PI0014277 (gene) Melon (PI 482460) v1

Overview


Name	PI0014277
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Pentatricopeptide repeat-containing protein
Location	chr02: 4512019 .. 4513571 (-)
RNA-Seq Expression	PI0014277
Synteny	PI0014277

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCATTGAAACCTCTGAAACCCTCAATTTCAATTGCTCAATTTACCCAAATCCATGCCAAACTCCGCACAAATCCAAAACCCCATATTTTCAACCCTTTGCTCGGTTCTTTGGTAAACTCCATTTCCCCTGAAAATGGCCTCTTCCTCTACAACCAGATGCTTTGCTACCCATCTTCCCACAACCACTTCACCTTCACTTATGCCCTCAAAGCCTGTTGCCTCCTTCATCAAACCCAAAAGGGCCTCGAAATCCATGCCCATCTCATCAAATCAGGTCATCTTTCTGACATCTTCATCCAAAATTCTCTGCTCCATTTCTACATTCTCAATGGCAATGTTCCTTCTGCTTCTCTCATTTTTGATTCCATCCCCGACCCAGATGTTGTTTCTTGGACTTCAATCATTTCCGGTCTTTCCAAGCTCGGTTTTGAAAGAGAAGCTCTGAGTAAGTTCTTGTCCATGAATGTGAAACCTAATTCTACTACTCTTGTCACTGCTTTATCTGCTTGTTCTAGTCTTAGATGTCTCAAGATTGGGAAAGCTATACATGGGCTTAGATTGAGGACTTTGAATGAGGAAAATGTTAGTTTGGACAATGCCCTTCTTGATTTTTATGTTAGATGTGCGTATTTGAGGAGTGCAGAGAAGCTGTTTGAAAAAATGCCTAAAAGAGATGTAGTGTCTTGGACGACAATGATTGGGGGCTATGCACAGAGGGATTGTGTGAAGAGGCTGTGAGGGTATTTCAAAACATGATTCATGGGGGAGAGGCTATACCCAATGAAGCCACTCTAGTTAATGTATTATCTGCATGTTCTTCCATGTCTGCTCTGCATTTAGGTGAATGGGTGCATTCTTATATCAACTCTAGGCAAGATGTGACAATTGATGGAAATGTTGGAAATGCATTGATTAACATGTATGTCAAATGTGGCAACATGGAAATAGCAATTTTGATCTTCAAAGCTATTAAGCACAAGGATATCATAACATGGAGTACAATCACTAGTGGGTTAGCCATGAATGGCCTAGGAAAGCAAGCTTTTGTCCTCTTCTCACTCATGTTAGTCCATGGCATTTCTCCAGATGATATAACATTTCTCGGTTTGTTATCTGCTTGCAGTCATGGTGGGTTGATCAATCAAGGCACGATGGTGTTTGAAGCCATGAAAGATGTTTATAATATTTCACCTCAAATGAGGCATTATGCTTGTATGGTGGACATGTATGGAAAGGCTGGGCTATTGGATGAAGCAGAGGCATTCATAAAGGAGATGCCTATGGAAGCTGAAGGCCCCGTTTGGGGAGCTTTGCTTCATGCTTGTCAAATTCATGGGAATGAGAAGAAGTATGAGAAAGTTAGGGAATGGTTGCTTGGAAGTAAAGGGGTTACAGTGGGAACTTTTGCTTTGTTATCAAATACTTATGCTAGTTGTGACAGATGGGATGATGCTAATGATGTTCGAGACGCCATGAGAAATAGAGGGTTGAAGAAGATGGCTGGACGTAGTTGGATTGAATTGGTCGATCCTTTGAATCCTTTAGGTTAA

mRNA sequence

ATGCCATTGAAACCTCTGAAACCCTCAATTTCAATTGCTCAATTTACCCAAATCCATGCCAAACTCCGCACAAATCCAAAACCCCATATTTTCAACCCTTTGCTCGGTTCTTTGGTAAACTCCATTTCCCCTGAAAATGGCCTCTTCCTCTACAACCAGATGCTTTGCTACCCATCTTCCCACAACCACTTCACCTTCACTTATGCCCTCAAAGCCTGTTGCCTCCTTCATCAAACCCAAAAGGGCCTCGAAATCCATGCCCATCTCATCAAATCAGGTCATCTTTCTGACATCTTCATCCAAAATTCTCTGCTCCATTTCTACATTCTCAATGGCAATGTTCCTTCTGCTTCTCTCATTTTTGATTCCATCCCCGACCCAGATGTTGTTTCTTGGACTTCAATCATTTCCGGTCTTTCCAAGCTCGGTTTTGAAAGAGAAGCTCTGAGTAAGTTCTTGTCCATGAATGTGAAACCTAATTCTACTACTCTTGTCACTGCTTTATCTGCTTGTTCTAGTCTTAGATGTCTCAAGATTGGGAAAGCTATACATGGGCTTAGATTGAGGACTTTGAATGAGGAAAATGTTAGTTTGGACAATGCCCTTCTTGATTTTTATGTTAGATGTGCGTATTTGAGGAGTGCAGAGAAGCTGTTTGAAAAAATGCCTAAAAGAGATGTAGGATTGTGTGAAGAGGCTGTGAGGGTATTTCAAAACATGATTCATGGGGGAGAGGCTATACCCAATGAAGCCACTCTAGTTAATGTATTATCTGCATGTTCTTCCATGTCTGCTCTGCATTTAGGTGAATGGGTGCATTCTTATATCAACTCTAGGCAAGATGTGACAATTGATGGAAATGTTGGAAATGCATTGATTAACATGTATGTCAAATGTGGCAACATGGAAATAGCAATTTTGATCTTCAAAGCTATTAAGCACAAGGATATCATAACATGGAGTACAATCACTAGTGGGTTAGCCATGAATGGCCTAGGAAAGCAAGCTTTTGTCCTCTTCTCACTCATGTTAGTCCATGGCATTTCTCCAGATGATATAACATTTCTCGGTTTGTTATCTGCTTGCAGTCATGGTGGGTTGATCAATCAAGGCACGATGGTGTTTGAAGCCATGAAAGATGTTTATAATATTTCACCTCAAATGAGGCATTATGCTTGTATGGTGGACATGTATGGAAAGGCTGGGCTATTGGATGAAGCAGAGGCATTCATAAAGGAGATGCCTATGGAAGCTGAAGGCCCCGTTTGGGGAGCTTTGCTTCATGCTTGTCAAATTCATGGGAATGAGAAGAAGTATGAGAAAGTTAGGGAATGGTTGCTTGGAAGTAAAGGGGTTACAGTGGGAACTTTTGCTTTGTTATCAAATACTTATGCTAGTTGTGACAGATGGGATGATGCTAATGATGTTCGAGACGCCATGAGAAATAGAGGGTTGAAGAAGATGGCTGGACGTAGTTGGATTGAATTGGTCGATCCTTTGAATCCTTTAGGTTAA

Coding sequence (CDS)

ATGCCATTGAAACCTCTGAAACCCTCAATTTCAATTGCTCAATTTACCCAAATCCATGCCAAACTCCGCACAAATCCAAAACCCCATATTTTCAACCCTTTGCTCGGTTCTTTGGTAAACTCCATTTCCCCTGAAAATGGCCTCTTCCTCTACAACCAGATGCTTTGCTACCCATCTTCCCACAACCACTTCACCTTCACTTATGCCCTCAAAGCCTGTTGCCTCCTTCATCAAACCCAAAAGGGCCTCGAAATCCATGCCCATCTCATCAAATCAGGTCATCTTTCTGACATCTTCATCCAAAATTCTCTGCTCCATTTCTACATTCTCAATGGCAATGTTCCTTCTGCTTCTCTCATTTTTGATTCCATCCCCGACCCAGATGTTGTTTCTTGGACTTCAATCATTTCCGGTCTTTCCAAGCTCGGTTTTGAAAGAGAAGCTCTGAGTAAGTTCTTGTCCATGAATGTGAAACCTAATTCTACTACTCTTGTCACTGCTTTATCTGCTTGTTCTAGTCTTAGATGTCTCAAGATTGGGAAAGCTATACATGGGCTTAGATTGAGGACTTTGAATGAGGAAAATGTTAGTTTGGACAATGCCCTTCTTGATTTTTATGTTAGATGTGCGTATTTGAGGAGTGCAGAGAAGCTGTTTGAAAAAATGCCTAAAAGAGATGTAGGATTGTGTGAAGAGGCTGTGAGGGTATTTCAAAACATGATTCATGGGGGAGAGGCTATACCCAATGAAGCCACTCTAGTTAATGTATTATCTGCATGTTCTTCCATGTCTGCTCTGCATTTAGGTGAATGGGTGCATTCTTATATCAACTCTAGGCAAGATGTGACAATTGATGGAAATGTTGGAAATGCATTGATTAACATGTATGTCAAATGTGGCAACATGGAAATAGCAATTTTGATCTTCAAAGCTATTAAGCACAAGGATATCATAACATGGAGTACAATCACTAGTGGGTTAGCCATGAATGGCCTAGGAAAGCAAGCTTTTGTCCTCTTCTCACTCATGTTAGTCCATGGCATTTCTCCAGATGATATAACATTTCTCGGTTTGTTATCTGCTTGCAGTCATGGTGGGTTGATCAATCAAGGCACGATGGTGTTTGAAGCCATGAAAGATGTTTATAATATTTCACCTCAAATGAGGCATTATGCTTGTATGGTGGACATGTATGGAAAGGCTGGGCTATTGGATGAAGCAGAGGCATTCATAAAGGAGATGCCTATGGAAGCTGAAGGCCCCGTTTGGGGAGCTTTGCTTCATGCTTGTCAAATTCATGGGAATGAGAAGAAGTATGAGAAAGTTAGGGAATGGTTGCTTGGAAGTAAAGGGGTTACAGTGGGAACTTTTGCTTTGTTATCAAATACTTATGCTAGTTGTGACAGATGGGATGATGCTAATGATGTTCGAGACGCCATGAGAAATAGAGGGTTGAAGAAGATGGCTGGACGTAGTTGGATTGAATTGGTCGATCCTTTGAATCCTTTAGGTTAA

Protein sequence

MPLKPLKPSISIAQFTQIHAKLRTNPKPHIFNPLLGSLVNSISPENGLFLYNQMLCYPSSHNHFTFTYALKACCLLHQTQKGLEIHAHLIKSGHLSDIFIQNSLLHFYILNGNVPSASLIFDSIPDPDVVSWTSIISGLSKLGFEREALSKFLSMNVKPNSTTLVTALSACSSLRCLKIGKAIHGLRLRTLNEENVSLDNALLDFYVRCAYLRSAEKLFEKMPKRDVGLCEEAVRVFQNMIHGGEAIPNEATLVNVLSACSSMSALHLGEWVHSYINSRQDVTIDGNVGNALINMYVKCGNMEIAILIFKAIKHKDIITWSTITSGLAMNGLGKQAFVLFSLMLVHGISPDDITFLGLLSACSHGGLINQGTMVFEAMKDVYNISPQMRHYACMVDMYGKAGLLDEAEAFIKEMPMEAEGPVWGALLHACQIHGNEKKYEKVREWLLGSKGVTVGTFALLSNTYASCDRWDDANDVRDAMRNRGLKKMAGRSWIELVDPLNPLG

