PI0013879 (gene) Melon (PI 482460) v1

Overview


Name	PI0013879
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Chlorophyll a-b binding protein, chloroplastic
Location	chr03: 1357546 .. 1358936 (+)
RNA-Seq Expression	PI0013879
Synteny	PI0013879

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGGTTTCAATTTCAGCAGCCACTGCCTTCCATCTGCACCCTTCTTCTTCATCTTACACCCCCTTATTCAACCCTAACCAGTTCCTCCGCCTCCGATCGCCTTCCCGCCGCACACTATTAATAGCTCATGCCCAATCGGAGCACCGCCAAACATGGCTTCCCGGCCTCGACCCTCCACCGCATCTCGATGGAACCCTTGCCGGCGATTTTGGATTCGACCCACTTGGGCTCGGCGAAGACCCACATAGCTTGAAGTGGTACGTTCAAGCAGAGCTTGTTCATTGCCGCTTCGCCATGCTCGGCGTCTCTGGAATTCTTCTTACTGATGTCTGTAACCAATTAGTCTTACATTACCTCTCAATAATTGCACAACATTGGAAACCTTAAATTAAAGATTGATGTTCTTTGTGTCGTGGCAGTTGCTTCGTGTTACAGGGATCAGTGAATTGCCAGTTTGGTATAATGCCGGTGCCGTTGAATATGGTTTTGCCAACAAACGAACTCTTTTCATTGTTCAGCTGCTTTTGATGGGGTTCTAATTCTTCCTTATCCTCCATTTCCTTTCTTGAGGTGTGGCTGTATTCATCACTTTATCTGGTTTTACTTGGCTTTGAAGGTTTGTGGAAACTAAAAGGTATATGGATTTCAAAAGCCCTGGATCTCAAGCACAAGAAGGAACTTTCTTTGGATTAGAAGCTGCTTTTGAAGGTCTCGAGCCCGGGTAATTTACATTTCTCTTGAAATTCTTAGAATGTTAGATAAAAAATTGCAACATGAAACAGAGTGCCGAAACCTAACTTTCAAAATGATATGGTATCGTCCATTTTGGGTATAACCTTTCAATTCTATACCAAGGCACCGTCTTACTATTCTCAATCTCAATTTTTGTGTAACATTCTATCAAAACTCATATTTTGAAGGTAGTTTTGAAACGGACATAAAAAGTGGAAGGAAGGAGTATGGAATTTTTTAAAATAAAGGATCTGAAGTTTATAGGATGCTCTTTTGATCATTTTACCAACTAGAATGCCCCAGAATATGAACAGTTTTGACTTTGAGGGATGATTAACTTGCAGATACCCTGGGGGTCCTCTGTTGAATCCTCTTGGCATTGCTAAAGATATCAAGAATGCTCATGACTGGAAACTCAAGGAGATTAAGAATGGTTAAATTTTCCACTCACATTCTCATCAAATTTTTCGTCTGTCTTTTTCTCGGATTAATCATTGTTTGGTCAAATTCCAGGACGGCTTGCGATGGTAGCCATGCTTGGGATCTTTGTGCAAGCTTATGTTACTCATACAGGGCCAATAGATAACCTTGTGGAGCACCTTTCTAATCCATGGCACAAGACTATTATCCAGACACTTTCAAGCTCAAGCCCTTAA

mRNA sequence

ATGGCGGTTTCAATTTCAGCAGCCACTGCCTTCCATCTGCACCCTTCTTCTTCATCTTACACCCCCTTATTCAACCCTAACCAGTTCCTCCGCCTCCGATCGCCTTCCCGCCGCACACTATTAATAGCTCATGCCCAATCGGAGCACCGCCAAACATGGCTTCCCGGCCTCGACCCTCCACCGCATCTCGATGGAACCCTTGCCGGCGATTTTGGATTCGACCCACTTGGGCTCGGCGAAGACCCACATAGCTTGAAGTGGTACGTTCAAGCAGAGCTTGTTCATTGCCGCTTCGCCATGCTCGGCGTCTCTGGAATTCTTCTTACTGATTTGCTTCGTGTTACAGGGATCAGTGAATTGCCAGTTTGGTATAATGCCGGTGCCGTTGAATATGGTTTTGCCAACAAACGAACTCTTTTCATTGTTCAGCTGCTTTTGATGGGGTTTGTGGAAACTAAAAGGTATATGGATTTCAAAAGCCCTGGATCTCAAGCACAAGAAGGAACTTTCTTTGGATTAGAAGCTGCTTTTGAAGGTCTCGAGCCCGGATACCCTGGGGGTCCTCTGTTGAATCCTCTTGGCATTGCTAAAGATATCAAGAATGCTCATGACTGGAAACTCAAGGAGATTAAGAATGGACGGCTTGCGATGGTAGCCATGCTTGGGATCTTTGTGCAAGCTTATGTTACTCATACAGGGCCAATAGATAACCTTGTGGAGCACCTTTCTAATCCATGGCACAAGACTATTATCCAGACACTTTCAAGCTCAAGCCCTTAA

Coding sequence (CDS)

ATGGCGGTTTCAATTTCAGCAGCCACTGCCTTCCATCTGCACCCTTCTTCTTCATCTTACACCCCCTTATTCAACCCTAACCAGTTCCTCCGCCTCCGATCGCCTTCCCGCCGCACACTATTAATAGCTCATGCCCAATCGGAGCACCGCCAAACATGGCTTCCCGGCCTCGACCCTCCACCGCATCTCGATGGAACCCTTGCCGGCGATTTTGGATTCGACCCACTTGGGCTCGGCGAAGACCCACATAGCTTGAAGTGGTACGTTCAAGCAGAGCTTGTTCATTGCCGCTTCGCCATGCTCGGCGTCTCTGGAATTCTTCTTACTGATTTGCTTCGTGTTACAGGGATCAGTGAATTGCCAGTTTGGTATAATGCCGGTGCCGTTGAATATGGTTTTGCCAACAAACGAACTCTTTTCATTGTTCAGCTGCTTTTGATGGGGTTTGTGGAAACTAAAAGGTATATGGATTTCAAAAGCCCTGGATCTCAAGCACAAGAAGGAACTTTCTTTGGATTAGAAGCTGCTTTTGAAGGTCTCGAGCCCGGATACCCTGGGGGTCCTCTGTTGAATCCTCTTGGCATTGCTAAAGATATCAAGAATGCTCATGACTGGAAACTCAAGGAGATTAAGAATGGACGGCTTGCGATGGTAGCCATGCTTGGGATCTTTGTGCAAGCTTATGTTACTCATACAGGGCCAATAGATAACCTTGTGGAGCACCTTTCTAATCCATGGCACAAGACTATTATCCAGACACTTTCAAGCTCAAGCCCTTAA

Protein sequence

MAVSISAATAFHLHPSSSSYTPLFNPNQFLRLRSPSRRTLLIAHAQSEHRQTWLPGLDPPPHLDGTLAGDFGFDPLGLGEDPHSLKWYVQAELVHCRFAMLGVSGILLTDLLRVTGISELPVWYNAGAVEYGFANKRTLFIVQLLLMGFVETKRYMDFKSPGSQAQEGTFFGLEAAFEGLEPGYPGGPLLNPLGIAKDIKNAHDWKLKEIKNGRLAMVAMLGIFVQAYVTHTGPIDNLVEHLSNPWHKTIIQTLSSSSP

