PI0014813 (gene) Melon (PI 482460) v1

Overview


Name	PI0014813
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	RING-type domain-containing protein
Location	chr01: 4275987 .. 4276373 (-)
RNA-Seq Expression	PI0014813
Synteny	PI0014813

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATAGGCATGGCATTATGTAGAGGTTCAATGTCCATGGCCACCATTGTCTTCTTAACTTGTGTGTGGATCCCTTTGAGCCAACTGAAGGCAGCCATTGCGAGCATGTTCGACATTCTATCGGGTCGGACATGTCAGATGCTCACGACAGCGTCGCTGCCTTGTGAGGTAAAACTTCTGGTTTGTAGGTTTGAAGAGCTGCAGTGCAGTGTTGGATCGGAGGAGGAAATTTGCTCCGTTTGCTTGACGGAGTTCACCGGAGAACATTTGGTGAGCCAATTGCATAGATGTAGCCATGTTTTCCATCTAGAATGTATTGAGAGTTGGCTACAAAGAAACCAATTTACCTGCCCTCTCTGCAGATCCTTCATCTTCCAAGCATTGTGA

mRNA sequence

ATGATAGGCATGGCATTATGTAGAGGTTCAATGTCCATGGCCACCATTGTCTTCTTAACTTGTGTGTGGATCCCTTTGAGCCAACTGAAGGCAGCCATTGCGAGCATGTTCGACATTCTATCGGGTCGGACATGTCAGATGCTCACGACAGCGTCGCTGCCTTGTGAGGTAAAACTTCTGGTTTGTAGGTTTGAAGAGCTGCAGTGCAGTGTTGGATCGGAGGAGGAAATTTGCTCCGTTTGCTTGACGGAGTTCACCGGAGAACATTTGGTGAGCCAATTGCATAGATGTAGCCATGTTTTCCATCTAGAATGTATTGAGAGTTGGCTACAAAGAAACCAATTTACCTGCCCTCTCTGCAGATCCTTCATCTTCCAAGCATTGTGA

Coding sequence (CDS)

ATGATAGGCATGGCATTATGTAGAGGTTCAATGTCCATGGCCACCATTGTCTTCTTAACTTGTGTGTGGATCCCTTTGAGCCAACTGAAGGCAGCCATTGCGAGCATGTTCGACATTCTATCGGGTCGGACATGTCAGATGCTCACGACAGCGTCGCTGCCTTGTGAGGTAAAACTTCTGGTTTGTAGGTTTGAAGAGCTGCAGTGCAGTGTTGGATCGGAGGAGGAAATTTGCTCCGTTTGCTTGACGGAGTTCACCGGAGAACATTTGGTGAGCCAATTGCATAGATGTAGCCATGTTTTCCATCTAGAATGTATTGAGAGTTGGCTACAAAGAAACCAATTTACCTGCCCTCTCTGCAGATCCTTCATCTTCCAAGCATTGTGA

Protein sequence

MIGMALCRGSMSMATIVFLTCVWIPLSQLKAAIASMFDILSGRTCQMLTTASLPCEVKLLVCRFEELQCSVGSEEEICSVCLTEFTGEHLVSQLHRCSHVFHLECIESWLQRNQFTCPLCRSFIFQAL

Homology

[Close]

BLAST of PI0014813 vs. ExPASy Swiss-Prot
Match: Q9SZL4 (RING-H2 finger protein ATL18 OS=Arabidopsis thaliana OX=3702 GN=ATL18 PE=2 SV=1)

HSP 1 Score: 77.0 bits (188), Expect = 1.7e-13
Identity = 50/125 (40.00%), Postives = 61/125 (48.80%), Query Frame = 0


Query: 1   MIGMALCRGSMSMATIVFLTCVWIPLSQLKAAIASMFDILSGRTCQMLTTASLPCEVKLL 60
           MI M   R  +  A IVF TCV IPL +LK                    A       L+
Sbjct: 1   MISMLFPRSPLCTAAIVFYTCVCIPLGRLKKNGGD-------------ADAHDDDGYNLV 60

