PI0013044 (gene) Melon (PI 482460) v1

Overview


Name	PI0013044
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	zinc finger CCCH domain-containing protein 39-like
Location	chr05: 1131943 .. 1134263 (-)
RNA-Seq Expression	PI0013044
Synteny	PI0013044

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATAAAATTCCATTGTGGCGATTCAGAAGATTCCATGGTTTTGGCCTTCCTCAATTCTCCGATTTTCATTAGGGTTTTTATTTCTCCTTGGCGGCTAGGGTTTTGATTCTTCATTCACTTTGTTGTTTTTTCTTTTCAACCTCTTATTATAAATATATAACTATAACTCTTTCACTTTCGCCATTGTTTTGATTCCTTCTTCCATTGATCTTCATTCCGCTGTTTTTAGATTGATATTTCAAACACCCTTTTGTTTATTTATCCAACTCAACTTTAATTTGCCTACTTTTCTTGTTCTTCATTCCGCTGTTTTTAATTTTCCTACTTTTCTTGTTTTCTTGTTCTCTTGTTTTCTTGTTCTTCTTGCCAATTGTTGGTATAAGGGAGGATGATCACATCGATTGATTGAAATTTTTATTGGGTGGAAACATTGTTCGTTGTTGATTCATTGTTCTGATTGATTAAAGAGAACTGGGTTTTGTTTTAGAAGATGAGTTTCAATGATATGAGAGCCTCTGTTATACCGCCGCCTCTGCATTCTTATGGTTCTAATGGCGATGCGTCTGCTTGCTGGTCTCAGTTTCCTAGGAATGATCCATTTGATCCACAATCACAATTTGAAGTACAACAGCCTCCGTTTAAAAGAGCTAGAAATTCTGAAGAAAACCCATCTAGTCCCATCTCTTATTCAAATCCCCCCTTGAATTCTAGGGGGCACCCACAAAATGCTCCAGTGAATAAAGGAATAAGTAATATCTTTTTCAAGACAAGGATGTGTGCGAAATTTAAGCTTGGTTTGTGTCGAAATGGTGCTAGTTGTAACTTTGCTCATGGTGTTGAAGATATGAGACAACCTCCACCAAATTGGCAAGAAATTGTTGGTATAAAGGAGGATGATCAATCAGTAAATAATTGGAATGATGATCAGAAGATAATTCAGAAAATGAAGCTGTGTAGGAAGTTTTATAATGGAGAGGAATGCCCTTATGGAGATAGGTGTAATTTTCTTCATGAAGATCCTGCTAAGTTTAGAGATGATTCAGGTAGGTTTAGGGAAAGTTCAGCTATAAGTATTGGAACTACAGGAACTCCATTGATGAATGGAAGTGATTCTTCTAGTTATATGGAACCTAGCAGGGCAACTTCTTGTTCTGCTTCTGATGCTCTTCGAACTAATGGAAATGTTAGGCCTTCATTCTGGAAGACAAAGTTATGCACCAAGTGGGAGATTACAGGCCATTGCCCCTTTGGTGATAAGTGCCATTTTGCTCATGGCCAATCTGGTATTCATAGCTCTCTTTCTTCTCTTTTTTGTCTTAATGGTCAAGGAATATAATTCGTTTATCTGAATGGAACACAATAGTTGGCTATAACATGTGAATTAGAATTCCGATTAGCCATTTGATGAACTGAAAATCATGATATGAGTGAATCATTTATTGTTAACATGACGAAATTTTGTTTTATACAATGTAAATTCATGACAATGTCAATCATTTGTTTAGGCCATGTTCGGTAACATGATTTTGTGAATTCTTAGCCAAATTTTTTTAGAAAAGGGGGTTTTAAGAGCTACTTTCTTCGTTTTTTGAACATGTGAAGTAACAAAGCAAGAAATTTAGTGGTGATACGGATGTTAGAAAACCAAAAACCAAATGGTTACTGACAGTAGGTTTAGTATTTATGTTCTGTCCTTCGTGAAGCTTTGAACATTGTGATTAATTATTTACATACTACTTGGAGAGATGCTAACTGATATTAATGAATCAGAGTTACAACTATATATTGGACGTGAGGGGGAAGTATCTACTGCTGCCCTCAATGTAAAGCCTCTAATTGTAGCCATGGAAGCATCTTCGAGTTTGACGACCAGTGTACTTCCATCCTCTGCCTTACCAGAGGGCCAAGCGAAGCCAAGTTTGCTGAAATGGAAAGGACCCAAGAAGATAAATCGGATCTATGCCGATTGGCTCGATGATTTGCCTCTATCTCCAAGCTCAACAAGCAAAATGGAGGGTTGACCCTTTTTTTTCAGCTGAAGTCAGTTTTTGAAGTTGGTTTGCCGAGGATTCAATTGATTAGTTACAATATGGGAGTTGGGTTGGTGGTGGTTTTTCTGAATTAGATGAAAGGAGTGTAAAAAAGTTTTGGTGAGAATTAATTGGGAATATGGATAGAAGAAGAGAGAGTGAGAGATATACCCTATTGTTTGTTCTGTATTGTTCATTTATTTTGTTACTTCATATTTGTTCATATCCCATAGAAAAACTAGTTTGGATTTTTAATGTAATTCAATATATTTGAGCATTTCTTTCTGACAAA