Homology

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BLAST of PI0013879 vs. ExPASy Swiss-Prot
Match: Q9C639 (Photosystem I chlorophyll a/b-binding protein 5, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=LHCA5 PE=1 SV=1)

HSP 1 Score: 370.5 bits (950), Expect = 1.5e-101
Identity = 173/210 (82.38%), Postives = 190/210 (90.48%), Query Frame = 0


Query: 50  RQTWLPGLDPPPHLDGTLAGDFGFDPLGLGEDPHSLKWYVQAELVHCRFAMLGVSGILLT 109
           R TWLPGL+PPP+LDG LAGD+GFDPLGLGEDP SLKWYVQAELVH RFAMLGV+GIL T
Sbjct: 46  RATWLPGLNPPPYLDGNLAGDYGFDPLGLGEDPESLKWYVQAELVHSRFAMLGVAGILFT 105

Query: 110 DLLRVTGISELPVWYNAGAVEYGFANKRTLFIVQLLLMGFVETKRYMDFKSPGSQAQEGT 169
           DLLR TGI  LPVWY AGAV++ FA+ +TL +VQ LLMGF ETKRYMDF SPGSQA+EG+
Sbjct: 106 DLLRTTGIRNLPVWYEAGAVKFDFASTKTLIVVQFLLMGFAETKRYMDFVSPGSQAKEGS 165

Query: 170 -FFGLEAAFEGLEPGYPGGPLLNPLGIAKDIKNAHDWKLKEIKNGRLAMVAMLGIFVQAY 229
            FFGLEAA EGLEPGYPGGPLLNPLG+AKD++NAHDWKLKEIKNGRLAM+AMLG FVQA 
Sbjct: 166 FFFGLEAALEGLEPGYPGGPLLNPLGLAKDVQNAHDWKLKEIKNGRLAMMAMLGFFVQAS 225

Query: 230 VTHTGPIDNLVEHLSNPWHKTIIQTLSSSS 259
           VTHTGPIDNLVEHLSNPWHKTIIQTL +S+
Sbjct: 226 VTHTGPIDNLVEHLSNPWHKTIIQTLFTST 255

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BLAST of PI0013879 vs. ExPASy Swiss-Prot
Match: Q9SQL2 (Chlorophyll a-b binding protein P4, chloroplastic OS=Pisum sativum OX=3888 GN=lhcA-P4 PE=1 SV=1)

HSP 1 Score: 208.0 bits (528), Expect = 1.3e-52
Identity = 106/207 (51.21%), Postives = 140/207 (67.63%), Query Frame = 0


Query: 53  WLPGLDPPPHLDGTLAGDFGFDPLGLGEDPHSLKWYVQAELVHCRFAMLGVSGILLTDLL 112
           WLPGL  P +L G+L GD GFDPLGL EDP +L+W+VQAELV+ R+AMLGV+G+LL ++ 
Sbjct: 56  WLPGLASPGYLTGSLPGDNGFDPLGLAEDPENLRWFVQAELVNGRWAMLGVAGMLLPEVF 115

Query: 113 RVTGISELPVWYNAGAVEYGFANKRTLFIVQLLLMGFVETKRYMDFKSPGSQAQEGTF-- 172
              GI  +P WY AG  EY FA+  TLF+++ +L  +VE +R+ D K+PGS  Q+  F  
Sbjct: 116 TSIGIINVPKWYAAGKEEY-FASSSTLFVIEFILSHYVEIRRWQDIKNPGSVNQDPIFKQ 175

Query: 173 FGLEAAFEGLEPGYPGGPLLNPLGIAKDIKNAHDWKLKEIKNGRLAMVAMLGIFVQAYVT 232
           + L A     E GYPGG + NPL  A  +    + K KEI NGRLAM+A LG  +Q  VT
Sbjct: 176 YSLPAG----EVGYPGG-IFNPLNFAPTL----EAKEKEIANGRLAMLAFLGFIIQHNVT 235

Query: 233 HTGPIDNLVEHLSNPWHKTIIQTLSSS 258
             GP DNL++H+S+PWH TI+QTL  +
Sbjct: 236 GKGPFDNLLQHISDPWHNTIVQTLGGN 252

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BLAST of PI0013879 vs. ExPASy Swiss-Prot
Match: P27521 (Chlorophyll a-b binding protein 4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=LHCA4 PE=1 SV=1)

HSP 1 Score: 207.2 bits (526), Expect = 2.2e-52
Identity = 114/253 (45.06%), Postives = 158/253 (62.45%), Query Frame = 0


Query: 14  HPSSSSYTPLFNPNQFL-----RLRSPSRRTLLIAHAQSE------HRQTWLPGLDPPPH 73
           H S+S + P  +  +FL     RL      T + + A++        +  WLPGL  P +
Sbjct: 7   HASASIFRPCTSKPRFLTGSSGRLNRDLSFTSIGSSAKTSSFKVEAKKGEWLPGLASPDY 66

Query: 74  LDGTLAGDFGFDPLGLGEDPHSLKWYVQAELVHCRFAMLGVSGILLTDLLRVTGISELPV 133
           L G+LAGD GFDPLGL EDP +LKW+VQAELV+ R+AMLGV+G+LL ++    GI  +P 
Sbjct: 67  LTGSLAGDNGFDPLGLAEDPENLKWFVQAELVNGRWAMLGVAGMLLPEVFTKIGIINVPE 126

Query: 134 WYNAGAVEYGFANKRTLFIVQLLLMGFVETKRYMDFKSPGSQAQEGTFFGLEAAFEGLEP 193
           WY+AG  +Y FA+  TLF+++ +L  +VE +R+ D K+PGS  Q+  F   + +    E 
Sbjct: 127 WYDAGKEQY-FASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIF--KQYSLPKGEV 186

Query: 194 GYPGGPLLNPLGIAKDIKNAHDWKLKEIKNGRLAMVAMLGIFVQAYVTHTGPIDNLVEHL 253
           GYPGG + NPL  A       + K KE+ NGRLAM+A LG  VQ  VT  GP +NL++HL
Sbjct: 187 GYPGG-IFNPLNFAP----TQEAKEKELANGRLAMLAFLGFVVQHNVTGKGPFENLLQHL 246

Query: 254 SNPWHKTIIQTLS 256
           S+PWH TI+QT +
Sbjct: 247 SDPWHNTIVQTFN 251

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BLAST of PI0013879 vs. ExPASy Swiss-Prot
Match: Q9SYW8 (Photosystem I chlorophyll a/b-binding protein 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=LHCA2 PE=1 SV=1)

HSP 1 Score: 203.0 bits (515), Expect = 4.1e-51
Identity = 104/209 (49.76%), Postives = 129/209 (61.72%), Query Frame = 0


Query: 43  AHAQSEHRQTWLPGLDPPPHLDGTLAGDFGFDPLGLGEDPHSLKWYVQAELVHCRFAMLG 102
           A A    R  W PG  PP  LDG+L GDFGFDPLGL  DP SLKW VQAE+VHCR+AMLG
Sbjct: 45  AVAADPDRPIWFPGSTPPEWLDGSLPGDFGFDPLGLSSDPDSLKWNVQAEIVHCRWAMLG 104

