PI0014090 (gene) Melon (PI 482460) v1

Overview


Name	PI0014090
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Unknown protein
Location	chr05: 20658937 .. 20659589 (-)
RNA-Seq Expression	PI0014090
Synteny	PI0014090

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTGAGTTGGCACATTGCAATTGGTCCAAAAAAGGCGAGAAGAAAGTCCCCACAAAAGATGTTTAAATTCCTACATAATTTCACTTCGCTCCCAAAACCCAAAAATCGCGCCTTTCAAAAAAACATCTCCCCCTCCTTCTCCGACCAAAATTTTCATTTTCATTTTCACCTTCAAATTCCAAATTCCTTCAAAACCAAAACCCCCAATCTTCAAAACAAAAATGTTTCCTATTTCAATTCCCACCAGAATGTCTCCCATTTTTCATCCTCACTATAAACATCCATTTTCCCCTTTCCTCTCCTTACCCGACTTCACTTCTCATTCTCATTCTCATTCTCATTCCTTCTTCGCCGTCTTCCATGGAGTTCGCCGCCGTCCGTTTCCACTCCGATAAGGAAAATCTTCCCCCGTTTACCCATAAGTTACACCCTTCAATTCCAAAGAAACCGATCATCCGAAGGAGATTAAATCGGAAGCCGCTTCTCGATATAACCAATTCATTTGAAAATACTGTTCGATTCGGTTCGATTCAAGATGGATTTATCTCATCTGTTGAATCGGTTTGTTTGCCGTCAAATTCCAGGAAGAGGAAAGCTGGTGATGAAGTTTTTTCTGGAACAGCCAAATCGCTCAGAATGGGATTCAGATAA

mRNA sequence

ATGCTGAGTTGGCACATTGCAATTGGTCCAAAAAAGGCGAGAAGAAAGTCCCCACAAAAGATGTTTAAATTCCTACATAATTTCACTTCGCTCCCAAAACCCAAAAATCAATGTCTCCCATTTTTCATCCTCACTATAAACATCCATTTTCCCCTTTCCTCTCCTTACCCGACTTCACTTCTCATTCTCATTCTCATTCTCATTCCTTCTTCGCCGTCTTCCATGGAGTTCGCCGCCGTCCGTTTCCACTCCGATAAGGAAAATCTTCCCCCGTTTACCCATAAGTTACACCCTTCAATTCCAAAGAAACCGATCATCCGAAGGAGATTAAATCGGAAGCCGCTTCTCGATATAACCAATTCATTTGAAAATACTGTTCGATTCGGTTCGATTCAAGATGGATTTATCTCATCTGTTGAATCGGTTTGTTTGCCGTCAAATTCCAGGAAGAGGAAAGCTGGTGATGAAGTTTTTTCTGGAACAGCCAAATCGCTCAGAATGGGATTCAGATAA

Coding sequence (CDS)

ATGCTGAGTTGGCACATTGCAATTGGTCCAAAAAAGGCGAGAAGAAAGTCCCCACAAAAGATGTTTAAATTCCTACATAATTTCACTTCGCTCCCAAAACCCAAAAATCAATGTCTCCCATTTTTCATCCTCACTATAAACATCCATTTTCCCCTTTCCTCTCCTTACCCGACTTCACTTCTCATTCTCATTCTCATTCTCATTCCTTCTTCGCCGTCTTCCATGGAGTTCGCCGCCGTCCGTTTCCACTCCGATAAGGAAAATCTTCCCCCGTTTACCCATAAGTTACACCCTTCAATTCCAAAGAAACCGATCATCCGAAGGAGATTAAATCGGAAGCCGCTTCTCGATATAACCAATTCATTTGAAAATACTGTTCGATTCGGTTCGATTCAAGATGGATTTATCTCATCTGTTGAATCGGTTTGTTTGCCGTCAAATTCCAGGAAGAGGAAAGCTGGTGATGAAGTTTTTTCTGGAACAGCCAAATCGCTCAGAATGGGATTCAGATAA

Protein sequence

MLSWHIAIGPKKARRKSPQKMFKFLHNFTSLPKPKNQCLPFFILTINIHFPLSSPYPTSLLILILILIPSSPSSMEFAAVRFHSDKENLPPFTHKLHPSIPKKPIIRRRLNRKPLLDITNSFENTVRFGSIQDGFISSVESVCLPSNSRKRKAGDEVFSGTAKSLRMGFR

Homology

[Close]

BLAST of PI0014090 vs. ExPASy TrEMBL
Match: A0A0A0KE31 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G419520 PE=4 SV=1)

