PI0013109 (gene) Melon (PI 482460) v1

Overview


Name	PI0013109
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	patellin-1-like
Location	chr11: 20123851 .. 20125059 (-)
RNA-Seq Expression	PI0013109
Synteny	PI0013109

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTTTATTATTATTATTTATTTGGATCCCACATTAAAAAAAAAAAAAAACTAATTACAAATCTCAAATCATCTTTTACAAACTGCCACTCCATTCTCTCTTCTCTGTCCTATAAAATCCACTCTGCTTCATCATTCTTCCAACCCATCCTTTCGTTCTCTTCTTCAATTCCTTCTCCTTTTCCACTAGGATTTTAGCATGGCTACTGCTGAGGTAAATTTGGCTTCCGATAATTAAGCATAAAGTTTCTTTCCTTTTTTTTTTTTTTTTTTTTATAATTAATCATAATTCAAAATCATATAACTACGTTTCTCGATACATTTGAACTTCTTTTATATATGGGTATGTGAAATTCTTTTGAAATATTTTGAACAAATTTGGAACTGAGTCATTGTTCTTTGCAGGTTGTAACACCGGAGACAGCTCTCCCAGAGGAAGCAACAGAGGTGGTGGAGGTGGAGGTACCACCGCCCAAGGTTGAAGAAGAAGAAGCTCCGCGTCCGGTGGAAGCAGATCCGCCAGCGGAGGAGGTGGCAAAAGAAGAAGACGTCACGGATCCACCAGCGCTGGAAGAGACAGAAACTCCGGTTGAAGTTGAAACCAAGGAAGTAGTAGTAGAAGAAGAGGCAAAGGAAGAGAAGAATGAAGAAGAAGTAGTAGAAGAAGAGGCAAAGGAAGAGAAGAATGAAGAAGAAGTAGTAGAAGAAGAGGCAAAGGAAGAGAAGAAAACAGAAGAGGCAGCTGAGGGTGTGGTGGAGGAGGAGACGAAAGCATCGGAGGCCGAGACACCGGTGGAGGTAGAGGAGGAGAAGGCTGTGGAAGTGGAAGAGAAGCCTGTAGAAGAAAAAGAAGAGAAGCCAGAAGAAGAGGTTGAAGCAGAGAAGGATGAGTAATTAAAATTTGAATACATATTATTCAGTGTAATGAAAAAAGTGAATGGAGGGACGTGGTTTGAAAAATTTGGTGACTTCAAATTGTAGAGAGTTTTGCTTTGTGTAATGTGAAAAGTGGTTGATTGAATGGGGATTGAGAAGGAGTGTAAGAATCTATAAAAGGAGTATAGGGATTAGGGAACTTTGTATTTCTGTTTCTTCGATGTGATCTGTTCACAGTTGCAATTTTTTTTTTTTTTTTGCTAGTTTGTTTGTTATAATAACTTACAAGTTATAATATATATATGTTTCTTTTTTTTTATATATATATAAAAAAA