Query: 103 VSGILLTDLLRVTGISELPVWYNAGAVEYGFANKRTLFIVQLLLMGFVETKRYMDFKSPG 162
            +GI + + L   GI   P WY AG  EY F +K TLF+V+L+L+G+ E +R+ D   PG
Sbjct: 105 AAGIFIPEFLTKIGILNTPSWYTAGEQEY-FTDKTTLFVVELILIGWAEGRRWADIIKPG 164

Query: 163 SQAQEGTFFGLEAAFEGLEPGYPGGPLLNPLGIAK-DIKNAHDWKLKEIKNGRLAMVAML 222
           S   +  F        G + GYPGG   +PLG          + + KEIKNGRLAM+A++
Sbjct: 165 SVNTDPVF--PNNKLTGTDVGYPGGLWFDPLGWGSGSPAKLKELRTKEIKNGRLAMLAVM 224

Query: 223 GIFVQAYVTHTGPIDNLVEHLSNPWHKTI 251
           G + Q   T TGPIDNL  HL++P H TI
Sbjct: 225 GAWFQHIYTGTGPIDNLFAHLADPGHATI 250

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BLAST of PI0013879 vs. ExPASy Swiss-Prot
Match: P10708 (Chlorophyll a-b binding protein 7, chloroplastic OS=Solanum lycopersicum OX=4081 GN=CAB7 PE=3 SV=1)

HSP 1 Score: 202.6 bits (514), Expect = 5.4e-51
Identity = 105/221 (47.51%), Postives = 131/221 (59.28%), Query Frame = 0


Query: 36  SRRTLLIAHAQSEHRQTWLPGLDPPPHLDGTLAGDFGFDPLGLGEDPHSLKWYVQAELVH 95
           +R    +  A    R  W PG  PPP LDG+L GDFGFDPLGL  DP SL+W  QAELVH
Sbjct: 51  ARSATTVCVAADPDRPLWFPGSTPPPWLDGSLPGDFGFDPLGLASDPESLRWNQQAELVH 110

Query: 96  CRFAMLGVSGILLTDLLRVTGISELPVWYNAGAVEYGFANKRTLFIVQLLLMGFVETKRY 155
           CR+AMLG +GI + +LL   GI   P WY AG  EY F +  TLFIV+L+L+G+ E +R+
Sbjct: 111 CRWAMLGAAGIFIPELLTKIGILNTPSWYTAGEQEY-FTDTTTLFIVELVLIGWAEGRRW 170

Query: 156 MDFKSPGSQAQEGTFFGLEAAFEGLEPGYPGGPLLNPLGIAK-DIKNAHDWKLKEIKNGR 215
            D   PG    +  F        G + GYPGG   +PLG          + + KEIKNGR
Sbjct: 171 ADIIKPGCVNTDPIF--PNNKLTGTDVGYPGGLWFDPLGWGSGSPAKIKELRTKEIKNGR 230

Query: 216 LAMVAMLGIFVQAYVTHTGPIDNLVEHLSNPWHKTIIQTLS 256
           LAM+A++G + Q   T TGPIDNL  HL++P H TI    S
Sbjct: 231 LAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATIFAAFS 268

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BLAST of PI0013879 vs. ExPASy TrEMBL
Match: A0A0A0LRB4 (Chlorophyll a-b binding protein, chloroplastic OS=Cucumis sativus OX=3659 GN=Csa_2G357290 PE=3 SV=1)

HSP 1 Score: 525.4 bits (1352), Expect = 1.3e-145
Identity = 253/259 (97.68%), Postives = 256/259 (98.84%), Query Frame = 0


Query: 1   MAVSISAATAFHLHPSSSSYTPLFNPNQFLRLRSPSRRTLLIAHAQSEHRQTWLPGLDPP 60
           MAVS SAATA HLHPSSSSYTPLFNP+QFLRLRSPSRRTLLIAHAQSEHRQTWLPGLDPP
Sbjct: 1   MAVSFSAATALHLHPSSSSYTPLFNPSQFLRLRSPSRRTLLIAHAQSEHRQTWLPGLDPP 60

Query: 61  PHLDGTLAGDFGFDPLGLGEDPHSLKWYVQAELVHCRFAMLGVSGILLTDLLRVTGISEL 120
           PHLDGTLAGDFGFDPLGLGEDP SLKWYVQAELVHCRFAMLGVSG+LLTDLLRVTGISEL
Sbjct: 61  PHLDGTLAGDFGFDPLGLGEDPQSLKWYVQAELVHCRFAMLGVSGVLLTDLLRVTGISEL 120

Query: 121 PVWYNAGAVEYGFANKRTLFIVQLLLMGFVETKRYMDFKSPGSQAQEGTFFGLEAAFEGL 180
           PVWYNAGAVEYGFANKRTLFIVQLLLMGFVETKRYMDFKSPGSQAQEGTFFGLEAAF+GL
Sbjct: 121 PVWYNAGAVEYGFANKRTLFIVQLLLMGFVETKRYMDFKSPGSQAQEGTFFGLEAAFKGL 180

Query: 181 EPGYPGGPLLNPLGIAKDIKNAHDWKLKEIKNGRLAMVAMLGIFVQAYVTHTGPIDNLVE 240
           EPGYPGGPLLNPLGIAKDIKNAHDWKLKEIKNGRLAMVAMLGIFVQAYVTHTGPIDNLVE
Sbjct: 181 EPGYPGGPLLNPLGIAKDIKNAHDWKLKEIKNGRLAMVAMLGIFVQAYVTHTGPIDNLVE 240

Query: 241 HLSNPWHKTIIQTLSSSSP 260
           HLSNPWHKTIIQTLSSSSP
Sbjct: 241 HLSNPWHKTIIQTLSSSSP 259

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BLAST of PI0013879 vs. ExPASy TrEMBL
Match: A0A5A7UY53 (Chlorophyll a-b binding protein, chloroplastic OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold501G00360 PE=3 SV=1)

HSP 1 Score: 513.1 bits (1320), Expect = 6.9e-142
Identity = 248/260 (95.38%), Postives = 255/260 (98.08%), Query Frame = 0


Query: 1   MAVSISAATAFHLHPSSSSYTPLFNP-NQFLRLRSPSRRTLLIAHAQSEHRQTWLPGLDP 60
           MAVSISAAT FHLHPSSSS+TPLFNP NQF+RLRSPSR +LLIAHAQSEHRQTWLPGLDP
Sbjct: 1   MAVSISAATPFHLHPSSSSHTPLFNPTNQFVRLRSPSRPSLLIAHAQSEHRQTWLPGLDP 60

Query: 61  PPHLDGTLAGDFGFDPLGLGEDPHSLKWYVQAELVHCRFAMLGVSGILLTDLLRVTGISE 120
           PP+LDGTL GDFGFDPLGLGEDP SLKWYVQAELVHCRFAMLGV+G+LLTDLLRVTGISE
Sbjct: 61  PPYLDGTLVGDFGFDPLGLGEDPDSLKWYVQAELVHCRFAMLGVAGVLLTDLLRVTGISE 120

