PI0013408 (gene) Melon (PI 482460) v1

Overview


Name	PI0013408
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	agamous-like MADS-box protein AGL80
Location	chr02: 194504 .. 195312 (+)
RNA-Seq Expression	PI0013408
Synteny	PI0013408

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACAAGGAAGAAAGTGAAACTTGCTTACATTGTAAATGACTCTGCAAGAAAGGCGACATACAAGAAGAGGAAGAGAGGGCTTATGAAAAAGGTTAGTGAATTAAGCACTCTTTGTGGGATTGAGGCATGTGCAATCATCTTTAGTCCCTATGATTCTCAACCCGAGCTCTGGCCTTCCCCTATTGGCGTCCAGCGCGTTCTTTCCCAGTTCAAGAAGATGCCCGAGATGGAGCAAAGTAAGAAGATGGTAAGTGTAGTAGTTTTGAAACATTTATAAAATATACTAATAAGGTCATGTTGCCATATTATATAAACATGTAGCTTCTTAAAGAATATAACAGAGAGGTATGTATCTCTTAAACAGGTGAACCAAGAGACGTTTTTGCGACAAAGGATTGCAAAGGCGAACGAGCAATTGAAGAAAATGAGAAAGGACAACCGGGAGAAAGAGATCACACGGTTGATGTTTCAGAGCCTCACTGCTGCAAAGGGGCTGCATGGACTTAACATGCTTGATTTGAACGACCTAGGTTGGCTCATTGATCAAAATCTTAAAGATATTACTATACGCATTGACTCTCTTAAAAAGCCTTCTCCTTCACAACCTCAAGCTCAGGTTCAGGCTCAAGCGCAGGCTCAGGCTCAGGCTCAGGCTCCACCGACTCAGCCTCAAACCGCGGCATGGCTGATGGAGCTTGTGAGCCCTCAAGATCAAATGGGTTTGTTGGGGATGATATGCTTTTGCCTTTTGGGGATCAAACTTATAACCATAATAATGCAATGTGGTCTAATGCCTTTTTCCCTTAG

mRNA sequence

ATGACAAGGAAGAAAGTGAAACTTGCTTACATTGTAAATGACTCTGCAAGAAAGGCGACATACAAGAAGAGGAAGAGAGGGCTTATGAAAAAGGTTAGTGAATTAAGCACTCTTTGTGGGATTGAGGCATGTGCAATCATCTTTAGTCCCTATGATTCTCAACCCGAGCTCTGGCCTTCCCCTATTGGCGTCCAGCGCGTTCTTTCCCAGTTCAAGAAGATGCCCGAGATGGAGCAAAGTAAGAAGATGGTGAACCAAGAGACGTTTTTGCGACAAAGGATTGCAAAGGCGAACGAGCAATTGAAGAAAATGAGAAAGGACAACCGGGAGAAAGAGATCACACGGTTGATGTTTCAGAGCCTCACTGCTGCAAAGGGGCTGCATGGACTTAACATGCTTGATTTGAACGACCTAGGTTGGCTCATTGATCAAAATCTTAAAGATATTACTATACGCATTGACTCTCTTAAAAAGCCTTCTCCTTCACAACCTCAAGCTCAGGTTCAGGCTCAAGCGCAGGCTCAGGCTCAGGCTCAGGCTCCACCGACTCAATCAAATGGGTTTGTTGGGGATGATATGCTTTTGCCTTTTGGGGATCAAACTTATAACCATAATAATGCAATGTGGTCTAATGCCTTTTTCCCTTAG

Coding sequence (CDS)

ATGACAAGGAAGAAAGTGAAACTTGCTTACATTGTAAATGACTCTGCAAGAAAGGCGACATACAAGAAGAGGAAGAGAGGGCTTATGAAAAAGGTTAGTGAATTAAGCACTCTTTGTGGGATTGAGGCATGTGCAATCATCTTTAGTCCCTATGATTCTCAACCCGAGCTCTGGCCTTCCCCTATTGGCGTCCAGCGCGTTCTTTCCCAGTTCAAGAAGATGCCCGAGATGGAGCAAAGTAAGAAGATGGTGAACCAAGAGACGTTTTTGCGACAAAGGATTGCAAAGGCGAACGAGCAATTGAAGAAAATGAGAAAGGACAACCGGGAGAAAGAGATCACACGGTTGATGTTTCAGAGCCTCACTGCTGCAAAGGGGCTGCATGGACTTAACATGCTTGATTTGAACGACCTAGGTTGGCTCATTGATCAAAATCTTAAAGATATTACTATACGCATTGACTCTCTTAAAAAGCCTTCTCCTTCACAACCTCAAGCTCAGGTTCAGGCTCAAGCGCAGGCTCAGGCTCAGGCTCAGGCTCCACCGACTCAATCAAATGGGTTTGTTGGGGATGATATGCTTTTGCCTTTTGGGGATCAAACTTATAACCATAATAATGCAATGTGGTCTAATGCCTTTTTCCCTTAG

Protein sequence

MTRKKVKLAYIVNDSARKATYKKRKRGLMKKVSELSTLCGIEACAIIFSPYDSQPELWPSPIGVQRVLSQFKKMPEMEQSKKMVNQETFLRQRIAKANEQLKKMRKDNREKEITRLMFQSLTAAKGLHGLNMLDLNDLGWLIDQNLKDITIRIDSLKKPSPSQPQAQVQAQAQAQAQAQAPPTQSNGFVGDDMLLPFGDQTYNHNNAMWSNAFFP

Homology

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BLAST of PI0013408 vs. ExPASy Swiss-Prot
Match: Q9FJK3 (Agamous-like MADS-box protein AGL80 OS=Arabidopsis thaliana OX=3702 GN=AGL80 PE=1 SV=1)

HSP 1 Score: 200.7 bits (509), Expect = 1.7e-50
Identity = 107/181 (59.12%), Postives = 138/181 (76.24%), Query Frame = 0