mRNA sequence

ATTTTATTATTATTATTTATTTGGATCCCACATTAAAAAAAAAAAAAAACTAATTACAAATCTCAAATCATCTTTTACAAACTGCCACTCCATTCTCTCTTCTCTGTCCTATAAAATCCACTCTGCTTCATCATTCTTCCAACCCATCCTTTCGTTCTCTTCTTCAATTCCTTCTCCTTTTCCACTAGGATTTTAGCATGGCTACTGCTGAGGTTGTAACACCGGAGACAGCTCTCCCAGAGGAAGCAACAGAGGTGGTGGAGGTGGAGGTACCACCGCCCAAGGTTGAAGAAGAAGAAGCTCCGCGTCCGGTGGAAGCAGATCCGCCAGCGGAGGAGGTGGCAAAAGAAGAAGACGTCACGGATCCACCAGCGCTGGAAGAGACAGAAACTCCGGTTGAAGTTGAAACCAAGGAAGTAGTAGTAGAAGAAGAGGCAAAGGAAGAGAAGAATGAAGAAGAAGTAGTAGAAGAAGAGGCAAAGGAAGAGAAGAATGAAGAAGAAGTAGTAGAAGAAGAGGCAAAGGAAGAGAAGAAAACAGAAGAGGCAGCTGAGGGTGTGGTGGAGGAGGAGACGAAAGCATCGGAGGCCGAGACACCGGTGGAGGTAGAGGAGGAGAAGGCTGTGGAAGTGGAAGAGAAGCCTGTAGAAGAAAAAGAAGAGAAGCCAGAAGAAGAGGTTGAAGCAGAGAAGGATGAGTAATTAAAATTTGAATACATATTATTCAGTGTAATGAAAAAAGTGAATGGAGGGACGTGGTTTGAAAAATTTGGTGACTTCAAATTGTAGAGAGTTTTGCTTTGTGTAATGTGAAAAGTGGTTGATTGAATGGGGATTGAGAAGGAGTGTAAGAATCTATAAAAGGAGTATAGGGATTAGGGAACTTTGTATTTCTGTTTCTTCGATGTGATCTGTTCACAGTTGCAATTTTTTTTTTTTTTTTGCTAGTTTGTTTGTTATAATAACTTACAAGTTATAATATATATATGTTTCTTTTTTTTTATATATATATAAAAAAA

Coding sequence (CDS)

ATGGCTACTGCTGAGGTTGTAACACCGGAGACAGCTCTCCCAGAGGAAGCAACAGAGGTGGTGGAGGTGGAGGTACCACCGCCCAAGGTTGAAGAAGAAGAAGCTCCGCGTCCGGTGGAAGCAGATCCGCCAGCGGAGGAGGTGGCAAAAGAAGAAGACGTCACGGATCCACCAGCGCTGGAAGAGACAGAAACTCCGGTTGAAGTTGAAACCAAGGAAGTAGTAGTAGAAGAAGAGGCAAAGGAAGAGAAGAATGAAGAAGAAGTAGTAGAAGAAGAGGCAAAGGAAGAGAAGAATGAAGAAGAAGTAGTAGAAGAAGAGGCAAAGGAAGAGAAGAAAACAGAAGAGGCAGCTGAGGGTGTGGTGGAGGAGGAGACGAAAGCATCGGAGGCCGAGACACCGGTGGAGGTAGAGGAGGAGAAGGCTGTGGAAGTGGAAGAGAAGCCTGTAGAAGAAAAAGAAGAGAAGCCAGAAGAAGAGGTTGAAGCAGAGAAGGATGAGTAA

Protein sequence

MATAEVVTPETALPEEATEVVEVEVPPPKVEEEEAPRPVEADPPAEEVAKEEDVTDPPALEETETPVEVETKEVVVEEEAKEEKNEEEVVEEEAKEEKNEEEVVEEEAKEEKKTEEAAEGVVEEETKASEAETPVEVEEEKAVEVEEKPVEEKEEKPEEEVEAEKDE

Homology

[Close]

BLAST of PI0013109 vs. ExPASy TrEMBL
Match: A0A5A7UC23 (Patellin-1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold102G001030 PE=4 SV=1)

HSP 1 Score: 181.0 bits (458), Expect = 4.0e-42
Identity = 141/169 (83.43%), Postives = 144/169 (85.21%), Query Frame = 0


Query: 1   MATAEVVTPETALPEEATEVVEVEVPPPKVEEEEAPRPVEADPPAEEVAKEEDVTDPPAL 60
           MATAEVVTP+TA+PEEATEVVEVEVP PKVEEEEAP PVEADPPAEEVAKEEDVTDPPAL
Sbjct: 1   MATAEVVTPDTAVPEEATEVVEVEVPAPKVEEEEAPPPVEADPPAEEVAKEEDVTDPPAL 60

