PI0014454 (gene) Melon (PI 482460) v1

Overview
NamePI0014454
Typegene
OrganismCucumis metuliferus (Melon (PI 482460) v1)
DescriptionUnknown protein
Locationchr03: 3272421 .. 3273003 (-)
RNA-Seq ExpressionPI0014454
SyntenyPI0014454
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTGAGAAAAACCCCCCGCTCAATCAATCTCCCACTGAAAACCCTAGAAATCGCCCAACAAAAACACGAACGAAGAAGGTAAGATTGAGGTGTTTTTTTTTTTTTTAAAGAACAAATGAGAGAGAAGGGAGGGGCCTTTACTTATTTCCTGGACGACTAAAAATGACACAGAAATATTCCAAAGCGGCTTGAGCTCAATACGCTCTTCCACGTGTCATTTATTCATTCGTCCAATTCTATCGTCAACTCTCTTTTTTGACTTTTCGTTGTTTTCCCGCGCGGGGGTTGGCACGTGTGGAGGTTAATCGTGGTACTTCGTCACATTCATCATTAAATCGTAATGAACCCTACTCTTATTCCAAGAGCGTCAAAAGCACTCGCTATTACTAAACGACATCGTGTTAATGGAATCCGTGAAATCCGTCGTTTTCTTGTCCGAGCGAGTGTTGTTCAAGCGCGTGCGTGAGAGAGATTCATTTCCGGAGATGGGTTGTGATAATGTGTTTACGTTTAGGGATGTAGTTTTGTCACGGACCAATGAGGAGGAGACAGGTAGGACATTGGTCAAGGTTTTTGACTAA

mRNA sequence

ATGGTGAGAAAAACCCCCCGCTCAATCAATCTCCCACTGAAAACCCTAGAAATCGCCCAACAAAAACACGAACGAAGAAGAAATATTCCAAAGCGGCTTGAGCTCAATACGCTCTTCCACGTGTCATTTATTCATTCGTCCAATTCTATCGTTAATCGTGGTACTTCGTCACATTCATCATTAAATCGTAATGAACCCTACTCTTATTCCAAGAGCCGAGTGTTGTTCAAGCGCGTGCGTGAGAGAGATTCATTTCCGGAGATGGGTTGTGATAATGTGTTTACGTTTAGGGATGTAGTTTTGTCACGGACCAATGAGGAGGAGACAGGTAGGACATTGGTCAAGGTTTTTGACTAA

Coding sequence (CDS)

ATGGTGAGAAAAACCCCCCGCTCAATCAATCTCCCACTGAAAACCCTAGAAATCGCCCAACAAAAACACGAACGAAGAAGAAATATTCCAAAGCGGCTTGAGCTCAATACGCTCTTCCACGTGTCATTTATTCATTCGTCCAATTCTATCGTTAATCGTGGTACTTCGTCACATTCATCATTAAATCGTAATGAACCCTACTCTTATTCCAAGAGCCGAGTGTTGTTCAAGCGCGTGCGTGAGAGAGATTCATTTCCGGAGATGGGTTGTGATAATGTGTTTACGTTTAGGGATGTAGTTTTGTCACGGACCAATGAGGAGGAGACAGGTAGGACATTGGTCAAGGTTTTTGACTAA

Protein sequence

MVRKTPRSINLPLKTLEIAQQKHERRRNIPKRLELNTLFHVSFIHSSNSIVNRGTSSHSSLNRNEPYSYSKSRVLFKRVRERDSFPEMGCDNVFTFRDVVLSRTNEEETGRTLVKVFD
Homology
[Close]
BLAST of PI0014454 vs. ExPASy TrEMBL
Match: A0A0A0LP26 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G372840 PE=4 SV=1)

HSP 1 Score: 160.6 bits (405), Expect = 4.0e-36
Identity = 93/149 (62.42%), Postives = 99/149 (66.44%), Query Frame = 0 

Query: 1   MVRKTPRSINLPLKTLEIAQQKHERRRNIPKRLELNTLFHVSFIHSSNSI------VNRG 60
           MVRK P     P +TLEIAQQKHERRRNIPKRLELNTLFHVS  HS N I      VNRG
Sbjct: 1   MVRKNPPLNQSPTETLEIAQQKHERRRNIPKRLELNTLFHVSLTHSLNPIGLARVEVNRG 60

Query: 61  TSSHSSLNRNEPYSYSKS-------------------------RVLFKRVRERDSFPEMG 119
           T SHSSLN NEPYSYS +                         RV FKR+R+RDSF EMG
Sbjct: 61  TLSHSSLNHNEPYSYSNTVKTTRYYQTTAFLKESVKSVVFLSERVSFKRLRDRDSFTEMG 120

[Close]
BLAST of PI0014454 vs. NCBI nr
Match: KGN62789.1 (hypothetical protein Csa_021987 [Cucumis sativus])

HSP 1 Score: 160.6 bits (405), Expect = 8.2e-36
Identity = 93/149 (62.42%), Postives = 99/149 (66.44%), Query Frame = 0 

Query: 1   MVRKTPRSINLPLKTLEIAQQKHERRRNIPKRLELNTLFHVSFIHSSNSI------VNRG 60
           MVRK P     P +TLEIAQQKHERRRNIPKRLELNTLFHVS  HS N I      VNRG
Sbjct: 1   MVRKNPPLNQSPTETLEIAQQKHERRRNIPKRLELNTLFHVSLTHSLNPIGLARVEVNRG 60

Query: 61  TSSHSSLNRNEPYSYSKS-------------------------RVLFKRVRERDSFPEMG 119
           T SHSSLN NEPYSYS +                         RV FKR+R+RDSF EMG
Sbjct: 61  TLSHSSLNHNEPYSYSNTVKTTRYYQTTAFLKESVKSVVFLSERVSFKRLRDRDSFTEMG 120

The following BLAST results are available for this feature:
BLAST of PI0014454 vs.
Match NameE-valueIdentityDescription
BLAST of PI0014454 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LP264.0e-3662.42Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G372840 PE=4 SV=1[more]
BLAST of PI0014454 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN62789.18.2e-3662.42hypothetical protein Csa_021987 [Cucumis sativus][more]
BLAST of PI0014454 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
PI0014454.1PI0014454.1mRNA