mRNA sequence

ATAAAATTCCATTGTGGCGATTCAGAAGATTCCATGGTTTTGGCCTTCCTCAATTCTCCGATTTTCATTAGGGTTTTTATTTCTCCTTGGCGGCTAGGGTTTTGATTCTTCATTCACTTTGTTGTTTTTTCTTTTCAACCTCTTATTATAAATATATAACTATAACTCTTTCACTTTCGCCATTGTTTTGATTCCTTCTTCCATTGATCTTCATTCCGCTGTTTTTAGATTGATATTTCAAACACCCTTTTGTTTATTTATCCAACTCAACTTTAATTTGCCTACTTTTCTTGTTCTTCATTCCGCTGTTTTTAATTTTCCTACTTTTCTTGTTTTCTTGTTCTCTTGTTTTCTTGTTCTTCTTGCCAATTGTTGGTATAAGGGAGGATGATCACATCGATTGATTGAAATTTTTATTGGGTGGAAACATTGTTCGTTGTTGATTCATTGTTCTGATTGATTAAAGAGAACTGGGTTTTGTTTTAGAAGATGAGTTTCAATGATATGAGAGCCTCTGTTATACCGCCGCCTCTGCATTCTTATGGTTCTAATGGCGATGCGTCTGCTTGCTGGTCTCAGTTTCCTAGGAATGATCCATTTGATCCACAATCACAATTTGAAGTACAACAGCCTCCGTTTAAAAGAGCTAGAAATTCTGAAGAAAACCCATCTAGTCCCATCTCTTATTCAAATCCCCCCTTGAATTCTAGGGGGCACCCACAAAATGCTCCAGTGAATAAAGGAATAAGTAATATCTTTTTCAAGACAAGGATGTGTGCGAAATTTAAGCTTGGTTTGTGTCGAAATGGTGCTAGTTGTAACTTTGCTCATGGTGTTGAAGATATGAGACAACCTCCACCAAATTGGCAAGAAATTGTTGGTATAAAGGAGGATGATCAATCAGTAAATAATTGGAATGATGATCAGAAGATAATTCAGAAAATGAAGCTGTGTAGGAAGTTTTATAATGGAGAGGAATGCCCTTATGGAGATAGGTGTAATTTTCTTCATGAAGATCCTGCTAAGTTTAGAGATGATTCAGGTAGGTTTAGGGAAAGTTCAGCTATAAGTATTGGAACTACAGGAACTCCATTGATGAATGGAAGTGATTCTTCTAGTTATATGGAACCTAGCAGGGCAACTTCTTGTTCTGCTTCTGATGCTCTTCGAACTAATGGAAATGTTAGGCCTTCATTCTGGAAGACAAAGTTATGCACCAAGTGGGAGATTACAGGCCATTGCCCCTTTGGTGATAAGTGCCATTTTGCTCATGGCCAATCTGAGTTACAACTATATATTGGACGTGAGGGGGAAGTATCTACTGCTGCCCTCAATGTAAAGCCTCTAATTGTAGCCATGGAAGCATCTTCGAGTTTGACGACCAGTGTACTTCCATCCTCTGCCTTACCAGAGGGCCAAGCGAAGCCAAGTTTGCTGAAATGGAAAGGACCCAAGAAGATAAATCGGATCTATGCCGATTGGCTCGATGATTTGCCTCTATCTCCAAGCTCAACAAGCAAAATGGAGGGTTGACCCTTTTTTTTCAGCTGAAGTCAGTTTTTGAAGTTGGTTTGCCGAGGATTCAATTGATTAGTTACAATATGGGAGTTGGGTTGGTGGTGGTTTTTCTGAATTAGATGAAAGGAGTGTAAAAAAGTTTTGGTGAGAATTAATTGGGAATATGGATAGAAGAAGAGAGAGTGAGAGATATACCCTATTGTTTGTTCTGTATTGTTCATTTATTTTGTTACTTCATATTTGTTCATATCCCATAGAAAAACTAGTTTGGATTTTTAATGTAATTCAATATATTTGAGCATTTCTTTCTGACAAA

