PI0014170 (gene) Melon (PI 482460) v1

Overview


Name	PI0014170
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Aspartyl/glutamyl-tRNA (Asn/Gln) amidotransferase subunit B
Location	chr05: 21389366 .. 21391722 (-)
RNA-Seq Expression	PI0014170
Synteny	PI0014170

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

TCCGGCTACGAGCTACGGCGAAGGTGAGTACAAAGTCATTTTTCTTTGTCCGGCCGTCCTCCTCGGCGTGTTCTTTGGTTTTACTGTTTTTTGGGTGTGCCCCAGTTCCCCGATTCTCTCTCTTTTCTTGTTGTCGTGAATATTCAAATGGCGAAGAAAAGAATCCATACGCCCATTTACAAGTAACCACTGTTTGTGCTCTCTGCCAGAAAAATTCAAGTATTCAGTACCATTCTCTTTTTGGGTTCTGTTTTTTTTCTCATTCCAGTGAGAATCCAGCGTTTTCTAGGAGAATTTTACTCTATTCAACTGTTTTCTCGTGCTTTGTTTCTTCTATCTGCAAATTCAGCTGTTGTTTCAATTAATTAGATTCGGAAGGAATTCGATATGAATGGATTCAGAATTTTGTGCCAATTATAGTTCATATACATGTAGTGATGAGAATTTTGGCATTGGGTTAGGGTTTTTGAAAGTTAGATTTTTGTTGGTTGGCTTTGGGTCTGTGGTGTATGTTTGTAGGCTGTATGAATTCAAGTTATTTGCATTCTGTTTCTGTTTGGTTAATCACTCCCCCTCAAACACGCTGTTGTGAAAATTATTTGTACTCTGAATTCTGAATGATCTGCCTTTATTGTGGTTCATAATTCATATCTGTAAAGTTATGGACTGGAAGGCAAGCTGGTCTTGAGAACTCCATTTGACTAGTTACATGTTTGTTTGACACTTGTTGAAATGTATTGCAGGCATTGTTCTTTTCTTGATTTGCCTGTTTTTCATCTGAACATCTCTTGAATTGTACTTCACTCTGCATCCTTCATGAGTTTGTGTTATTTCTTTACTCCATTGTTTATGATTTCCTTTGTATGTTGGTAAAATTTTATTTTTACTTTTAGTCCAGATTTTGTGAACATTAAATATCTTGCTGATGTAGTTGGTTTTGCAATTAGCCTGCTATTTAATATTTTGCTCTTATCAAAATACCAACAACTTCAAATGTCAAGTCAAGGGTGTTAGGCCTGAGCTGCTGTGAATTCTTCTTTTTCTTTATACACATGCGTGCAAGCCTTTCATGTTATTTTGTTGTCATGCTACTAGTTGCTATTATTATGAATGGCTGACAAGAGAGTTTGGTTCTGTGCCTTGGCTTTAATGTTCCTCTATGCCAGTGCATGGATATATCATATATGTATGTGGAACTTCACACTTCTTTGCTTGTTCAGATGCTTGCTGTCATTTTTAAAGTAATTTTGTTCTAACCATCATTAGTGTTCACAGCTTATCAAATTATTTAGAACCTTCATCATATGAATATGTAAAAAACAATCCTCACGAGTTGGCCTTGTAGTAAATAGGGGGTATGACATTAATAAAGAGCTAAAAGAGGTCATGGATTCAATTCATCGTTTCTGACTACCTATCTAGGATTTAATATTCTACAAATTTCCTTGACGTCCAAATGTTGTAGGTTCAGGTGGATTGTCTCACGTCGAGGAGTGTGTAAGTTGGCGTGGACATTCATGGTTCTTAAAAAATTGAAATGTGTAAAAAACCTTTGTTTTGAGAATCTAATTTCTTTGCTATAGGCTAATCTTTTACCTTATTTGTTATTTCCTAATTGTTTGTAGAGACTTTGCTTTGATATGAGTTTTGTGTTTTCAGCTTCTTTGGCTAACCTTACATGGGAAACAAACCCGTGAAGCAACCACAGGAAGAAATTTTCTTGAAGATAGTACCTCCTTTGGACCAAGCATATGTTAGATGGCTTGCTCGTGATCTCGAGAGGATTCATGGCTTCACCCCAAGAAATCCTCGTGCCGTGAAGCCTCCCGATCACTACATAGAGTTCATGCGCTTGAATGGATGGTTGGACTTGAGCTTAGATGATCCAGATCTGGCACGTTTACTCAAATAG

