PI0013647 (gene) Melon (PI 482460) v1

Overview


Name	PI0013647
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	GATA zinc finger domain-containing protein 10-like isoform X2
Location	chr04: 14204701 .. 14205028 (-)
RNA-Seq Expression	PI0013647
Synteny	PI0013647

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATGCCAGCATTTGGAGCAGGATATTGTGATTCTGAGGTCGATACAGGATATTATGACTTAGGGGTCGGTACACCGTTTTCATACATGGATGCCGATCCATCAACTTCTTACATGCATGGACACGGACGCGGCTGCGGAGAACATAACGAATATCTGTACTATGAAGCACCTGCATGTGTATCAGATCCACAAGAGTACCAACAATAACTAGAGAATCAAGAGGAGCCAATGCAACATAGTGTTCAGAGTCGACGACGACAACCAGCTCGAAATCGACGACGTTCGGGTTGTGGAACATATTGATTTTCTTTTATCTTTTAAATGA

mRNA sequence

ATGATGCCAGCATTTGGAGCAGGATATTGTGATTCTGAGGTCGATACAGGATATTATGACTTAGGGGTCGGTACACCGTTTTCATACATGGATGCCGATCCATCAACTTCTTACATGCATGGACACGGACGCGGCTGCGGAGAACATAACGAATATCTGTACTATGAAGCACCTGCATGTAGAATCAAGAGGAGCCAATGCAACATAGTGTTCAGAGTCGACGACGACAACCAGCTCGAAATCGACGACGTTCGGGTTGTGGAACATATTGATTTTCTTTTATCTTTTAAATGA

Coding sequence (CDS)

ATGATGCCAGCATTTGGAGCAGGATATTGTGATTCTGAGGTCGATACAGGATATTATGACTTAGGGGTCGGTACACCGTTTTCATACATGGATGCCGATCCATCAACTTCTTACATGCATGGACACGGACGCGGCTGCGGAGAACATAACGAATATCTGTACTATGAAGCACCTGCATGTAGAATCAAGAGGAGCCAATGCAACATAGTGTTCAGAGTCGACGACGACAACCAGCTCGAAATCGACGACGTTCGGGTTGTGGAACATATTGATTTTCTTTTATCTTTTAAATGA

Protein sequence

MMPAFGAGYCDSEVDTGYYDLGVGTPFSYMDADPSTSYMHGHGRGCGEHNEYLYYEAPACRIKRSQCNIVFRVDDDNQLEIDDVRVVEHIDFLLSFK

Homology

[Close]

BLAST of PI0013647 vs. ExPASy TrEMBL
Match: A0A5A7TDY5 (Serine/threonine-protein phosphatase 7 long form-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold128G00990 PE=4 SV=1)

HSP 1 Score: 115.5 bits (288), Expect = 1.2e-22
Identity = 61/108 (56.48%), Postives = 71/108 (65.74%), Query Frame = 0


Query: 1   MMPAFGAGYCDSEVDTGYYDLGVGTPFSYMDADPSTSYMHGHGRGCG--------EHNEY 60
           MMP FGAGYCDSEV TGYYD G+    SYMD  PS SYMHGHGR  G        +H + 
Sbjct: 308 MMPTFGAGYCDSEVGTGYYDAGISPLSSYMDVGPSNSYMHGHGRALGNITNICIMKHLQM 367

Query: 61  LYYEAPA---CRIKRSQCNIVFRVDDDNQLEIDDVRVVEHIDFLLSFK 98
              +       R KR++ NI FRV+ DNQL+ID+V+VVEHIDFLLS K
Sbjct: 368 YQIDKSTNKNQRTKRTENNIEFRVNVDNQLKIDEVQVVEHIDFLLSIK 415

[Close]

BLAST of PI0013647 vs. ExPASy TrEMBL
Match: A0A5A7V379 (GATA zinc finger domain-containing protein 10-like isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold29891G00010 PE=4 SV=1)

HSP 1 Score: 110.9 bits (276), Expect = 3.0e-21
Identity = 48/59 (81.36%), Postives = 52/59 (88.14%), Query Frame = 0


Query: 1   MMPAFGAGYCDSEVDTGYYDLGVGTPFSYMDADPSTSYMHGHGRGCGEHNEYLYYEAPA 60
           MMP FGAGYCDSEVDTGYYD+GVG+  SYM+  PS SYMHGHGRG GEHNEYLY+EAPA
Sbjct: 51  MMPTFGAGYCDSEVDTGYYDVGVGSSSSYMNVGPSASYMHGHGRGYGEHNEYLYHEAPA 109

[Close]

BLAST of PI0013647 vs. ExPASy TrEMBL
Match: A0A5D3BMS3 (GATA zinc finger domain-containing protein 10-like isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold612G00070 PE=4 SV=1)

HSP 1 Score: 110.9 bits (276), Expect = 3.0e-21
Identity = 52/86 (60.47%), Postives = 63/86 (73.26%), Query Frame = 0