Coding sequence (CDS)

ATGAGTTTCAATGATATGAGAGCCTCTGTTATACCGCCGCCTCTGCATTCTTATGGTTCTAATGGCGATGCGTCTGCTTGCTGGTCTCAGTTTCCTAGGAATGATCCATTTGATCCACAATCACAATTTGAAGTACAACAGCCTCCGTTTAAAAGAGCTAGAAATTCTGAAGAAAACCCATCTAGTCCCATCTCTTATTCAAATCCCCCCTTGAATTCTAGGGGGCACCCACAAAATGCTCCAGTGAATAAAGGAATAAGTAATATCTTTTTCAAGACAAGGATGTGTGCGAAATTTAAGCTTGGTTTGTGTCGAAATGGTGCTAGTTGTAACTTTGCTCATGGTGTTGAAGATATGAGACAACCTCCACCAAATTGGCAAGAAATTGTTGGTATAAAGGAGGATGATCAATCAGTAAATAATTGGAATGATGATCAGAAGATAATTCAGAAAATGAAGCTGTGTAGGAAGTTTTATAATGGAGAGGAATGCCCTTATGGAGATAGGTGTAATTTTCTTCATGAAGATCCTGCTAAGTTTAGAGATGATTCAGGTAGGTTTAGGGAAAGTTCAGCTATAAGTATTGGAACTACAGGAACTCCATTGATGAATGGAAGTGATTCTTCTAGTTATATGGAACCTAGCAGGGCAACTTCTTGTTCTGCTTCTGATGCTCTTCGAACTAATGGAAATGTTAGGCCTTCATTCTGGAAGACAAAGTTATGCACCAAGTGGGAGATTACAGGCCATTGCCCCTTTGGTGATAAGTGCCATTTTGCTCATGGCCAATCTGAGTTACAACTATATATTGGACGTGAGGGGGAAGTATCTACTGCTGCCCTCAATGTAAAGCCTCTAATTGTAGCCATGGAAGCATCTTCGAGTTTGACGACCAGTGTACTTCCATCCTCTGCCTTACCAGAGGGCCAAGCGAAGCCAAGTTTGCTGAAATGGAAAGGACCCAAGAAGATAAATCGGATCTATGCCGATTGGCTCGATGATTTGCCTCTATCTCCAAGCTCAACAAGCAAAATGGAGGGTTGA

Protein sequence

MSFNDMRASVIPPPLHSYGSNGDASACWSQFPRNDPFDPQSQFEVQQPPFKRARNSEENPSSPISYSNPPLNSRGHPQNAPVNKGISNIFFKTRMCAKFKLGLCRNGASCNFAHGVEDMRQPPPNWQEIVGIKEDDQSVNNWNDDQKIIQKMKLCRKFYNGEECPYGDRCNFLHEDPAKFRDDSGRFRESSAISIGTTGTPLMNGSDSSSYMEPSRATSCSASDALRTNGNVRPSFWKTKLCTKWEITGHCPFGDKCHFAHGQSELQLYIGREGEVSTAALNVKPLIVAMEASSSLTTSVLPSSALPEGQAKPSLLKWKGPKKINRIYADWLDDLPLSPSSTSKMEG

Homology

[Close]