HSP 1 Score: 248.1 bits (632), Expect = 2.7e-62
Identity = 133/170 (78.24%), Postives = 141/170 (82.94%), Query Frame = 0


Query: 1   MLSWHIAIGPKKARRKSPQKMFKFLHNFTSLPKPKNQCLPFFILTINIHFPLSSPYPTSL 60
           MLSWHIAIGPK+ + KSP+K FK             Q LPFFILTIN HFPLSSP   SL
Sbjct: 1   MLSWHIAIGPKRRKEKSPRK-FK-----------SQQSLPFFILTINTHFPLSSPDSASL 60

Query: 61  LILILILIPSSPSSMEFAAVRFHSDKENLPPFTHKLHPSIPKKPIIRRRLNRKPLLDITN 120
             LIL  IPSSPSSMEF+AVRFHSDKENLPPFTHKL+PSIPKKP IRRRLNRKPLLDITN
Sbjct: 61  --LILTPIPSSPSSMEFSAVRFHSDKENLPPFTHKLYPSIPKKPTIRRRLNRKPLLDITN 120

Query: 121 SFENTVRFGSIQDGFISSVESVCLPSNSRKRKAGDEVFSGTAKSLRMGFR 171
           SFENT+R GSIQDGFI+SVESVCL  NSRKRKAGDEV+SGTAKSLRMGFR
Sbjct: 121 SFENTIRLGSIQDGFIASVESVCLQPNSRKRKAGDEVYSGTAKSLRMGFR 156

[Close]

BLAST of PI0014090 vs. ExPASy TrEMBL
Match: A0A1Q3C6Z4 (Uncharacterized protein (Fragment) OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_19465 PE=4 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 5.0e-08
Identity = 50/109 (45.87%), Postives = 61/109 (55.96%), Query Frame = 0


Query: 73  SSMEFAAVRFHSDKENLPPFTHKL-------HPSIPKKPIIRRRLNRKPLLDITNSFENT 132
           S ME   +  + +KEN+PPF+ K         PS  K P  +RR  RKPL DITN F N+
Sbjct: 6   SPMEAITLSDNYNKENIPPFSPKQANPVPVNAPSFKKIPTCKRRF-RKPLADITNLFNNS 65

Query: 133 VRFGSIQDG----FISSVESVCLPSNSRKRKAGDEVFSGTAKSLRMGFR 171
           V   S Q+       S   SVC P N+RKRKA   V S ++KSLRMGFR
Sbjct: 66  VSSSSTQESISLLLSSPPVSVCAP-NARKRKA---VGSSSSKSLRMGFR 109

[Close]

BLAST of PI0014090 vs. ExPASy TrEMBL
Match: A0A6J5UAF7 (Uncharacterized protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS20443 PE=4 SV=1)

HSP 1 Score: 60.1 bits (144), Expect = 1.1e-05
Identity = 52/120 (43.33%), Postives = 62/120 (51.67%), Query Frame = 0


Query: 75  MEFAAVRFHSDKENLPPFTHKLHPSIP--------KKPIIRRRLNRKPLLDITN--SFEN 134
           ME +A R+HS+KENLPP +   + + P        KK   + RL RKPL DITN   + N
Sbjct: 1   MEASACRYHSNKENLPPSSAMANLTNPVPENGSSSKKCNKKTRLRRKPLADITNLYIYGN 60

Query: 135 TVRFG------SIQDGFISSVESVC-LPSNSRKRKAGDE-------VFSGTAKSLRMGFR 171
              FG      S    F SS  SV    SNSRKRK+  E       V S  +KSLRMGFR
Sbjct: 61  QSSFGLSDHLPSATLPFSSSSSSVSGSASNSRKRKSTQEDNTNSSKVNSSNSKSLRMGFR 120

[Close]

BLAST of PI0014090 vs. ExPASy TrEMBL
Match: A0A2C9URL6 (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_13G138400 PE=4 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 3.1e-05
Identity = 45/111 (40.54%), Postives = 61/111 (54.95%), Query Frame = 0


Query: 75  MEFAA--VRFHSDKENLPPFTHKLHPSIP-----KKPIIRRRLNRKPLLDITNSFENTVR 134
           MEF A     HS+KEN+PPF+ K    IP      K   RRR+ R+PL DIT  + ++V+
Sbjct: 1   MEFTAKLCDHHSNKENIPPFSAKPANPIPASVASSKKKFRRRI-REPLEDITYFYRSSVQ 60

