRKKGTTIFKRVELELPLKLIPRSNHFIVAFLSYYTM-PLVPVYLTNRALCHR 69
          A+  AE L++ G   FK+           R    I A+     + P VP Y TNRALCH 
Sbjct: 6  ASAMAERLKEDGNNCFKK----------ERFGAAIDAYTEAIALSPNVPAYWTNRALCHM 65

Query: 70 KRNDWKKVEEDCRRAIQLDSSSVKAHY 96
          KR DW KVEEDCR+AIQL  +SVKAHY
Sbjct: 66 KRKDWTKVEEDCRKAIQLVHNSVKAHY 82

The following BLAST results are available for this feature:

BLAST of PI0014893 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SRS9	1.8e-12	48.28	E3 ubiquitin-protein ligase CHIP OS=Arabidopsis thaliana OX=3702 GN=CHIP PE=1 SV...	[more]
Q9UNE7	1.2e-06	57.14	E3 ubiquitin-protein ligase CHIP OS=Homo sapiens OX=9606 GN=STUB1 PE=1 SV=2	[more]
Q5ZHY5	1.5e-06	57.14	E3 ubiquitin-protein ligase CHIP OS=Gallus gallus OX=9031 GN=STUB1 PE=2 SV=1	[more]
Q9WUD1	2.0e-06	57.14	E3 ubiquitin-protein ligase CHIP OS=Mus musculus OX=10090 GN=Stub1 PE=1 SV=1	[more]

BLAST of PI0014893 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LBQ5	5.3e-23	66.67	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G634310 PE=4 SV=1	[more]
A0A6J1DYV8	2.7e-22	63.54	E3 ubiquitin-protein ligase CHIP OS=Momordica charantia OX=3673 GN=LOC111025874 ...	[more]
A0A6J1HQG3	7.7e-22	64.58	E3 ubiquitin-protein ligase CHIP-like isoform X1 OS=Cucurbita maxima OX=3661 GN=...	[more]
A0A6J1HID6	7.7e-22	64.58	E3 ubiquitin-protein ligase CHIP-like OS=Cucurbita moschata OX=3662 GN=LOC111463...	[more]
A0A6J1K6X7	1.2e-19	61.86	E3 ubiquitin-protein ligase CHIP-like OS=Cucurbita maxima OX=3661 GN=LOC11149122...	[more]

BLAST of PI0014893 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038886937.1	1.1e-22	66.67	E3 ubiquitin-protein ligase CHIP isoform X1 [Benincasa hispida]	[more]
XP_004144393.1	1.1e-22	66.67	E3 ubiquitin-protein ligase CHIP isoform X1 [Cucumis sativus] >KGN58379.1 hypoth...	[more]
XP_022159463.1	5.5e-22	63.54	E3 ubiquitin-protein ligase CHIP [Momordica charantia]	[more]
XP_023553676.1	1.6e-21	64.58	E3 ubiquitin-protein ligase CHIP-like isoform X1 [Cucurbita pepo subsp. pepo]	[more]
XP_022963575.1	1.6e-21	64.58	E3 ubiquitin-protein ligase CHIP-like [Cucurbita moschata] >KAG6571597.1 E3 ubiq...	[more]

BLAST of PI0014893 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G07370.1	1.3e-13	48.28	carboxyl terminus of HSC70-interacting protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR019734	Tetratricopeptide repeat	SMART	SM00028	tpr_5	coord: 57..90 e-value: 5.3E-4 score: 29.3
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 10..96 e-value: 2.9E-10 score: 42.1
IPR011990	Tetratricopeptide-like helical domain superfamily	SUPERFAMILY	48452	TPR-like	coord: 52..95
None	No IPR available	PANTHER	PTHR46803:SF3	OS08G0113300 PROTEIN	coord: 9..95
None	No IPR available	PANTHER	PTHR46803	E3 UBIQUITIN-PROTEIN LIGASE CHIP	coord: 9..95

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0014893.1	PI0014893.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0071218	cellular response to misfolded protein
biological_process	GO:0045862	positive regulation of proteolysis
biological_process	GO:0043161	proteasome-mediated ubiquitin-dependent protein catabolic process
biological_process	GO:0000209	protein polyubiquitination
biological_process	GO:0006515	protein quality control for misfolded or incompletely synthesized proteins
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0051087	chaperone binding
molecular_function	GO:0061630	ubiquitin protein ligase activity
molecular_function	GO:0005515	protein binding