BLAST of PI0013044 vs. ExPASy Swiss-Prot
Match: Q9LT81 (Zinc finger CCCH domain-containing protein 39 OS=Arabidopsis thaliana OX=3702 GN=At3g19360 PE=2 SV=1)

HSP 1 Score: 295.4 bits (755), Expect = 8.2e-79
Identity = 169/340 (49.71%), Postives = 208/340 (61.18%), Query Frame = 0


Query: 40  QSQFEVQ-QPPFKRARNSEENPSSPI------SYSNPPLNSRGHPQNAPVNKGISNIFFK 99
           QSQ   Q QP  KR R  ++N  +P       S SNP +    +P   PVNKG +NIF+K
Sbjct: 49  QSQPSQQLQPALKRPRLVDDNLFNPASSFPQPSSSNPWMVPSLNP--PPVNKGTANIFYK 108

Query: 100 TRMCAKFKLGLCRNGASCNFAHGVEDMRQPPPNWQEIVGIKEDDQS-------------- 159
           TRMCAKF+ G CRNG  CNFAHG+ED+RQPP NWQEIVG     Q               
Sbjct: 109 TRMCAKFRAGTCRNGELCNFAHGIEDLRQPPSNWQEIVGPPPAGQDRERERERERERERP 168

Query: 160 ------VNNWNDDQKIIQKMKLCRKFYNGEECPYGDRCNFLHEDPAKFRDDSGRFRESSA 219
                  NNW DDQKII +MKLCRKF  GEECPYGDRCNF+HED +KFR+DSG+ RESS 
Sbjct: 169 SLAPVVNNNWEDDQKIILRMKLCRKFCFGEECPYGDRCNFIHEDLSKFREDSGKLRESSV 228

Query: 220 ISIGTTGTPLMNGSDSSSYMEPSRATSCSASDALRTNGNVRPSFWKTKLCTKWEITGHCP 279
           IS+G T         +S+ +E +R  S      +   G V+  +WKT+LC K++ITG CP
Sbjct: 229 ISVGATAAD-QPSDTASNLIEVNRQGSIPVPAPMNNGGVVKTVYWKTRLCMKFDITGQCP 288

Query: 280 FGDKCHFAHGQSELQLYIGR-EGEV--STAALNVKPLIVAME--ASSSLTTSVLPSSAL- 339
           FGDKCHFAHGQ+EL   +GR EGE   + A++N + ++ A E  A   +T     SS L 
Sbjct: 289 FGDKCHFAHGQAELHNSVGRVEGEAMNAVASVNKQAVVPANEAFAMKPITQVTADSSGLN 348

Query: 340 PEGQAKPSLLKWKGPKKINRIYADWLDDLPLSPSSTSKME 347
            EG+ K  LLKW   KKINRIY DW+DDLP+   ST  +E
Sbjct: 349 EEGRRKKCLLKWSDSKKINRIYGDWIDDLPVGQKSTKPVE 385

[Close]

BLAST of PI0013044 vs. ExPASy Swiss-Prot
Match: Q84UQ3 (Zinc finger CCCH domain-containing protein 56 OS=Oryza sativa subsp. japonica OX=39947 GN=Os08g0159800 PE=4 SV=1)

HSP 1 Score: 190.7 bits (483), Expect = 2.9e-47
Identity = 107/301 (35.55%), Postives = 154/301 (51.16%), Query Frame = 0


Query: 79  NAPVNKGISNIFFKTRMCAKFKLGLCRNGASCNFAHGVEDMRQPPPNWQEIVGIKEDDQS 138
           N   ++ I  +FFKT++C KF+ G C    +CNFAHG+E++R+PPPNWQEIV   E+   
Sbjct: 76  NTSKSRAIGKMFFKTKLCCKFRAGTCPYVTNCNFAHGMEELRKPPPNWQEIVAAHEEATE 135

Query: 139 VNNWNDDQKIIQ-----------------------KMKLCRKFYNGEECPYGDRCNFLHE 198
               +    +                         K + C+KFY  E CPYGD C FLH 
Sbjct: 136 AREEHQIPIMTSSGPTAGGDAGCGGGGGGGSGRAYKGRHCKKFYTDEGCPYGDACTFLH- 195

