PI0013389 (gene) Melon (PI 482460) v1

Overview
NamePI0013389
Typegene
OrganismCucumis metuliferus (Melon (PI 482460) v1)
DescriptionUnknown protein
Locationchr06: 30715408 .. 30715746 (-)
RNA-Seq ExpressionPI0013389
SyntenyPI0013389
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGAATGTGTTCGTCTTGCTACAACAGTGGATTGGGATTTGGAGCCGACCAGCTTTTCATGGTCGGTCACCGGAAGTTAGAAATCAGAATGGATTTGAAATTGTGACTGAAAAGGGAAGGGGCAGCTGAAGAAGCAAGGGGGGATGATGATGATGATGATGATGTTGATGGAGAATGAAGAAATCAATGAAATGTTTAGTGACAAAAAGCCCTAAAACCATAAAAATAAAGCTATCCTTTCACGATATGGAACGCGGCAATGCCATCGAACTGTGAAAATTCATCGGACGATGGCGGGGTGTTGGACGGACTACTGAGTAACGCCAACACCCATTGA

mRNA sequence

ATGGGAATGTGTTCGTCTTGCTACAACAGTGGATTGGGATTTGGAGCCGACCAGCTTTTCATGGTCGGTCACCGGAACTATCCTTTCACGATATGGAACGCGGCAATGCCATCGAACTGTGAAAATTCATCGGACGATGGCGGGGTGTTGGACGGACTACTGAGTAACGCCAACACCCATTGA

Coding sequence (CDS)

ATGGGAATGTGTTCGTCTTGCTACAACAGTGGATTGGGATTTGGAGCCGACCAGCTTTTCATGGTCGGTCACCGGAACTATCCTTTCACGATATGGAACGCGGCAATGCCATCGAACTGTGAAAATTCATCGGACGATGGCGGGGTGTTGGACGGACTACTGAGTAACGCCAACACCCATTGA

Protein sequence

MGMCSSCYNSGLGFGADQLFMVGHRNYPFTIWNAAMPSNCENSSDDGGVLDGLLSNANTH
Homology
[Close]
BLAST of PI0013389 vs. ExPASy TrEMBL
Match: A0A0A0L634 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G001780 PE=4 SV=1)

HSP 1 Score: 105.1 bits (261), Expect = 1.0e-19
Identity = 51/60 (85.00%), Postives = 53/60 (88.33%), Query Frame = 0 

Query: 1  MGMCSSCYNSGLGFGADQLFMVGHRNYPFTIWNAAMPSNCENSSDDGGVLDGLLSNANTH 60
          MGM SSCYN+GL  GADQLFMVGHR+ PFT W AA PSNCENSSDDGGVLDGLLSNANTH
Sbjct: 1  MGMGSSCYNNGL--GADQLFMVGHRSNPFTKWKAATPSNCENSSDDGGVLDGLLSNANTH 58

[Close]
BLAST of PI0013389 vs. NCBI nr
Match: KGN55606.1 (hypothetical protein Csa_010117 [Cucumis sativus])

HSP 1 Score: 105.1 bits (261), Expect = 2.1e-19
Identity = 51/60 (85.00%), Postives = 53/60 (88.33%), Query Frame = 0 

Query: 1  MGMCSSCYNSGLGFGADQLFMVGHRNYPFTIWNAAMPSNCENSSDDGGVLDGLLSNANTH 60
          MGM SSCYN+GL  GADQLFMVGHR+ PFT W AA PSNCENSSDDGGVLDGLLSNANTH
Sbjct: 1  MGMGSSCYNNGL--GADQLFMVGHRSNPFTKWKAATPSNCENSSDDGGVLDGLLSNANTH 58

The following BLAST results are available for this feature:
BLAST of PI0013389 vs.
Match NameE-valueIdentityDescription
BLAST of PI0013389 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L6341.0e-1985.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G001780 PE=4 SV=1[more]
BLAST of PI0013389 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN55606.12.1e-1985.00hypothetical protein Csa_010117 [Cucumis sativus][more]
BLAST of PI0013389 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
PI0013389.1PI0013389.1mRNA