Homology

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BLAST of PI0014277 vs. ExPASy Swiss-Prot
Match: Q9LN01 (Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H12 PE=2 SV=1)

HSP 1 Score: 337.4 bits (864), Expect = 2.7e-91
Identity = 185/519 (35.65%), Postives = 289/519 (55.68%), Query Frame = 0


Query: 26  PKPHIFNPLLGSLVNSISPENGLFLYNQMLCYPSSHNHFTFTYALKACCLLHQTQKGLEI 85
           P   I+N +      S  P + L LY  M+      N +TF + LK+C      ++G +I
Sbjct: 97  PNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQI 156

Query: 86  HAHLIKSGHLSDIFIQNSLLHFYILNGN-------------------------------V 145
           H H++K G   D+++  SL+  Y+ NG                                +
Sbjct: 157 HGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYI 216

Query: 146 PSASLIFDSIPDPDVVSWTSIISGLSKLGFEREALSKFLSM---NVKPNSTTLVTALSAC 205
            +A  +FD IP  DVVSW ++ISG ++ G  +EAL  F  M   NV+P+ +T+VT +SAC
Sbjct: 217 ENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSAC 276

Query: 206 SSLRCLKIGKAIHGLRLRTLNEENVSLDNALLDFYVRCAYLRSAEKLFEKMPKRDV---- 265
           +    +++G+ +H          N+ + NAL+D Y +C  L +A  LFE++P +DV    
Sbjct: 277 AQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWN 336

Query: 266 ---------GLCEEAVRVFQNMIHGGEAIPNEATLVNVLSACSSMSALHLGEWVHSYINS 325
                     L +EA+ +FQ M+  GE  PN+ T++++L AC+ + A+ +G W+H YI+ 
Sbjct: 337 TLIGGYTHMNLYKEALLLFQEMLRSGET-PNDVTMLSILPACAHLGAIDIGRWIHVYIDK 396

Query: 326 R-QDVTIDGNVGNALINMYVKCGNMEIAILIFKAIKHKDIITWSTITSGLAMNGLGKQAF 385
           R + VT   ++  +LI+MY KCG++E A  +F +I HK + +W+ +  G AM+G    +F
Sbjct: 397 RLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASF 456

Query: 386 VLFSLMLVHGISPDDITFLGLLSACSHGGLINQGTMVFEAMKDVYNISPQMRHYACMVDM 445
            LFS M   GI PDDITF+GLLSACSH G+++ G  +F  M   Y ++P++ HY CM+D+
Sbjct: 457 DLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDL 516

Query: 446 YGKAGLLDEAEAFIKEMPMEAEGPVWGALLHACQIHGNEKKYEKVREWLLGSKGVTVGTF 497
            G +GL  EAE  I  M ME +G +W +LL AC++HGN +  E   E L+  +    G++
Sbjct: 517 LGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPENPGSY 576

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BLAST of PI0014277 vs. ExPASy Swiss-Prot
Match: Q9SZK1 (Pentatricopeptide repeat-containing protein At4g38010 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E45 PE=3 SV=1)

HSP 1 Score: 321.2 bits (822), Expect = 2.0e-86
Identity = 179/480 (37.29%), Postives = 272/480 (56.67%), Query Frame = 0


Query: 31  FNPLLGSLVNSISPENGLFLYNQMLCYPSSHNHFTFTYALKACCLLHQTQKGLEIHAHLI 90
           +N LL S      P   +F Y   +    S + FTF    KAC      ++G +IH  + 
Sbjct: 74  YNTLLSSYAVCDKPRVTIFAYKTFVSNGFSPDMFTFPPVFKACGKFSGIREGKQIHGIVT 133

Query: 91  KSGHLSDIFIQNSLLHFYILNGNVPSASLIFDSIPDPDVVSWTSIISGLSKLGFEREALS 150
           K G   DI++QNSL+HFY + G   +A  +F  +P  DVVSWT II+G ++ G  +EAL 
Sbjct: 134 KMGFYDDIYVQNSLVHFYGVCGESRNACKVFGEMPVRDVVSWTGIITGFTRTGLYKEALD 193

Query: 151 KFLSMNVKPNSTTLVTALSACSSLRCLKIGKAIHGLRLRTLNEENVSLDNALLDFYVRCA 210
            F  M+V+PN  T V  L +   + CL +GK IHGL L+  +  ++   NAL+D YV+C 
Sbjct: 194 TFSKMDVEPNLATYVCVLVSSGRVGCLSLGKGIHGLILKRASLISLETGNALIDMYVKCE 253

Query: 211 YLRSAEKLFEKMPKRD--------VGL--CE---EAVRVFQNMIHGGEAIPNEATLVNVL 270
            L  A ++F ++ K+D         GL  CE   EA+ +F  M       P+   L +VL
Sbjct: 254 QLSDAMRVFGELEKKDKVSWNSMISGLVHCERSKEAIDLFSLMQTSSGIKPDGHILTSVL 313

Query: 271 SACSSMSALHLGEWVHSYINSRQDVTIDGNVGNALINMYVKCGNMEIAILIFKAIKHKDI 330
           SAC+S+ A+  G WVH YI +   +  D ++G A+++MY KCG +E A+ IF  I+ K++
Sbjct: 314 SACASLGAVDHGRWVHEYILT-AGIKWDTHIGTAIVDMYAKCGYIETALEIFNGIRSKNV 373

Query: 331 ITWSTITSGLAMNGLGKQAFVLFSLMLVHGISPDDITFLGLLSACSHGGLINQGTMVFEA 390
            TW+ +  GLA++G G ++   F  M+  G  P+ +TFL  L+AC H GL+++G   F  
Sbjct: 374 FTWNALLGGLAIHGHGLESLRYFEEMVKLGFKPNLVTFLAALNACCHTGLVDEGRRYFHK 433

Query: 391 MKD-VYNISPQMRHYACMVDMYGKAGLLDEAEAFIKEMPMEAEGPVWGALLHACQIHGNE 450
           MK   YN+ P++ HY CM+D+  +AGLLDEA   +K MP++ +  + GA+L AC+  G  
Sbjct: 434 MKSREYNLFPKLEHYGCMIDLLCRAGLLDEALELVKAMPVKPDVRICGAILSACKNRGTL 493

Query: 451 KKYEK-VREWLLGSKGVTVGTFALLSNTYASCDRWDDANDVRDAMRNRGLKKMAGRSWIE 496
            +  K + +  L  +    G + LLSN +A+  RWDD   +R  M+ +G+ K+ G S+IE
Sbjct: 494 MELPKEILDSFLDIEFEDSGVYVLLSNIFAANRRWDDVARIRRLMKVKGISKVPGSSYIE 552

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BLAST of PI0014277 vs. ExPASy Swiss-Prot
Match: Q9SX45 (Pentatricopeptide repeat-containing protein At1g50270 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E42 PE=2 SV=1)

HSP 1 Score: 310.8 bits (795), Expect = 2.7e-83
Identity = 170/456 (37.28%), Postives = 269/456 (58.99%), Query Frame = 0


Query: 58  PSSHNHFTFTYALKACCLLHQTQKGLEIHAHLIKSGHLSDIFIQNSLLHFYILNGNVPSA 117
           PS H   TF   LKA   L  +    + HAH++K G  SD F++NSL+  Y  +G    A
Sbjct: 102 PSRH---TFPPLLKAVFKLRDSNP-FQFHAHIVKFGLDSDPFVRNSLISGYSSSGLFDFA 161

Query: 118 SLIFDSIPDPDVVSWTSIISGLSKLGFEREALSKFLSM---NVKPNSTTLVTALSACSSL 177
           S +FD   D DVV+WT++I G  + G   EA+  F+ M    V  N  T+V+ L A   +
Sbjct: 162 SRLFDGAEDKDVVTWTAMIDGFVRNGSASEAMVYFVEMKKTGVAANEMTVVSVLKAAGKV 221

Query: 178 RCLKIGKAIHGLRLRTLNEE-NVSLDNALLDFYVRCAYLRSAEKLFEKMPKRDV------ 237
             ++ G+++HGL L T   + +V + ++L+D Y +C+    A+K+F++MP R+V      
Sbjct: 222 EDVRFGRSVHGLYLETGRVKCDVFIGSSLVDMYGKCSCYDDAQKVFDEMPSRNVVTWTAL 281

Query: 238 ------GLC-EEAVRVFQNMIHGGEAIPNEATLVNVLSACSSMSALHLGEWVHSYINSRQ 297
                   C ++ + VF+ M+   +  PNE TL +VLSAC+ + ALH G  VH Y+  + 
Sbjct: 282 IAGYVQSRCFDKGMLVFEEMLK-SDVAPNEKTLSSVLSACAHVGALHRGRRVHCYM-IKN 341

Query: 298 DVTIDGNVGNALINMYVKCGNMEIAILIFKAIKHKDIITWSTITSGLAMNGLGKQAFVLF 357
            + I+   G  LI++YVKCG +E AIL+F+ +  K++ TW+ + +G A +G  + AF LF
Sbjct: 342 SIEINTTAGTTLIDLYVKCGCLEEAILVFERLHEKNVYTWTAMINGFAAHGYARDAFDLF 401

Query: 358 SLMLVHGISPDDITFLGLLSACSHGGLINQGTMVFEAMKDVYNISPQMRHYACMVDMYGK 417
             ML   +SP+++TF+ +LSAC+HGGL+ +G  +F +MK  +N+ P+  HYACMVD++G+
Sbjct: 402 YTMLSSHVSPNEVTFMAVLSACAHGGLVEEGRRLFLSMKGRFNMEPKADHYACMVDLFGR 461

Query: 418 AGLLDEAEAFIKEMPMEAEGPVWGALLHACQIHGNEKKYEKVREWLLGSKGVTVGTFALL 477
            GLL+EA+A I+ MPME    VWGAL  +C +H + +  +     ++  +    G + LL
Sbjct: 462 KGLLEEAKALIERMPMEPTNVVWGALFGSCLLHKDYELGKYAASRVIKLQPSHSGRYTLL 521

Query: 478 SNTYASCDRWDDANDVRDAMRNRGLKKMAGRSWIEL 497
           +N Y+    WD+   VR  M+++ + K  G SWIE+
Sbjct: 522 ANLYSESQNWDEVARVRKQMKDQQVVKSPGFSWIEV 551

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BLAST of PI0014277 vs. ExPASy Swiss-Prot
Match: Q9SIT7 (Pentatricopeptide repeat-containing protein At2g13600 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E76 PE=3 SV=1)

HSP 1 Score: 305.8 bits (782), Expect = 8.8e-82
Identity = 168/488 (34.43%), Postives = 261/488 (53.48%), Query Frame = 0


Query: 62  NHFTFTYALKACCLLHQTQKGLEIHAHLIKSGHLSDIFIQNSLLHFYILNGNVPSASLIF 121
           N ++F   L AC  L+   KG+++H+ + KS  LSD++I ++L+  Y   GNV  A  +F
Sbjct: 151 NEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVF 210

Query: 122 DSIPDPDVVSWTSIISGLSKLGFEREALSKF---LSMNVKPNSTTLVTALSACSSLRCLK 181
           D + D +VVSW S+I+   + G   EAL  F   L   V+P+  TL + +SAC+SL  +K
Sbjct: 211 DEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIK 270

Query: 182 IGKAIHGLRLRTLNEEN-VSLDNALLDFYVRCAYLRSAEKLFEKMPKRDV---------- 241
           +G+ +HG  ++     N + L NA +D Y +C+ ++ A  +F+ MP R+V          
Sbjct: 271 VGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGY 330