Query: 199 DPAKFRDDSGRFRESSAISIGTTGTPLMNGSDSSSYMEPSRATSCSASDALRTNGNVRPS 258
                 D+  + RES AIS+    +P + G         + A + SAS A       +PS
Sbjct: 196 ------DEQSKARESVAISL----SPSVGGGGGGGSYNSAAAAAASASAAAGNGPMQKPS 255

Query: 259 FWKTKLCTKWEITGHCPFGDKCHFAHGQSELQLYIGR----EGEVSTAALNVKPLIVAME 318
            WKT++C KWE+TG+CPFG KCHFAHG +EL  Y G     +   + A  + K  +V+ +
Sbjct: 256 NWKTRICNKWEMTGYCPFGSKCHFAHGAAELHKYGGGLVDIDSRDAAATPDSKQAVVSAK 315

Query: 319 A---SSSLTTSVLPSSAL---------------PEGQAKPSLLKWKGPKKINRIYADWLD 335
           A   +++ +T+VLP + +                 GQ +  + KWKGP KI+RIY DW+D
Sbjct: 316 APAETAAASTTVLPHADVYHLGVQAQRSTIAGQRSGQVQRPIQKWKGPDKISRIYGDWID 365

[Close]

BLAST of PI0013044 vs. ExPASy Swiss-Prot
Match: Q9LQM3 (Zinc finger CCCH domain-containing protein 12 OS=Arabidopsis thaliana OX=3702 GN=At1g32360 PE=2 SV=1)

HSP 1 Score: 181.0 bits (458), Expect = 2.3e-44
Identity = 130/390 (33.33%), Postives = 179/390 (45.90%), Query Frame = 0


Query: 12  PPPLHSYGSNGDASA---------CWSQFPRNDPFDPQSQFEVQQPPFKRARNSEENPSS 71
           PPP + + + GD++           W+  P N   D         PP K+ R S   PSS
Sbjct: 21  PPPDNWFPNLGDSAVWATEDDYNRAWAMNPDNTSGDNNG------PPNKKTRGS---PSS 80

Query: 72  PISYSNPPLNSRGHPQNAPVNKGISNIFFKTRMCAKFKLGLCRNGASCNFAHGVEDMRQP 131
             + +    ++R         K I  +FFKT++C KF+ G C    +CNFAH VE++R+P
Sbjct: 81  SSATTTSAASNR--------TKAIGKMFFKTKLCCKFRAGTCPYITNCNFAHTVEELRRP 140

Query: 132 PPNWQEIVGIKEDDQSVNNWNDDQKIIQ----------------------KMKLCRKFYN 191
           PPNWQEIV   E+++S         +++                      K + C+KFY 
Sbjct: 141 PPNWQEIVAAHEEERSGGMGTPTVSVVEIPREEFQIPSLVSSTAESGRSFKGRHCKKFYT 200

Query: 192 GEECPYGDRCNFLHEDPAKFRDDSGRFRESSAISIGTTGTPLMNGSDSSSYMEPSRATSC 251
            E CPYG+ C FLH       D++ R RES AIS+G  G     G  S      S     
Sbjct: 201 EEGCPYGESCTFLH-------DEASRNRESVAISLGPGGYGSGGGGGSGG---GSVGGGG 260

Query: 252 SASDALRTNGN-----------VRPSFWKTKLCTKWEITGHCPFGDKCHFAHGQSELQLY 311
           S+S+ +   G            ++PS WKT++C KWEITG+CPFG KCHFAHG +EL  +
Sbjct: 261 SSSNVVVLGGGGGSGSGSGIQILKPSNWKTRICNKWEITGYCPFGAKCHFAHGAAELHRF 320

Query: 312 -------IGREG-----EVSTAALNVKPLI---------VAMEASSSLTTSVLPSSALPE 336
                   G++G     +      N K L          V   A +S  T V    A   
Sbjct: 321 GGGLVEEEGKDGVSPNPDTKQTVQNPKGLSDTTTLLSPGVPHNADASYHTGVALQRASSA 380

[Close]

BLAST of PI0013044 vs. ExPASy Swiss-Prot
Match: Q5PP65 (Zinc finger CCCH domain-containing protein 28 OS=Arabidopsis thaliana OX=3702 GN=At2g35430 PE=1 SV=1)