Query: 1   MMPAFGAGYCDSEVDTGYYDLGVGTPFSYMDADPSTSYMHGHGRGCGEHNEYLYYEAPAC 60
           MMP FGAGYCDS++ TGYYD GVG   SYMD DPSTSYMHGHGRG G+HNEYLY+EAPA 
Sbjct: 57  MMPTFGAGYCDSKIGTGYYDAGVGPSSSYMDVDPSTSYMHGHGRGYGKHNEYLYHEAPAD 116

Query: 61  RIKRSQCNIVFRVDDDNQLEIDDVRV 87
              R +    ++ + +NQ + +  RV
Sbjct: 117 VSDRQE----YQQEPENQEDREQHRV 138

[Close]

BLAST of PI0013647 vs. ExPASy TrEMBL
Match: A0A5A7U3Y0 (GATA zinc finger domain-containing protein 10-like isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold264G00710 PE=4 SV=1)

HSP 1 Score: 110.9 bits (276), Expect = 3.0e-21
Identity = 52/86 (60.47%), Postives = 63/86 (73.26%), Query Frame = 0


Query: 1  MMPAFGAGYCDSEVDTGYYDLGVGTPFSYMDADPSTSYMHGHGRGCGEHNEYLYYEAPAC 60
          MMP FGAGYCDS++ TGYYD GVG   SYMD DPSTSYMHGHGRG G+HNEYLY+EAPA 
Sbjct: 3  MMPTFGAGYCDSKIGTGYYDAGVGPSSSYMDVDPSTSYMHGHGRGYGKHNEYLYHEAPAD 62

Query: 61 RIKRSQCNIVFRVDDDNQLEIDDVRV 87
             R +    ++ + +NQ + +  RV
Sbjct: 63 VSDRQE----YQQEPENQEDREQHRV 84

[Close]

BLAST of PI0013647 vs. ExPASy TrEMBL
Match: A0A5D3CXX3 (GATA zinc finger domain-containing protein 10-like isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold209G001390 PE=4 SV=1)

HSP 1 Score: 109.0 bits (271), Expect = 1.1e-20
Identity = 52/86 (60.47%), Postives = 61/86 (70.93%), Query Frame = 0


Query: 1   MMPAFGAGYCDSEVDTGYYDLGVGTPFSYMDADPSTSYMHGHGRGCGEHNEYLYYEAPAC 60
           MMP FGAGYCDSEV TGYYD G+G   SYMD  PS SYMHGHGRG GEHNEYLY+EAPA 
Sbjct: 51  MMPTFGAGYCDSEVSTGYYDAGIGPLSSYMDVGPSNSYMHGHGRGYGEHNEYLYHEAPAD 110

Query: 61  RIKRSQCNIVFRVDDDNQLEIDDVRV 87
              R +    ++ + +NQ + +  RV
Sbjct: 111 VSDRQE----YQQEPENQEDREQHRV 132

[Close]

BLAST of PI0013647 vs. NCBI nr
Match: KAA0041168.1 (serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 115.5 bits (288), Expect = 2.5e-22
Identity = 61/108 (56.48%), Postives = 71/108 (65.74%), Query Frame = 0


Query: 1   MMPAFGAGYCDSEVDTGYYDLGVGTPFSYMDADPSTSYMHGHGRGCG--------EHNEY 60
           MMP FGAGYCDSEV TGYYD G+    SYMD  PS SYMHGHGR  G        +H + 
Sbjct: 308 MMPTFGAGYCDSEVGTGYYDAGISPLSSYMDVGPSNSYMHGHGRALGNITNICIMKHLQM 367

Query: 61  LYYEAPA---CRIKRSQCNIVFRVDDDNQLEIDDVRVVEHIDFLLSFK 98
              +       R KR++ NI FRV+ DNQL+ID+V+VVEHIDFLLS K
Sbjct: 368 YQIDKSTNKNQRTKRTENNIEFRVNVDNQLKIDEVQVVEHIDFLLSIK 415

[Close]

BLAST of PI0013647 vs. NCBI nr
Match: KAA0061327.1 (GATA zinc finger domain-containing protein 10-like isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 110.9 bits (276), Expect = 6.1e-21
Identity = 48/59 (81.36%), Postives = 52/59 (88.14%), Query Frame = 0


Query: 1   MMPAFGAGYCDSEVDTGYYDLGVGTPFSYMDADPSTSYMHGHGRGCGEHNEYLYYEAPA 60
           MMP FGAGYCDSEVDTGYYD+GVG+  SYM+  PS SYMHGHGRG GEHNEYLY+EAPA
Sbjct: 51  MMPTFGAGYCDSEVDTGYYDVGVGSSSSYMNVGPSASYMHGHGRGYGEHNEYLYHEAPA 109

[Close]