mRNA sequence

TCCGGCTACGAGCTACGGCGAAGGTGAGTACAAAGTCATTTTTCTTTGTCCGGCCGTCCTCCTCGGCGTGTTCTTTGGTTTTACTGTTTTTTGGGTGTGCCCCAGTTCCCCGATTCTCTCTCTTTTCTTGTTGTCGTGAATATTCAAATGGCGAAGAAAAGAATCCATACGCCCATTTACAAGTAACCACTGTTTGTGCTCTCTGCCAGAAAAATTCAACTTCTTTGGCTAACCTTACATGGGAAACAAACCCGTGAAGCAACCACAGGAAGAAATTTTCTTGAAGATAGTACCTCCTTTGGACCAAGCATATGTTAGATGGCTTGCTCGTGATCTCGAGAGGATTCATGGCTTCACCCCAAGAAATCCTCGTGCCGTGAAGCCTCCCGATCACTACATAGAGTTCATGCGCTTGAATGGATGGTTGGACTTGAGCTTAGATGATCCAGATCTGGCACGTTTACTCAAATAG

Coding sequence (CDS)

ATGGGAAACAAACCCGTGAAGCAACCACAGGAAGAAATTTTCTTGAAGATAGTACCTCCTTTGGACCAAGCATATGTTAGATGGCTTGCTCGTGATCTCGAGAGGATTCATGGCTTCACCCCAAGAAATCCTCGTGCCGTGAAGCCTCCCGATCACTACATAGAGTTCATGCGCTTGAATGGATGGTTGGACTTGAGCTTAGATGATCCAGATCTGGCACGTTTACTCAAATAG

Protein sequence

MGNKPVKQPQEEIFLKIVPPLDQAYVRWLARDLERIHGFTPRNPRAVKPPDHYIEFMRLNGWLDLSLDDPDLARLLK

Homology

[Close]

BLAST of PI0014170 vs. ExPASy TrEMBL
Match: A0A5A7V7T4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold212G001040 PE=4 SV=1)

HSP 1 Score: 164.1 bits (414), Expect = 2.3e-37
Identity = 73/77 (94.81%), Postives = 76/77 (98.70%), Query Frame = 0


Query: 1  MGNKPVKQPQEEIFLKIVPPLDQAYVRWLARDLERIHGFTPRNPRAVKPPDHYIEFMRLN 60
          MGN+PVKQPQEE+FLKIVPPLDQ YVRWLARDLERIHGFTPRNPRAVKPPDHYIEFMRLN
Sbjct: 1  MGNRPVKQPQEEVFLKIVPPLDQTYVRWLARDLERIHGFTPRNPRAVKPPDHYIEFMRLN 60

Query: 61 GWLDLSLDDPDLARLLK 78
          GWLD+SLDDPDLARLLK
Sbjct: 61 GWLDVSLDDPDLARLLK 77

[Close]

BLAST of PI0014170 vs. ExPASy TrEMBL
Match: A0A1S4DYB2 (uncharacterized protein LOC103491432 OS=Cucumis melo OX=3656 GN=LOC103491432 PE=4 SV=1)

HSP 1 Score: 161.4 bits (407), Expect = 1.5e-36
Identity = 73/77 (94.81%), Postives = 75/77 (97.40%), Query Frame = 0


Query: 1  MGNKPVKQPQEEIFLKIVPPLDQAYVRWLARDLERIHGFTPRNPRAVKPPDHYIEFMRLN 60
          MGNKPVKQPQEE+FLKIVPPLDQ YVRWLARDLERIHGFT RNPRAVKPPDHYIEFMRLN
Sbjct: 1  MGNKPVKQPQEEVFLKIVPPLDQTYVRWLARDLERIHGFTLRNPRAVKPPDHYIEFMRLN 60

Query: 61 GWLDLSLDDPDLARLLK 78
          GWLD+SLDDPDLARLLK
Sbjct: 61 GWLDVSLDDPDLARLLK 77

[Close]

BLAST of PI0014170 vs. ExPASy TrEMBL
Match: A0A5D3BAZ5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold182G00250 PE=4 SV=1)