Query: 121 LPVWYNAGAVEYGFANKRTLFIVQLLLMGFVETKRYMDFKSPGSQAQEGTFFGLEAAFEG 180
           LPVWYNAGAVEYGFANKRTLFIVQLLLMGFVETKRYMDFKSPGSQAQEGTFFGLEAAFEG
Sbjct: 121 LPVWYNAGAVEYGFANKRTLFIVQLLLMGFVETKRYMDFKSPGSQAQEGTFFGLEAAFEG 180

Query: 181 LEPGYPGGPLLNPLGIAKDIKNAHDWKLKEIKNGRLAMVAMLGIFVQAYVTHTGPIDNLV 240
           LEPGYPGGPLLNPLGIAKD+KNAHDWKLKEIKNGRLAMVAMLGIFVQAYVTHTGPIDNLV
Sbjct: 181 LEPGYPGGPLLNPLGIAKDVKNAHDWKLKEIKNGRLAMVAMLGIFVQAYVTHTGPIDNLV 240

Query: 241 EHLSNPWHKTIIQTLSSSSP 260
           EHLSNPWHKTIIQTLSSSSP
Sbjct: 241 EHLSNPWHKTIIQTLSSSSP 260

[Close]

BLAST of PI0013879 vs. ExPASy TrEMBL
Match: A0A1S3BBL1 (Chlorophyll a-b binding protein, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103487892 PE=3 SV=1)

HSP 1 Score: 513.1 bits (1320), Expect = 6.9e-142
Identity = 248/260 (95.38%), Postives = 255/260 (98.08%), Query Frame = 0


Query: 1   MAVSISAATAFHLHPSSSSYTPLFNP-NQFLRLRSPSRRTLLIAHAQSEHRQTWLPGLDP 60
           MAVSISAAT FHLHPSSSS+TPLFNP NQF+RLRSPSR +LLIAHAQSEHRQTWLPGLDP
Sbjct: 1   MAVSISAATPFHLHPSSSSHTPLFNPTNQFVRLRSPSRPSLLIAHAQSEHRQTWLPGLDP 60

Query: 61  PPHLDGTLAGDFGFDPLGLGEDPHSLKWYVQAELVHCRFAMLGVSGILLTDLLRVTGISE 120
           PP+LDGTL GDFGFDPLGLGEDP SLKWYVQAELVHCRFAMLGV+G+LLTDLLRVTGISE
Sbjct: 61  PPYLDGTLVGDFGFDPLGLGEDPDSLKWYVQAELVHCRFAMLGVAGVLLTDLLRVTGISE 120

Query: 121 LPVWYNAGAVEYGFANKRTLFIVQLLLMGFVETKRYMDFKSPGSQAQEGTFFGLEAAFEG 180
           LPVWYNAGAVEYGFANKRTLFIVQLLLMGFVETKRYMDFKSPGSQAQEGTFFGLEAAFEG
Sbjct: 121 LPVWYNAGAVEYGFANKRTLFIVQLLLMGFVETKRYMDFKSPGSQAQEGTFFGLEAAFEG 180

Query: 181 LEPGYPGGPLLNPLGIAKDIKNAHDWKLKEIKNGRLAMVAMLGIFVQAYVTHTGPIDNLV 240
           LEPGYPGGPLLNPLGIAKD+KNAHDWKLKEIKNGRLAMVAMLGIFVQAYVTHTGPIDNLV
Sbjct: 181 LEPGYPGGPLLNPLGIAKDVKNAHDWKLKEIKNGRLAMVAMLGIFVQAYVTHTGPIDNLV 240

Query: 241 EHLSNPWHKTIIQTLSSSSP 260
           EHLSNPWHKTIIQTLSSSSP
Sbjct: 241 EHLSNPWHKTIIQTLSSSSP 260

[Close]

BLAST of PI0013879 vs. ExPASy TrEMBL
Match: A0A6J1KNS0 (Chlorophyll a-b binding protein, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111495909 PE=3 SV=1)

HSP 1 Score: 464.9 bits (1195), Expect = 2.2e-127
Identity = 230/260 (88.46%), Postives = 240/260 (92.31%), Query Frame = 0


Query: 1   MAVSISAATAFHLHPSSSSYTPLFNPNQFLRLRSPSRRTLLI-AHAQSEHRQTWLPGLDP 60
           MAVS+SAAT FHL PSSS Y+   +  Q L LRSPSRRT+   A +QS+ RQTWLPGLDP
Sbjct: 1   MAVSLSAATPFHLLPSSSLYSSSLSSKQHL-LRSPSRRTVTAQAQSQSQPRQTWLPGLDP 60

Query: 61  PPHLDGTLAGDFGFDPLGLGEDPHSLKWYVQAELVHCRFAMLGVSGILLTDLLRVTGISE 120
           PPHLDGTLAGDFGFDPLGLGEDPHSLKW+VQAELVH RFAMLGVSGILLTDLLRVTGISE
Sbjct: 61  PPHLDGTLAGDFGFDPLGLGEDPHSLKWFVQAELVHSRFAMLGVSGILLTDLLRVTGISE 120

Query: 121 LPVWYNAGAVEYGFANKRTLFIVQLLLMGFVETKRYMDFKSPGSQAQEGTFFGLEAAFEG 180
           LPVWYNAGAVEYGFANK TLFIVQLLLMGFVETKRYMDFKSPGSQAQEGTFFGLE+AFEG
Sbjct: 121 LPVWYNAGAVEYGFANKETLFIVQLLLMGFVETKRYMDFKSPGSQAQEGTFFGLESAFEG 180

Query: 181 LEPGYPGGPLLNPLGIAKDIKNAHDWKLKEIKNGRLAMVAMLGIFVQAYVTHTGPIDNLV 240
           LEPGYPGGPLLNPLG+AKDIKNAH+WKLKEIKNGRLAMVAMLGIFVQAYVT TGPIDNLV
Sbjct: 181 LEPGYPGGPLLNPLGLAKDIKNAHEWKLKEIKNGRLAMVAMLGIFVQAYVTQTGPIDNLV 240

Query: 241 EHLSNPWHKTIIQTLSSSSP 260
           EHLSNPWH TII TLSSSSP
Sbjct: 241 EHLSNPWHNTIIHTLSSSSP 259

[Close]

BLAST of PI0013879 vs. ExPASy TrEMBL
Match: A0A6J1GH16 (Chlorophyll a-b binding protein, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111454144 PE=3 SV=1)

HSP 1 Score: 464.2 bits (1193), Expect = 3.7e-127
Identity = 228/257 (88.72%), Postives = 239/257 (93.00%), Query Frame = 0


Query: 1   MAVSISAATAFHLHPSSSSYTPLFNPNQFLRLRSPSRRTLLI-AHAQSEHRQTWLPGLDP 60
           MAVS+SAAT+FHL PSSS Y+   +P Q L LRSPSRRT+   A +QS+ RQTWLPGLDP
Sbjct: 1   MAVSLSAATSFHLLPSSSFYSSSLSPKQHL-LRSPSRRTVTAQAQSQSQPRQTWLPGLDP 60