Query: 1   MTRKKVKLAYIVNDSARKATYKKRKRGLMKKVSELSTLCGIEACAIIFSPYDSQPELWPS 60
           MTRKKVKLAYI NDS+RKAT+KKRK+GLMKKV ELSTLCGI ACAII+SPYD+ PE+WPS
Sbjct: 1   MTRKKVKLAYISNDSSRKATFKKRKKGLMKKVHELSTLCGITACAIIYSPYDTNPEVWPS 60

Query: 61  PIGVQRVLSQFKKMPEMEQSKKMVNQETFLRQRIAKANEQLKKMRKDNREKEITRLMFQS 120
             GVQRV+S+F+ +PEM+Q KKMV+QE FL+QRIAKA E L++ RKD+RE E+T +MFQ 
Sbjct: 61  NSGVQRVVSEFRTLPEMDQHKKMVDQEGFLKQRIAKATETLRRQRKDSRELEMTEVMFQC 120

Query: 121 LTAAKGLHGLNMLDLNDLGWLIDQNLKDITIRIDSLKKPSPSQPQAQVQAQAQAQAQAQA 180
           L     +  LN++DLNDLG++I+Q LKD+  RI+ L+       ++   A A ++     
Sbjct: 121 LIGNMEMFHLNIVDLNDLGYMIEQYLKDVNRRIEILRNSGTEIGESSSVAVAASEGNIPM 180

Query: 181 P 182
           P
Sbjct: 181 P 181

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BLAST of PI0013408 vs. ExPASy Swiss-Prot
Match: Q7XJK8 (MADS-box transcription factor PHERES 2 OS=Arabidopsis thaliana OX=3702 GN=PHE2 PE=1 SV=1)

HSP 1 Score: 141.0 bits (354), Expect = 1.6e-32
Identity = 77/174 (44.25%), Postives = 116/174 (66.67%), Query Frame = 0


Query: 3   RKKVKLAYIVNDSARKATYKKRKRGLMKKVSELSTLCGIEACAIIFSPYDSQPELWPSPI 62
           ++K+KL+ I N  +RK T+ KRK+G+ KK++EL TLCG+EACA+++SP++S PE WPS  
Sbjct: 2   KRKMKLSLIENSVSRKTTFTKRKKGMTKKLTELVTLCGVEACAVVYSPFNSIPEAWPSRE 61

Query: 63  GVQRVLSQFKKMPEMEQSKKMVNQETFLRQRIAKANEQLKKMRKDNREKEITRLMFQSLT 122
           GV+ V+S+F ++  ++++KKMV+QETF+ QRIAK  EQL+K+R +N   +I  LMF  L 
Sbjct: 62  GVEDVVSKFMELSVLDRTKKMVDQETFISQRIAKEKEQLQKLRDENHNSQIRELMFGCLK 121

Query: 123 AAKGLHGLNMLDLNDLGWLIDQNLKDITIRIDSLKKPSPSQPQAQVQAQAQAQA 177
               ++ L+  DL DL   ID+ L  +T RI+ L +   S     +   A A A
Sbjct: 122 GETNVYNLDGRDLQDLSLYIDKYLNGLTRRIEILIENGESSSSLPLPIVANAAA 175

[Close]

BLAST of PI0013408 vs. ExPASy Swiss-Prot
Match: O80805 (MADS-box transcription factor PHERES 1 OS=Arabidopsis thaliana OX=3702 GN=PHE1 PE=1 SV=1)

HSP 1 Score: 140.6 bits (353), Expect = 2.1e-32
Identity = 76/160 (47.50%), Postives = 111/160 (69.38%), Query Frame = 0


Query: 3   RKKVKLAYIVNDSARKATYKKRKRGLMKKVSELSTLCGIEACAIIFSPYDSQPELWPSPI 62
           R K+KL++I NDS RK T+ KRK+G++KK +EL TLCG++ACA+I SPY+S  E WPS  
Sbjct: 2   RGKMKLSFIENDSVRKTTFTKRKKGMLKKFNELVTLCGVDACAVIRSPYNSIQEPWPSRE 61

Query: 63  GVQRVLSQFKKMPEMEQSKKMVNQETFLRQRIAKANEQLKKMRKDNREKEITRLMFQSLT 122
           GV+ V+S+F +   ++++KKMV+QETFLRQRIAK  E+L+K+R +NR  +I  LMF  L 
Sbjct: 62  GVEEVMSKFMEFSVLDRTKKMVDQETFLRQRIAKETERLQKLRDENRNSQIRDLMFGCLK 121

Query: 123 AAKGLHGLNMLDLNDLGWLIDQNLKDITIRIDSLKKPSPS 163
               +  L+  DL DL   +++ L  +  R++ LK+   S
Sbjct: 122 GEVDVSHLHGRDLLDLNVFLNKYLNGVIRRVEILKENGES 161

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BLAST of PI0013408 vs. ExPASy Swiss-Prot
Match: Q7XJK6 (Agamous-like MADS-box protein AGL36 OS=Arabidopsis thaliana OX=3702 GN=AGL36 PE=1 SV=1)

HSP 1 Score: 133.3 bits (334), Expect = 3.3e-30
Identity = 71/159 (44.65%), Postives = 105/159 (66.04%), Query Frame = 0


Query: 4   KKVKLAYIVNDSARKATYKKRKRGLMKKVSELSTLCGIEACAIIFSPYDSQPELWPSPIG 63
           KKVKL+ I N+ +RK ++ KRK G+ KK+ ELSTLCG++ACA+I+SP+   PE WPS  G
Sbjct: 2   KKVKLSLIANERSRKTSFIKRKDGIFKKLHELSTLCGVQACALIYSPFIPVPESWPSREG 61

Query: 64  VQRVLSQFKKMPEMEQSKKMVNQETFLRQRIAKANEQLKKMRKDNREKEITRLMFQSLTA 123
            ++V S+F +MP   ++KKM++QET+L +RI KA EQLK +  +NRE ++ R MF  +  
Sbjct: 62  AKKVASRFLEMPPTARTKKMMDQETYLMERITKAKEQLKNLAAENRELQVRRFMFDCVEG 121