HSP 1 Score: 161.4 bits (407), Expect = 1.5e-36
Identity = 73/77 (94.81%), Postives = 75/77 (97.40%), Query Frame = 0


Query: 1  MGNKPVKQPQEEIFLKIVPPLDQAYVRWLARDLERIHGFTPRNPRAVKPPDHYIEFMRLN 60
          MGNKPVKQPQEE+FLKIVPPLDQ YVRWLARDLERIHGFT RNPRAVKPPDHYIEFMRLN
Sbjct: 1  MGNKPVKQPQEEVFLKIVPPLDQTYVRWLARDLERIHGFTLRNPRAVKPPDHYIEFMRLN 60

Query: 61 GWLDLSLDDPDLARLLK 78
          GWLD+SLDDPDLARLLK
Sbjct: 61 GWLDVSLDDPDLARLLK 77

[Close]

BLAST of PI0014170 vs. ExPASy TrEMBL
Match: A0A6J1DJ99 (uncharacterized protein LOC111020571 OS=Momordica charantia OX=3673 GN=LOC111020571 PE=4 SV=1)

HSP 1 Score: 154.1 bits (388), Expect = 2.4e-34
Identity = 72/80 (90.00%), Postives = 74/80 (92.50%), Query Frame = 0


Query: 1  MGNKPVKQPQ---EEIFLKIVPPLDQAYVRWLARDLERIHGFTPRNPRAVKPPDHYIEFM 60
          MGNKPVKQ +   EEIFLKIVPPLDQAYVRWLARDLERIHGFTPRNPRAVKPPDHYIEFM
Sbjct: 1  MGNKPVKQQEVQREEIFLKIVPPLDQAYVRWLARDLERIHGFTPRNPRAVKPPDHYIEFM 60

Query: 61 RLNGWLDLSLDDPDLARLLK 78
          RLNGWLD+SLDDPDLA L K
Sbjct: 61 RLNGWLDVSLDDPDLAHLFK 80

[Close]

BLAST of PI0014170 vs. ExPASy TrEMBL
Match: A0A438DCX1 (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=CK203_085320 PE=4 SV=1)

HSP 1 Score: 152.9 bits (385), Expect = 5.4e-34
Identity = 67/77 (87.01%), Postives = 74/77 (96.10%), Query Frame = 0


Query: 1  MGNKPVKQPQEEIFLKIVPPLDQAYVRWLARDLERIHGFTPRNPRAVKPPDHYIEFMRLN 60
          MGNKPVK+ +EEIFLKIVPPLD+AYVRWLARDLERIHGFTP+NPRAVKPPDHYIE+MRLN
Sbjct: 1  MGNKPVKEEKEEIFLKIVPPLDRAYVRWLARDLERIHGFTPKNPRAVKPPDHYIEYMRLN 60

Query: 61 GWLDLSLDDPDLARLLK 78
          GWLD++LDDPDLA L K
Sbjct: 61 GWLDVNLDDPDLAHLFK 77

[Close]

BLAST of PI0014170 vs. NCBI nr
Match: KAA0061729.1 (uncharacterized protein E6C27_scaffold212G001040 [Cucumis melo var. makuwa])

HSP 1 Score: 164.1 bits (414), Expect = 4.8e-37
Identity = 73/77 (94.81%), Postives = 76/77 (98.70%), Query Frame = 0


Query: 1  MGNKPVKQPQEEIFLKIVPPLDQAYVRWLARDLERIHGFTPRNPRAVKPPDHYIEFMRLN 60
          MGN+PVKQPQEE+FLKIVPPLDQ YVRWLARDLERIHGFTPRNPRAVKPPDHYIEFMRLN
Sbjct: 1  MGNRPVKQPQEEVFLKIVPPLDQTYVRWLARDLERIHGFTPRNPRAVKPPDHYIEFMRLN 60

Query: 61 GWLDLSLDDPDLARLLK 78
          GWLD+SLDDPDLARLLK
Sbjct: 61 GWLDVSLDDPDLARLLK 77

[Close]

BLAST of PI0014170 vs. NCBI nr
Match: XP_016900705.1 (PREDICTED: uncharacterized protein LOC103491432 [Cucumis melo] >XP_016900706.1 PREDICTED: uncharacterized protein LOC103491432 [Cucumis melo] >TYJ96066.1 uncharacterized protein E5676_scaffold182G00250 [Cucumis melo var. makuwa])