Query: 61  EETETPVEVETKEVVVEEEAKEEKNEEEVVEEEAKEEKNEEEVVEEEAKEEKKTEEAAEG 120
           EETETPVE ETKEV              VVEEE+KEEKNEEEVVEEE KEEKKTEEAAEG
Sbjct: 61  EETETPVEFETKEV--------------VVEEESKEEKNEEEVVEEEEKEEKKTEEAAEG 120

Query: 121 VVEEETKASEAETPV-EVEEEKAVE-VEEKPVEEKEEKPEEEVEAEKDE 168
            V EETKASEAETPV E EEEKAVE VEEKPVEE EEKPEEEVEAEK E
Sbjct: 121 AVLEETKASEAETPVEEEEEEKAVEVVEEKPVEETEEKPEEEVEAEKAE 155

[Close]

BLAST of PI0013109 vs. ExPASy TrEMBL
Match: A0A1S3C239 (patellin-1-like OS=Cucumis melo OX=3656 GN=LOC103496027 PE=4 SV=1)

HSP 1 Score: 181.0 bits (458), Expect = 4.0e-42
Identity = 141/169 (83.43%), Postives = 144/169 (85.21%), Query Frame = 0


Query: 1   MATAEVVTPETALPEEATEVVEVEVPPPKVEEEEAPRPVEADPPAEEVAKEEDVTDPPAL 60
           MATAEVVTP+TA+PEEATEVVEVEVP PKVEEEEAP PVEADPPAEEVAKEEDVTDPPAL
Sbjct: 1   MATAEVVTPDTAVPEEATEVVEVEVPAPKVEEEEAPPPVEADPPAEEVAKEEDVTDPPAL 60

Query: 61  EETETPVEVETKEVVVEEEAKEEKNEEEVVEEEAKEEKNEEEVVEEEAKEEKKTEEAAEG 120
           EETETPVE ETKEV              VVEEE+KEEKNEEEVVEEE KEEKKTEEAAEG
Sbjct: 61  EETETPVEFETKEV--------------VVEEESKEEKNEEEVVEEEEKEEKKTEEAAEG 120

Query: 121 VVEEETKASEAETPV-EVEEEKAVE-VEEKPVEEKEEKPEEEVEAEKDE 168
            V EETKASEAETPV E EEEKAVE VEEKPVEE EEKPEEEVEAEK E
Sbjct: 121 AVLEETKASEAETPVEEEEEEKAVEVVEEKPVEETEEKPEEEVEAEKAE 155

[Close]

BLAST of PI0013109 vs. ExPASy TrEMBL
Match: A0A0A0KAS3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G109780 PE=4 SV=1)

HSP 1 Score: 166.0 bits (419), Expect = 1.3e-37
Identity = 133/167 (79.64%), Postives = 134/167 (80.24%), Query Frame = 0


Query: 1   MATAEVVTPETALPEEATEVVEVEVPPPKVEEEEAPRPVEADPPAEEVAKEEDVTDPPAL 60
           MATAEVVTPETALPEEATEVVEVEVPPPKVEEEEAP PVE DPPAEEVAKEEDVTDPPA+
Sbjct: 1   MATAEVVTPETALPEEATEVVEVEVPPPKVEEEEAPPPVEEDPPAEEVAKEEDVTDPPAV 60

Query: 61  EETETPVEVETKEVVVEEEAKEEKNEEEVVEEEAKEEKNEEEVVEEEAKEEKKTEEAAEG 120
           EE ETPVEVETKEVVVEEEAKEEKNE             EEEVVEEE KEE KTEEAAE 
Sbjct: 61  EEAETPVEVETKEVVVEEEAKEEKNE-------------EEEVVEEEEKEENKTEEAAEV 120