Query: 124 AKGLHGLNMLDLNDLGWLIDQNLKDITIRIDSLKKPSPS 163
               +  +  DL DL   I+  L  +  RI+S+K+   S
Sbjct: 122 KMSQYHYDAKDLQDLQSCINLYLDQLNGRIESIKENGES 160

[Close]

BLAST of PI0013408 vs. ExPASy Swiss-Prot
Match: Q7XJK5 (Agamous-like MADS-box protein AGL90 OS=Arabidopsis thaliana OX=3702 GN=AGL90 PE=1 SV=2)

HSP 1 Score: 130.6 bits (327), Expect = 2.2e-29
Identity = 69/159 (43.40%), Postives = 104/159 (65.41%), Query Frame = 0


Query: 4   KKVKLAYIVNDSARKATYKKRKRGLMKKVSELSTLCGIEACAIIFSPYDSQPELWPSPIG 63
           KKVKL+ I N+ +RK ++ KRK G+ KK+ ELSTLCG++ACA+I+SP+   PE WPS  G
Sbjct: 2   KKVKLSLIANERSRKTSFMKRKNGIFKKLHELSTLCGVQACALIYSPFIPVPESWPSREG 61

Query: 64  VQRVLSQFKKMPEMEQSKKMVNQETFLRQRIAKANEQLKKMRKDNREKEITRLMFQSLTA 123
            ++V S+F +MP   +++KM++QET L +RI KA EQLK +  +NRE ++ R MF  +  
Sbjct: 62  AKKVASKFLEMPRTARTRKMMDQETHLMERITKAKEQLKNLAAENRELQVRRFMFDCVEG 121

Query: 124 AKGLHGLNMLDLNDLGWLIDQNLKDITIRIDSLKKPSPS 163
               +  +  DL DL   ++  L  +  RI+S+K+   S
Sbjct: 122 KMSQYRYDAKDLQDLLSCMNLYLDQLNGRIESIKENGES 160

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BLAST of PI0013408 vs. ExPASy TrEMBL
Match: A0A0A0LVS3 (MADS-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G560740 PE=4 SV=1)

HSP 1 Score: 377.5 bits (968), Expect = 3.8e-101
Identity = 205/225 (91.11%), Postives = 205/225 (91.11%), Query Frame = 0


Query: 1   MTRKKVKLAYIVNDSARKATYKKRKRGLMKKVSELSTLCGIEACAIIFSPYDSQPELWPS 60
           MTRKKVKLAYI NDSARKATYKKRKRGLMKKVSELSTLCGIEACAIIFSPYDSQPELWPS
Sbjct: 1   MTRKKVKLAYIANDSARKATYKKRKRGLMKKVSELSTLCGIEACAIIFSPYDSQPELWPS 60

Query: 61  PIGVQRVLSQFKKMPEMEQSKKMVNQETFLRQRIAKANEQLKKMRKDNREKEITRLMFQS 120
           PIGVQRVLSQFKKMPEMEQSKKMVNQETFLRQRIAKANEQLKKMRKDNREKEITRLMFQS
Sbjct: 61  PIGVQRVLSQFKKMPEMEQSKKMVNQETFLRQRIAKANEQLKKMRKDNREKEITRLMFQS 120

Query: 121 LTAAKGLHGLNMLDLNDLGWLIDQNLKDITIRIDSLK-KPSPSQPQAQVQAQAQA---QA 180
           LTAAKGLHGLNMLDLNDLGWLIDQNLKDITIRIDSLK KPS SQPQAQVQAQAQA   Q 
Sbjct: 121 LTAAKGLHGLNMLDLNDLGWLIDQNLKDITIRIDSLKIKPSSSQPQAQVQAQAQAPPTQP 180

Query: 181 QAQA------PPTQSNGFVGDDMLLPFGDQTYNHNNAMWSNAFFP 216
           Q  A       P    GFVGDDMLLPFGDQTYNHNNAMWSNAFFP
Sbjct: 181 QTAAWLMELVSPQDQMGFVGDDMLLPFGDQTYNHNNAMWSNAFFP 225

[Close]

BLAST of PI0013408 vs. ExPASy TrEMBL
Match: A0A5A7U988 (Agamous-like MADS-box protein AGL80 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16G004670 PE=4 SV=1)

HSP 1 Score: 376.7 bits (966), Expect = 6.4e-101
Identity = 200/223 (89.69%), Postives = 200/223 (89.69%), Query Frame = 0


Query: 1   MTRKKVKLAYIVNDSARKATYKKRKRGLMKKVSELSTLCGIEACAIIFSPYDSQPELWPS 60
           MTRKKVKLAYI NDSARKATYKKRKRGLMKKVSELSTLCGIEACAIIFSPYDSQPELWPS
Sbjct: 1   MTRKKVKLAYIANDSARKATYKKRKRGLMKKVSELSTLCGIEACAIIFSPYDSQPELWPS 60

Query: 61  PIGVQRVLSQFKKMPEMEQSKKMVNQETFLRQRIAKANEQLKKMRKDNREKEITRLMFQS 120
           PIGVQRVLSQFKKMPEMEQSKKMVNQETFLRQRIAKANEQLKKMRKDNREKEITRLMFQS
Sbjct: 61  PIGVQRVLSQFKKMPEMEQSKKMVNQETFLRQRIAKANEQLKKMRKDNREKEITRLMFQS 120

Query: 121 LTAAKGLHGLNMLDLNDLGWLIDQNLKDITIRIDSLKKPSPSQPQAQVQAQAQAQAQAQ- 180
           LTAAKGLHGLNMLDLNDLGWLIDQNLKDITIRIDSLKKPS  QPQAQ QAQA    Q Q 
Sbjct: 121 LTAAKGLHGLNMLDLNDLGWLIDQNLKDITIRIDSLKKPSLPQPQAQAQAQAPPTTQPQT 180

Query: 181 -------APPTQSNGFVGDDMLLPFGDQTYNHNNAMWSNAFFP 216
                    P    GFVGDDMLLPFGDQTYNHNNAMWSNAFFP
Sbjct: 181 AAWLMELVSPQDQMGFVGDDMLLPFGDQTYNHNNAMWSNAFFP 223

[Close]