Query: 135 FGSIQ-DGFISSVESVCLPSNSRKRKAGDE-------VFSGTAKSLRMGFR 171
               Q D  +S++      SNS+KRKA D+       V   ++KSLR GFR
Sbjct: 61  LALAQEDDSLSAISVSGSASNSKKRKASDQENEDTGAVAGPSSKSLRFGFR 110

[Close]

BLAST of PI0014090 vs. ExPASy TrEMBL
Match: A0A7N2R9E8 (Uncharacterized protein OS=Quercus lobata OX=97700 PE=4 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 4.0e-05
Identity = 39/99 (39.39%), Postives = 55/99 (55.56%), Query Frame = 0


Query: 84  SDKENLPPFTHKLHPSIPKKPIIRRRLN----RKPLLDITNSFENTVRFGSIQDG---FI 143
           ++KEN+PPF+ K    +P   +  ++ N    RKPL DITN F ++ +  S+ +     +
Sbjct: 10  NNKENIPPFSTKRANPVPANALSSKKTNKRRLRKPLADITNLFYDSFQPSSVPESVYLLL 69

Query: 144 SSVESVCLPSNSRKRKA-----GDEVFSGTAKSLRMGFR 171
           SS  S    SN RKRKA       EV +  +KSLRMGFR
Sbjct: 70  SSSASSVSVSNPRKRKATLKTGSVEVATSNSKSLRMGFR 108

[Close]

BLAST of PI0014090 vs. NCBI nr
Match: KGN47955.1 (hypothetical protein Csa_002785 [Cucumis sativus])

HSP 1 Score: 248.1 bits (632), Expect = 5.6e-62
Identity = 133/170 (78.24%), Postives = 141/170 (82.94%), Query Frame = 0


Query: 1   MLSWHIAIGPKKARRKSPQKMFKFLHNFTSLPKPKNQCLPFFILTINIHFPLSSPYPTSL 60
           MLSWHIAIGPK+ + KSP+K FK             Q LPFFILTIN HFPLSSP   SL
Sbjct: 1   MLSWHIAIGPKRRKEKSPRK-FK-----------SQQSLPFFILTINTHFPLSSPDSASL 60

Query: 61  LILILILIPSSPSSMEFAAVRFHSDKENLPPFTHKLHPSIPKKPIIRRRLNRKPLLDITN 120
             LIL  IPSSPSSMEF+AVRFHSDKENLPPFTHKL+PSIPKKP IRRRLNRKPLLDITN
Sbjct: 61  --LILTPIPSSPSSMEFSAVRFHSDKENLPPFTHKLYPSIPKKPTIRRRLNRKPLLDITN 120

Query: 121 SFENTVRFGSIQDGFISSVESVCLPSNSRKRKAGDEVFSGTAKSLRMGFR 171
           SFENT+R GSIQDGFI+SVESVCL  NSRKRKAGDEV+SGTAKSLRMGFR
Sbjct: 121 SFENTIRLGSIQDGFIASVESVCLQPNSRKRKAGDEVYSGTAKSLRMGFR 156

[Close]

BLAST of PI0014090 vs. NCBI nr
Match: KAG6589263.1 (hypothetical protein SDJN03_17828, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 126.3 bits (316), Expect = 2.5e-25
Identity = 68/96 (70.83%), Postives = 74/96 (77.08%), Query Frame = 0


Query: 75  MEFAAVRFHSDKENLPPFTHKLHPSIPKKPIIRRRLNRKPLLDITNSFENTVRFGSIQDG 134
           MEFAAVRF S KENLP  + K  P   KKPI RRRLNRKPL DITNSFE++VRF  +QD 
Sbjct: 1   MEFAAVRFPSGKENLPLLSQKQFPPNQKKPITRRRLNRKPLADITNSFESSVRFSFVQD- 60

Query: 135 FISSVESVCLPSNSRKRKAGDEVFSGTAKSLRMGFR 171
              SVESVCL  NS+KRKA DE+ SGTAKSLRMGFR
Sbjct: 61  HSGSVESVCLQLNSKKRKAADEICSGTAKSLRMGFR 95

[Close]

BLAST of PI0014090 vs. NCBI nr
Match: GAV75989.1 (hypothetical protein CFOL_v3_19465, partial [Cephalotus follicularis])

HSP 1 Score: 67.8 bits (164), Expect = 1.0e-07
Identity = 50/109 (45.87%), Postives = 61/109 (55.96%), Query Frame = 0