HSP 1 Score: 161.4 bits (407), Expect = 3.1e-36
Identity = 73/77 (94.81%), Postives = 75/77 (97.40%), Query Frame = 0


Query: 1  MGNKPVKQPQEEIFLKIVPPLDQAYVRWLARDLERIHGFTPRNPRAVKPPDHYIEFMRLN 60
          MGNKPVKQPQEE+FLKIVPPLDQ YVRWLARDLERIHGFT RNPRAVKPPDHYIEFMRLN
Sbjct: 1  MGNKPVKQPQEEVFLKIVPPLDQTYVRWLARDLERIHGFTLRNPRAVKPPDHYIEFMRLN 60

Query: 61 GWLDLSLDDPDLARLLK 78
          GWLD+SLDDPDLARLLK
Sbjct: 61 GWLDVSLDDPDLARLLK 77

[Close]

BLAST of PI0014170 vs. NCBI nr
Match: XP_022152955.1 (uncharacterized protein LOC111020571 [Momordica charantia] >XP_022152956.1 uncharacterized protein LOC111020571 [Momordica charantia])

HSP 1 Score: 154.1 bits (388), Expect = 5.0e-34
Identity = 72/80 (90.00%), Postives = 74/80 (92.50%), Query Frame = 0


Query: 1  MGNKPVKQPQ---EEIFLKIVPPLDQAYVRWLARDLERIHGFTPRNPRAVKPPDHYIEFM 60
          MGNKPVKQ +   EEIFLKIVPPLDQAYVRWLARDLERIHGFTPRNPRAVKPPDHYIEFM
Sbjct: 1  MGNKPVKQQEVQREEIFLKIVPPLDQAYVRWLARDLERIHGFTPRNPRAVKPPDHYIEFM 60

Query: 61 RLNGWLDLSLDDPDLARLLK 78
          RLNGWLD+SLDDPDLA L K
Sbjct: 61 RLNGWLDVSLDDPDLAHLFK 80

[Close]

BLAST of PI0014170 vs. NCBI nr
Match: CBI28268.3 (unnamed protein product, partial [Vitis vinifera])

HSP 1 Score: 152.9 bits (385), Expect = 1.1e-33
Identity = 67/77 (87.01%), Postives = 74/77 (96.10%), Query Frame = 0


Query: 1   MGNKPVKQPQEEIFLKIVPPLDQAYVRWLARDLERIHGFTPRNPRAVKPPDHYIEFMRLN 60
           MGNKPVK+ +EEIFLKIVPPLD+AYVRWLARDLERIHGFTP+NPRAVKPPDHYIE+MRLN
Sbjct: 105 MGNKPVKEEKEEIFLKIVPPLDRAYVRWLARDLERIHGFTPKNPRAVKPPDHYIEYMRLN 164

Query: 61  GWLDLSLDDPDLARLLK 78
           GWLD++LDDPDLA L K
Sbjct: 165 GWLDVNLDDPDLAHLFK 181

[Close]

BLAST of PI0014170 vs. NCBI nr
Match: XP_038901668.1 (uncharacterized protein LOC120088440 [Benincasa hispida] >XP_038901669.1 uncharacterized protein LOC120088440 [Benincasa hispida] >XP_038901671.1 uncharacterized protein LOC120088440 [Benincasa hispida] >XP_038901672.1 uncharacterized protein LOC120088440 [Benincasa hispida])

HSP 1 Score: 152.9 bits (385), Expect = 1.1e-33
Identity = 71/80 (88.75%), Postives = 74/80 (92.50%), Query Frame = 0


Query: 1  MGNKPVKQPQE---EIFLKIVPPLDQAYVRWLARDLERIHGFTPRNPRAVKPPDHYIEFM 60
          MGN+ VKQPQE   EIFLKIVPPLDQAY+RWLARDLERIHGFTPRNPRAVKPPDHYIEFM
Sbjct: 1  MGNRAVKQPQEQRGEIFLKIVPPLDQAYLRWLARDLERIHGFTPRNPRAVKPPDHYIEFM 60

Query: 61 RLNGWLDLSLDDPDLARLLK 78
          RLNGWLD+SLDDPDLA L K
Sbjct: 61 RLNGWLDVSLDDPDLAHLFK 80

[Close]