BLAST of PI0013408 vs. ExPASy TrEMBL
Match: A0A1S3BPF2 (agamous-like MADS-box protein AGL80 OS=Cucumis melo OX=3656 GN=LOC103492094 PE=4 SV=1)

HSP 1 Score: 376.7 bits (966), Expect = 6.4e-101
Identity = 200/223 (89.69%), Postives = 200/223 (89.69%), Query Frame = 0


Query: 1   MTRKKVKLAYIVNDSARKATYKKRKRGLMKKVSELSTLCGIEACAIIFSPYDSQPELWPS 60
           MTRKKVKLAYI NDSARKATYKKRKRGLMKKVSELSTLCGIEACAIIFSPYDSQPELWPS
Sbjct: 1   MTRKKVKLAYIANDSARKATYKKRKRGLMKKVSELSTLCGIEACAIIFSPYDSQPELWPS 60

Query: 61  PIGVQRVLSQFKKMPEMEQSKKMVNQETFLRQRIAKANEQLKKMRKDNREKEITRLMFQS 120
           PIGVQRVLSQFKKMPEMEQSKKMVNQETFLRQRIAKANEQLKKMRKDNREKEITRLMFQS
Sbjct: 61  PIGVQRVLSQFKKMPEMEQSKKMVNQETFLRQRIAKANEQLKKMRKDNREKEITRLMFQS 120

Query: 121 LTAAKGLHGLNMLDLNDLGWLIDQNLKDITIRIDSLKKPSPSQPQAQVQAQAQAQAQAQ- 180
           LTAAKGLHGLNMLDLNDLGWLIDQNLKDITIRIDSLKKPS  QPQAQ QAQA    Q Q 
Sbjct: 121 LTAAKGLHGLNMLDLNDLGWLIDQNLKDITIRIDSLKKPSLPQPQAQAQAQAPPTTQPQT 180

Query: 181 -------APPTQSNGFVGDDMLLPFGDQTYNHNNAMWSNAFFP 216
                    P    GFVGDDMLLPFGDQTYNHNNAMWSNAFFP
Sbjct: 181 AAWLMELVSPQDQMGFVGDDMLLPFGDQTYNHNNAMWSNAFFP 223

[Close]

BLAST of PI0013408 vs. ExPASy TrEMBL
Match: A0A6J1HW01 (agamous-like MADS-box protein AGL80 OS=Cucurbita maxima OX=3661 GN=LOC111467976 PE=4 SV=1)

HSP 1 Score: 349.7 bits (896), Expect = 8.4e-93
Identity = 187/222 (84.23%), Postives = 193/222 (86.94%), Query Frame = 0


Query: 1   MTRKKVKLAYIVNDSARKATYKKRKRGLMKKVSELSTLCGIEACAIIFSPYDSQPELWPS 60
           MTRKKVKLAYIVNDSARKAT+KKRKRGLMKKVSELSTLCGIEACAI+FSPYD+QPELWPS
Sbjct: 1   MTRKKVKLAYIVNDSARKATFKKRKRGLMKKVSELSTLCGIEACAIVFSPYDAQPELWPS 60

Query: 61  PIGVQRVLSQFKKMPEMEQSKKMVNQETFLRQRIAKANEQLKKMRKDNREKEITRLMFQS 120
           PIGVQRVLSQFKKMPEMEQSKKMVNQETFLRQRIAKAN+QLKKMRKDNREKE+TRLMFQS
Sbjct: 61  PIGVQRVLSQFKKMPEMEQSKKMVNQETFLRQRIAKANDQLKKMRKDNREKEMTRLMFQS 120

Query: 121 LTAAKGLHGLNMLDLNDLGWLIDQNLKDITIRIDSLKKPSP-SQPQAQVQAQAQAQAQAQ 180
           LTAAKGLH LNMLDLNDL WLIDQNLKDIT RIDSLKKP P SQP      Q     Q  
Sbjct: 121 LTAAKGLHALNMLDLNDLTWLIDQNLKDITKRIDSLKKPPPRSQPHPHPHPQPPPPPQTA 180

Query: 181 A------PPTQSNGFVGDDMLLPFGDQTYNHNNAMWSNAFFP 216
           A       P    GFVGDDMLLPFGDQTY+HNNAMWSNAFFP
Sbjct: 181 AWLMELVSPQDQMGFVGDDMLLPFGDQTYSHNNAMWSNAFFP 222

[Close]

BLAST of PI0013408 vs. ExPASy TrEMBL
Match: A0A6J1HBW4 (agamous-like MADS-box protein AGL80 OS=Cucurbita moschata OX=3662 GN=LOC111462033 PE=4 SV=1)

HSP 1 Score: 347.4 bits (890), Expect = 4.2e-92
Identity = 186/222 (83.78%), Postives = 192/222 (86.49%), Query Frame = 0


Query: 1   MTRKKVKLAYIVNDSARKATYKKRKRGLMKKVSELSTLCGIEACAIIFSPYDSQPELWPS 60
           MTRKKVKLAYIVNDSARKAT+KKRKRGLMKKVSELSTLCGIEACAI+FSPYD+QPELWPS
Sbjct: 1   MTRKKVKLAYIVNDSARKATFKKRKRGLMKKVSELSTLCGIEACAIVFSPYDAQPELWPS 60

Query: 61  PIGVQRVLSQFKKMPEMEQSKKMVNQETFLRQRIAKANEQLKKMRKDNREKEITRLMFQS 120
           PIGVQRVLSQFKKMPEMEQSKKMVNQETFLRQRIAKAN+QLKKMRKDNREKE+TRLMFQS
Sbjct: 61  PIGVQRVLSQFKKMPEMEQSKKMVNQETFLRQRIAKANDQLKKMRKDNREKEMTRLMFQS 120

Query: 121 LTAAKGLHGLNMLDLNDLGWLIDQNLKDITIRIDSLKKPSP-SQPQAQVQAQAQAQAQAQ 180
           LTAAKGLH LNMLDLNDL WLIDQNLKDIT RIDSLKKP P SQP      Q     Q  
Sbjct: 121 LTAAKGLHALNMLDLNDLTWLIDQNLKDITKRIDSLKKPPPHSQPHPHPHPQPPPPPQTA 180