BLAST of PI0013647 vs. NCBI nr
Match: TYK01111.1 (GATA zinc finger domain-containing protein 10-like isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 110.9 bits (276), Expect = 6.1e-21
Identity = 52/86 (60.47%), Postives = 63/86 (73.26%), Query Frame = 0


Query: 1   MMPAFGAGYCDSEVDTGYYDLGVGTPFSYMDADPSTSYMHGHGRGCGEHNEYLYYEAPAC 60
           MMP FGAGYCDS++ TGYYD GVG   SYMD DPSTSYMHGHGRG G+HNEYLY+EAPA 
Sbjct: 57  MMPTFGAGYCDSKIGTGYYDAGVGPSSSYMDVDPSTSYMHGHGRGYGKHNEYLYHEAPAD 116

Query: 61  RIKRSQCNIVFRVDDDNQLEIDDVRV 87
              R +    ++ + +NQ + +  RV
Sbjct: 117 VSDRQE----YQQEPENQEDREQHRV 138

[Close]

BLAST of PI0013647 vs. NCBI nr
Match: KAA0048355.1 (GATA zinc finger domain-containing protein 10-like isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 110.9 bits (276), Expect = 6.1e-21
Identity = 52/86 (60.47%), Postives = 63/86 (73.26%), Query Frame = 0


Query: 1  MMPAFGAGYCDSEVDTGYYDLGVGTPFSYMDADPSTSYMHGHGRGCGEHNEYLYYEAPAC 60
          MMP FGAGYCDS++ TGYYD GVG   SYMD DPSTSYMHGHGRG G+HNEYLY+EAPA 
Sbjct: 3  MMPTFGAGYCDSKIGTGYYDAGVGPSSSYMDVDPSTSYMHGHGRGYGKHNEYLYHEAPAD 62

Query: 61 RIKRSQCNIVFRVDDDNQLEIDDVRV 87
             R +    ++ + +NQ + +  RV
Sbjct: 63 VSDRQE----YQQEPENQEDREQHRV 84

[Close]

BLAST of PI0013647 vs. NCBI nr
Match: KAA0049532.1 (GATA zinc finger domain-containing protein 10-like isoform X2 [Cucumis melo var. makuwa] >TYK16210.1 GATA zinc finger domain-containing protein 10-like isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 109.0 bits (271), Expect = 2.3e-20
Identity = 52/86 (60.47%), Postives = 61/86 (70.93%), Query Frame = 0


Query: 1   MMPAFGAGYCDSEVDTGYYDLGVGTPFSYMDADPSTSYMHGHGRGCGEHNEYLYYEAPAC 60
           MMP FGAGYCDSEV TGYYD G+G   SYMD  PS SYMHGHGRG GEHNEYLY+EAPA 
Sbjct: 51  MMPTFGAGYCDSEVSTGYYDAGIGPLSSYMDVGPSNSYMHGHGRGYGEHNEYLYHEAPAD 110

Query: 61  RIKRSQCNIVFRVDDDNQLEIDDVRV 87
              R +    ++ + +NQ + +  RV
Sbjct: 111 VSDRQE----YQQEPENQEDREQHRV 132

The following BLAST results are available for this feature:

BLAST of PI0013647 vs.


Match Name	E-value	Identity	Description

BLAST of PI0013647 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TDY5	1.2e-22	56.48	Serine/threonine-protein phosphatase 7 long form-like protein OS=Cucumis melo va...	[more]
A0A5A7V379	3.0e-21	81.36	GATA zinc finger domain-containing protein 10-like isoform X2 OS=Cucumis melo va...	[more]
A0A5D3BMS3	3.0e-21	60.47	GATA zinc finger domain-containing protein 10-like isoform X2 OS=Cucumis melo va...	[more]
A0A5A7U3Y0	3.0e-21	60.47	GATA zinc finger domain-containing protein 10-like isoform X2 OS=Cucumis melo va...	[more]
A0A5D3CXX3	1.1e-20	60.47	GATA zinc finger domain-containing protein 10-like isoform X2 OS=Cucumis melo va...	[more]

BLAST of PI0013647 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0041168.1	2.5e-22	56.48	serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var....	[more]
KAA0061327.1	6.1e-21	81.36	GATA zinc finger domain-containing protein 10-like isoform X2 [Cucumis melo var....	[more]
TYK01111.1	6.1e-21	60.47	GATA zinc finger domain-containing protein 10-like isoform X2 [Cucumis melo var....	[more]
KAA0048355.1	6.1e-21	60.47	GATA zinc finger domain-containing protein 10-like isoform X2 [Cucumis melo var....	[more]
KAA0049532.1	2.3e-20	60.47	GATA zinc finger domain-containing protein 10-like isoform X2 [Cucumis melo var....	[more]

BLAST of PI0013647 vs. NCBI nr


Match Name	E-value	Identity	Description

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0013647.1	PI0013647.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010073	meristem maintenance