Query: 61  PPHLDGTLAGDFGFDPLGLGEDPHSLKWYVQAELVHCRFAMLGVSGILLTDLLRVTGISE 120
           PPHLDGTLAGDFGFDPLGLGEDPHSLKW+VQAELVH RFAMLGVSGILLTDLLRVTGISE
Sbjct: 61  PPHLDGTLAGDFGFDPLGLGEDPHSLKWFVQAELVHSRFAMLGVSGILLTDLLRVTGISE 120

Query: 121 LPVWYNAGAVEYGFANKRTLFIVQLLLMGFVETKRYMDFKSPGSQAQEGTFFGLEAAFEG 180
           LPVWYNAGAVEYGFANK TLFIVQLLLMGFVETKRYMDFKSPGSQAQEGTFFGLE+AFEG
Sbjct: 121 LPVWYNAGAVEYGFANKETLFIVQLLLMGFVETKRYMDFKSPGSQAQEGTFFGLESAFEG 180

Query: 181 LEPGYPGGPLLNPLGIAKDIKNAHDWKLKEIKNGRLAMVAMLGIFVQAYVTHTGPIDNLV 240
           LEPGYPGGPLLNPLG+AKDIKNAHDWKLKEIKNGRLAMVAMLGIFVQAYVT TGPIDNLV
Sbjct: 181 LEPGYPGGPLLNPLGLAKDIKNAHDWKLKEIKNGRLAMVAMLGIFVQAYVTQTGPIDNLV 240

Query: 241 EHLSNPWHKTIIQTLSS 257
           EHLSNPWH T+I TLSS
Sbjct: 241 EHLSNPWHNTVIHTLSS 256

[Close]

BLAST of PI0013879 vs. NCBI nr
Match: XP_004150882.1 (photosystem I chlorophyll a/b-binding protein 5, chloroplastic [Cucumis sativus] >KGN62506.1 hypothetical protein Csa_022315 [Cucumis sativus])

HSP 1 Score: 525.4 bits (1352), Expect = 2.8e-145
Identity = 253/259 (97.68%), Postives = 256/259 (98.84%), Query Frame = 0


Query: 1   MAVSISAATAFHLHPSSSSYTPLFNPNQFLRLRSPSRRTLLIAHAQSEHRQTWLPGLDPP 60
           MAVS SAATA HLHPSSSSYTPLFNP+QFLRLRSPSRRTLLIAHAQSEHRQTWLPGLDPP
Sbjct: 1   MAVSFSAATALHLHPSSSSYTPLFNPSQFLRLRSPSRRTLLIAHAQSEHRQTWLPGLDPP 60

Query: 61  PHLDGTLAGDFGFDPLGLGEDPHSLKWYVQAELVHCRFAMLGVSGILLTDLLRVTGISEL 120
           PHLDGTLAGDFGFDPLGLGEDP SLKWYVQAELVHCRFAMLGVSG+LLTDLLRVTGISEL
Sbjct: 61  PHLDGTLAGDFGFDPLGLGEDPQSLKWYVQAELVHCRFAMLGVSGVLLTDLLRVTGISEL 120

Query: 121 PVWYNAGAVEYGFANKRTLFIVQLLLMGFVETKRYMDFKSPGSQAQEGTFFGLEAAFEGL 180
           PVWYNAGAVEYGFANKRTLFIVQLLLMGFVETKRYMDFKSPGSQAQEGTFFGLEAAF+GL
Sbjct: 121 PVWYNAGAVEYGFANKRTLFIVQLLLMGFVETKRYMDFKSPGSQAQEGTFFGLEAAFKGL 180

Query: 181 EPGYPGGPLLNPLGIAKDIKNAHDWKLKEIKNGRLAMVAMLGIFVQAYVTHTGPIDNLVE 240
           EPGYPGGPLLNPLGIAKDIKNAHDWKLKEIKNGRLAMVAMLGIFVQAYVTHTGPIDNLVE
Sbjct: 181 EPGYPGGPLLNPLGIAKDIKNAHDWKLKEIKNGRLAMVAMLGIFVQAYVTHTGPIDNLVE 240

Query: 241 HLSNPWHKTIIQTLSSSSP 260
           HLSNPWHKTIIQTLSSSSP
Sbjct: 241 HLSNPWHKTIIQTLSSSSP 259

[Close]

BLAST of PI0013879 vs. NCBI nr
Match: XP_008444623.1 (PREDICTED: photosystem I chlorophyll a/b-binding protein 5, chloroplastic [Cucumis melo] >KAA0060903.1 photosystem I chlorophyll a/b-binding protein 5 [Cucumis melo var. makuwa])

HSP 1 Score: 513.1 bits (1320), Expect = 1.4e-141
Identity = 248/260 (95.38%), Postives = 255/260 (98.08%), Query Frame = 0


Query: 1   MAVSISAATAFHLHPSSSSYTPLFNP-NQFLRLRSPSRRTLLIAHAQSEHRQTWLPGLDP 60
           MAVSISAAT FHLHPSSSS+TPLFNP NQF+RLRSPSR +LLIAHAQSEHRQTWLPGLDP
Sbjct: 1   MAVSISAATPFHLHPSSSSHTPLFNPTNQFVRLRSPSRPSLLIAHAQSEHRQTWLPGLDP 60

Query: 61  PPHLDGTLAGDFGFDPLGLGEDPHSLKWYVQAELVHCRFAMLGVSGILLTDLLRVTGISE 120
           PP+LDGTL GDFGFDPLGLGEDP SLKWYVQAELVHCRFAMLGV+G+LLTDLLRVTGISE
Sbjct: 61  PPYLDGTLVGDFGFDPLGLGEDPDSLKWYVQAELVHCRFAMLGVAGVLLTDLLRVTGISE 120

Query: 121 LPVWYNAGAVEYGFANKRTLFIVQLLLMGFVETKRYMDFKSPGSQAQEGTFFGLEAAFEG 180
           LPVWYNAGAVEYGFANKRTLFIVQLLLMGFVETKRYMDFKSPGSQAQEGTFFGLEAAFEG
Sbjct: 121 LPVWYNAGAVEYGFANKRTLFIVQLLLMGFVETKRYMDFKSPGSQAQEGTFFGLEAAFEG 180

Query: 181 LEPGYPGGPLLNPLGIAKDIKNAHDWKLKEIKNGRLAMVAMLGIFVQAYVTHTGPIDNLV 240
           LEPGYPGGPLLNPLGIAKD+KNAHDWKLKEIKNGRLAMVAMLGIFVQAYVTHTGPIDNLV
Sbjct: 181 LEPGYPGGPLLNPLGIAKDVKNAHDWKLKEIKNGRLAMVAMLGIFVQAYVTHTGPIDNLV 240

Query: 241 EHLSNPWHKTIIQTLSSSSP 260
           EHLSNPWHKTIIQTLSSSSP
Sbjct: 241 EHLSNPWHKTIIQTLSSSSP 260

[Close]

BLAST of PI0013879 vs. NCBI nr
Match: XP_038886221.1 (photosystem I chlorophyll a/b-binding protein 5, chloroplastic [Benincasa hispida])

HSP 1 Score: 500.7 bits (1288), Expect = 7.3e-138
Identity = 248/262 (94.66%), Postives = 250/262 (95.42%), Query Frame = 0