Query: 121 VVEEETKASEAETPVEVEEEKAVEVEEKPVEEKEEKPEEEVEAEKDE 168
           VVEEETKA     PVE  EEKAVEV  KP EE EEK EEEV AEK E
Sbjct: 121 VVEEETKA-----PVEEAEEKAVEV--KPAEEAEEKAEEEVGAEKVE 147

[Close]

BLAST of PI0013109 vs. ExPASy TrEMBL
Match: A0A6J1I4V1 (fibrous sheath CABYR-binding protein-like OS=Cucurbita maxima OX=3661 GN=LOC111469887 PE=4 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 2.1e-06
Identity = 93/171 (54.39%), Postives = 103/171 (60.23%), Query Frame = 0


Query: 1   MATAEVVTPETALPEEATEVVEVEVPPPKVEEEEAPRPVEADPPAEEVAKEEDVTDPPAL 60
           MATAEVVT E AL EE T   EVEVPP KVEEE    P  ADPPAEEVAKEE      A 
Sbjct: 1   MATAEVVTQEPALQEEVT---EVEVPPLKVEEE---APAAADPPAEEVAKEE------AA 60

Query: 61  EETETPVEVETKEVVVEEEAKEEKNEEEVVEEEAKEEKNEEEVVEEEAKEEKKTEEAAEG 120
           E  E PVEVETKEVV +E       EEE  +EE  EEK E E  E EA+E+++    +E 
Sbjct: 61  EVAEPPVEVETKEVVAKE-------EEEEAKEEVVEEKKEVEAAEVEAEEKEEAPAESEP 120

Query: 121 VVEEETKASEAETPVEVE---EEKAVEVEEKPVEEKEEKP-EEEVEAEKDE 168
            V EE +  E E   E E   EE+A EV+E   EE EEKP EEE  AEK E
Sbjct: 121 AVAEEEEEEEEEAKPEAEPAAEEEAAEVKETGAEEAEEKPAEEEPAAEKAE 152

[Close]

BLAST of PI0013109 vs. NCBI nr
Match: XP_008455963.1 (PREDICTED: patellin-1-like [Cucumis melo])

HSP 1 Score: 181.0 bits (458), Expect = 8.3e-42
Identity = 141/169 (83.43%), Postives = 144/169 (85.21%), Query Frame = 0


Query: 1   MATAEVVTPETALPEEATEVVEVEVPPPKVEEEEAPRPVEADPPAEEVAKEEDVTDPPAL 60
           MATAEVVTP+TA+PEEATEVVEVEVP PKVEEEEAP PVEADPPAEEVAKEEDVTDPPAL
Sbjct: 1   MATAEVVTPDTAVPEEATEVVEVEVPAPKVEEEEAPPPVEADPPAEEVAKEEDVTDPPAL 60

Query: 61  EETETPVEVETKEVVVEEEAKEEKNEEEVVEEEAKEEKNEEEVVEEEAKEEKKTEEAAEG 120
           EETETPVE ETKEV              VVEEE+KEEKNEEEVVEEE KEEKKTEEAAEG
Sbjct: 61  EETETPVEFETKEV--------------VVEEESKEEKNEEEVVEEEEKEEKKTEEAAEG 120

Query: 121 VVEEETKASEAETPV-EVEEEKAVE-VEEKPVEEKEEKPEEEVEAEKDE 168
            V EETKASEAETPV E EEEKAVE VEEKPVEE EEKPEEEVEAEK E
Sbjct: 121 AVLEETKASEAETPVEEEEEEKAVEVVEEKPVEETEEKPEEEVEAEKAE 155

[Close]

BLAST of PI0013109 vs. NCBI nr
Match: KAA0053292.1 (patellin-1-like [Cucumis melo var. makuwa])

HSP 1 Score: 181.0 bits (458), Expect = 8.3e-42
Identity = 141/169 (83.43%), Postives = 144/169 (85.21%), Query Frame = 0