Query: 181 A------PPTQSNGFVGDDMLLPFGDQTYNHNNAMWSNAFFP 216
           A       P    GFV DDMLLPFGDQTY+HNNAMWSNAFFP
Sbjct: 181 AWLMELVSPQDQMGFVADDMLLPFGDQTYSHNNAMWSNAFFP 222

[Close]

BLAST of PI0013408 vs. NCBI nr
Match: XP_004135760.1 (agamous-like MADS-box protein AGL80 [Cucumis sativus] >KGN65990.1 hypothetical protein Csa_006882 [Cucumis sativus])

HSP 1 Score: 377.5 bits (968), Expect = 7.8e-101
Identity = 205/225 (91.11%), Postives = 205/225 (91.11%), Query Frame = 0


Query: 1   MTRKKVKLAYIVNDSARKATYKKRKRGLMKKVSELSTLCGIEACAIIFSPYDSQPELWPS 60
           MTRKKVKLAYI NDSARKATYKKRKRGLMKKVSELSTLCGIEACAIIFSPYDSQPELWPS
Sbjct: 1   MTRKKVKLAYIANDSARKATYKKRKRGLMKKVSELSTLCGIEACAIIFSPYDSQPELWPS 60

Query: 61  PIGVQRVLSQFKKMPEMEQSKKMVNQETFLRQRIAKANEQLKKMRKDNREKEITRLMFQS 120
           PIGVQRVLSQFKKMPEMEQSKKMVNQETFLRQRIAKANEQLKKMRKDNREKEITRLMFQS
Sbjct: 61  PIGVQRVLSQFKKMPEMEQSKKMVNQETFLRQRIAKANEQLKKMRKDNREKEITRLMFQS 120

Query: 121 LTAAKGLHGLNMLDLNDLGWLIDQNLKDITIRIDSLK-KPSPSQPQAQVQAQAQA---QA 180
           LTAAKGLHGLNMLDLNDLGWLIDQNLKDITIRIDSLK KPS SQPQAQVQAQAQA   Q 
Sbjct: 121 LTAAKGLHGLNMLDLNDLGWLIDQNLKDITIRIDSLKIKPSSSQPQAQVQAQAQAPPTQP 180

Query: 181 QAQA------PPTQSNGFVGDDMLLPFGDQTYNHNNAMWSNAFFP 216
           Q  A       P    GFVGDDMLLPFGDQTYNHNNAMWSNAFFP
Sbjct: 181 QTAAWLMELVSPQDQMGFVGDDMLLPFGDQTYNHNNAMWSNAFFP 225

[Close]

BLAST of PI0013408 vs. NCBI nr
Match: XP_008450513.1 (PREDICTED: agamous-like MADS-box protein AGL80 [Cucumis melo] >KAA0050967.1 agamous-like MADS-box protein AGL80 [Cucumis melo var. makuwa] >TYK10313.1 agamous-like MADS-box protein AGL80 [Cucumis melo var. makuwa])

HSP 1 Score: 376.7 bits (966), Expect = 1.3e-100
Identity = 200/223 (89.69%), Postives = 200/223 (89.69%), Query Frame = 0


Query: 1   MTRKKVKLAYIVNDSARKATYKKRKRGLMKKVSELSTLCGIEACAIIFSPYDSQPELWPS 60
           MTRKKVKLAYI NDSARKATYKKRKRGLMKKVSELSTLCGIEACAIIFSPYDSQPELWPS
Sbjct: 1   MTRKKVKLAYIANDSARKATYKKRKRGLMKKVSELSTLCGIEACAIIFSPYDSQPELWPS 60

Query: 61  PIGVQRVLSQFKKMPEMEQSKKMVNQETFLRQRIAKANEQLKKMRKDNREKEITRLMFQS 120
           PIGVQRVLSQFKKMPEMEQSKKMVNQETFLRQRIAKANEQLKKMRKDNREKEITRLMFQS
Sbjct: 61  PIGVQRVLSQFKKMPEMEQSKKMVNQETFLRQRIAKANEQLKKMRKDNREKEITRLMFQS 120

Query: 121 LTAAKGLHGLNMLDLNDLGWLIDQNLKDITIRIDSLKKPSPSQPQAQVQAQAQAQAQAQ- 180
           LTAAKGLHGLNMLDLNDLGWLIDQNLKDITIRIDSLKKPS  QPQAQ QAQA    Q Q 
Sbjct: 121 LTAAKGLHGLNMLDLNDLGWLIDQNLKDITIRIDSLKKPSLPQPQAQAQAQAPPTTQPQT 180

Query: 181 -------APPTQSNGFVGDDMLLPFGDQTYNHNNAMWSNAFFP 216
                    P    GFVGDDMLLPFGDQTYNHNNAMWSNAFFP
Sbjct: 181 AAWLMELVSPQDQMGFVGDDMLLPFGDQTYNHNNAMWSNAFFP 223

[Close]

BLAST of PI0013408 vs. NCBI nr
Match: XP_022968841.1 (agamous-like MADS-box protein AGL80 [Cucurbita maxima])

HSP 1 Score: 349.7 bits (896), Expect = 1.7e-92
Identity = 187/222 (84.23%), Postives = 193/222 (86.94%), Query Frame = 0


Query: 1   MTRKKVKLAYIVNDSARKATYKKRKRGLMKKVSELSTLCGIEACAIIFSPYDSQPELWPS 60
           MTRKKVKLAYIVNDSARKAT+KKRKRGLMKKVSELSTLCGIEACAI+FSPYD+QPELWPS
Sbjct: 1   MTRKKVKLAYIVNDSARKATFKKRKRGLMKKVSELSTLCGIEACAIVFSPYDAQPELWPS 60

Query: 61  PIGVQRVLSQFKKMPEMEQSKKMVNQETFLRQRIAKANEQLKKMRKDNREKEITRLMFQS 120
           PIGVQRVLSQFKKMPEMEQSKKMVNQETFLRQRIAKAN+QLKKMRKDNREKE+TRLMFQS
Sbjct: 61  PIGVQRVLSQFKKMPEMEQSKKMVNQETFLRQRIAKANDQLKKMRKDNREKEMTRLMFQS 120