Query: 1   MAVSISA----ATAFHLHP--SSSSYTPLFNPNQFLRLRSPSRRTLLIAHAQSEHRQTWL 60
           MAVS+SA    ATAFHL P  SSSSYTP FNPNQ LRLRSPSRRTLLIA AQSEHRQTWL
Sbjct: 1   MAVSVSAATARATAFHLQPSSSSSSYTPSFNPNQSLRLRSPSRRTLLIAQAQSEHRQTWL 60

Query: 61  PGLDPPPHLDGTLAGDFGFDPLGLGEDPHSLKWYVQAELVHCRFAMLGVSGILLTDLLRV 120
           PGLDPPPHLDGTLAGDFGFDPLGLGEDPHSLKWYVQAELVH RFAMLGVSGILLTDLLRV
Sbjct: 61  PGLDPPPHLDGTLAGDFGFDPLGLGEDPHSLKWYVQAELVHSRFAMLGVSGILLTDLLRV 120

Query: 121 TGISELPVWYNAGAVEYGFANKRTLFIVQLLLMGFVETKRYMDFKSPGSQAQEGTFFGLE 180
           TGISELPVWYNAGAVEYGFANK TLFIVQLLLMGFVETKRYMDFKSPGSQAQEGTFFGLE
Sbjct: 121 TGISELPVWYNAGAVEYGFANKETLFIVQLLLMGFVETKRYMDFKSPGSQAQEGTFFGLE 180

Query: 181 AAFEGLEPGYPGGPLLNPLGIAKDIKNAHDWKLKEIKNGRLAMVAMLGIFVQAYVTHTGP 240
           AAFEGLEPGYPGGPLLNPLGIAKDIKNAH+WKLKEIKNGRLAMVAMLGIFVQAYVTHTGP
Sbjct: 181 AAFEGLEPGYPGGPLLNPLGIAKDIKNAHEWKLKEIKNGRLAMVAMLGIFVQAYVTHTGP 240

Query: 241 IDNLVEHLSNPWHKTIIQTLSS 257
           IDNLVEHLSNPWHKTIIQTLSS
Sbjct: 241 IDNLVEHLSNPWHKTIIQTLSS 262

[Close]

BLAST of PI0013879 vs. NCBI nr
Match: XP_023001834.1 (photosystem I chlorophyll a/b-binding protein 5, chloroplastic [Cucurbita maxima])

HSP 1 Score: 464.9 bits (1195), Expect = 4.5e-127
Identity = 230/260 (88.46%), Postives = 240/260 (92.31%), Query Frame = 0


Query: 1   MAVSISAATAFHLHPSSSSYTPLFNPNQFLRLRSPSRRTLLI-AHAQSEHRQTWLPGLDP 60
           MAVS+SAAT FHL PSSS Y+   +  Q L LRSPSRRT+   A +QS+ RQTWLPGLDP
Sbjct: 1   MAVSLSAATPFHLLPSSSLYSSSLSSKQHL-LRSPSRRTVTAQAQSQSQPRQTWLPGLDP 60

Query: 61  PPHLDGTLAGDFGFDPLGLGEDPHSLKWYVQAELVHCRFAMLGVSGILLTDLLRVTGISE 120
           PPHLDGTLAGDFGFDPLGLGEDPHSLKW+VQAELVH RFAMLGVSGILLTDLLRVTGISE
Sbjct: 61  PPHLDGTLAGDFGFDPLGLGEDPHSLKWFVQAELVHSRFAMLGVSGILLTDLLRVTGISE 120

Query: 121 LPVWYNAGAVEYGFANKRTLFIVQLLLMGFVETKRYMDFKSPGSQAQEGTFFGLEAAFEG 180
           LPVWYNAGAVEYGFANK TLFIVQLLLMGFVETKRYMDFKSPGSQAQEGTFFGLE+AFEG
Sbjct: 121 LPVWYNAGAVEYGFANKETLFIVQLLLMGFVETKRYMDFKSPGSQAQEGTFFGLESAFEG 180

Query: 181 LEPGYPGGPLLNPLGIAKDIKNAHDWKLKEIKNGRLAMVAMLGIFVQAYVTHTGPIDNLV 240
           LEPGYPGGPLLNPLG+AKDIKNAH+WKLKEIKNGRLAMVAMLGIFVQAYVT TGPIDNLV
Sbjct: 181 LEPGYPGGPLLNPLGLAKDIKNAHEWKLKEIKNGRLAMVAMLGIFVQAYVTQTGPIDNLV 240

Query: 241 EHLSNPWHKTIIQTLSSSSP 260
           EHLSNPWH TII TLSSSSP
Sbjct: 241 EHLSNPWHNTIIHTLSSSSP 259

[Close]

BLAST of PI0013879 vs. NCBI nr
Match: XP_022951251.1 (photosystem I chlorophyll a/b-binding protein 5, chloroplastic [Cucurbita moschata] >KAG6585667.1 Photosystem I chlorophyll a/b-binding protein 5, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia] >KAG7020573.1 Photosystem I chlorophyll a/b-binding protein 5, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 464.2 bits (1193), Expect = 7.6e-127
Identity = 228/257 (88.72%), Postives = 239/257 (93.00%), Query Frame = 0


Query: 1   MAVSISAATAFHLHPSSSSYTPLFNPNQFLRLRSPSRRTLLI-AHAQSEHRQTWLPGLDP 60
           MAVS+SAAT+FHL PSSS Y+   +P Q L LRSPSRRT+   A +QS+ RQTWLPGLDP
Sbjct: 1   MAVSLSAATSFHLLPSSSFYSSSLSPKQHL-LRSPSRRTVTAQAQSQSQPRQTWLPGLDP 60

Query: 61  PPHLDGTLAGDFGFDPLGLGEDPHSLKWYVQAELVHCRFAMLGVSGILLTDLLRVTGISE 120
           PPHLDGTLAGDFGFDPLGLGEDPHSLKW+VQAELVH RFAMLGVSGILLTDLLRVTGISE
Sbjct: 61  PPHLDGTLAGDFGFDPLGLGEDPHSLKWFVQAELVHSRFAMLGVSGILLTDLLRVTGISE 120

Query: 121 LPVWYNAGAVEYGFANKRTLFIVQLLLMGFVETKRYMDFKSPGSQAQEGTFFGLEAAFEG 180
           LPVWYNAGAVEYGFANK TLFIVQLLLMGFVETKRYMDFKSPGSQAQEGTFFGLE+AFEG
Sbjct: 121 LPVWYNAGAVEYGFANKETLFIVQLLLMGFVETKRYMDFKSPGSQAQEGTFFGLESAFEG 180

Query: 181 LEPGYPGGPLLNPLGIAKDIKNAHDWKLKEIKNGRLAMVAMLGIFVQAYVTHTGPIDNLV 240
           LEPGYPGGPLLNPLG+AKDIKNAHDWKLKEIKNGRLAMVAMLGIFVQAYVT TGPIDNLV
Sbjct: 181 LEPGYPGGPLLNPLGLAKDIKNAHDWKLKEIKNGRLAMVAMLGIFVQAYVTQTGPIDNLV 240

Query: 241 EHLSNPWHKTIIQTLSS 257
           EHLSNPWH T+I TLSS
Sbjct: 241 EHLSNPWHNTVIHTLSS 256

[Close]