Query: 242 ----------------------------------GLCEEAVRVFQNMIHGGEAIPNEATL 301
                                             G  EEA+ +F  ++      P   + 
Sbjct: 331 AMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLF-CLLKRESVCPTHYSF 390

Query: 302 VNVLSACSSMSALHLGEWVHSYI-----NSRQDVTIDGNVGNALINMYVKCGNMEIAILI 361
            N+L AC+ ++ LHLG   H ++       +     D  VGN+LI+MYVKCG +E   L+
Sbjct: 391 ANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLV 450

Query: 362 FKAIKHKDIITWSTITSGLAMNGLGKQAFVLFSLMLVHGISPDDITFLGLLSACSHGGLI 421
           F+ +  +D ++W+ +  G A NG G +A  LF  ML  G  PD IT +G+LSAC H G +
Sbjct: 451 FRKMMERDCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIGVLSACGHAGFV 510

Query: 422 NQGTMVFEAMKDVYNISPQMRHYACMVDMYGKAGLLDEAEAFIKEMPMEAEGPVWGALLH 481
            +G   F +M   + ++P   HY CMVD+ G+AG L+EA++ I+EMPM+ +  +WG+LL 
Sbjct: 511 EEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGSLLA 570

Query: 482 ACQIHGNEKKYEKVREWLLGSKGVTVGTFALLSNTYASCDRWDDANDVRDAMRNRGLKKM 497
           AC++H N    + V E LL  +    G + LLSN YA   +W+D  +VR +MR  G+ K 
Sbjct: 571 ACKVHRNITLGKYVAEKLLEVEPSNSGPYVLLSNMYAELGKWEDVMNVRKSMRKEGVTKQ 630

[Close]

BLAST of PI0014277 vs. ExPASy Swiss-Prot
Match: Q9SJZ3 (Pentatricopeptide repeat-containing protein At2g22410, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-E28 PE=2 SV=1)

HSP 1 Score: 302.8 bits (774), Expect = 7.5e-81
Identity = 177/522 (33.91%), Postives = 277/522 (53.07%), Query Frame = 0


Query: 25  NPKPHIFNPLLGSLVNSISPENGLFLYNQML---CYPSSHNHFTFTYALKACCLLHQTQK 84
           NP    +N  +     S +P+    LY QML   C  S  +HFT+    K C  L  +  
Sbjct: 115 NPNIFSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVCADLRLSSL 174

Query: 85  GLEIHAHLIKSGHLSDIFIQNSLLHFYILNGNVPSASLIFDSIPDPDVVSWTSIISGLSK 144
           G  I  H++K        + N+ +H +   G++ +A  +FD  P  D+VSW  +I+G  K
Sbjct: 175 GHMILGHVLKLRLELVSHVHNASIHMFASCGDMENARKVFDESPVRDLVSWNCLINGYKK 234

Query: 145 LGFEREALSKFLSM---NVKPNSTTLVTALSACSSLRCLKIGKAIH------GLRLR--- 204
           +G   +A+  +  M    VKP+  T++  +S+CS L  L  GK  +      GLR+    
Sbjct: 235 IGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIPL 294

Query: 205 ------------TLNEENVSLDN----------ALLDFYVRCAYLRSAEKLFEKMPKRDV 264
                        ++E     DN           ++  Y RC  L  + KLF+ M ++DV
Sbjct: 295 VNALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEEKDV 354

Query: 265 GLC-------------EEAVRVFQNMIHGGEAIPNEATLVNVLSACSSMSALHLGEWVHS 324
            L              ++A+ +FQ M       P+E T+++ LSACS + AL +G W+H 
Sbjct: 355 VLWNAMIGGSVQAKRGQDALALFQEM-QTSNTKPDEITMIHCLSACSQLGALDVGIWIHR 414

Query: 325 YINSRQDVTIDGNVGNALINMYVKCGNMEIAILIFKAIKHKDIITWSTITSGLAMNGLGK 384
           YI  +  ++++  +G +L++MY KCGN+  A+ +F  I+ ++ +T++ I  GLA++G   
Sbjct: 415 YI-EKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQTRNSLTYTAIIGGLALHGDAS 474

Query: 385 QAFVLFSLMLVHGISPDDITFLGLLSACSHGGLINQGTMVFEAMKDVYNISPQMRHYACM 444
            A   F+ M+  GI+PD+ITF+GLLSAC HGG+I  G   F  MK  +N++PQ++HY+ M
Sbjct: 475 TAISYFNEMIDAGIAPDEITFIGLLSACCHGGMIQTGRDYFSQMKSRFNLNPQLKHYSIM 534

Query: 445 VDMYGKAGLLDEAEAFIKEMPMEAEGPVWGALLHACQIHGNEKKYEKVREWLLGSKGVTV 497
           VD+ G+AGLL+EA+  ++ MPMEA+  VWGALL  C++HGN +  EK  + LL       
Sbjct: 535 VDLLGRAGLLEEADRLMESMPMEADAAVWGALLFGCRMHGNVELGEKAAKKLLELDPSDS 594

[Close]

BLAST of PI0014277 vs. ExPASy TrEMBL
Match: A0A0A0LXJ1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G613550 PE=4 SV=1)

HSP 1 Score: 944.5 bits (2440), Expect = 1.8e-271
Identity = 467/516 (90.50%), Postives = 486/516 (94.19%), Query Frame = 0


Query: 1   MPLKPLKPSISIAQFTQIHAKLRTNPKPHIFNPLLGSLVNSISPENGLFLYNQMLCYPSS 60
           MPLKPLKPSISIAQFTQIHAKL TNPKPHIFNPLLGSLVNSI PENGLFLYNQML YPSS
Sbjct: 1   MPLKPLKPSISIAQFTQIHAKLLTNPKPHIFNPLLGSLVNSIFPENGLFLYNQMLRYPSS 60

Query: 61  HNHFTFTYALKACCLLHQTQKGLEIHAHLIKSGHLSDIFIQNSLLHFYILNGNVPSASLI 120
           HNHFTFTYALKACC LHQTQKGLEIHAHLIKSGHLSDIFIQNSLLHFYIL+G+V SASLI
Sbjct: 61  HNHFTFTYALKACCFLHQTQKGLEIHAHLIKSGHLSDIFIQNSLLHFYILDGDVSSASLI 120

Query: 121 FDSIPDPDVVSWTSIISGLSKLGFEREALSKFLSMNVKPNSTTLVTALSACSSLRCLKIG 180
           FDSIPDPDVVSWTSIISGLSKLGFE+EALSKFLSMNV+PNSTTLVTALSACSSLRCLK+G
Sbjct: 121 FDSIPDPDVVSWTSIISGLSKLGFEKEALSKFLSMNVRPNSTTLVTALSACSSLRCLKLG 180

Query: 181 KAIHGLRLRTLNEENVSLDNALLDFYVRCAYLRSAEKLFEKMPKRDV------------- 240
           KAIHGLR+RTLNEENV L+NALLDFYVRCAYLRSAE LFEKMPKRDV             
Sbjct: 181 KAIHGLRMRTLNEENVILENALLDFYVRCAYLRSAENLFEKMPKRDVVSWTTMIGGYAQS 240

Query: 241 GLCEEAVRVFQNMIHGGEAIPNEATLVNVLSACSSMSALHLGEWVHSYINSRQDVTIDGN 300
           GLCEEAVRVFQNM+H GEAIPNEATLVNVLSACSS+SALHLG+WVHSYINSR DV IDGN
Sbjct: 241 GLCEEAVRVFQNMVHVGEAIPNEATLVNVLSACSSISALHLGQWVHSYINSRHDVIIDGN 300

Query: 301 VGNALINMYVKCGNMEIAILIFKAIKHKDIITWSTITSGLAMNGLGKQAFVLFSLMLVHG 360
           VGNALINMYVKCGNME+AILIFKAI+HKDI++WSTI SGLAMNGLGKQAFVLFSLMLVHG
Sbjct: 301 VGNALINMYVKCGNMEMAILIFKAIEHKDIVSWSTIISGLAMNGLGKQAFVLFSLMLVHG 360

Query: 361 ISPDDITFLGLLSACSHGGLINQGTMVFEAMKDVYNISPQMRHYACMVDMYGKAGLLDEA 420
           +SPDDITFLGLLSACSHGGLINQG MVFEAMKDVYNISPQMRHYACMVDMYGKAGLLDEA
Sbjct: 361 VSPDDITFLGLLSACSHGGLINQGMMVFEAMKDVYNISPQMRHYACMVDMYGKAGLLDEA 420

Query: 421 EAFIKEMPMEAEGPVWGALLHACQIHGNEKKYEKVREWLLGSKGVTVGTFALLSNTYASC 480
           EAFIKEMPMEAEGPVWGALLHACQ+HGNEKKYEKVREWLLGSKGVTVGTFALLSNTYA C
Sbjct: 421 EAFIKEMPMEAEGPVWGALLHACQLHGNEKKYEKVREWLLGSKGVTVGTFALLSNTYACC 480

Query: 481 DRWDDANDVRDAMRNRGLKKMAGRSWIELVDPLNPL 504
           DRW+DANDVR AMR+RGLKKMAGRSWIE+VD   PL
Sbjct: 481 DRWNDANDVRVAMRSRGLKKMAGRSWIEMVDSTYPL 516

[Close]

BLAST of PI0014277 vs. ExPASy TrEMBL
Match: A0A5D3D5L6 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold204G00410 PE=4 SV=1)

HSP 1 Score: 937.9 bits (2423), Expect = 1.7e-269
Identity = 467/516 (90.50%), Postives = 485/516 (93.99%), Query Frame = 0


Query: 1   MPLKPLKPSISIAQFTQIHAKLRTNPKPHIFNPLLGSLVNSISPENGLFLYNQMLCYPSS 60
           MPLKPLKPSISIAQFTQIHAKL TNPKPHIFNPLLGSLVNSISPENGLFLYNQML YPSS
Sbjct: 106 MPLKPLKPSISIAQFTQIHAKLLTNPKPHIFNPLLGSLVNSISPENGLFLYNQMLHYPSS 165

Query: 61  HNHFTFTYALKACCLLHQTQKGLEIHAHLIKSGHLSDIFIQNSLLHFYILNGNVPSASLI 120
           HNHFTFTYALKACC LHQTQKGLEIHAHLIKSGHLSDIFIQNSLLHFYILNG+V SASLI
Sbjct: 166 HNHFTFTYALKACCFLHQTQKGLEIHAHLIKSGHLSDIFIQNSLLHFYILNGDVSSASLI 225

Query: 121 FDSIPDPDVVSWTSIISGLSKLGFEREALSKFLSMNVKPNSTTLVTALSACSSLRCLKIG 180
           FDSIP+PDVVSWTSIISGLSKLGFE+EAL KFLSMNV+PNSTTLVTALSACSSLRCLK+G
Sbjct: 226 FDSIPNPDVVSWTSIISGLSKLGFEKEALGKFLSMNVRPNSTTLVTALSACSSLRCLKLG 285

Query: 181 KAIHGLRLRTLNEENVSLDNALLDFYVRCAYLRSAEKLFEKMPKRDV------------- 240
           KAIHGLRLRTLNEENVSL+NALLDFYVRCAYLRSAE LFEKM KRDV             
Sbjct: 286 KAIHGLRLRTLNEENVSLENALLDFYVRCAYLRSAENLFEKMHKRDVVSWTTMIGGYAQS 345