Query: 61  VCRFEELQCSVGSEEEI-CSVCLTEFTGEHLVSQLHRCSHVFHLECIESWLQRNQFTCPL 120
              F + +     EEEI C +CL EF  E  V+ L RC+H+FH+ CIE WL R   TCPL
Sbjct: 61  GVMFGDKE----KEEEICCPICLVEFEAEDAVTHLPRCAHLFHINCIEPWLLRGHLTCPL 108

Query: 121 CRSFI 125
           CRSF+
Sbjct: 121 CRSFV 108

[Close]

BLAST of PI0014813 vs. ExPASy Swiss-Prot
Match: Q9XF92 (Brassinosteroid-responsive RING protein 1 OS=Arabidopsis thaliana OX=3702 GN=BRH1 PE=2 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 1.3e-10
Identity = 30/64 (46.88%), Postives = 39/64 (60.94%), Query Frame = 0


Query: 59  LLVCRFEELQCSVGSEEEICSVCLTEFTGEHLVSQLHRCSHVFHLECIESWLQRNQFTCP 118
           L V +FEEL  S     E C+VCL EF GE  +  L  C H+FH  C++ W+  +Q TCP
Sbjct: 75  LPVIKFEELTNSGEDLPENCAVCLYEFEGEQEIRWLRNCRHIFHRSCLDRWMDHDQKTCP 134

Query: 119 LCRS 123
           LCR+
Sbjct: 135 LCRT 138

[Close]

BLAST of PI0014813 vs. ExPASy Swiss-Prot
Match: Q8RX29 (RING-H2 finger protein ATL70 OS=Arabidopsis thaliana OX=3702 GN=ATL70 PE=2 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 4.3e-09
Identity = 23/45 (51.11%), Postives = 37/45 (82.22%), Query Frame = 0


Query: 78  CSVCLTEFTGEHLVSQLHRCSHVFHLECIESWLQRNQFTCPLCRS 123
           C++CL ++ G+HL+ QL  C+H+FHL+CI++WL+ N  TCP+CR+
Sbjct: 147 CAICLGDYKGKHLLRQLPDCNHLFHLKCIDTWLRLNP-TCPVCRT 190

[Close]

BLAST of PI0014813 vs. ExPASy Swiss-Prot
Match: Q9FHG8 (Putative RING-H2 finger protein ATL50 OS=Arabidopsis thaliana OX=3702 GN=ATL50 PE=3 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 9.6e-09
Identity = 26/44 (59.09%), Postives = 32/44 (72.73%), Query Frame = 0


Query: 78  CSVCLTEFTGEHLVSQLHRCSHVFHLECIESWLQRNQFTCPLCR 122
           C+VCL EFT E  +  L +CSH FH+ECI++WL  N  TCPLCR
Sbjct: 122 CAVCLREFTAEDELRLLPKCSHAFHVECIDTWLLTNS-TCPLCR 164

[Close]

BLAST of PI0014813 vs. ExPASy Swiss-Prot
Match: Q9FL07 (RING-H2 finger protein ATL46 OS=Arabidopsis thaliana OX=3702 GN=ATL46 PE=2 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 1.3e-08
Identity = 26/48 (54.17%), Postives = 33/48 (68.75%), Query Frame = 0


Query: 78  CSVCLTEFTGEHLVSQLHRCSHVFHLECIESWLQRNQFTCPLCRSFIF 126
           C+VCL EF+ +  +  L  CSH FHL CI++WLQ N  TCPLCR  +F
Sbjct: 143 CAVCLCEFSEKDKLRLLPMCSHAFHLNCIDTWLQSNS-TCPLCRGTLF 189

[Close]

BLAST of PI0014813 vs. ExPASy TrEMBL
Match: A0A0A0K513 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G029960 PE=4 SV=1)

HSP 1 Score: 248.8 bits (634), Expect = 1.2e-62
Identity = 123/128 (96.09%), Postives = 125/128 (97.66%), Query Frame = 0


Query: 1   MIGMALCRGSMSMATIVFLTCVWIPLSQLKAAIASMFDILSGRTCQMLTTASLPCEVKLL 60
           MIGMALCRGSMSMATIVFLTCVWIPLSQLKAAI+SMFDILSGRTCQMLTTASLPCEVKLL
Sbjct: 29  MIGMALCRGSMSMATIVFLTCVWIPLSQLKAAISSMFDILSGRTCQMLTTASLPCEVKLL 88