BLAST of PI0013879 vs. TAIR 10
Match: AT1G45474.1 (photosystem I light harvesting complex gene 5 )

HSP 1 Score: 370.5 bits (950), Expect = 1.1e-102
Identity = 173/210 (82.38%), Postives = 190/210 (90.48%), Query Frame = 0


Query: 50  RQTWLPGLDPPPHLDGTLAGDFGFDPLGLGEDPHSLKWYVQAELVHCRFAMLGVSGILLT 109
           R TWLPGL+PPP+LDG LAGD+GFDPLGLGEDP SLKWYVQAELVH RFAMLGV+GIL T
Sbjct: 46  RATWLPGLNPPPYLDGNLAGDYGFDPLGLGEDPESLKWYVQAELVHSRFAMLGVAGILFT 105

Query: 110 DLLRVTGISELPVWYNAGAVEYGFANKRTLFIVQLLLMGFVETKRYMDFKSPGSQAQEGT 169
           DLLR TGI  LPVWY AGAV++ FA+ +TL +VQ LLMGF ETKRYMDF SPGSQA+EG+
Sbjct: 106 DLLRTTGIRNLPVWYEAGAVKFDFASTKTLIVVQFLLMGFAETKRYMDFVSPGSQAKEGS 165

Query: 170 -FFGLEAAFEGLEPGYPGGPLLNPLGIAKDIKNAHDWKLKEIKNGRLAMVAMLGIFVQAY 229
            FFGLEAA EGLEPGYPGGPLLNPLG+AKD++NAHDWKLKEIKNGRLAM+AMLG FVQA 
Sbjct: 166 FFFGLEAALEGLEPGYPGGPLLNPLGLAKDVQNAHDWKLKEIKNGRLAMMAMLGFFVQAS 225

Query: 230 VTHTGPIDNLVEHLSNPWHKTIIQTLSSSS 259
           VTHTGPIDNLVEHLSNPWHKTIIQTL +S+
Sbjct: 226 VTHTGPIDNLVEHLSNPWHKTIIQTLFTST 255

[Close]

BLAST of PI0013879 vs. TAIR 10
Match: AT1G45474.2 (photosystem I light harvesting complex gene 5 )

HSP 1 Score: 370.5 bits (950), Expect = 1.1e-102
Identity = 173/210 (82.38%), Postives = 190/210 (90.48%), Query Frame = 0


Query: 50  RQTWLPGLDPPPHLDGTLAGDFGFDPLGLGEDPHSLKWYVQAELVHCRFAMLGVSGILLT 109
           R TWLPGL+PPP+LDG LAGD+GFDPLGLGEDP SLKWYVQAELVH RFAMLGV+GIL T
Sbjct: 46  RATWLPGLNPPPYLDGNLAGDYGFDPLGLGEDPESLKWYVQAELVHSRFAMLGVAGILFT 105

Query: 110 DLLRVTGISELPVWYNAGAVEYGFANKRTLFIVQLLLMGFVETKRYMDFKSPGSQAQEGT 169
           DLLR TGI  LPVWY AGAV++ FA+ +TL +VQ LLMGF ETKRYMDF SPGSQA+EG+
Sbjct: 106 DLLRTTGIRNLPVWYEAGAVKFDFASTKTLIVVQFLLMGFAETKRYMDFVSPGSQAKEGS 165

Query: 170 -FFGLEAAFEGLEPGYPGGPLLNPLGIAKDIKNAHDWKLKEIKNGRLAMVAMLGIFVQAY 229
            FFGLEAA EGLEPGYPGGPLLNPLG+AKD++NAHDWKLKEIKNGRLAM+AMLG FVQA 
Sbjct: 166 FFFGLEAALEGLEPGYPGGPLLNPLGLAKDVQNAHDWKLKEIKNGRLAMMAMLGFFVQAS 225

Query: 230 VTHTGPIDNLVEHLSNPWHKTIIQTLSSSS 259
           VTHTGPIDNLVEHLSNPWHKTIIQTL +S+
Sbjct: 226 VTHTGPIDNLVEHLSNPWHKTIIQTLFTST 255

[Close]

BLAST of PI0013879 vs. TAIR 10
Match: AT3G47470.1 (light-harvesting chlorophyll-protein complex I subunit A4 )

HSP 1 Score: 207.2 bits (526), Expect = 1.6e-53
Identity = 114/253 (45.06%), Postives = 158/253 (62.45%), Query Frame = 0


Query: 14  HPSSSSYTPLFNPNQFL-----RLRSPSRRTLLIAHAQSE------HRQTWLPGLDPPPH 73
           H S+S + P  +  +FL     RL      T + + A++        +  WLPGL  P +
Sbjct: 7   HASASIFRPCTSKPRFLTGSSGRLNRDLSFTSIGSSAKTSSFKVEAKKGEWLPGLASPDY 66

Query: 74  LDGTLAGDFGFDPLGLGEDPHSLKWYVQAELVHCRFAMLGVSGILLTDLLRVTGISELPV 133
           L G+LAGD GFDPLGL EDP +LKW+VQAELV+ R+AMLGV+G+LL ++    GI  +P 
Sbjct: 67  LTGSLAGDNGFDPLGLAEDPENLKWFVQAELVNGRWAMLGVAGMLLPEVFTKIGIINVPE 126

Query: 134 WYNAGAVEYGFANKRTLFIVQLLLMGFVETKRYMDFKSPGSQAQEGTFFGLEAAFEGLEP 193
           WY+AG  +Y FA+  TLF+++ +L  +VE +R+ D K+PGS  Q+  F   + +    E 
Sbjct: 127 WYDAGKEQY-FASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIF--KQYSLPKGEV 186

Query: 194 GYPGGPLLNPLGIAKDIKNAHDWKLKEIKNGRLAMVAMLGIFVQAYVTHTGPIDNLVEHL 253
           GYPGG + NPL  A       + K KE+ NGRLAM+A LG  VQ  VT  GP +NL++HL
Sbjct: 187 GYPGG-IFNPLNFAP----TQEAKEKELANGRLAMLAFLGFVVQHNVTGKGPFENLLQHL 246

Query: 254 SNPWHKTIIQTLS 256
           S+PWH TI+QT +
Sbjct: 247 SDPWHNTIVQTFN 251

[Close]

BLAST of PI0013879 vs. TAIR 10
Match: AT3G61470.1 (photosystem I light harvesting complex gene 2 )

HSP 1 Score: 203.0 bits (515), Expect = 2.9e-52
Identity = 104/209 (49.76%), Postives = 129/209 (61.72%), Query Frame = 0


Query: 43  AHAQSEHRQTWLPGLDPPPHLDGTLAGDFGFDPLGLGEDPHSLKWYVQAELVHCRFAMLG 102
           A A    R  W PG  PP  LDG+L GDFGFDPLGL  DP SLKW VQAE+VHCR+AMLG
Sbjct: 45  AVAADPDRPIWFPGSTPPEWLDGSLPGDFGFDPLGLSSDPDSLKWNVQAEIVHCRWAMLG 104