Query: 241 GLCEEAVRVFQNMIHGGEAIPNEATLVNVLSACSSMSALHLGEWVHSYINSRQDVTIDGN 300
           GLCEEAVRVFQNM+H GEAIPNEATLVNVLSACSS+SALHLG+WVHSYINSR DV IDGN
Sbjct: 346 GLCEEAVRVFQNMVHVGEAIPNEATLVNVLSACSSISALHLGQWVHSYINSRHDVIIDGN 405

Query: 301 VGNALINMYVKCGNMEIAILIFKAIKHKDIITWSTITSGLAMNGLGKQAFVLFSLMLVHG 360
           VGNALINMYVKCGNME+AILIF AI+HKDII+WST+ SGLAMNGLGKQAFVLFSLMLVHG
Sbjct: 406 VGNALINMYVKCGNMEMAILIFNAIEHKDIISWSTVISGLAMNGLGKQAFVLFSLMLVHG 465

Query: 361 ISPDDITFLGLLSACSHGGLINQGTMVFEAMKDVYNISPQMRHYACMVDMYGKAGLLDEA 420
           ISPDDITFLGLLSACSHGGLINQG MVFEAMKDVYNISPQ+RHYACMVDMYGKAGLLDEA
Sbjct: 466 ISPDDITFLGLLSACSHGGLINQGMMVFEAMKDVYNISPQIRHYACMVDMYGKAGLLDEA 525

Query: 421 EAFIKEMPMEAEGPVWGALLHACQIHGNEKKYEKVREWLLGSKGVTVGTFALLSNTYASC 480
           EAFIKEMPMEAEGPVWGALLHACQIHGNEKKYEKVRE LLGSKGVTVG FALLSNTYASC
Sbjct: 526 EAFIKEMPMEAEGPVWGALLHACQIHGNEKKYEKVRECLLGSKGVTVGAFALLSNTYASC 585

Query: 481 DRWDDANDVRDAMRNRGLKKMAGRSWIELVDPLNPL 504
           DRW+DANDVR AMR+RGLKKMAG SWIELV+P NP+
Sbjct: 586 DRWNDANDVRVAMRSRGLKKMAGCSWIELVNPSNPV 621

[Close]

BLAST of PI0014277 vs. ExPASy TrEMBL
Match: A0A1S4DY27 (pentatricopeptide repeat-containing protein At1g08070, chloroplastic-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103492035 PE=4 SV=1)

HSP 1 Score: 933.7 bits (2412), Expect = 3.2e-268
Identity = 465/517 (89.94%), Postives = 484/517 (93.62%), Query Frame = 0


Query: 1   MPLKPLKPSISIAQFTQIHAKLRTNPKPHIFNPLLGSLVNSISPENGLFLYNQMLCYPSS 60
           MPLKPLKPSIS AQFTQIHAKL TNPKPHIFNPLLGSLVNSISPENGLFLYNQML YPSS
Sbjct: 1   MPLKPLKPSISFAQFTQIHAKLLTNPKPHIFNPLLGSLVNSISPENGLFLYNQMLHYPSS 60

Query: 61  HNHFTFTYALKACCLLHQTQKGLEIHAHLIKSGHLSDIFIQNSLLHFYILNGNVPSASLI 120
           HNHFTFTYALKACC LHQTQKGLEIHAHLIKSGHLSDIFIQNSLLHFYIL+G+V SASLI
Sbjct: 61  HNHFTFTYALKACCFLHQTQKGLEIHAHLIKSGHLSDIFIQNSLLHFYILHGDVSSASLI 120

Query: 121 FDSIPDPDVVSWTSIISGLSKLGFEREALSKFLSMNVKPNSTTLVTALSACSSLRCLKIG 180
           FDSIP+PDVVSWTSIISG SKLGFE+EAL KFLSMNV+PNSTTLVTALSACSSLR LK+G
Sbjct: 121 FDSIPNPDVVSWTSIISGFSKLGFEKEALGKFLSMNVRPNSTTLVTALSACSSLRRLKLG 180

Query: 181 KAIHGLRLRTLNEENVSLDNALLDFYVRCAYLRSAEKLFEKMPKRDV------------- 240
           KAIHGLRLRTLNEENVSL+NALLDFYVRCAYLRSAE LFEKM KRDV             
Sbjct: 181 KAIHGLRLRTLNEENVSLENALLDFYVRCAYLRSAENLFEKMHKRDVVSWTTMIGGYAQS 240

Query: 241 GLCEEAVRVFQNMIHGGEAIPNEATLVNVLSACSSMSALHLGEWVHSYINSRQDVTIDGN 300
           GLCEEAVRVFQNM+H GEAIPNEATLVNVLSACSS+SALHLG+WVHSYINSR DV IDGN
Sbjct: 241 GLCEEAVRVFQNMVHAGEAIPNEATLVNVLSACSSISALHLGQWVHSYINSRHDVIIDGN 300

Query: 301 VGNALINMYVKCGNMEIAILIFKAIKHKDIITWSTITSGLAMNGLGKQAFVLFSLMLVHG 360
           VGNALINMYVKCGNME+AILIFKAI+HKDII+WST+ SGLAMNGLGKQAFVLFSLMLVHG
Sbjct: 301 VGNALINMYVKCGNMEMAILIFKAIEHKDIISWSTVISGLAMNGLGKQAFVLFSLMLVHG 360

Query: 361 ISPDDITFLGLLSACSHGGLINQGTMVFEAMKDVYNISPQMRHYACMVDMYGKAGLLDEA 420
           ISPDDITFLGLLSACSHGGLINQG MVFEAMKDVYNISPQ+RHYACMVDMYGKAGLLDEA
Sbjct: 361 ISPDDITFLGLLSACSHGGLINQGMMVFEAMKDVYNISPQIRHYACMVDMYGKAGLLDEA 420

Query: 421 EAFIKEMPMEAEGPVWGALLHACQIHGNEKKYEKVREWLLGSKGVTVGTFALLSNTYASC 480
           EAFIKEMPMEAEGPVWGALLHACQIHGNEKKYEKVRE LLGSKGVTVG FALLSNTYASC
Sbjct: 421 EAFIKEMPMEAEGPVWGALLHACQIHGNEKKYEKVRECLLGSKGVTVGAFALLSNTYASC 480

Query: 481 DRWDDANDVRDAMRNRGLKKMAGRSWIELVDPLNPLG 505
           DRW+DANDVR AMR+RGLKKMAG SWIELV+P NP+G
Sbjct: 481 DRWNDANDVRVAMRSRGLKKMAGCSWIELVNPSNPVG 517

[Close]

BLAST of PI0014277 vs. ExPASy TrEMBL
Match: A0A6J1H7Z9 (pentatricopeptide repeat-containing protein At1g08070, chloroplastic-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111461372 PE=4 SV=1)

HSP 1 Score: 855.1 bits (2208), Expect = 1.4e-244
Identity = 417/517 (80.66%), Postives = 465/517 (89.94%), Query Frame = 0


Query: 1   MPLKPLKPSISIAQFTQIHAKLRTNPKPHIFNPLLGSLVNSISPENGLFLYNQMLCYPSS 60
           MP +P K  IS AQ +QIHA+L TNPKP +FNPLLG+LV+S++PENGLFLYNQML +PSS
Sbjct: 1   MPFRPPKLWISSAQLSQIHAQLLTNPKPRVFNPLLGALVDSVAPENGLFLYNQMLRHPSS 60

Query: 61  HNHFTFTYALKACCLLHQTQKGLEIHAHLIKSGHLSDIFIQNSLLHFYILNGNVPSASLI 120
           HNH+TFTYALKAC LLH+T KGLEIHA LIKSGHLSDIFIQNSLLHFYI++G+VPSAS +
Sbjct: 61  HNHYTFTYALKACFLLHETHKGLEIHARLIKSGHLSDIFIQNSLLHFYIVDGDVPSASRV 120

Query: 121 FDSIPDPDVVSWTSIISGLSKLGFEREALSKFLSMNVKPNSTTLVTALSACSSLRCLKIG 180
           FDSIPDPDVVSWTSIISGLSKLGF+ EAL KFLSMNV PNS TLV+ALSACSSLRC+KIG
Sbjct: 121 FDSIPDPDVVSWTSIISGLSKLGFKEEALGKFLSMNVSPNSATLVSALSACSSLRCVKIG 180

Query: 181 KAIHGLRLRTLNEENVSLDNALLDFYVRCAYLRSAEKLFEKMPKRDV------------- 240
           KAIHGL+LR+LNEE+V+LDNALLDFYVRC  LR A+ LF++MP+RDV             
Sbjct: 181 KAIHGLKLRSLNEESVNLDNALLDFYVRCGSLRGAQNLFDEMPQRDVVSWTTLIGGYALT 240

Query: 241 GLCEEAVRVFQNMIHGGEAIPNEATLVNVLSACSSMSALHLGEWVHSYINSRQDVTIDGN 300
           GLCEEAVRVFQNM+H  EAIPNEATL+NVLSACSSMSALHLG+WVHSYINSR DV IDGN
Sbjct: 241 GLCEEAVRVFQNMVHAREAIPNEATLINVLSACSSMSALHLGQWVHSYINSRHDVIIDGN 300

Query: 301 VGNALINMYVKCGNMEIAILIFKAIKHKDIITWSTITSGLAMNGLGKQAFVLFSLMLVHG 360
           +GNALINMYVKCG+M+ AI IFK ++HKDII+WSTI SGLAMNG GKQAF LFSLMLVHG
Sbjct: 301 IGNALINMYVKCGSMDKAISIFKTVEHKDIISWSTIISGLAMNGQGKQAFGLFSLMLVHG 360

Query: 361 ISPDDITFLGLLSACSHGGLINQGTMVFEAMKDVYNISPQMRHYACMVDMYGKAGLLDEA 420
           I+PD ITFL LLSACSHGGLINQG MVFEAMKDVYN++P+MRHYACMVDMYGKAGLLDEA
Sbjct: 361 ITPDAITFLSLLSACSHGGLINQGLMVFEAMKDVYNVAPEMRHYACMVDMYGKAGLLDEA 420

Query: 421 EAFIKEMPMEAEGPVWGALLHACQIHGNEKKYEKVREWLLGSKGVTVGTFALLSNTYASC 480
           EAFIKEMP+EAEGPVWGALLHACQ+HGNE +YEKVR+WLL SK +TVGT+ALLSNTYASC
Sbjct: 421 EAFIKEMPVEAEGPVWGALLHACQLHGNE-RYEKVRQWLLSSKSITVGTYALLSNTYASC 480

Query: 481 DRWDDANDVRDAMRNRGLKKMAGRSWIELVDPLNPLG 505
           DRW+DAN+VRDAMR+RGLKKMAG SWIEL DPLNPLG
Sbjct: 481 DRWNDANEVRDAMRSRGLKKMAGCSWIELADPLNPLG 516

[Close]

BLAST of PI0014277 vs. ExPASy TrEMBL
Match: A0A1S4DY30 (pentatricopeptide repeat-containing protein At1g08070, chloroplastic-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103492035 PE=4 SV=1)

HSP 1 Score: 855.1 bits (2208), Expect = 1.4e-244
Identity = 434/517 (83.95%), Postives = 450/517 (87.04%), Query Frame = 0