Query: 73  SSMEFAAVRFHSDKENLPPFTHKL-------HPSIPKKPIIRRRLNRKPLLDITNSFENT 132
           S ME   +  + +KEN+PPF+ K         PS  K P  +RR  RKPL DITN F N+
Sbjct: 6   SPMEAITLSDNYNKENIPPFSPKQANPVPVNAPSFKKIPTCKRRF-RKPLADITNLFNNS 65

Query: 133 VRFGSIQDG----FISSVESVCLPSNSRKRKAGDEVFSGTAKSLRMGFR 171
           V   S Q+       S   SVC P N+RKRKA   V S ++KSLRMGFR
Sbjct: 66  VSSSSTQESISLLLSSPPVSVCAP-NARKRKA---VGSSSSKSLRMGFR 109

[Close]

BLAST of PI0014090 vs. NCBI nr
Match: CAB4273203.1 (unnamed protein product [Prunus armeniaca])

HSP 1 Score: 60.1 bits (144), Expect = 2.2e-05
Identity = 52/120 (43.33%), Postives = 62/120 (51.67%), Query Frame = 0


Query: 75  MEFAAVRFHSDKENLPPFTHKLHPSIP--------KKPIIRRRLNRKPLLDITN--SFEN 134
           ME +A R+HS+KENLPP +   + + P        KK   + RL RKPL DITN   + N
Sbjct: 1   MEASACRYHSNKENLPPSSAMANLTNPVPENGSSSKKCNKKTRLRRKPLADITNLYIYGN 60

Query: 135 TVRFG------SIQDGFISSVESVC-LPSNSRKRKAGDE-------VFSGTAKSLRMGFR 171
              FG      S    F SS  SV    SNSRKRK+  E       V S  +KSLRMGFR
Sbjct: 61  QSSFGLSDHLPSATLPFSSSSSSVSGSASNSRKRKSTQEDNTNSSKVNSSNSKSLRMGFR 120

[Close]

BLAST of PI0014090 vs. NCBI nr
Match: OAY33953.1 (hypothetical protein MANES_13G138400v8 [Manihot esculenta])

HSP 1 Score: 58.5 bits (140), Expect = 6.3e-05
Identity = 45/111 (40.54%), Postives = 61/111 (54.95%), Query Frame = 0


Query: 75  MEFAA--VRFHSDKENLPPFTHKLHPSIP-----KKPIIRRRLNRKPLLDITNSFENTVR 134
           MEF A     HS+KEN+PPF+ K    IP      K   RRR+ R+PL DIT  + ++V+
Sbjct: 1   MEFTAKLCDHHSNKENIPPFSAKPANPIPASVASSKKKFRRRI-REPLEDITYFYRSSVQ 60

Query: 135 FGSIQ-DGFISSVESVCLPSNSRKRKAGDE-------VFSGTAKSLRMGFR 171
               Q D  +S++      SNS+KRKA D+       V   ++KSLR GFR
Sbjct: 61  LALAQEDDSLSAISVSGSASNSKKRKASDQENEDTGAVAGPSSKSLRFGFR 110

The following BLAST results are available for this feature:

BLAST of PI0014090 vs.


Match Name	E-value	Identity	Description

BLAST of PI0014090 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KE31	2.7e-62	78.24	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G419520 PE=4 SV=1	[more]
A0A1Q3C6Z4	5.0e-08	45.87	Uncharacterized protein (Fragment) OS=Cephalotus follicularis OX=3775 GN=CFOL_v3...	[more]
A0A6J5UAF7	1.1e-05	43.33	Uncharacterized protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS20443 PE=4 S...	[more]
A0A2C9URL6	3.1e-05	40.54	Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_13G138400 PE=4 SV=...	[more]
A0A7N2R9E8	4.0e-05	39.39	Uncharacterized protein OS=Quercus lobata OX=97700 PE=4 SV=1	[more]

BLAST of PI0014090 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN47955.1	5.6e-62	78.24	hypothetical protein Csa_002785 [Cucumis sativus]	[more]
KAG6589263.1	2.5e-25	70.83	hypothetical protein SDJN03_17828, partial [Cucurbita argyrosperma subsp. sorori...	[more]
GAV75989.1	1.0e-07	45.87	hypothetical protein CFOL_v3_19465, partial [Cephalotus follicularis]	[more]
CAB4273203.1	2.2e-05	43.33	unnamed protein product [Prunus armeniaca]	[more]
OAY33953.1	6.3e-05	40.54	hypothetical protein MANES_13G138400v8 [Manihot esculenta]	[more]

BLAST of PI0014090 vs. NCBI nr


Match Name	E-value	Identity	Description

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0014090.1	PI0014090.1	mRNA