Query: 61  VCRFEELQCSVGSEEEICSVCLTEFTGEHLVSQLHRCSHVFHLECIESWLQRNQFTCPLC 120
           VCRFEELQ +VGSEEEICSVCLTEFT EHLVSQLHRCSHVFHLECIESWLQRNQFTCPLC
Sbjct: 89  VCRFEELQRAVGSEEEICSVCLTEFTREHLVSQLHRCSHVFHLECIESWLQRNQFTCPLC 148

Query: 121 RSFIFQAL 129
           RSFIFQ L
Sbjct: 149 RSFIFQPL 156

[Close]

BLAST of PI0014813 vs. ExPASy TrEMBL
Match: A0A5D3D5G1 (AP-1 complex subunit sigma-2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold945G00010 PE=3 SV=1)

HSP 1 Score: 139.0 bits (349), Expect = 1.3e-29
Identity = 71/81 (87.65%), Postives = 75/81 (92.59%), Query Frame = 0


Query: 11 MSMATIVFLTCVWIPLSQLKAAIASMFDILSGRTCQMLTTASLPCEVKLLVCRFEELQCS 70
          MSMAT+VFLTCVWIPLSQLKAAIASMFDILSGRTC MLTT  +PCEVKLLVCRFEELQ  
Sbjct: 1  MSMATVVFLTCVWIPLSQLKAAIASMFDILSGRTCPMLTT--VPCEVKLLVCRFEELQRG 60

Query: 71 VGSEEEICSVCLTEFTGEHLV 92
          VGSEEEICS+CLTEFT EHL+
Sbjct: 61 VGSEEEICSICLTEFTREHLI 79

[Close]

BLAST of PI0014813 vs. ExPASy TrEMBL
Match: A0A0B2QNV8 (RING-H2 finger protein ATL18 OS=Glycine soja OX=3848 GN=D0Y65_053684 PE=4 SV=1)

HSP 1 Score: 118.2 bits (295), Expect = 2.5e-23
Identity = 62/123 (50.41%), Postives = 82/123 (66.67%), Query Frame = 0


Query: 6   LCRGSMSMATIVFLTCVWIPLSQLKAAIASMFDILSGRTCQMLTTASLPCEVKLLVCRFE 65
           +C+  + + TIVF TC+ IPL +LK A+ASMF + S  T  M      P    L V R+E
Sbjct: 6   VCQSRLWVVTIVFYTCILIPLMKLKRALASMF-LFSCETKGMAKEMEFPEIPSLPVARYE 65

Query: 66  ELQ---CSVGSEEEICSVCLTEFTGEHLVSQLHRCSHVFHLECIESWLQRNQFTCPLCRS 125
           +L+   C  G ++EICS+CL E+ GE  VS+L RC HVFHL CI+ W+ RNQF+CPLCRS
Sbjct: 66  DLKGHNCD-GEKQEICSICLVEYEGEDAVSKLGRCGHVFHLNCIDQWILRNQFSCPLCRS 125

[Close]

BLAST of PI0014813 vs. ExPASy TrEMBL
Match: K7N2N2 (RING-type domain-containing protein OS=Glycine max OX=3847 GN=GLYMA_20G099800 PE=4 SV=1)

HSP 1 Score: 118.2 bits (295), Expect = 2.5e-23
Identity = 62/123 (50.41%), Postives = 82/123 (66.67%), Query Frame = 0


Query: 6   LCRGSMSMATIVFLTCVWIPLSQLKAAIASMFDILSGRTCQMLTTASLPCEVKLLVCRFE 65
           +C+  + + TIVF TC+ IPL +LK A+ASMF + S  T  M      P    L V R+E
Sbjct: 6   VCQSRLWVVTIVFYTCILIPLMKLKRALASMF-LFSCETKGMAKEMEFPEIPSLPVARYE 65

