PI0013763 (gene) Melon (PI 482460) v1

Overview


Name	PI0013763
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Unknown protein
Location	chr08: 4267620 .. 4267973 (+)
RNA-Seq Expression	PI0013763
Synteny	PI0013763

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCATACACGATCATTTACATATATCAAAATCAGACTCAAGGGTGATATTCATGATCATGATGATTCTGATCATGACAATATGGACAAGGATGTGGATAAAGATGAGGACAATGAAGATCCTCCAACCCAAACTCAAGAAGAACATATGATCATTGGTGAGAGTAAATCTGTTGAAGGGTCACATCTTGAAGCACCAAAAGAAACATCACCTCCATATAAAGAGAAGTTGGGGGAGGTTGAAGTGGATGGCGATGATGCAGAGTTGCTCTTGAGTATAATTGAAATGGTTGGGAAGTTGGTGTCCAATAGTGAATCTGTAGTTGAAATTGATGGCTACTCACCAAAGGAATAA

mRNA sequence

ATGCATACACGATCATTTACATATATCAAAATCAGACTCAAGGGTGATATTCATGATCATGATGATTCTGATCATGACAATATGGACAAGGATGTGGATAAAGATGAGGACAATGAAGATCCTCCAACCCAAACTCAAGAAGAACATATGATCATTGGTGAGAGTAAATCTGTTGAAGGGTCACATCTTGAAGCACCAAAAGAAACATCACCTCCATATAAAGAGAAGTTGGGGGAGGTTGAAGTGGATGGCGATGATGCAGAGTTGCTCTTGAGTATAATTGAAATGGTTGGGAAGTTGGTGTCCAATAGTGAATCTGTAGTTGAAATTGATGGCTACTCACCAAAGGAATAA

Coding sequence (CDS)

ATGCATACACGATCATTTACATATATCAAAATCAGACTCAAGGGTGATATTCATGATCATGATGATTCTGATCATGACAATATGGACAAGGATGTGGATAAAGATGAGGACAATGAAGATCCTCCAACCCAAACTCAAGAAGAACATATGATCATTGGTGAGAGTAAATCTGTTGAAGGGTCACATCTTGAAGCACCAAAAGAAACATCACCTCCATATAAAGAGAAGTTGGGGGAGGTTGAAGTGGATGGCGATGATGCAGAGTTGCTCTTGAGTATAATTGAAATGGTTGGGAAGTTGGTGTCCAATAGTGAATCTGTAGTTGAAATTGATGGCTACTCACCAAAGGAATAA

Protein sequence

MHTRSFTYIKIRLKGDIHDHDDSDHDNMDKDVDKDEDNEDPPTQTQEEHMIIGESKSVEGSHLEAPKETSPPYKEKLGEVEVDGDDAELLLSIIEMVGKLVSNSESVVEIDGYSPKE

Homology

[Close]

BLAST of PI0013763 vs. ExPASy TrEMBL
Match: A0A5A7TSL7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold243G006310 PE=4 SV=1)

HSP 1 Score: 74.3 bits (181), Expect = 3.7e-10
Identity = 42/64 (65.62%), Postives = 52/64 (81.25%), Query Frame = 0


Query: 26  DNMDKDVDKDEDN---EDPPTQTQEEHMIIGESKSVEGSHLEAPKETSPPYKEKLGEVEV 85
           D ++   DKD+DN   EDPPT+TQEE++IIG+ +SV GS+ EAPKET PP+KE LGEVEV
Sbjct: 53  DALEFGSDKDKDNHMDEDPPTKTQEEYVIIGKGQSVIGSYPEAPKETLPPHKEMLGEVEV 112

Query: 86  DGDD 87
           DGDD
Sbjct: 113 DGDD 116

[Close]

BLAST of PI0013763 vs. NCBI nr
Match: KAA0046054.1 (hypothetical protein E6C27_scaffold243G006310 [Cucumis melo var. makuwa])

HSP 1 Score: 74.3 bits (181), Expect = 7.7e-10
Identity = 42/64 (65.62%), Postives = 52/64 (81.25%), Query Frame = 0


Query: 26  DNMDKDVDKDEDN---EDPPTQTQEEHMIIGESKSVEGSHLEAPKETSPPYKEKLGEVEV 85
           D ++   DKD+DN   EDPPT+TQEE++IIG+ +SV GS+ EAPKET PP+KE LGEVEV
Sbjct: 53  DALEFGSDKDKDNHMDEDPPTKTQEEYVIIGKGQSVIGSYPEAPKETLPPHKEMLGEVEV 112

Query: 86  DGDD 87
           DGDD
Sbjct: 113 DGDD 116

The following BLAST results are available for this feature:

BLAST of PI0013763 vs.


Match Name	E-value	Identity	Description

BLAST of PI0013763 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TSL7	3.7e-10	65.63	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]

BLAST of PI0013763 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0046054.1	7.7e-10	65.63	hypothetical protein E6C27_scaffold243G006310 [Cucumis melo var. makuwa]	[more]

BLAST of PI0013763 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 15..32
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 15..76
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 52..76

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0013763.1	PI0013763.1	mRNA