Query: 1   MPLKPLKPSISIAQFTQIHAKLRTNPKPHIFNPLLGSLVNSISPENGLFLYNQMLCYPSS 60
           MPLKPLKPSIS AQFTQIHAKL TNPKPHIFNPLLGSLVNSISPENGLFLYNQML YPSS
Sbjct: 1   MPLKPLKPSISFAQFTQIHAKLLTNPKPHIFNPLLGSLVNSISPENGLFLYNQMLHYPSS 60

Query: 61  HNHFTFTYALKACCLLHQTQKGLEIHAHLIKSGHLSDIFIQNSLLHFYILNGNVPSASLI 120
           HNHFTFTYALKACC LHQTQKGLEIHAHLIKS                            
Sbjct: 61  HNHFTFTYALKACCFLHQTQKGLEIHAHLIKS---------------------------- 120

Query: 121 FDSIPDPDVVSWTSIISGLSKLGFEREALSKFLSMNVKPNSTTLVTALSACSSLRCLKIG 180
                  DVVSWTSIISG SKLGFE+EAL KFLSMNV+PNSTTLVTALSACSSLR LK+G
Sbjct: 121 -------DVVSWTSIISGFSKLGFEKEALGKFLSMNVRPNSTTLVTALSACSSLRRLKLG 180

Query: 181 KAIHGLRLRTLNEENVSLDNALLDFYVRCAYLRSAEKLFEKMPKRDV------------- 240
           KAIHGLRLRTLNEENVSL+NALLDFYVRCAYLRSAE LFEKM KRDV             
Sbjct: 181 KAIHGLRLRTLNEENVSLENALLDFYVRCAYLRSAENLFEKMHKRDVVSWTTMIGGYAQS 240

Query: 241 GLCEEAVRVFQNMIHGGEAIPNEATLVNVLSACSSMSALHLGEWVHSYINSRQDVTIDGN 300
           GLCEEAVRVFQNM+H GEAIPNEATLVNVLSACSS+SALHLG+WVHSYINSR DV IDGN
Sbjct: 241 GLCEEAVRVFQNMVHAGEAIPNEATLVNVLSACSSISALHLGQWVHSYINSRHDVIIDGN 300

Query: 301 VGNALINMYVKCGNMEIAILIFKAIKHKDIITWSTITSGLAMNGLGKQAFVLFSLMLVHG 360
           VGNALINMYVKCGNME+AILIFKAI+HKDII+WST+ SGLAMNGLGKQAFVLFSLMLVHG
Sbjct: 301 VGNALINMYVKCGNMEMAILIFKAIEHKDIISWSTVISGLAMNGLGKQAFVLFSLMLVHG 360

Query: 361 ISPDDITFLGLLSACSHGGLINQGTMVFEAMKDVYNISPQMRHYACMVDMYGKAGLLDEA 420
           ISPDDITFLGLLSACSHGGLINQG MVFEAMKDVYNISPQ+RHYACMVDMYGKAGLLDEA
Sbjct: 361 ISPDDITFLGLLSACSHGGLINQGMMVFEAMKDVYNISPQIRHYACMVDMYGKAGLLDEA 420

Query: 421 EAFIKEMPMEAEGPVWGALLHACQIHGNEKKYEKVREWLLGSKGVTVGTFALLSNTYASC 480
           EAFIKEMPMEAEGPVWGALLHACQIHGNEKKYEKVRE LLGSKGVTVG FALLSNTYASC
Sbjct: 421 EAFIKEMPMEAEGPVWGALLHACQIHGNEKKYEKVRECLLGSKGVTVGAFALLSNTYASC 480

Query: 481 DRWDDANDVRDAMRNRGLKKMAGRSWIELVDPLNPLG 505
           DRW+DANDVR AMR+RGLKKMAG SWIELV+P NP+G
Sbjct: 481 DRWNDANDVRVAMRSRGLKKMAGCSWIELVNPSNPVG 482

[Close]

BLAST of PI0014277 vs. NCBI nr
Match: XP_011660133.1 (pentatricopeptide repeat-containing protein At1g08070, chloroplastic isoform X1 [Cucumis sativus] >XP_031745752.1 pentatricopeptide repeat-containing protein At1g08070, chloroplastic isoform X1 [Cucumis sativus] >XP_031745757.1 pentatricopeptide repeat-containing protein At1g08070, chloroplastic isoform X1 [Cucumis sativus] >XP_031745768.1 pentatricopeptide repeat-containing protein At1g08070, chloroplastic isoform X1 [Cucumis sativus] >KGN66483.1 hypothetical protein Csa_006958 [Cucumis sativus])

HSP 1 Score: 944.5 bits (2440), Expect = 3.7e-271
Identity = 467/516 (90.50%), Postives = 486/516 (94.19%), Query Frame = 0


Query: 1   MPLKPLKPSISIAQFTQIHAKLRTNPKPHIFNPLLGSLVNSISPENGLFLYNQMLCYPSS 60
           MPLKPLKPSISIAQFTQIHAKL TNPKPHIFNPLLGSLVNSI PENGLFLYNQML YPSS
Sbjct: 1   MPLKPLKPSISIAQFTQIHAKLLTNPKPHIFNPLLGSLVNSIFPENGLFLYNQMLRYPSS 60

Query: 61  HNHFTFTYALKACCLLHQTQKGLEIHAHLIKSGHLSDIFIQNSLLHFYILNGNVPSASLI 120
           HNHFTFTYALKACC LHQTQKGLEIHAHLIKSGHLSDIFIQNSLLHFYIL+G+V SASLI
Sbjct: 61  HNHFTFTYALKACCFLHQTQKGLEIHAHLIKSGHLSDIFIQNSLLHFYILDGDVSSASLI 120

Query: 121 FDSIPDPDVVSWTSIISGLSKLGFEREALSKFLSMNVKPNSTTLVTALSACSSLRCLKIG 180
           FDSIPDPDVVSWTSIISGLSKLGFE+EALSKFLSMNV+PNSTTLVTALSACSSLRCLK+G
Sbjct: 121 FDSIPDPDVVSWTSIISGLSKLGFEKEALSKFLSMNVRPNSTTLVTALSACSSLRCLKLG 180

Query: 181 KAIHGLRLRTLNEENVSLDNALLDFYVRCAYLRSAEKLFEKMPKRDV------------- 240
           KAIHGLR+RTLNEENV L+NALLDFYVRCAYLRSAE LFEKMPKRDV             
Sbjct: 181 KAIHGLRMRTLNEENVILENALLDFYVRCAYLRSAENLFEKMPKRDVVSWTTMIGGYAQS 240

Query: 241 GLCEEAVRVFQNMIHGGEAIPNEATLVNVLSACSSMSALHLGEWVHSYINSRQDVTIDGN 300
           GLCEEAVRVFQNM+H GEAIPNEATLVNVLSACSS+SALHLG+WVHSYINSR DV IDGN
Sbjct: 241 GLCEEAVRVFQNMVHVGEAIPNEATLVNVLSACSSISALHLGQWVHSYINSRHDVIIDGN 300

Query: 301 VGNALINMYVKCGNMEIAILIFKAIKHKDIITWSTITSGLAMNGLGKQAFVLFSLMLVHG 360
           VGNALINMYVKCGNME+AILIFKAI+HKDI++WSTI SGLAMNGLGKQAFVLFSLMLVHG
Sbjct: 301 VGNALINMYVKCGNMEMAILIFKAIEHKDIVSWSTIISGLAMNGLGKQAFVLFSLMLVHG 360

Query: 361 ISPDDITFLGLLSACSHGGLINQGTMVFEAMKDVYNISPQMRHYACMVDMYGKAGLLDEA 420
           +SPDDITFLGLLSACSHGGLINQG MVFEAMKDVYNISPQMRHYACMVDMYGKAGLLDEA
Sbjct: 361 VSPDDITFLGLLSACSHGGLINQGMMVFEAMKDVYNISPQMRHYACMVDMYGKAGLLDEA 420

Query: 421 EAFIKEMPMEAEGPVWGALLHACQIHGNEKKYEKVREWLLGSKGVTVGTFALLSNTYASC 480
           EAFIKEMPMEAEGPVWGALLHACQ+HGNEKKYEKVREWLLGSKGVTVGTFALLSNTYA C
Sbjct: 421 EAFIKEMPMEAEGPVWGALLHACQLHGNEKKYEKVREWLLGSKGVTVGTFALLSNTYACC 480

Query: 481 DRWDDANDVRDAMRNRGLKKMAGRSWIELVDPLNPL 504
           DRW+DANDVR AMR+RGLKKMAGRSWIE+VD   PL
Sbjct: 481 DRWNDANDVRVAMRSRGLKKMAGRSWIEMVDSTYPL 516

[Close]

BLAST of PI0014277 vs. NCBI nr
Match: TYK18848.1 (pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 937.9 bits (2423), Expect = 3.5e-269
Identity = 467/516 (90.50%), Postives = 485/516 (93.99%), Query Frame = 0


Query: 1   MPLKPLKPSISIAQFTQIHAKLRTNPKPHIFNPLLGSLVNSISPENGLFLYNQMLCYPSS 60
           MPLKPLKPSISIAQFTQIHAKL TNPKPHIFNPLLGSLVNSISPENGLFLYNQML YPSS
Sbjct: 106 MPLKPLKPSISIAQFTQIHAKLLTNPKPHIFNPLLGSLVNSISPENGLFLYNQMLHYPSS 165

Query: 61  HNHFTFTYALKACCLLHQTQKGLEIHAHLIKSGHLSDIFIQNSLLHFYILNGNVPSASLI 120
           HNHFTFTYALKACC LHQTQKGLEIHAHLIKSGHLSDIFIQNSLLHFYILNG+V SASLI
Sbjct: 166 HNHFTFTYALKACCFLHQTQKGLEIHAHLIKSGHLSDIFIQNSLLHFYILNGDVSSASLI 225

Query: 121 FDSIPDPDVVSWTSIISGLSKLGFEREALSKFLSMNVKPNSTTLVTALSACSSLRCLKIG 180
           FDSIP+PDVVSWTSIISGLSKLGFE+EAL KFLSMNV+PNSTTLVTALSACSSLRCLK+G
Sbjct: 226 FDSIPNPDVVSWTSIISGLSKLGFEKEALGKFLSMNVRPNSTTLVTALSACSSLRCLKLG 285

Query: 181 KAIHGLRLRTLNEENVSLDNALLDFYVRCAYLRSAEKLFEKMPKRDV------------- 240
           KAIHGLRLRTLNEENVSL+NALLDFYVRCAYLRSAE LFEKM KRDV             
Sbjct: 286 KAIHGLRLRTLNEENVSLENALLDFYVRCAYLRSAENLFEKMHKRDVVSWTTMIGGYAQS 345

Query: 241 GLCEEAVRVFQNMIHGGEAIPNEATLVNVLSACSSMSALHLGEWVHSYINSRQDVTIDGN 300
           GLCEEAVRVFQNM+H GEAIPNEATLVNVLSACSS+SALHLG+WVHSYINSR DV IDGN
Sbjct: 346 GLCEEAVRVFQNMVHVGEAIPNEATLVNVLSACSSISALHLGQWVHSYINSRHDVIIDGN 405