Query: 121 LTAAKGLHGLNMLDLNDLGWLIDQNLKDITIRIDSLKKPSP-SQPQAQVQAQAQAQAQAQ 180
           LTAAKGLH LNMLDLNDL WLIDQNLKDIT RIDSLKKP P SQP      Q     Q  
Sbjct: 121 LTAAKGLHALNMLDLNDLTWLIDQNLKDITKRIDSLKKPPPRSQPHPHPHPQPPPPPQTA 180

Query: 181 A------PPTQSNGFVGDDMLLPFGDQTYNHNNAMWSNAFFP 216
           A       P    GFVGDDMLLPFGDQTY+HNNAMWSNAFFP
Sbjct: 181 AWLMELVSPQDQMGFVGDDMLLPFGDQTYSHNNAMWSNAFFP 222

[Close]

BLAST of PI0013408 vs. NCBI nr
Match: XP_023538956.1 (agamous-like MADS-box protein AGL80 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 348.2 bits (892), Expect = 5.1e-92
Identity = 185/224 (82.59%), Postives = 191/224 (85.27%), Query Frame = 0


Query: 1   MTRKKVKLAYIVNDSARKATYKKRKRGLMKKVSELSTLCGIEACAIIFSPYDSQPELWPS 60
           MTRKKVKLAYIVNDSARKAT+KKRKRGLMKKVSELSTLCGIEACAI+FSPYD+QPELWPS
Sbjct: 1   MTRKKVKLAYIVNDSARKATFKKRKRGLMKKVSELSTLCGIEACAIVFSPYDAQPELWPS 60

Query: 61  PIGVQRVLSQFKKMPEMEQSKKMVNQETFLRQRIAKANEQLKKMRKDNREKEITRLMFQS 120
           PIGVQRVLSQFKKMPEMEQSKKMVNQETFLRQRIAKAN+QLKKMRKDNREKE+TRLMFQS
Sbjct: 61  PIGVQRVLSQFKKMPEMEQSKKMVNQETFLRQRIAKANDQLKKMRKDNREKEMTRLMFQS 120

Query: 121 LTAAKGLHGLNMLDLNDLGWLIDQNLKDITIRIDSLKKPSP---------SQPQAQVQAQ 180
           LTAAKGLH LNMLDLNDL WLIDQNLKDIT RIDSLKKP P           PQ     Q
Sbjct: 121 LTAAKGLHALNMLDLNDLTWLIDQNLKDITKRIDSLKKPPPHSQPHPHPHPHPQPPPPPQ 180

Query: 181 AQAQAQAQAPPTQSNGFVGDDMLLPFGDQTYNHNNAMWSNAFFP 216
             A       P    GFVGDDMLLPFGDQTY+HNNAMWSNAFFP
Sbjct: 181 TAAWLMELVSPQDQMGFVGDDMLLPFGDQTYSHNNAMWSNAFFP 224

[Close]

BLAST of PI0013408 vs. NCBI nr
Match: XP_022961458.1 (agamous-like MADS-box protein AGL80 [Cucurbita moschata] >KAG6590517.1 Agamous-like MADS-box protein AGL80, partial [Cucurbita argyrosperma subsp. sororia] >KAG7024050.1 Agamous-like MADS-box protein AGL80, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 347.4 bits (890), Expect = 8.6e-92
Identity = 186/222 (83.78%), Postives = 192/222 (86.49%), Query Frame = 0


Query: 1   MTRKKVKLAYIVNDSARKATYKKRKRGLMKKVSELSTLCGIEACAIIFSPYDSQPELWPS 60
           MTRKKVKLAYIVNDSARKAT+KKRKRGLMKKVSELSTLCGIEACAI+FSPYD+QPELWPS
Sbjct: 1   MTRKKVKLAYIVNDSARKATFKKRKRGLMKKVSELSTLCGIEACAIVFSPYDAQPELWPS 60

Query: 61  PIGVQRVLSQFKKMPEMEQSKKMVNQETFLRQRIAKANEQLKKMRKDNREKEITRLMFQS 120
           PIGVQRVLSQFKKMPEMEQSKKMVNQETFLRQRIAKAN+QLKKMRKDNREKE+TRLMFQS
Sbjct: 61  PIGVQRVLSQFKKMPEMEQSKKMVNQETFLRQRIAKANDQLKKMRKDNREKEMTRLMFQS 120

Query: 121 LTAAKGLHGLNMLDLNDLGWLIDQNLKDITIRIDSLKKPSP-SQPQAQVQAQAQAQAQAQ 180
           LTAAKGLH LNMLDLNDL WLIDQNLKDIT RIDSLKKP P SQP      Q     Q  
Sbjct: 121 LTAAKGLHALNMLDLNDLTWLIDQNLKDITKRIDSLKKPPPHSQPHPHPHPQPPPPPQTA 180

Query: 181 A------PPTQSNGFVGDDMLLPFGDQTYNHNNAMWSNAFFP 216
           A       P    GFV DDMLLPFGDQTY+HNNAMWSNAFFP
Sbjct: 181 AWLMELVSPQDQMGFVADDMLLPFGDQTYSHNNAMWSNAFFP 222

[Close]

BLAST of PI0013408 vs. TAIR 10
Match: AT5G48670.1 (AGAMOUS-like 80 )

HSP 1 Score: 200.7 bits (509), Expect = 1.2e-51
Identity = 107/181 (59.12%), Postives = 138/181 (76.24%), Query Frame = 0


Query: 1   MTRKKVKLAYIVNDSARKATYKKRKRGLMKKVSELSTLCGIEACAIIFSPYDSQPELWPS 60
           MTRKKVKLAYI NDS+RKAT+KKRK+GLMKKV ELSTLCGI ACAII+SPYD+ PE+WPS
Sbjct: 1   MTRKKVKLAYISNDSSRKATFKKRKKGLMKKVHELSTLCGITACAIIYSPYDTNPEVWPS 60