Query: 66  ELQ---CSVGSEEEICSVCLTEFTGEHLVSQLHRCSHVFHLECIESWLQRNQFTCPLCRS 125
           +L+   C  G ++EICS+CL E+ GE  VS+L RC HVFHL CI+ W+ RNQF+CPLCRS
Sbjct: 66  DLKGHNCD-GEKQEICSICLVEYEGEDAVSKLGRCGHVFHLNCIDQWILRNQFSCPLCRS 125

[Close]

BLAST of PI0014813 vs. ExPASy TrEMBL
Match: A0A6P6AC29 (RING-H2 finger protein ATL18-like OS=Durio zibethinus OX=66656 GN=LOC111308378 PE=4 SV=1)

HSP 1 Score: 117.5 bits (293), Expect = 4.2e-23
Identity = 62/138 (44.93%), Postives = 83/138 (60.14%), Query Frame = 0


Query: 1   MIGMALCRGSMSMATIVFLTCVWIPLSQLKAAIASMFDIL-----SGRTCQMLTTASLPC 60
           MI +      +S A ++F TCVWIP  QLK A+  +   +     +  +CQ++       
Sbjct: 1   MISLMCSNSDLSTAALIFYTCVWIPYLQLKKALLRVLGFVFPWYQAEESCQVM------- 60

Query: 61  EVKLLVCRFEELQCSVGSE--------EEICSVCLTEFTGEHLVSQLHRCSHVFHLECIE 120
            V L V RFE+L+ S GS         EE+CS+CL EF  E +VSQLH+C H+FH+ CIE
Sbjct: 61  NVCLPVARFEDLKLSNGSRGSTNGEEVEEVCSICLVEFEKEDVVSQLHKCGHLFHMNCIE 120

Query: 121 SWLQRNQFTCPLCRSFIF 126
            WL R+QFTCPLCRSF+F
Sbjct: 121 KWLDRDQFTCPLCRSFLF 131

[Close]

BLAST of PI0014813 vs. NCBI nr
Match: KAE8645705.1 (hypothetical protein Csa_020389 [Cucumis sativus])

HSP 1 Score: 168.7 bits (426), Expect = 3.3e-38
Identity = 86/91 (94.51%), Postives = 89/91 (97.80%), Query Frame = 0


Query: 1   MIGMALCRGSMSMATIVFLTCVWIPLSQLKAAIASMFDILSGRTCQMLTTASLPCEVKLL 60
           MIGMALCRGSMSMATIVFLTCVWIPLSQLKAAI+SMFDILSGRTCQMLTTASLPCEVKLL
Sbjct: 38  MIGMALCRGSMSMATIVFLTCVWIPLSQLKAAISSMFDILSGRTCQMLTTASLPCEVKLL 97

Query: 61  VCRFEELQCSVGSEEEICSVCLTEFTGEHLV 92
           VCRFEELQ +VGSEEEICSVCLTEFT EHL+
Sbjct: 98  VCRFEELQRAVGSEEEICSVCLTEFTREHLL 128

[Close]

BLAST of PI0014813 vs. NCBI nr
Match: KAA0050549.1 (AP-1 complex subunit sigma-2 [Cucumis melo var. makuwa] >TYK18789.1 AP-1 complex subunit sigma-2 [Cucumis melo var. makuwa])

HSP 1 Score: 139.0 bits (349), Expect = 2.8e-29
Identity = 71/81 (87.65%), Postives = 75/81 (92.59%), Query Frame = 0


Query: 11 MSMATIVFLTCVWIPLSQLKAAIASMFDILSGRTCQMLTTASLPCEVKLLVCRFEELQCS 70
          MSMAT+VFLTCVWIPLSQLKAAIASMFDILSGRTC MLTT  +PCEVKLLVCRFEELQ  
Sbjct: 1  MSMATVVFLTCVWIPLSQLKAAIASMFDILSGRTCPMLTT--VPCEVKLLVCRFEELQRG 60

Query: 71 VGSEEEICSVCLTEFTGEHLV 92
          VGSEEEICS+CLTEFT EHL+
Sbjct: 61 VGSEEEICSICLTEFTREHLI 79

[Close]

BLAST of PI0014813 vs. NCBI nr
Match: TKY50666.1 (RING-H2 finger protein ATL18 [Spatholobus suberectus])