Query: 301 VGNALINMYVKCGNMEIAILIFKAIKHKDIITWSTITSGLAMNGLGKQAFVLFSLMLVHG 360
           VGNALINMYVKCGNME+AILIF AI+HKDII+WST+ SGLAMNGLGKQAFVLFSLMLVHG
Sbjct: 406 VGNALINMYVKCGNMEMAILIFNAIEHKDIISWSTVISGLAMNGLGKQAFVLFSLMLVHG 465

Query: 361 ISPDDITFLGLLSACSHGGLINQGTMVFEAMKDVYNISPQMRHYACMVDMYGKAGLLDEA 420
           ISPDDITFLGLLSACSHGGLINQG MVFEAMKDVYNISPQ+RHYACMVDMYGKAGLLDEA
Sbjct: 466 ISPDDITFLGLLSACSHGGLINQGMMVFEAMKDVYNISPQIRHYACMVDMYGKAGLLDEA 525

Query: 421 EAFIKEMPMEAEGPVWGALLHACQIHGNEKKYEKVREWLLGSKGVTVGTFALLSNTYASC 480
           EAFIKEMPMEAEGPVWGALLHACQIHGNEKKYEKVRE LLGSKGVTVG FALLSNTYASC
Sbjct: 526 EAFIKEMPMEAEGPVWGALLHACQIHGNEKKYEKVRECLLGSKGVTVGAFALLSNTYASC 585

Query: 481 DRWDDANDVRDAMRNRGLKKMAGRSWIELVDPLNPL 504
           DRW+DANDVR AMR+RGLKKMAG SWIELV+P NP+
Sbjct: 586 DRWNDANDVRVAMRSRGLKKMAGCSWIELVNPSNPV 621

[Close]

BLAST of PI0014277 vs. NCBI nr
Match: XP_008450427.1 (PREDICTED: pentatricopeptide repeat-containing protein At1g08070, chloroplastic-like isoform X1 [Cucumis melo] >XP_016900885.1 PREDICTED: pentatricopeptide repeat-containing protein At1g08070, chloroplastic-like isoform X1 [Cucumis melo] >XP_016900886.1 PREDICTED: pentatricopeptide repeat-containing protein At1g08070, chloroplastic-like isoform X1 [Cucumis melo])

HSP 1 Score: 933.7 bits (2412), Expect = 6.6e-268
Identity = 465/517 (89.94%), Postives = 484/517 (93.62%), Query Frame = 0


Query: 1   MPLKPLKPSISIAQFTQIHAKLRTNPKPHIFNPLLGSLVNSISPENGLFLYNQMLCYPSS 60
           MPLKPLKPSIS AQFTQIHAKL TNPKPHIFNPLLGSLVNSISPENGLFLYNQML YPSS
Sbjct: 1   MPLKPLKPSISFAQFTQIHAKLLTNPKPHIFNPLLGSLVNSISPENGLFLYNQMLHYPSS 60

Query: 61  HNHFTFTYALKACCLLHQTQKGLEIHAHLIKSGHLSDIFIQNSLLHFYILNGNVPSASLI 120
           HNHFTFTYALKACC LHQTQKGLEIHAHLIKSGHLSDIFIQNSLLHFYIL+G+V SASLI
Sbjct: 61  HNHFTFTYALKACCFLHQTQKGLEIHAHLIKSGHLSDIFIQNSLLHFYILHGDVSSASLI 120

Query: 121 FDSIPDPDVVSWTSIISGLSKLGFEREALSKFLSMNVKPNSTTLVTALSACSSLRCLKIG 180
           FDSIP+PDVVSWTSIISG SKLGFE+EAL KFLSMNV+PNSTTLVTALSACSSLR LK+G
Sbjct: 121 FDSIPNPDVVSWTSIISGFSKLGFEKEALGKFLSMNVRPNSTTLVTALSACSSLRRLKLG 180

Query: 181 KAIHGLRLRTLNEENVSLDNALLDFYVRCAYLRSAEKLFEKMPKRDV------------- 240
           KAIHGLRLRTLNEENVSL+NALLDFYVRCAYLRSAE LFEKM KRDV             
Sbjct: 181 KAIHGLRLRTLNEENVSLENALLDFYVRCAYLRSAENLFEKMHKRDVVSWTTMIGGYAQS 240

Query: 241 GLCEEAVRVFQNMIHGGEAIPNEATLVNVLSACSSMSALHLGEWVHSYINSRQDVTIDGN 300
           GLCEEAVRVFQNM+H GEAIPNEATLVNVLSACSS+SALHLG+WVHSYINSR DV IDGN
Sbjct: 241 GLCEEAVRVFQNMVHAGEAIPNEATLVNVLSACSSISALHLGQWVHSYINSRHDVIIDGN 300

Query: 301 VGNALINMYVKCGNMEIAILIFKAIKHKDIITWSTITSGLAMNGLGKQAFVLFSLMLVHG 360
           VGNALINMYVKCGNME+AILIFKAI+HKDII+WST+ SGLAMNGLGKQAFVLFSLMLVHG
Sbjct: 301 VGNALINMYVKCGNMEMAILIFKAIEHKDIISWSTVISGLAMNGLGKQAFVLFSLMLVHG 360

Query: 361 ISPDDITFLGLLSACSHGGLINQGTMVFEAMKDVYNISPQMRHYACMVDMYGKAGLLDEA 420
           ISPDDITFLGLLSACSHGGLINQG MVFEAMKDVYNISPQ+RHYACMVDMYGKAGLLDEA
Sbjct: 361 ISPDDITFLGLLSACSHGGLINQGMMVFEAMKDVYNISPQIRHYACMVDMYGKAGLLDEA 420

Query: 421 EAFIKEMPMEAEGPVWGALLHACQIHGNEKKYEKVREWLLGSKGVTVGTFALLSNTYASC 480
           EAFIKEMPMEAEGPVWGALLHACQIHGNEKKYEKVRE LLGSKGVTVG FALLSNTYASC
Sbjct: 421 EAFIKEMPMEAEGPVWGALLHACQIHGNEKKYEKVRECLLGSKGVTVGAFALLSNTYASC 480

Query: 481 DRWDDANDVRDAMRNRGLKKMAGRSWIELVDPLNPLG 505
           DRW+DANDVR AMR+RGLKKMAG SWIELV+P NP+G
Sbjct: 481 DRWNDANDVRVAMRSRGLKKMAGCSWIELVNPSNPVG 517

[Close]

BLAST of PI0014277 vs. NCBI nr
Match: XP_038878297.1 (pentatricopeptide repeat-containing protein At1g08070, chloroplastic-like [Benincasa hispida])

HSP 1 Score: 909.8 bits (2350), Expect = 1.0e-260
Identity = 449/517 (86.85%), Postives = 474/517 (91.68%), Query Frame = 0


Query: 1   MPLKPLKPSISIAQFTQIHAKLRTNPKPHIFNPLLGSLVNSISPENGLFLYNQMLCYPSS 60
           M LKP KPSI IAQ  QIH  L  NPKPHI NPLLGSLVNS+SPENGLFLYNQML YPSS
Sbjct: 1   MLLKPPKPSILIAQLAQIHTNLLINPKPHILNPLLGSLVNSVSPENGLFLYNQMLRYPSS 60

Query: 61  HNHFTFTYALKACCLLHQTQKGLEIHAHLIKSGHLSDIFIQNSLLHFYILNGNVPSASLI 120
           HNHFTFTYALKACC LH+TQKGLEIHAHLIKSGHLSDIF+QNSLLHFYIL+G+VPSAS I
Sbjct: 61  HNHFTFTYALKACCFLHETQKGLEIHAHLIKSGHLSDIFLQNSLLHFYILDGDVPSASRI 120

Query: 121 FDSIPDPDVVSWTSIISGLSKLGFEREALSKFLSMNVKPNSTTLVTALSACSSLRCLKIG 180
           FDSIPDPDV+SWTSIISGLSKLGFE+EAL KFLSMNV+PNSTTLVTALSACSSLRCLK+G
Sbjct: 121 FDSIPDPDVISWTSIISGLSKLGFEKEALGKFLSMNVRPNSTTLVTALSACSSLRCLKLG 180

Query: 181 KAIHGLRLRTLNEENVSLDNALLDFYVRCAYLRSAEKLFEKMPKRDV------------- 240
           KAIHGLRLR+LNEENVSLDNALLDFYVRC YLRSAE LF++MPKRDV             
Sbjct: 181 KAIHGLRLRSLNEENVSLDNALLDFYVRCGYLRSAEYLFDEMPKRDVVSWTTMIGGYAQR 240

Query: 241 GLCEEAVRVFQNMIHGGEAIPNEATLVNVLSACSSMSALHLGEWVHSYINSRQDVTIDGN 300
           GLCEEAVRVFQNM+H GEAIPNEATL+NVLSACSS+SALHLG+WVHSYINSR DV IDGN
Sbjct: 241 GLCEEAVRVFQNMVHVGEAIPNEATLINVLSACSSISALHLGQWVHSYINSRHDVIIDGN 300

Query: 301 VGNALINMYVKCGNMEIAILIFKAIKHKDIITWSTITSGLAMNGLGKQAFVLFSLMLVHG 360
           VGNALINMYVKCGNME+AILIFKAI+HKDII+WSTI SGLAMNGLG QAF LFSLMLVHG
Sbjct: 301 VGNALINMYVKCGNMEMAILIFKAIEHKDIISWSTIISGLAMNGLGNQAFGLFSLMLVHG 360

Query: 361 ISPDDITFLGLLSACSHGGLINQGTMVFEAMKDVYNISPQMRHYACMVDMYGKAGLLDEA 420
           ISPDDITFL LLSACSHGGLINQG MVFEAMKDVYNISPQMRHYACMVD+YGKAGLLDEA
Sbjct: 361 ISPDDITFLSLLSACSHGGLINQGLMVFEAMKDVYNISPQMRHYACMVDLYGKAGLLDEA 420

Query: 421 EAFIKEMPMEAEGPVWGALLHACQIHGNEKKYEKVREWLLGSKGVTVGTFALLSNTYASC 480
           EAFIKEMPMEAEG VWGALLHACQIHGNEKKYEKV+EWLLGSKGVTVGTFALLSNTYASC
Sbjct: 421 EAFIKEMPMEAEGSVWGALLHACQIHGNEKKYEKVKEWLLGSKGVTVGTFALLSNTYASC 480

Query: 481 DRWDDANDVRDAMRNRGLKKMAGRSWIELVDPLNPLG 505
           DRW+DAN+VRD MR++GLKKMAG SWIELVD  N LG
Sbjct: 481 DRWNDANEVRDTMRSKGLKKMAGCSWIELVDSSNSLG 517

[Close]

BLAST of PI0014277 vs. NCBI nr
Match: XP_011660134.1 (pentatricopeptide repeat-containing protein At1g08070, chloroplastic isoform X2 [Cucumis sativus])

HSP 1 Score: 864.0 bits (2231), Expect = 6.4e-247
Identity = 435/516 (84.30%), Postives = 452/516 (87.60%), Query Frame = 0


Query: 1   MPLKPLKPSISIAQFTQIHAKLRTNPKPHIFNPLLGSLVNSISPENGLFLYNQMLCYPSS 60
           MPLKPLKPSISIAQFTQIHAKL TNPKPHIFNPLLGSLVNSI PENGLFLYNQML YPSS
Sbjct: 1   MPLKPLKPSISIAQFTQIHAKLLTNPKPHIFNPLLGSLVNSIFPENGLFLYNQMLRYPSS 60