HSP 1 Score: 99.0 bits (245), Expect = 1.1e-19
Identity = 68/216 (31.48%), Postives = 96/216 (44.44%), Query Frame = 0


Query: 151 KMKLCRKFYNGEECPY-GDRCNFLHE---------DPAKFRD---DSGRFRESSAISIGT 210
           K KLC KF  G  CPY    C+F H           P  +++   ++ R RES A+S+G 
Sbjct: 73  KTKLCFKFRAG-TCPYSASSCHFAHSAEELRLPPPPPPNWQETVTEASRNRESFAVSLGP 132

Query: 211 TGTPLMNGSDSSSYMEPSRATSCSASDALRTNGNVRPSFWKTKLCTKWEITGHCPFGDKC 270
            G                     + +  L++        WKT++C KW+ TG+CPFG  C
Sbjct: 133 RG---------------------NVAQTLKSPN------WKTRICNKWQTTGYCPFGSHC 192

Query: 271 HFAHGQSELQLYIG------------------REGEVSTAALNVKPLIVAMEASSSLTTS 330
           HFAHG SEL  + G                  + G+V T    V P + +   SS++T  
Sbjct: 193 HFAHGPSELHTFGGGLVEGECKIGTSATLDTKQRGQVDTVTSLVSPGVSSQRTSSAVTQK 251

Query: 331 VLPSSALPEGQAKPSLLKWKGPKKINRIYADWLDDL 336
                  P G    +  KWKGP KI+R+Y DW+DD+
Sbjct: 253 -------PNGVR--TQRKWKGPDKISRVYGDWIDDI 251

[Close]

BLAST of PI0013044 vs. ExPASy Swiss-Prot
Match: Q7XPK1 (Zinc finger CCCH domain-containing protein 31 OS=Oryza sativa subsp. japonica OX=39947 GN=Os04g0665700 PE=2 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 1.3e-10
Identity = 40/117 (34.19%), Postives = 58/117 (49.57%), Query Frame = 0


Query: 151 KMKLCRKFYNGEECPYGDRCNFLHEDPAKFRDDSGRFRESSAISIGTTGTPLMNGSDSSS 210
           K+K C KF++   CP+G+ C+F H  P  ++        +  +++G    P         
Sbjct: 39  KLKPCTKFFSTIGCPFGEGCHFSHFVPGGYQ------AVAKTLNLGNPAVP--------- 98

Query: 211 YMEPSRATSCSASDALRTNGNVRP-SFWKTKLCTKWEITGHCPFGDKCHFAHGQSEL 267
              P+RA    A+      GN  P S  KT++CTK+     C FGDKCHFAHG+ EL
Sbjct: 99  --APARAPMDHAA-----GGNSHPASSGKTRMCTKYNTAEGCKFGDKCHFAHGEREL 133

[Close]

BLAST of PI0013044 vs. ExPASy TrEMBL
Match: A0A5A7V7E5 (Zinc finger CCCH domain-containing protein 39-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold285G00080 PE=4 SV=1)

HSP 1 Score: 708.8 bits (1828), Expect = 1.2e-200
Identity = 339/347 (97.69%), Postives = 341/347 (98.27%), Query Frame = 0


Query: 1   MSFNDMRASVIPPPLHSYGSNGDASACWSQFPRNDPFDPQSQFEVQQPPFKRARNSEENP 60
           MSFNDMR SVIPPPLHSYGSNGDAS CWSQFPRNDPFDPQSQFEVQQPP+KRARNSEENP
Sbjct: 1   MSFNDMRGSVIPPPLHSYGSNGDASGCWSQFPRNDPFDPQSQFEVQQPPYKRARNSEENP 60

Query: 61  SSPISYSNPPLNSRGHPQNAPVNKGISNIFFKTRMCAKFKLGLCRNGASCNFAHGVEDMR 120
           SSPISYSNP LNSRGHP NAPVNKGISNIFFKTRMCAKFKLGLCRNGASCNFAHGVEDMR
Sbjct: 61  SSPISYSNPSLNSRGHPPNAPVNKGISNIFFKTRMCAKFKLGLCRNGASCNFAHGVEDMR 120