HSP 1 Score: 119.4 bits (298), Expect = 2.3e-23
Identity = 67/135 (49.63%), Postives = 83/135 (61.48%), Query Frame = 0


Query: 1   MIGMALCRGSMSMATIVFLTCVWIPLSQLKAAIASMFDIL----SGRTCQMLTTASLPCE 60
           MI + +CR  + + TIVF TC+ IP  QLK A+ SMF  L    S  T  M      P  
Sbjct: 1   MISLVVCRSRLWVVTIVFYTCILIPSMQLKRALVSMFGRLMIFFSYETKGMAKEMEFPEI 60

Query: 61  VKLLVCRFEELQ--CSVGSE----EEICSVCLTEFTGEHLVSQLHRCSHVFHLECIESWL 120
             L V R+E+L+    VG E    +EICS+CL E+ GE  VS+L RC HVFHL CIE W+
Sbjct: 61  PSLPVARYEDLRGHSCVGGEDGERDEICSICLVEYEGEDAVSELGRCGHVFHLNCIEQWI 120

Query: 121 QRNQFTCPLCRSFIF 126
            RNQF+CPLCRSF+F
Sbjct: 121 HRNQFSCPLCRSFLF 135

[Close]

BLAST of PI0014813 vs. NCBI nr
Match: KAG4907342.1 (hypothetical protein JHK86_055826 [Glycine max] >KAG4909984.1 hypothetical protein JHK87_056100 [Glycine soja] >KHN23136.1 RING-H2 finger protein ATL18 [Glycine soja] >KRG90570.1 hypothetical protein GLYMA_20G099800v4 [Glycine max] >RZB43200.1 RING-H2 finger protein ATL18 [Glycine soja])

HSP 1 Score: 118.2 bits (295), Expect = 5.1e-23
Identity = 62/123 (50.41%), Postives = 82/123 (66.67%), Query Frame = 0


Query: 6   LCRGSMSMATIVFLTCVWIPLSQLKAAIASMFDILSGRTCQMLTTASLPCEVKLLVCRFE 65
           +C+  + + TIVF TC+ IPL +LK A+ASMF + S  T  M      P    L V R+E
Sbjct: 6   VCQSRLWVVTIVFYTCILIPLMKLKRALASMF-LFSCETKGMAKEMEFPEIPSLPVARYE 65

Query: 66  ELQ---CSVGSEEEICSVCLTEFTGEHLVSQLHRCSHVFHLECIESWLQRNQFTCPLCRS 125
           +L+   C  G ++EICS+CL E+ GE  VS+L RC HVFHL CI+ W+ RNQF+CPLCRS
Sbjct: 66  DLKGHNCD-GEKQEICSICLVEYEGEDAVSKLGRCGHVFHLNCIDQWILRNQFSCPLCRS 125

[Close]

BLAST of PI0014813 vs. NCBI nr
Match: KAG4998727.1 (hypothetical protein JHK85_030166 [Glycine max] >KAG5005504.1 hypothetical protein JHK86_029643 [Glycine max] >KAG5153300.1 hypothetical protein JHK84_029772 [Glycine max])

HSP 1 Score: 117.9 bits (294), Expect = 6.6e-23
Identity = 64/123 (52.03%), Postives = 80/123 (65.04%), Query Frame = 0


Query: 6   LCRGSMSMATIVFLTCVWIPLSQLKAAIASMFDILSGRTCQMLTTASLPCEVKLLVCRFE 65
           +C+  + + TIVF TC+ IPL QLK A+ASM  + S  T  M      P    L V RFE
Sbjct: 6   VCKSRLWVVTIVFYTCILIPLMQLKKALASMV-LFSCETKGMAKEMEFPEIPSLPVARFE 65

Query: 66  ELQ---CSVGSEEEICSVCLTEFTGEHLVSQLHRCSHVFHLECIESWLQRNQFTCPLCRS 125
           +L+   C    +EEICS+CL E+ GE  VS+L RC HVFHL CIE W+ RNQF+CPLCRS
Sbjct: 66  DLKGHNCD-EEKEEICSICLVEYEGEDAVSKLGRCGHVFHLNCIEQWILRNQFSCPLCRS 125