Query: 61  HNHFTFTYALKACCLLHQTQKGLEIHAHLIKSGHLSDIFIQNSLLHFYILNGNVPSASLI 120
           HNHFTFTYALKACC LHQTQKGLEIHAHLIKS                            
Sbjct: 61  HNHFTFTYALKACCFLHQTQKGLEIHAHLIKS---------------------------- 120

Query: 121 FDSIPDPDVVSWTSIISGLSKLGFEREALSKFLSMNVKPNSTTLVTALSACSSLRCLKIG 180
                  DVVSWTSIISGLSKLGFE+EALSKFLSMNV+PNSTTLVTALSACSSLRCLK+G
Sbjct: 121 -------DVVSWTSIISGLSKLGFEKEALSKFLSMNVRPNSTTLVTALSACSSLRCLKLG 180

Query: 181 KAIHGLRLRTLNEENVSLDNALLDFYVRCAYLRSAEKLFEKMPKRDV------------- 240
           KAIHGLR+RTLNEENV L+NALLDFYVRCAYLRSAE LFEKMPKRDV             
Sbjct: 181 KAIHGLRMRTLNEENVILENALLDFYVRCAYLRSAENLFEKMPKRDVVSWTTMIGGYAQS 240

Query: 241 GLCEEAVRVFQNMIHGGEAIPNEATLVNVLSACSSMSALHLGEWVHSYINSRQDVTIDGN 300
           GLCEEAVRVFQNM+H GEAIPNEATLVNVLSACSS+SALHLG+WVHSYINSR DV IDGN
Sbjct: 241 GLCEEAVRVFQNMVHVGEAIPNEATLVNVLSACSSISALHLGQWVHSYINSRHDVIIDGN 300

Query: 301 VGNALINMYVKCGNMEIAILIFKAIKHKDIITWSTITSGLAMNGLGKQAFVLFSLMLVHG 360
           VGNALINMYVKCGNME+AILIFKAI+HKDI++WSTI SGLAMNGLGKQAFVLFSLMLVHG
Sbjct: 301 VGNALINMYVKCGNMEMAILIFKAIEHKDIVSWSTIISGLAMNGLGKQAFVLFSLMLVHG 360

Query: 361 ISPDDITFLGLLSACSHGGLINQGTMVFEAMKDVYNISPQMRHYACMVDMYGKAGLLDEA 420
           +SPDDITFLGLLSACSHGGLINQG MVFEAMKDVYNISPQMRHYACMVDMYGKAGLLDEA
Sbjct: 361 VSPDDITFLGLLSACSHGGLINQGMMVFEAMKDVYNISPQMRHYACMVDMYGKAGLLDEA 420

Query: 421 EAFIKEMPMEAEGPVWGALLHACQIHGNEKKYEKVREWLLGSKGVTVGTFALLSNTYASC 480
           EAFIKEMPMEAEGPVWGALLHACQ+HGNEKKYEKVREWLLGSKGVTVGTFALLSNTYA C
Sbjct: 421 EAFIKEMPMEAEGPVWGALLHACQLHGNEKKYEKVREWLLGSKGVTVGTFALLSNTYACC 480

Query: 481 DRWDDANDVRDAMRNRGLKKMAGRSWIELVDPLNPL 504
           DRW+DANDVR AMR+RGLKKMAGRSWIE+VD   PL
Sbjct: 481 DRWNDANDVRVAMRSRGLKKMAGRSWIEMVDSTYPL 481

[Close]

BLAST of PI0014277 vs. TAIR 10
Match: AT1G08070.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 337.4 bits (864), Expect = 1.9e-92
Identity = 185/519 (35.65%), Postives = 289/519 (55.68%), Query Frame = 0


Query: 26  PKPHIFNPLLGSLVNSISPENGLFLYNQMLCYPSSHNHFTFTYALKACCLLHQTQKGLEI 85
           P   I+N +      S  P + L LY  M+      N +TF + LK+C      ++G +I
Sbjct: 97  PNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQI 156

Query: 86  HAHLIKSGHLSDIFIQNSLLHFYILNGN-------------------------------V 145
           H H++K G   D+++  SL+  Y+ NG                                +
Sbjct: 157 HGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYI 216

Query: 146 PSASLIFDSIPDPDVVSWTSIISGLSKLGFEREALSKFLSM---NVKPNSTTLVTALSAC 205
            +A  +FD IP  DVVSW ++ISG ++ G  +EAL  F  M   NV+P+ +T+VT +SAC
Sbjct: 217 ENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSAC 276

Query: 206 SSLRCLKIGKAIHGLRLRTLNEENVSLDNALLDFYVRCAYLRSAEKLFEKMPKRDV---- 265
           +    +++G+ +H          N+ + NAL+D Y +C  L +A  LFE++P +DV    
Sbjct: 277 AQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWN 336

Query: 266 ---------GLCEEAVRVFQNMIHGGEAIPNEATLVNVLSACSSMSALHLGEWVHSYINS 325
                     L +EA+ +FQ M+  GE  PN+ T++++L AC+ + A+ +G W+H YI+ 
Sbjct: 337 TLIGGYTHMNLYKEALLLFQEMLRSGET-PNDVTMLSILPACAHLGAIDIGRWIHVYIDK 396

Query: 326 R-QDVTIDGNVGNALINMYVKCGNMEIAILIFKAIKHKDIITWSTITSGLAMNGLGKQAF 385
           R + VT   ++  +LI+MY KCG++E A  +F +I HK + +W+ +  G AM+G    +F
Sbjct: 397 RLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASF 456

Query: 386 VLFSLMLVHGISPDDITFLGLLSACSHGGLINQGTMVFEAMKDVYNISPQMRHYACMVDM 445
            LFS M   GI PDDITF+GLLSACSH G+++ G  +F  M   Y ++P++ HY CM+D+
Sbjct: 457 DLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDL 516

Query: 446 YGKAGLLDEAEAFIKEMPMEAEGPVWGALLHACQIHGNEKKYEKVREWLLGSKGVTVGTF 497
            G +GL  EAE  I  M ME +G +W +LL AC++HGN +  E   E L+  +    G++
Sbjct: 517 LGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPENPGSY 576

[Close]

BLAST of PI0014277 vs. TAIR 10
Match: AT4G38010.1 (Pentatricopeptide repeat (PPR-like) superfamily protein )

HSP 1 Score: 321.2 bits (822), Expect = 1.4e-87
Identity = 179/480 (37.29%), Postives = 272/480 (56.67%), Query Frame = 0


Query: 31  FNPLLGSLVNSISPENGLFLYNQMLCYPSSHNHFTFTYALKACCLLHQTQKGLEIHAHLI 90
           +N LL S      P   +F Y   +    S + FTF    KAC      ++G +IH  + 
Sbjct: 74  YNTLLSSYAVCDKPRVTIFAYKTFVSNGFSPDMFTFPPVFKACGKFSGIREGKQIHGIVT 133

Query: 91  KSGHLSDIFIQNSLLHFYILNGNVPSASLIFDSIPDPDVVSWTSIISGLSKLGFEREALS 150
           K G   DI++QNSL+HFY + G   +A  +F  +P  DVVSWT II+G ++ G  +EAL 
Sbjct: 134 KMGFYDDIYVQNSLVHFYGVCGESRNACKVFGEMPVRDVVSWTGIITGFTRTGLYKEALD 193

Query: 151 KFLSMNVKPNSTTLVTALSACSSLRCLKIGKAIHGLRLRTLNEENVSLDNALLDFYVRCA 210
            F  M+V+PN  T V  L +   + CL +GK IHGL L+  +  ++   NAL+D YV+C 
Sbjct: 194 TFSKMDVEPNLATYVCVLVSSGRVGCLSLGKGIHGLILKRASLISLETGNALIDMYVKCE 253

Query: 211 YLRSAEKLFEKMPKRD--------VGL--CE---EAVRVFQNMIHGGEAIPNEATLVNVL 270
            L  A ++F ++ K+D         GL  CE   EA+ +F  M       P+   L +VL
Sbjct: 254 QLSDAMRVFGELEKKDKVSWNSMISGLVHCERSKEAIDLFSLMQTSSGIKPDGHILTSVL 313

Query: 271 SACSSMSALHLGEWVHSYINSRQDVTIDGNVGNALINMYVKCGNMEIAILIFKAIKHKDI 330
           SAC+S+ A+  G WVH YI +   +  D ++G A+++MY KCG +E A+ IF  I+ K++
Sbjct: 314 SACASLGAVDHGRWVHEYILT-AGIKWDTHIGTAIVDMYAKCGYIETALEIFNGIRSKNV 373

Query: 331 ITWSTITSGLAMNGLGKQAFVLFSLMLVHGISPDDITFLGLLSACSHGGLINQGTMVFEA 390
            TW+ +  GLA++G G ++   F  M+  G  P+ +TFL  L+AC H GL+++G   F  
Sbjct: 374 FTWNALLGGLAIHGHGLESLRYFEEMVKLGFKPNLVTFLAALNACCHTGLVDEGRRYFHK 433

Query: 391 MKD-VYNISPQMRHYACMVDMYGKAGLLDEAEAFIKEMPMEAEGPVWGALLHACQIHGNE 450
           MK   YN+ P++ HY CM+D+  +AGLLDEA   +K MP++ +  + GA+L AC+  G  
Sbjct: 434 MKSREYNLFPKLEHYGCMIDLLCRAGLLDEALELVKAMPVKPDVRICGAILSACKNRGTL 493

Query: 451 KKYEK-VREWLLGSKGVTVGTFALLSNTYASCDRWDDANDVRDAMRNRGLKKMAGRSWIE 496
            +  K + +  L  +    G + LLSN +A+  RWDD   +R  M+ +G+ K+ G S+IE
Sbjct: 494 MELPKEILDSFLDIEFEDSGVYVLLSNIFAANRRWDDVARIRRLMKVKGISKVPGSSYIE 552

[Close]

BLAST of PI0014277 vs. TAIR 10
Match: AT1G50270.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 310.8 bits (795), Expect = 2.0e-84
Identity = 170/456 (37.28%), Postives = 269/456 (58.99%), Query Frame = 0


Query: 58  PSSHNHFTFTYALKACCLLHQTQKGLEIHAHLIKSGHLSDIFIQNSLLHFYILNGNVPSA 117
           PS H   TF   LKA   L  +    + HAH++K G  SD F++NSL+  Y  +G    A
Sbjct: 102 PSRH---TFPPLLKAVFKLRDSNP-FQFHAHIVKFGLDSDPFVRNSLISGYSSSGLFDFA 161

Query: 118 SLIFDSIPDPDVVSWTSIISGLSKLGFEREALSKFLSM---NVKPNSTTLVTALSACSSL 177
           S +FD   D DVV+WT++I G  + G   EA+  F+ M    V  N  T+V+ L A   +
Sbjct: 162 SRLFDGAEDKDVVTWTAMIDGFVRNGSASEAMVYFVEMKKTGVAANEMTVVSVLKAAGKV 221

Query: 178 RCLKIGKAIHGLRLRTLNEE-NVSLDNALLDFYVRCAYLRSAEKLFEKMPKRDV------ 237
             ++ G+++HGL L T   + +V + ++L+D Y +C+    A+K+F++MP R+V      
Sbjct: 222 EDVRFGRSVHGLYLETGRVKCDVFIGSSLVDMYGKCSCYDDAQKVFDEMPSRNVVTWTAL 281