Query: 121 QPPPNWQEIVGIKEDDQSVNNWNDDQKIIQKMKLCRKFYNGEECPYGDRCNFLHEDPAKF 180
           QPPPNWQEIVGIKEDDQSVNNWNDDQKIIQKMKLCRKFYNGEECPYGDRCNFLHEDPAKF
Sbjct: 121 QPPPNWQEIVGIKEDDQSVNNWNDDQKIIQKMKLCRKFYNGEECPYGDRCNFLHEDPAKF 180

Query: 181 RDDSGRFRESSAISIGTTGTPLMNGSDSSSYMEPSRATSCSASDALRTNGNVRPSFWKTK 240
           RDDSGRFRESSAISIGTTGTPLMNGSDSSSY+EPSRATSCS SDALR NGNVRPSFWKTK
Sbjct: 181 RDDSGRFRESSAISIGTTGTPLMNGSDSSSYIEPSRATSCSVSDALRANGNVRPSFWKTK 240

Query: 241 LCTKWEITGHCPFGDKCHFAHGQSELQLYIGREGEVSTAALNVKPLIVAMEASSSLTTSV 300
           LCTKWEITGHCPFGDKCHFAHGQSELQLYIGREGEVSTAALNVKPLIVAMEASSSLTTSV
Sbjct: 241 LCTKWEITGHCPFGDKCHFAHGQSELQLYIGREGEVSTAALNVKPLIVAMEASSSLTTSV 300

Query: 301 LPSSALPEGQAKPSLLKWKGPKKINRIYADWLDDLPLSPSSTSKMEG 348
           LPSSALPEGQAKPSLLKWKGPKKINRIYADWLDDLPLSPSSTSKMEG
Sbjct: 301 LPSSALPEGQAKPSLLKWKGPKKINRIYADWLDDLPLSPSSTSKMEG 347

[Close]

BLAST of PI0013044 vs. ExPASy TrEMBL
Match: A0A1S3C7N3 (zinc finger CCCH domain-containing protein 39-like OS=Cucumis melo OX=3656 GN=LOC103497405 PE=4 SV=1)

HSP 1 Score: 708.8 bits (1828), Expect = 1.2e-200
Identity = 339/347 (97.69%), Postives = 341/347 (98.27%), Query Frame = 0


Query: 1   MSFNDMRASVIPPPLHSYGSNGDASACWSQFPRNDPFDPQSQFEVQQPPFKRARNSEENP 60
           MSFNDMR SVIPPPLHSYGSNGDAS CWSQFPRNDPFDPQSQFEVQQPP+KRARNSEENP
Sbjct: 1   MSFNDMRGSVIPPPLHSYGSNGDASGCWSQFPRNDPFDPQSQFEVQQPPYKRARNSEENP 60

Query: 61  SSPISYSNPPLNSRGHPQNAPVNKGISNIFFKTRMCAKFKLGLCRNGASCNFAHGVEDMR 120
           SSPISYSNP LNSRGHP NAPVNKGISNIFFKTRMCAKFKLGLCRNGASCNFAHGVEDMR
Sbjct: 61  SSPISYSNPSLNSRGHPPNAPVNKGISNIFFKTRMCAKFKLGLCRNGASCNFAHGVEDMR 120

Query: 121 QPPPNWQEIVGIKEDDQSVNNWNDDQKIIQKMKLCRKFYNGEECPYGDRCNFLHEDPAKF 180
           QPPPNWQEIVGIKEDDQSVNNWNDDQKIIQKMKLCRKFYNGEECPYGDRCNFLHEDPAKF
Sbjct: 121 QPPPNWQEIVGIKEDDQSVNNWNDDQKIIQKMKLCRKFYNGEECPYGDRCNFLHEDPAKF 180

Query: 181 RDDSGRFRESSAISIGTTGTPLMNGSDSSSYMEPSRATSCSASDALRTNGNVRPSFWKTK 240
           RDDSGRFRESSAISIGTTGTPLMNGSDSSSY+EPSRATSCS SDALR NGNVRPSFWKTK
Sbjct: 181 RDDSGRFRESSAISIGTTGTPLMNGSDSSSYIEPSRATSCSVSDALRANGNVRPSFWKTK 240