BLAST of PI0014170 vs. TAIR 10
Match: AT5G22210.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 115.5 bits (288), Expect = 1.8e-26
Identity = 55/80 (68.75%), Postives = 65/80 (81.25%), Query Frame = 0


Query: 1  MGNK--PVKQPQEEIFLKIVPPLDQAYVRWLARDLERIHGFTPR-NPRAVKPPDHYIEFM 60
          MGNK   VK+ +EEI LKIVPPLD+ ++RWLARDL+R+HGF P+ N RA+ PPD YIEFM
Sbjct: 1  MGNKATTVKEEREEIHLKIVPPLDKVFLRWLARDLQRVHGFKPKNNTRAITPPDSYIEFM 60

Query: 61 RLNGWLDLSLDDPDLARLLK 78
          RLNG LD+ LDDPDLA L K
Sbjct: 61 RLNGSLDVDLDDPDLAHLFK 80

[Close]

BLAST of PI0014170 vs. TAIR 10
Match: AT5G22210.2 (unknown protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 115.5 bits (288), Expect = 1.8e-26
Identity = 55/80 (68.75%), Postives = 65/80 (81.25%), Query Frame = 0


Query: 1  MGNK--PVKQPQEEIFLKIVPPLDQAYVRWLARDLERIHGFTPR-NPRAVKPPDHYIEFM 60
          MGNK   VK+ +EEI LKIVPPLD+ ++RWLARDL+R+HGF P+ N RA+ PPD YIEFM
Sbjct: 1  MGNKATTVKEEREEIHLKIVPPLDKVFLRWLARDLQRVHGFKPKNNTRAITPPDSYIEFM 60

Query: 61 RLNGWLDLSLDDPDLARLLK 78
          RLNG LD+ LDDPDLA L K
Sbjct: 61 RLNGSLDVDLDDPDLAHLFK 80

The following BLAST results are available for this feature:

BLAST of PI0014170 vs.


Match Name	E-value	Identity	Description

BLAST of PI0014170 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7V7T4	2.3e-37	94.81	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A1S4DYB2	1.5e-36	94.81	uncharacterized protein LOC103491432 OS=Cucumis melo OX=3656 GN=LOC103491432 PE=...	[more]
A0A5D3BAZ5	1.5e-36	94.81	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A6J1DJ99	2.4e-34	90.00	uncharacterized protein LOC111020571 OS=Momordica charantia OX=3673 GN=LOC111020...	[more]
A0A438DCX1	5.4e-34	87.01	Uncharacterized protein OS=Vitis vinifera OX=29760 GN=CK203_085320 PE=4 SV=1	[more]

BLAST of PI0014170 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0061729.1	4.8e-37	94.81	uncharacterized protein E6C27_scaffold212G001040 [Cucumis melo var. makuwa]	[more]
XP_016900705.1	3.1e-36	94.81	PREDICTED: uncharacterized protein LOC103491432 [Cucumis melo] >XP_016900706.1 P...	[more]
XP_022152955.1	5.0e-34	90.00	uncharacterized protein LOC111020571 [Momordica charantia] >XP_022152956.1 uncha...	[more]
CBI28268.3	1.1e-33	87.01	unnamed protein product, partial [Vitis vinifera]	[more]
XP_038901668.1	1.1e-33	88.75	uncharacterized protein LOC120088440 [Benincasa hispida] >XP_038901669.1 unchara...	[more]

BLAST of PI0014170 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G22210.1	1.8e-26	68.75	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-termin...	[more]
AT5G22210.2	1.8e-26	68.75	unknown protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae ...	[more]

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0014170.2	PI0014170.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0007049	cell cycle
biological_process	GO:0051301	cell division
biological_process	GO:0010020	chloroplast fission
biological_process	GO:0006357	regulation of transcription by RNA polymerase II
cellular_component	GO:0032153	cell division site
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0005634	nucleus
cellular_component	GO:0005667	transcription regulator complex
molecular_function	GO:0003924	GTPase activity
molecular_function	GO:0005525	GTP binding
molecular_function	GO:0046983	protein dimerization activity
molecular_function	GO:0000978	RNA polymerase II cis-regulatory region sequence-specific DNA binding
molecular_function	GO:0016740	transferase activity