[Close]

BLAST of PI0014813 vs. TAIR 10
Match: AT4G38140.1 (RING/U-box superfamily protein )

HSP 1 Score: 77.0 bits (188), Expect = 1.2e-14
Identity = 50/125 (40.00%), Postives = 61/125 (48.80%), Query Frame = 0


Query: 1   MIGMALCRGSMSMATIVFLTCVWIPLSQLKAAIASMFDILSGRTCQMLTTASLPCEVKLL 60
           MI M   R  +  A IVF TCV IPL +LK                    A       L+
Sbjct: 1   MISMLFPRSPLCTAAIVFYTCVCIPLGRLKKNGGD-------------ADAHDDDGYNLV 60

Query: 61  VCRFEELQCSVGSEEEI-CSVCLTEFTGEHLVSQLHRCSHVFHLECIESWLQRNQFTCPL 120
              F + +     EEEI C +CL EF  E  V+ L RC+H+FH+ CIE WL R   TCPL
Sbjct: 61  GVMFGDKE----KEEEICCPICLVEFEAEDAVTHLPRCAHLFHINCIEPWLLRGHLTCPL 108

Query: 121 CRSFI 125
           CRSF+
Sbjct: 121 CRSFV 108

[Close]

BLAST of PI0014813 vs. TAIR 10
Match: AT3G61460.1 (brassinosteroid-responsive RING-H2 )

HSP 1 Score: 67.4 bits (163), Expect = 9.5e-12
Identity = 30/64 (46.88%), Postives = 39/64 (60.94%), Query Frame = 0


Query: 59  LLVCRFEELQCSVGSEEEICSVCLTEFTGEHLVSQLHRCSHVFHLECIESWLQRNQFTCP 118
           L V +FEEL  S     E C+VCL EF GE  +  L  C H+FH  C++ W+  +Q TCP
Sbjct: 75  LPVIKFEELTNSGEDLPENCAVCLYEFEGEQEIRWLRNCRHIFHRSCLDRWMDHDQKTCP 134

Query: 119 LCRS 123
           LCR+
Sbjct: 135 LCRT 138

[Close]

BLAST of PI0014813 vs. TAIR 10
Match: AT2G35910.1 (RING/U-box superfamily protein )

HSP 1 Score: 62.4 bits (150), Expect = 3.1e-10
Identity = 23/45 (51.11%), Postives = 37/45 (82.22%), Query Frame = 0


Query: 78  CSVCLTEFTGEHLVSQLHRCSHVFHLECIESWLQRNQFTCPLCRS 123
           C++CL ++ G+HL+ QL  C+H+FHL+CI++WL+ N  TCP+CR+
Sbjct: 147 CAICLGDYKGKHLLRQLPDCNHLFHLKCIDTWLRLNP-TCPVCRT 190

[Close]

BLAST of PI0014813 vs. TAIR 10
Match: AT1G24580.1 (RING/U-box superfamily protein )

HSP 1 Score: 61.6 bits (148), Expect = 5.2e-10
Identity = 35/109 (32.11%), Postives = 55/109 (50.46%), Query Frame = 0


Query: 24  IPLSQLKAAIASMFDILSGRTCQMLTTASLP----CEVKLLVCRFEELQCSVGSEEE--- 83
           + ++ LK  + S+F I++  T   +     P       ++ + +F+ L  ++  EEE   
Sbjct: 5   VSITLLKNMVRSVFQIVASETESSMEIDDEPEDDFVTRRISITQFKSLCENIEEEEEEKG 64

Query: 84  -ICSVCLTEFTGEHLVSQLHRCSHVFHLECIESWLQRNQFTCPLCRSFI 125
             C VCL  F  E  VS+L  C H FH  C+++W   N  TCPLCRS +
Sbjct: 65  VECCVCLCGFKEEEEVSELVSCKHFFHRACLDNWFGNNHTTCPLCRSIL 113

[Close]

BLAST of PI0014813 vs. TAIR 10
Match: AT5G57750.1 (RING/U-box superfamily protein )

HSP 1 Score: 61.2 bits (147), Expect = 6.8e-10
Identity = 26/44 (59.09%), Postives = 32/44 (72.73%), Query Frame = 0