Query: 61  PIGVQRVLSQFKKMPEMEQSKKMVNQETFLRQRIAKANEQLKKMRKDNREKEITRLMFQS 120
             GVQRV+S+F+ +PEM+Q KKMV+QE FL+QRIAKA E L++ RKD+RE E+T +MFQ 
Sbjct: 61  NSGVQRVVSEFRTLPEMDQHKKMVDQEGFLKQRIAKATETLRRQRKDSRELEMTEVMFQC 120

Query: 121 LTAAKGLHGLNMLDLNDLGWLIDQNLKDITIRIDSLKKPSPSQPQAQVQAQAQAQAQAQA 180
           L     +  LN++DLNDLG++I+Q LKD+  RI+ L+       ++   A A ++     
Sbjct: 121 LIGNMEMFHLNIVDLNDLGYMIEQYLKDVNRRIEILRNSGTEIGESSSVAVAASEGNIPM 180

Query: 181 P 182
           P
Sbjct: 181 P 181

[Close]

BLAST of PI0013408 vs. TAIR 10
Match: AT5G26630.1 (MADS-box transcription factor family protein )

HSP 1 Score: 155.2 bits (391), Expect = 5.8e-38
Identity = 82/171 (47.95%), Postives = 119/171 (69.59%), Query Frame = 0


Query: 1   MTRKKVKLAYIVNDSARKATYKKRKRGLMKKVSELSTLCGIEACAIIFSPYDSQPELWPS 60
           MTR+KVK+ +I N++ARK+T+KKRK+GL+KK  EL  LCG+   A++ SPY+  PE+WPS
Sbjct: 1   MTRQKVKMTFIENETARKSTFKKRKKGLLKKAQELGILCGVPIFAVVNSPYELNPEVWPS 60

Query: 61  PIGVQRVLSQFKKMPEMEQSKKMVNQETFLRQRIAKANEQLKKMRKDNREKEITRLMFQS 120
                +V+SQ+K M  M+++KKMVNQETFL+QRI KA E  KK+RK+N+E E+  +MF  
Sbjct: 61  REAANQVVSQWKTMSVMDKTKKMVNQETFLQQRITKATESWKKLRKENKELEMKNIMFDC 120

Query: 121 LTAAKGLHGLNMLDLNDLGWLIDQNLKDITIRIDSLKKPS-PSQPQAQVQA 171
           L+    +  +   +L D G++I+Q LKD+  RI+ LK+ + PS     V A
Sbjct: 121 LSGKTLVSSIEKTELRDFGYVIEQQLKDVNRRIEILKRNNEPSSALVPVAA 171

[Close]

BLAST of PI0013408 vs. TAIR 10
Match: AT1G65300.1 (AGAMOUS-like 38 )

HSP 1 Score: 141.0 bits (354), Expect = 1.1e-33
Identity = 77/174 (44.25%), Postives = 116/174 (66.67%), Query Frame = 0


Query: 3   RKKVKLAYIVNDSARKATYKKRKRGLMKKVSELSTLCGIEACAIIFSPYDSQPELWPSPI 62
           ++K+KL+ I N  +RK T+ KRK+G+ KK++EL TLCG+EACA+++SP++S PE WPS  
Sbjct: 2   KRKMKLSLIENSVSRKTTFTKRKKGMTKKLTELVTLCGVEACAVVYSPFNSIPEAWPSRE 61

Query: 63  GVQRVLSQFKKMPEMEQSKKMVNQETFLRQRIAKANEQLKKMRKDNREKEITRLMFQSLT 122
           GV+ V+S+F ++  ++++KKMV+QETF+ QRIAK  EQL+K+R +N   +I  LMF  L 
Sbjct: 62  GVEDVVSKFMELSVLDRTKKMVDQETFISQRIAKEKEQLQKLRDENHNSQIRELMFGCLK 121

Query: 123 AAKGLHGLNMLDLNDLGWLIDQNLKDITIRIDSLKKPSPSQPQAQVQAQAQAQA 177
               ++ L+  DL DL   ID+ L  +T RI+ L +   S     +   A A A
Sbjct: 122 GETNVYNLDGRDLQDLSLYIDKYLNGLTRRIEILIENGESSSSLPLPIVANAAA 175

[Close]

BLAST of PI0013408 vs. TAIR 10
Match: AT1G65330.1 (MADS-box transcription factor family protein )

HSP 1 Score: 140.6 bits (353), Expect = 1.5e-33
Identity = 76/160 (47.50%), Postives = 111/160 (69.38%), Query Frame = 0


Query: 3   RKKVKLAYIVNDSARKATYKKRKRGLMKKVSELSTLCGIEACAIIFSPYDSQPELWPSPI 62
           R K+KL++I NDS RK T+ KRK+G++KK +EL TLCG++ACA+I SPY+S  E WPS  
Sbjct: 2   RGKMKLSFIENDSVRKTTFTKRKKGMLKKFNELVTLCGVDACAVIRSPYNSIQEPWPSRE 61

Query: 63  GVQRVLSQFKKMPEMEQSKKMVNQETFLRQRIAKANEQLKKMRKDNREKEITRLMFQSLT 122
           GV+ V+S+F +   ++++KKMV+QETFLRQRIAK  E+L+K+R +NR  +I  LMF  L 
Sbjct: 62  GVEEVMSKFMEFSVLDRTKKMVDQETFLRQRIAKETERLQKLRDENRNSQIRDLMFGCLK 121

Query: 123 AAKGLHGLNMLDLNDLGWLIDQNLKDITIRIDSLKKPSPS 163
               +  L+  DL DL   +++ L  +  R++ LK+   S
Sbjct: 122 GEVDVSHLHGRDLLDLNVFLNKYLNGVIRRVEILKENGES 161

[Close]

BLAST of PI0013408 vs. TAIR 10
Match: AT3G05860.1 (MADS-box transcription factor family protein )

HSP 1 Score: 138.7 bits (348), Expect = 5.7e-33
Identity = 78/151 (51.66%), Postives = 105/151 (69.54%), Query Frame = 0