Query: 1   MATAEVVTPETALPEEATEVVEVEVPPPKVEEEEAPRPVEADPPAEEVAKEEDVTDPPAL 60
           MATAEVVTP+TA+PEEATEVVEVEVP PKVEEEEAP PVEADPPAEEVAKEEDVTDPPAL
Sbjct: 1   MATAEVVTPDTAVPEEATEVVEVEVPAPKVEEEEAPPPVEADPPAEEVAKEEDVTDPPAL 60

Query: 61  EETETPVEVETKEVVVEEEAKEEKNEEEVVEEEAKEEKNEEEVVEEEAKEEKKTEEAAEG 120
           EETETPVE ETKEV              VVEEE+KEEKNEEEVVEEE KEEKKTEEAAEG
Sbjct: 61  EETETPVEFETKEV--------------VVEEESKEEKNEEEVVEEEEKEEKKTEEAAEG 120

Query: 121 VVEEETKASEAETPV-EVEEEKAVE-VEEKPVEEKEEKPEEEVEAEKDE 168
            V EETKASEAETPV E EEEKAVE VEEKPVEE EEKPEEEVEAEK E
Sbjct: 121 AVLEETKASEAETPVEEEEEEKAVEVVEEKPVEETEEKPEEEVEAEKAE 155

[Close]

BLAST of PI0013109 vs. NCBI nr
Match: XP_004140479.1 (cilia- and flagella-associated protein 251 [Cucumis sativus] >KGN46583.1 hypothetical protein Csa_004785 [Cucumis sativus])

HSP 1 Score: 166.0 bits (419), Expect = 2.8e-37
Identity = 133/167 (79.64%), Postives = 134/167 (80.24%), Query Frame = 0


Query: 1   MATAEVVTPETALPEEATEVVEVEVPPPKVEEEEAPRPVEADPPAEEVAKEEDVTDPPAL 60
           MATAEVVTPETALPEEATEVVEVEVPPPKVEEEEAP PVE DPPAEEVAKEEDVTDPPA+
Sbjct: 1   MATAEVVTPETALPEEATEVVEVEVPPPKVEEEEAPPPVEEDPPAEEVAKEEDVTDPPAV 60

Query: 61  EETETPVEVETKEVVVEEEAKEEKNEEEVVEEEAKEEKNEEEVVEEEAKEEKKTEEAAEG 120
           EE ETPVEVETKEVVVEEEAKEEKNE             EEEVVEEE KEE KTEEAAE 
Sbjct: 61  EEAETPVEVETKEVVVEEEAKEEKNE-------------EEEVVEEEEKEENKTEEAAEV 120

Query: 121 VVEEETKASEAETPVEVEEEKAVEVEEKPVEEKEEKPEEEVEAEKDE 168
           VVEEETKA     PVE  EEKAVEV  KP EE EEK EEEV AEK E
Sbjct: 121 VVEEETKA-----PVEEAEEKAVEV--KPAEEAEEKAEEEVGAEKVE 147

[Close]

BLAST of PI0013109 vs. NCBI nr
Match: XP_038900947.1 (cytochrome c1-like [Benincasa hispida] >XP_038900949.1 cytochrome c1-like [Benincasa hispida])

HSP 1 Score: 133.7 bits (335), Expect = 1.5e-27
Identity = 114/168 (67.86%), Postives = 119/168 (70.83%), Query Frame = 0


Query: 1   MATAEVVTPETALPEEATEVVEVEVPPPKVEEEEAPRPVEADPPAEEVAKEEDVTDPPAL 60
           MATAEVV PET LPEEATEV  VEVPPPKVEEEEAP P   DPPAEEVAKEE+ TDPPA 
Sbjct: 1   MATAEVVPPETVLPEEATEV--VEVPPPKVEEEEAPPPAAVDPPAEEVAKEEEATDPPAA 60