Query: 238 ------GLC-EEAVRVFQNMIHGGEAIPNEATLVNVLSACSSMSALHLGEWVHSYINSRQ 297
                   C ++ + VF+ M+   +  PNE TL +VLSAC+ + ALH G  VH Y+  + 
Sbjct: 282 IAGYVQSRCFDKGMLVFEEMLK-SDVAPNEKTLSSVLSACAHVGALHRGRRVHCYM-IKN 341

Query: 298 DVTIDGNVGNALINMYVKCGNMEIAILIFKAIKHKDIITWSTITSGLAMNGLGKQAFVLF 357
            + I+   G  LI++YVKCG +E AIL+F+ +  K++ TW+ + +G A +G  + AF LF
Sbjct: 342 SIEINTTAGTTLIDLYVKCGCLEEAILVFERLHEKNVYTWTAMINGFAAHGYARDAFDLF 401

Query: 358 SLMLVHGISPDDITFLGLLSACSHGGLINQGTMVFEAMKDVYNISPQMRHYACMVDMYGK 417
             ML   +SP+++TF+ +LSAC+HGGL+ +G  +F +MK  +N+ P+  HYACMVD++G+
Sbjct: 402 YTMLSSHVSPNEVTFMAVLSACAHGGLVEEGRRLFLSMKGRFNMEPKADHYACMVDLFGR 461

Query: 418 AGLLDEAEAFIKEMPMEAEGPVWGALLHACQIHGNEKKYEKVREWLLGSKGVTVGTFALL 477
            GLL+EA+A I+ MPME    VWGAL  +C +H + +  +     ++  +    G + LL
Sbjct: 462 KGLLEEAKALIERMPMEPTNVVWGALFGSCLLHKDYELGKYAASRVIKLQPSHSGRYTLL 521

Query: 478 SNTYASCDRWDDANDVRDAMRNRGLKKMAGRSWIEL 497
           +N Y+    WD+   VR  M+++ + K  G SWIE+
Sbjct: 522 ANLYSESQNWDEVARVRKQMKDQQVVKSPGFSWIEV 551

[Close]

BLAST of PI0014277 vs. TAIR 10
Match: AT2G13600.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 305.8 bits (782), Expect = 6.3e-83
Identity = 168/488 (34.43%), Postives = 261/488 (53.48%), Query Frame = 0


Query: 62  NHFTFTYALKACCLLHQTQKGLEIHAHLIKSGHLSDIFIQNSLLHFYILNGNVPSASLIF 121
           N ++F   L AC  L+   KG+++H+ + KS  LSD++I ++L+  Y   GNV  A  +F
Sbjct: 151 NEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVF 210

Query: 122 DSIPDPDVVSWTSIISGLSKLGFEREALSKF---LSMNVKPNSTTLVTALSACSSLRCLK 181
           D + D +VVSW S+I+   + G   EAL  F   L   V+P+  TL + +SAC+SL  +K
Sbjct: 211 DEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIK 270

Query: 182 IGKAIHGLRLRTLNEEN-VSLDNALLDFYVRCAYLRSAEKLFEKMPKRDV---------- 241
           +G+ +HG  ++     N + L NA +D Y +C+ ++ A  +F+ MP R+V          
Sbjct: 271 VGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGY 330

Query: 242 ----------------------------------GLCEEAVRVFQNMIHGGEAIPNEATL 301
                                             G  EEA+ +F  ++      P   + 
Sbjct: 331 AMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLF-CLLKRESVCPTHYSF 390

Query: 302 VNVLSACSSMSALHLGEWVHSYI-----NSRQDVTIDGNVGNALINMYVKCGNMEIAILI 361
            N+L AC+ ++ LHLG   H ++       +     D  VGN+LI+MYVKCG +E   L+
Sbjct: 391 ANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLV 450

Query: 362 FKAIKHKDIITWSTITSGLAMNGLGKQAFVLFSLMLVHGISPDDITFLGLLSACSHGGLI 421
           F+ +  +D ++W+ +  G A NG G +A  LF  ML  G  PD IT +G+LSAC H G +
Sbjct: 451 FRKMMERDCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIGVLSACGHAGFV 510

Query: 422 NQGTMVFEAMKDVYNISPQMRHYACMVDMYGKAGLLDEAEAFIKEMPMEAEGPVWGALLH 481
            +G   F +M   + ++P   HY CMVD+ G+AG L+EA++ I+EMPM+ +  +WG+LL 
Sbjct: 511 EEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGSLLA 570

Query: 482 ACQIHGNEKKYEKVREWLLGSKGVTVGTFALLSNTYASCDRWDDANDVRDAMRNRGLKKM 497
           AC++H N    + V E LL  +    G + LLSN YA   +W+D  +VR +MR  G+ K 
Sbjct: 571 ACKVHRNITLGKYVAEKLLEVEPSNSGPYVLLSNMYAELGKWEDVMNVRKSMRKEGVTKQ 630

[Close]

BLAST of PI0014277 vs. TAIR 10
Match: AT2G22410.1 (SLOW GROWTH 1 )

HSP 1 Score: 302.8 bits (774), Expect = 5.3e-82
Identity = 177/522 (33.91%), Postives = 277/522 (53.07%), Query Frame = 0


Query: 25  NPKPHIFNPLLGSLVNSISPENGLFLYNQML---CYPSSHNHFTFTYALKACCLLHQTQK 84
           NP    +N  +     S +P+    LY QML   C  S  +HFT+    K C  L  +  
Sbjct: 115 NPNIFSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVCADLRLSSL 174

Query: 85  GLEIHAHLIKSGHLSDIFIQNSLLHFYILNGNVPSASLIFDSIPDPDVVSWTSIISGLSK 144
           G  I  H++K        + N+ +H +   G++ +A  +FD  P  D+VSW  +I+G  K
Sbjct: 175 GHMILGHVLKLRLELVSHVHNASIHMFASCGDMENARKVFDESPVRDLVSWNCLINGYKK 234

Query: 145 LGFEREALSKFLSM---NVKPNSTTLVTALSACSSLRCLKIGKAIH------GLRLR--- 204
           +G   +A+  +  M    VKP+  T++  +S+CS L  L  GK  +      GLR+    
Sbjct: 235 IGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIPL 294

Query: 205 ------------TLNEENVSLDN----------ALLDFYVRCAYLRSAEKLFEKMPKRDV 264
                        ++E     DN           ++  Y RC  L  + KLF+ M ++DV
Sbjct: 295 VNALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEEKDV 354

Query: 265 GLC-------------EEAVRVFQNMIHGGEAIPNEATLVNVLSACSSMSALHLGEWVHS 324
            L              ++A+ +FQ M       P+E T+++ LSACS + AL +G W+H 
Sbjct: 355 VLWNAMIGGSVQAKRGQDALALFQEM-QTSNTKPDEITMIHCLSACSQLGALDVGIWIHR 414

Query: 325 YINSRQDVTIDGNVGNALINMYVKCGNMEIAILIFKAIKHKDIITWSTITSGLAMNGLGK 384
           YI  +  ++++  +G +L++MY KCGN+  A+ +F  I+ ++ +T++ I  GLA++G   
Sbjct: 415 YI-EKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQTRNSLTYTAIIGGLALHGDAS 474

Query: 385 QAFVLFSLMLVHGISPDDITFLGLLSACSHGGLINQGTMVFEAMKDVYNISPQMRHYACM 444
            A   F+ M+  GI+PD+ITF+GLLSAC HGG+I  G   F  MK  +N++PQ++HY+ M
Sbjct: 475 TAISYFNEMIDAGIAPDEITFIGLLSACCHGGMIQTGRDYFSQMKSRFNLNPQLKHYSIM 534

Query: 445 VDMYGKAGLLDEAEAFIKEMPMEAEGPVWGALLHACQIHGNEKKYEKVREWLLGSKGVTV 497
           VD+ G+AGLL+EA+  ++ MPMEA+  VWGALL  C++HGN +  EK  + LL       
Sbjct: 535 VDLLGRAGLLEEADRLMESMPMEADAAVWGALLFGCRMHGNVELGEKAAKKLLELDPSDS 594

The following BLAST results are available for this feature:

BLAST of PI0014277 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LN01	2.7e-91	35.65	Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidop...	[more]
Q9SZK1	2.0e-86	37.29	Pentatricopeptide repeat-containing protein At4g38010 OS=Arabidopsis thaliana OX...	[more]
Q9SX45	2.7e-83	37.28	Pentatricopeptide repeat-containing protein At1g50270 OS=Arabidopsis thaliana OX...	[more]
Q9SIT7	8.8e-82	34.43	Pentatricopeptide repeat-containing protein At2g13600 OS=Arabidopsis thaliana OX...	[more]
Q9SJZ3	7.5e-81	33.91	Pentatricopeptide repeat-containing protein At2g22410, mitochondrial OS=Arabidop...	[more]

BLAST of PI0014277 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LXJ1	1.8e-271	90.50	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G613550 PE=4 SV=1	[more]
A0A5D3D5L6	1.7e-269	90.50	Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A1S4DY27	3.2e-268	89.94	pentatricopeptide repeat-containing protein At1g08070, chloroplastic-like isofor...	[more]
A0A6J1H7Z9	1.4e-244	80.66	pentatricopeptide repeat-containing protein At1g08070, chloroplastic-like isofor...	[more]
A0A1S4DY30	1.4e-244	83.95	pentatricopeptide repeat-containing protein At1g08070, chloroplastic-like isofor...	[more]

BLAST of PI0014277 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011660133.1	3.7e-271	90.50	pentatricopeptide repeat-containing protein At1g08070, chloroplastic isoform X1 ...	[more]
TYK18848.1	3.5e-269	90.50	pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa]	[more]
XP_008450427.1	6.6e-268	89.94	PREDICTED: pentatricopeptide repeat-containing protein At1g08070, chloroplastic-...	[more]
XP_038878297.1	1.0e-260	86.85	pentatricopeptide repeat-containing protein At1g08070, chloroplastic-like [Benin...	[more]
XP_011660134.1	6.4e-247	84.30	pentatricopeptide repeat-containing protein At1g08070, chloroplastic isoform X2 ...	[more]

BLAST of PI0014277 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G08070.1	1.9e-92	35.65	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT4G38010.1	1.4e-87	37.29	Pentatricopeptide repeat (PPR-like) superfamily protein	[more]
AT1G50270.1	2.0e-84	37.28	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT2G13600.1	6.3e-83	34.43	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT2G22410.1	5.3e-82	33.91	SLOW GROWTH 1	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 391..414 e-value: 5.9E-4 score: 17.8 coord: 318..351 e-value: 2.4E-4 score: 19.1
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 391..415 e-value: 6.5E-4 score: 19.8 coord: 200..226 e-value: 0.056 score: 13.7 coord: 130..155 e-value: 0.0019 score: 18.3
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 315..363 e-value: 2.6E-7 score: 30.8
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 316..350 score: 9.766576
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 387..421 score: 8.692369
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 378..487 e-value: 4.8E-6 score: 28.2
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 29..195 e-value: 2.8E-21 score: 78.2 coord: 226..377 e-value: 1.4E-26 score: 95.6
None	No IPR available	PANTHER	PTHR47928	REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED	coord: 51..495
None	No IPR available	PANTHER	PTHR47928:SF138	OS03G0216400 PROTEIN	coord: 51..495

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0014277.1	PI0014277.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:1900865	chloroplast RNA modification
cellular_component	GO:0009507	chloroplast
molecular_function	GO:0005515	protein binding