Query: 1   MTRKKVKLAYIVNDSARKATYKKRKRGLMKKVSELSTLCGIEACAIIFSPYDSQPELWPS 60
           MTRKK+ L+YI N+S RKAT+ KRK+GL+KK+ ELS LCGIEACA+I+SP++S PE+WPS
Sbjct: 1   MTRKKLNLSYITNESMRKATFNKRKKGLVKKIHELSVLCGIEACAVIYSPFNSNPEVWPS 60

Query: 61  PIGVQRVLSQFKKMPEMEQSKKMVNQETFLRQRIAKANEQLKKMRKDNREKEITRLMFQS 120
              V+ V+  F+ + ++EQ KKMV+ E F+RQ I+K  E   K   DN E+ +   MFQ 
Sbjct: 61  NSEVKNVMENFEMLTKLEQEKKMVSHEGFIRQNISKTMESNNKKMIDNAERTMKEAMFQ- 120

Query: 121 LTAAKGLHGLNMLDLN--DLGWLIDQNLKDI 150
           L + KG   LN+ D N  DL   IDQ LK++
Sbjct: 121 LLSGKG-EKLNLTDRNREDLCKYIDQYLKEL 149

The following BLAST results are available for this feature:

BLAST of PI0013408 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FJK3	1.7e-50	59.12	Agamous-like MADS-box protein AGL80 OS=Arabidopsis thaliana OX=3702 GN=AGL80 PE=...	[more]
Q7XJK8	1.6e-32	44.25	MADS-box transcription factor PHERES 2 OS=Arabidopsis thaliana OX=3702 GN=PHE2 P...	[more]
O80805	2.1e-32	47.50	MADS-box transcription factor PHERES 1 OS=Arabidopsis thaliana OX=3702 GN=PHE1 P...	[more]
Q7XJK6	3.3e-30	44.65	Agamous-like MADS-box protein AGL36 OS=Arabidopsis thaliana OX=3702 GN=AGL36 PE=...	[more]
Q7XJK5	2.2e-29	43.40	Agamous-like MADS-box protein AGL90 OS=Arabidopsis thaliana OX=3702 GN=AGL90 PE=...	[more]

BLAST of PI0013408 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LVS3	3.8e-101	91.11	MADS-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G560740 PE...	[more]
A0A5A7U988	6.4e-101	89.69	Agamous-like MADS-box protein AGL80 OS=Cucumis melo var. makuwa OX=1194695 GN=E5...	[more]
A0A1S3BPF2	6.4e-101	89.69	agamous-like MADS-box protein AGL80 OS=Cucumis melo OX=3656 GN=LOC103492094 PE=4...	[more]
A0A6J1HW01	8.4e-93	84.23	agamous-like MADS-box protein AGL80 OS=Cucurbita maxima OX=3661 GN=LOC111467976 ...	[more]
A0A6J1HBW4	4.2e-92	83.78	agamous-like MADS-box protein AGL80 OS=Cucurbita moschata OX=3662 GN=LOC11146203...	[more]

BLAST of PI0013408 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004135760.1	7.8e-101	91.11	agamous-like MADS-box protein AGL80 [Cucumis sativus] >KGN65990.1 hypothetical p...	[more]
XP_008450513.1	1.3e-100	89.69	PREDICTED: agamous-like MADS-box protein AGL80 [Cucumis melo] >KAA0050967.1 agam...	[more]
XP_022968841.1	1.7e-92	84.23	agamous-like MADS-box protein AGL80 [Cucurbita maxima]	[more]
XP_023538956.1	5.1e-92	82.59	agamous-like MADS-box protein AGL80 [Cucurbita pepo subsp. pepo]	[more]
XP_022961458.1	8.6e-92	83.78	agamous-like MADS-box protein AGL80 [Cucurbita moschata] >KAG6590517.1 Agamous-l...	[more]

BLAST of PI0013408 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G48670.1	1.2e-51	59.12	AGAMOUS-like 80	[more]
AT5G26630.1	5.8e-38	47.95	MADS-box transcription factor family protein	[more]
AT1G65300.1	1.1e-33	44.25	AGAMOUS-like 38	[more]
AT1G65330.1	1.5e-33	47.50	MADS-box transcription factor family protein	[more]
AT3G05860.1	5.7e-33	51.66	MADS-box transcription factor family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 87..114
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 157..191
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 157..186
None	No IPR available	PANTHER	PTHR48019:SF17	AGAMOUS-LIKE MADS-BOX PROTEIN AGL80	coord: 1..190
None	No IPR available	PANTHER	PTHR48019	SERUM RESPONSE FACTOR HOMOLOG	coord: 1..190
IPR002100	Transcription factor, MADS-box	PRINTS	PR00404	MADSDOMAIN	coord: 3..23 score: 36.0 coord: 38..59 score: 29.53 coord: 23..38 score: 62.47
IPR002100	Transcription factor, MADS-box	SMART	SM00432	madsneu2	coord: 1..60 e-value: 2.0E-24 score: 97.2
IPR002100	Transcription factor, MADS-box	PFAM	PF00319	SRF-TF	coord: 11..51 e-value: 1.3E-17 score: 63.1
IPR002100	Transcription factor, MADS-box	PROSITE	PS50066	MADS_BOX_2	coord: 1..49 score: 17.058329
IPR036879	Transcription factor, MADS-box superfamily	GENE3D	3.40.1810.10		coord: 13..115 e-value: 9.6E-20 score: 72.5
IPR036879	Transcription factor, MADS-box superfamily	SUPERFAMILY	55455	SRF-like	coord: 2..95
IPR033897	MADS SRF-like	CDD	cd00266	MADS_SRF_like	coord: 2..85 e-value: 1.13892E-33 score: 113.894

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0013408.1	PI0013408.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045944	positive regulation of transcription by RNA polymerase II
cellular_component	GO:0005634	nucleus
molecular_function	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific
molecular_function	GO:0046983	protein dimerization activity
molecular_function	GO:0000978	RNA polymerase II cis-regulatory region sequence-specific DNA binding
molecular_function	GO:0000987	cis-regulatory region sequence-specific DNA binding
molecular_function	GO:0003677	DNA binding