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Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: five_prime_UTRexonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. CGCTAGAAACAAGATGAGACTAATTCAAAGGCACATAGGAACGGTTGCGTCCGGACTCTAGCTTTTTCCAGTTTTCTTCTCCCCGCAGATTGAAGCCAACCAAACGGATCTGAGAAATAGCTTCCGAAACGACATTTCCTGACCATAAGAAAAGTGATCGAACTGAGAAGCCATGAAAACACAAGAATCGAGTGTTGAAGTAAAATCAGAGCAGGAAATTATATCAAGGATGCATAGTAAGTATGAATATAAGTTGAGAAGCACGAAGATGGAGGTCGATGAAGATTGAAGAAGAAGAAAAATCAGAGAAAGAAATCCAAGAGAAAGAATGGATCAAAACCTGAAGAGGAGAATGGATTGTATGTGATGCCTCACGCGAGGAGACCAAAAACGATTGTACCAGGCTACGAAGAGGCAGAGCAATTTGATGTTTGA mRNA sequence CGCTAGAAACAAGATGAGACTAATTCAAAGGCACATAGGAACGGTTGCGTCCGGACTCTAGCTTTTTCCAGTTTTCTTCTCCCCGCAGATTGAAGCCAACCAAACGGATCTGAGAAATAGCTTCCGAAACGACATTTCCTGACCATAAGAAAAGTGATCGAACTGAGAAGCCATGAAAACACAAGAATCGAGTGTTGAAGTAAAATCAGAGCAGGAAATTATATCAAGGATGCATAGTAAATTGAAGAAGAAGAAAAATCAGAGAAAGAAATCCAAGAGAAAGAATGGATCAAAACCTGAAGAGGAGAATGGATTGTATGTGATGCCTCACGCGAGGAGACCAAAAACGATTGTACCAGGCTACGAAGAGGCAGAGCAATTTGATGTTTGA Coding sequence (CDS) ATGAAAACACAAGAATCGAGTGTTGAAGTAAAATCAGAGCAGGAAATTATATCAAGGATGCATAGTAAATTGAAGAAGAAGAAAAATCAGAGAAAGAAATCCAAGAGAAAGAATGGATCAAAACCTGAAGAGGAGAATGGATTGTATGTGATGCCTCACGCGAGGAGACCAAAAACGATTGTACCAGGCTACGAAGAGGCAGAGCAATTTGATGTTTGA Protein sequence MKTQESSVEVKSEQEIISRMHSKLKKKKNQRKKSKRKNGSKPEEENGLYVMPHARRPKTIVPGYEEAEQFDV
Homology
BLAST of PI0013321 vs. ExPASy TrEMBL
Match: A0A0A0LE35 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G893300 PE=4 SV=1) HSP 1 Score: 113.2 bits (282), Expect = 4.4e-22 Identity = 63/73 (86.30%), Postives = 66/73 (90.41%), Query Frame = 0 Query: 1 MKTQESSVEVKSEQEIISRMHSKLK-KKKNQRKKSKRKNGSKPEEENGLYVMPHARRPKT 60 MKT ESS EVKSEQEIIS+M SKLK KK+QRK S RKNGSKPEEENGLYVMPHARRPKT Sbjct: 16 MKTPESSTEVKSEQEIISKMRSKLKTTKKHQRKSSMRKNGSKPEEENGLYVMPHARRPKT 75
Query: 61 IVPGYEEAEQFDV 73 +VPGYEEAEQFDV Sbjct: 76 VVPGYEEAEQFDV 88
BLAST of PI0013321 vs. NCBI nr
Match: KGN60280.1 (hypothetical protein Csa_001917 [Cucumis sativus]) HSP 1 Score: 113.2 bits (282), Expect = 9.2e-22 Identity = 63/73 (86.30%), Postives = 66/73 (90.41%), Query Frame = 0 Query: 1 MKTQESSVEVKSEQEIISRMHSKLK-KKKNQRKKSKRKNGSKPEEENGLYVMPHARRPKT 60 MKT ESS EVKSEQEIIS+M SKLK KK+QRK S RKNGSKPEEENGLYVMPHARRPKT Sbjct: 16 MKTPESSTEVKSEQEIISKMRSKLKTTKKHQRKSSMRKNGSKPEEENGLYVMPHARRPKT 75
Query: 61 IVPGYEEAEQFDV 73 +VPGYEEAEQFDV Sbjct: 76 VVPGYEEAEQFDV 88
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A0A0LE35 | 4.4e-22 | 86.30 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G893300 PE=4 SV=1 | [more] |
Match Name | E-value | Identity | Description | |
KGN60280.1 | 9.2e-22 | 86.30 | hypothetical protein Csa_001917 [Cucumis sativus] | [more] |
Match Name | E-value | Identity | Description | |
InterPro
Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25
IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
None | No IPR available | COILS | Coil | Coil | coord: 17..37 |
None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 1..72 |
None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 37..51 |
None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 1..20 |
None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 21..36 |
Relationships
The following mRNA feature(s) are a part of this gene:
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