Query: 103 VSGILLTDLLRVTGISELPVWYNAGAVEYGFANKRTLFIVQLLLMGFVETKRYMDFKSPG 162
            +GI + + L   GI   P WY AG  EY F +K TLF+V+L+L+G+ E +R+ D   PG
Sbjct: 105 AAGIFIPEFLTKIGILNTPSWYTAGEQEY-FTDKTTLFVVELILIGWAEGRRWADIIKPG 164

Query: 163 SQAQEGTFFGLEAAFEGLEPGYPGGPLLNPLGIAK-DIKNAHDWKLKEIKNGRLAMVAML 222
           S   +  F        G + GYPGG   +PLG          + + KEIKNGRLAM+A++
Sbjct: 165 SVNTDPVF--PNNKLTGTDVGYPGGLWFDPLGWGSGSPAKLKELRTKEIKNGRLAMLAVM 224

Query: 223 GIFVQAYVTHTGPIDNLVEHLSNPWHKTI 251
           G + Q   T TGPIDNL  HL++P H TI
Sbjct: 225 GAWFQHIYTGTGPIDNLFAHLADPGHATI 250

[Close]

BLAST of PI0013879 vs. TAIR 10
Match: AT1G19150.1 (photosystem I light harvesting complex gene 6 )

HSP 1 Score: 175.6 bits (444), Expect = 5.0e-44
Identity = 93/208 (44.71%), Postives = 125/208 (60.10%), Query Frame = 0


Query: 50  RQTWLPGLDPPPHLDGTLAGDFGFDPLGLGEDPHSLKWYVQAELVHCRFAMLGVSGILLT 109
           R  W PG  PP  LDG+L GDFGFDPLGLG DP +LKW+ QAEL+H R+AML V+GI++ 
Sbjct: 65  RPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPDTLKWFAQAELIHSRWAMLAVTGIIIP 124

Query: 110 DLLRVTGISELPVWYNAGAVEYGFANKRTLFIVQLLLMGFVETKRYMDFKSPGSQAQEGT 169
           + L   G  E   WY+AG+ EY FA+  TLF+ Q++LMG+ E +R+ D   PGS   E  
Sbjct: 125 ECLERLGFIENFSWYDAGSREY-FADSTTLFVAQMVLMGWAEGRRWADLIKPGSVDIEPK 184

Query: 170 FFGLEAAFEGLEPGYPGGPLLNPLGIAK-DIKNAHDWKLKEIKNGRLAMVAMLGIFVQAY 229
           +          + GYPGG   + +   +   +     + KEIKNGRLAM+A LG   QA 
Sbjct: 185 Y--PHKVNPKPDVGYPGGLWFDFMMWGRGSPEPVMVLRTKEIKNGRLAMLAFLGFCFQAT 244

Query: 230 VTHTGPIDNLVEHLSNPWHKTIIQTLSS 257
            T   PI+NL+ HL++P H  +    +S
Sbjct: 245 YTSQDPIENLMAHLADPGHCNVFSAFTS 269

The following BLAST results are available for this feature:

BLAST of PI0013879 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9C639	1.5e-101	82.38	Photosystem I chlorophyll a/b-binding protein 5, chloroplastic OS=Arabidopsis th...	[more]
Q9SQL2	1.3e-52	51.21	Chlorophyll a-b binding protein P4, chloroplastic OS=Pisum sativum OX=3888 GN=lh...	[more]
P27521	2.2e-52	45.06	Chlorophyll a-b binding protein 4, chloroplastic OS=Arabidopsis thaliana OX=3702...	[more]
Q9SYW8	4.1e-51	49.76	Photosystem I chlorophyll a/b-binding protein 2, chloroplastic OS=Arabidopsis th...	[more]
P10708	5.4e-51	47.51	Chlorophyll a-b binding protein 7, chloroplastic OS=Solanum lycopersicum OX=4081...	[more]

BLAST of PI0013879 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LRB4	1.3e-145	97.68	Chlorophyll a-b binding protein, chloroplastic OS=Cucumis sativus OX=3659 GN=Csa...	[more]
A0A5A7UY53	6.9e-142	95.38	Chlorophyll a-b binding protein, chloroplastic OS=Cucumis melo var. makuwa OX=11...	[more]
A0A1S3BBL1	6.9e-142	95.38	Chlorophyll a-b binding protein, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103...	[more]
A0A6J1KNS0	2.2e-127	88.46	Chlorophyll a-b binding protein, chloroplastic OS=Cucurbita maxima OX=3661 GN=LO...	[more]
A0A6J1GH16	3.7e-127	88.72	Chlorophyll a-b binding protein, chloroplastic OS=Cucurbita moschata OX=3662 GN=...	[more]

BLAST of PI0013879 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004150882.1	2.8e-145	97.68	photosystem I chlorophyll a/b-binding protein 5, chloroplastic [Cucumis sativus]...	[more]
XP_008444623.1	1.4e-141	95.38	PREDICTED: photosystem I chlorophyll a/b-binding protein 5, chloroplastic [Cucum...	[more]
XP_038886221.1	7.3e-138	94.66	photosystem I chlorophyll a/b-binding protein 5, chloroplastic [Benincasa hispid...	[more]
XP_023001834.1	4.5e-127	88.46	photosystem I chlorophyll a/b-binding protein 5, chloroplastic [Cucurbita maxima...	[more]
XP_022951251.1	7.6e-127	88.72	photosystem I chlorophyll a/b-binding protein 5, chloroplastic [Cucurbita moscha...	[more]

BLAST of PI0013879 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G45474.1	1.1e-102	82.38	photosystem I light harvesting complex gene 5	[more]
AT1G45474.2	1.1e-102	82.38	photosystem I light harvesting complex gene 5	[more]
AT3G47470.1	1.6e-53	45.06	light-harvesting chlorophyll-protein complex I subunit A4	[more]
AT3G61470.1	2.9e-52	49.76	photosystem I light harvesting complex gene 2	[more]
AT1G19150.1	5.0e-44	44.71	photosystem I light harvesting complex gene 6	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR023329	Chlorophyll a/b binding domain superfamily	GENE3D	1.10.3460.10	Chlorophyll a/b binding protein domain	coord: 50..258 e-value: 2.3E-61 score: 209.2
IPR022796	Chlorophyll A-B binding protein	PFAM	PF00504	Chloroa_b-bind	coord: 59..228 e-value: 6.3E-48 score: 163.3
None	No IPR available	PANTHER	PTHR21649:SF67	PHOTOSYSTEM I CHLOROPHYLL A/B-BINDING PROTEIN 5, CHLOROPLASTIC	coord: 42..256
None	No IPR available	SUPERFAMILY	103511	Chlorophyll a-b binding protein	coord: 47..256
IPR001344	Chlorophyll A-B binding protein, plant and chromista	PANTHER	PTHR21649	CHLOROPHYLL A/B BINDING PROTEIN	coord: 42..256

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0013879.1	PI0013879.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009768	photosynthesis, light harvesting in photosystem I
biological_process	GO:0018298	protein-chromophore linkage
biological_process	GO:0009416	response to light stimulus
biological_process	GO:0009765	photosynthesis, light harvesting
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0009522	photosystem I
cellular_component	GO:0009523	photosystem II
cellular_component	GO:0016020	membrane
molecular_function	GO:0016168	chlorophyll binding
molecular_function	GO:0046872	metal ion binding