Query: 61  EETETPVEVETKEVVVEEEAKEEKNEEEVVEEEAKEEKNEEEVVEEEAKEEKKTEEAAEG 120
           EETETPVEVETKEVVVEEE KEEK E                       EE+K EEA E 
Sbjct: 61  EETETPVEVETKEVVVEEEPKEEKKE-----------------------EEEKEEEAGEA 120

Query: 121 VVEEETKASEAETPVEVEEEKAVE-VEEKPVEEKEEKPEEEVEAEKDE 168
           VVEEE+K +EAE P    EE+AVE VEEKPVEE EEKPEEE  AEK E
Sbjct: 121 VVEEESKPAEAEAPA---EEEAVEVVEEKPVEETEEKPEEEPAAEKAE 140

[Close]

BLAST of PI0013109 vs. NCBI nr
Match: XP_022971120.1 (fibrous sheath CABYR-binding protein-like [Cucurbita maxima])

HSP 1 Score: 62.4 bits (150), Expect = 4.3e-06
Identity = 93/171 (54.39%), Postives = 103/171 (60.23%), Query Frame = 0


Query: 1   MATAEVVTPETALPEEATEVVEVEVPPPKVEEEEAPRPVEADPPAEEVAKEEDVTDPPAL 60
           MATAEVVT E AL EE T   EVEVPP KVEEE    P  ADPPAEEVAKEE      A 
Sbjct: 1   MATAEVVTQEPALQEEVT---EVEVPPLKVEEE---APAAADPPAEEVAKEE------AA 60

Query: 61  EETETPVEVETKEVVVEEEAKEEKNEEEVVEEEAKEEKNEEEVVEEEAKEEKKTEEAAEG 120
           E  E PVEVETKEVV +E       EEE  +EE  EEK E E  E EA+E+++    +E 
Sbjct: 61  EVAEPPVEVETKEVVAKE-------EEEEAKEEVVEEKKEVEAAEVEAEEKEEAPAESEP 120

Query: 121 VVEEETKASEAETPVEVE---EEKAVEVEEKPVEEKEEKP-EEEVEAEKDE 168
            V EE +  E E   E E   EE+A EV+E   EE EEKP EEE  AEK E
Sbjct: 121 AVAEEEEEEEEEAKPEAEPAAEEEAAEVKETGAEEAEEKPAEEEPAAEKAE 152

The following BLAST results are available for this feature:

BLAST of PI0013109 vs.


Match Name	E-value	Identity	Description

BLAST of PI0013109 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UC23	4.0e-42	83.43	Patellin-1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold102G0010...	[more]
A0A1S3C239	4.0e-42	83.43	patellin-1-like OS=Cucumis melo OX=3656 GN=LOC103496027 PE=4 SV=1	[more]
A0A0A0KAS3	1.3e-37	79.64	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G109780 PE=4 SV=1	[more]
A0A6J1I4V1	2.1e-06	54.39	fibrous sheath CABYR-binding protein-like OS=Cucurbita maxima OX=3661 GN=LOC1114...	[more]

BLAST of PI0013109 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008455963.1	8.3e-42	83.43	PREDICTED: patellin-1-like [Cucumis melo]	[more]
KAA0053292.1	8.3e-42	83.43	patellin-1-like [Cucumis melo var. makuwa]	[more]
XP_004140479.1	2.8e-37	79.64	cilia- and flagella-associated protein 251 [Cucumis sativus] >KGN46583.1 hypothe...	[more]
XP_038900947.1	1.5e-27	67.86	cytochrome c1-like [Benincasa hispida] >XP_038900949.1 cytochrome c1-like [Benin...	[more]
XP_022971120.1	4.3e-06	54.39	fibrous sheath CABYR-binding protein-like [Cucurbita maxima]	[more]

BLAST of PI0013109 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 73..118
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 80..104
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..167
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 105..155
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 65..79
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 25..56

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0013109.1	PI0013109.1	mRNA