Query: 78  CSVCLTEFTGEHLVSQLHRCSHVFHLECIESWLQRNQFTCPLCR 122
           C+VCL EFT E  +  L +CSH FH+ECI++WL  N  TCPLCR
Sbjct: 122 CAVCLREFTAEDELRLLPKCSHAFHVECIDTWLLTNS-TCPLCR 164

The following BLAST results are available for this feature:

BLAST of PI0014813 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SZL4	1.7e-13	40.00	RING-H2 finger protein ATL18 OS=Arabidopsis thaliana OX=3702 GN=ATL18 PE=2 SV=1	[more]
Q9XF92	1.3e-10	46.88	Brassinosteroid-responsive RING protein 1 OS=Arabidopsis thaliana OX=3702 GN=BRH...	[more]
Q8RX29	4.3e-09	51.11	RING-H2 finger protein ATL70 OS=Arabidopsis thaliana OX=3702 GN=ATL70 PE=2 SV=1	[more]
Q9FHG8	9.6e-09	59.09	Putative RING-H2 finger protein ATL50 OS=Arabidopsis thaliana OX=3702 GN=ATL50 P...	[more]
Q9FL07	1.3e-08	54.17	RING-H2 finger protein ATL46 OS=Arabidopsis thaliana OX=3702 GN=ATL46 PE=2 SV=1	[more]

BLAST of PI0014813 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K513	1.2e-62	96.09	RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G029960 P...	[more]
A0A5D3D5G1	1.3e-29	87.65	AP-1 complex subunit sigma-2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sca...	[more]
A0A0B2QNV8	2.5e-23	50.41	RING-H2 finger protein ATL18 OS=Glycine soja OX=3848 GN=D0Y65_053684 PE=4 SV=1	[more]
K7N2N2	2.5e-23	50.41	RING-type domain-containing protein OS=Glycine max OX=3847 GN=GLYMA_20G099800 PE...	[more]
A0A6P6AC29	4.2e-23	44.93	RING-H2 finger protein ATL18-like OS=Durio zibethinus OX=66656 GN=LOC111308378 P...	[more]

BLAST of PI0014813 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8645705.1	3.3e-38	94.51	hypothetical protein Csa_020389 [Cucumis sativus]	[more]
KAA0050549.1	2.8e-29	87.65	AP-1 complex subunit sigma-2 [Cucumis melo var. makuwa] >TYK18789.1 AP-1 complex...	[more]
TKY50666.1	2.3e-23	49.63	RING-H2 finger protein ATL18 [Spatholobus suberectus]	[more]
KAG4907342.1	5.1e-23	50.41	hypothetical protein JHK86_055826 [Glycine max] >KAG4909984.1 hypothetical prote...	[more]
KAG4998727.1	6.6e-23	52.03	hypothetical protein JHK85_030166 [Glycine max] >KAG5005504.1 hypothetical prote...	[more]

BLAST of PI0014813 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G38140.1	1.2e-14	40.00	RING/U-box superfamily protein	[more]
AT3G61460.1	9.5e-12	46.88	brassinosteroid-responsive RING-H2	[more]
AT2G35910.1	3.1e-10	51.11	RING/U-box superfamily protein	[more]
AT1G24580.1	5.2e-10	32.11	RING/U-box superfamily protein	[more]
AT5G57750.1	6.8e-10	59.09	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 78..120 e-value: 4.0E-5 score: 33.0
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 77..121 e-value: 3.6E-11 score: 43.2
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 78..121 score: 12.887609
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 72..124 e-value: 3.7E-16 score: 60.4
None	No IPR available	PANTHER	PTHR45969:SF9	ZINC FINGER, C3HC4 TYPE (RING FINGER) PROTEIN	coord: 1..126
None	No IPR available	PANTHER	PTHR45969	RING ZINC FINGER PROTEIN-RELATED	coord: 1..126
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 72..126

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0014813.1	PI0014813.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015031	protein transport
biological_process	GO:0016192	vesicle-mediated transport
cellular_component	GO:0030121	AP-1 adaptor complex
molecular_function	GO:0035615	clathrin adaptor activity