Query: 241 LCTKWEITGHCPFGDKCHFAHGQSELQLYIGREGEVSTAALNVKPLIVAMEASSSLTTSV 300
           LCTKWEITGHCPFGDKCHFAHGQSELQLYIGREGEVSTAALNVKPLIVAMEASSSLTTSV
Sbjct: 241 LCTKWEITGHCPFGDKCHFAHGQSELQLYIGREGEVSTAALNVKPLIVAMEASSSLTTSV 300

Query: 301 LPSSALPEGQAKPSLLKWKGPKKINRIYADWLDDLPLSPSSTSKMEG 348
           LPSSALPEGQAKPSLLKWKGPKKINRIYADWLDDLPLSPSSTSKMEG
Sbjct: 301 LPSSALPEGQAKPSLLKWKGPKKINRIYADWLDDLPLSPSSTSKMEG 347

[Close]

BLAST of PI0013044 vs. ExPASy TrEMBL
Match: A0A0A0LKX6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G006070 PE=4 SV=1)

HSP 1 Score: 700.3 bits (1806), Expect = 4.1e-198
Identity = 334/347 (96.25%), Postives = 339/347 (97.69%), Query Frame = 0


Query: 1   MSFNDMRASVIPPPLHSYGSNGDASACWSQFPRNDPFDPQSQFEVQQPPFKRARNSEENP 60
           MSFNDMRASVIPPPLHSYGSNGDAS CWSQFPRNDPFDPQSQFEVQQPP+KRARNSEENP
Sbjct: 1   MSFNDMRASVIPPPLHSYGSNGDASGCWSQFPRNDPFDPQSQFEVQQPPYKRARNSEENP 60

Query: 61  SSPISYSNPPLNSRGHPQNAPVNKGISNIFFKTRMCAKFKLGLCRNGASCNFAHGVEDMR 120
           SSPISYSNP LNSRG P NAPVNKGISNIFFKTRMCAKFKLGLCRNGASCNFAHGVEDMR
Sbjct: 61  SSPISYSNPSLNSRGQPPNAPVNKGISNIFFKTRMCAKFKLGLCRNGASCNFAHGVEDMR 120

Query: 121 QPPPNWQEIVGIKEDDQSVNNWNDDQKIIQKMKLCRKFYNGEECPYGDRCNFLHEDPAKF 180
           QPPPNWQEIVGIKEDDQSVNNWNDDQKIIQKMKLCRKFYNGEECPYGDRCNFLHEDPAKF
Sbjct: 121 QPPPNWQEIVGIKEDDQSVNNWNDDQKIIQKMKLCRKFYNGEECPYGDRCNFLHEDPAKF 180

Query: 181 RDDSGRFRESSAISIGTTGTPLMNGSDSSSYMEPSRATSCSASDALRTNGNVRPSFWKTK 240
           RDDSGRFRESSAISIGTTGTPLMNG+DSSSY+EPSR TSCS SDALR NGNVRPSFWKTK
Sbjct: 181 RDDSGRFRESSAISIGTTGTPLMNGNDSSSYIEPSRVTSCSVSDALRANGNVRPSFWKTK 240

Query: 241 LCTKWEITGHCPFGDKCHFAHGQSELQLYIGREGEVSTAALNVKPLIVAMEASSSLTTSV 300
           LCTKWEITGHCPFGDKCHFAHGQSELQLYIGREGEVSTAALNVKPLIVAMEASSSLTT+V
Sbjct: 241 LCTKWEITGHCPFGDKCHFAHGQSELQLYIGREGEVSTAALNVKPLIVAMEASSSLTTNV 300

Query: 301 LPSSALPEGQAKPSLLKWKGPKKINRIYADWLDDLPLSPSSTSKMEG 348
           +PSSALPEGQ KPSLLKWKGPKKINRIYADWLDDLPLSPSSTSKMEG
Sbjct: 301 VPSSALPEGQEKPSLLKWKGPKKINRIYADWLDDLPLSPSSTSKMEG 347

[Close]

BLAST of PI0013044 vs. ExPASy TrEMBL
Match: A0A6J1G2M8 (zinc finger CCCH domain-containing protein 39-like OS=Cucurbita moschata OX=3662 GN=LOC111450240 PE=4 SV=1)

HSP 1 Score: 636.0 bits (1639), Expect = 9.5e-179
Identity = 307/347 (88.47%), Postives = 320/347 (92.22%), Query Frame = 0


Query: 1   MSFNDMRASVIPPPLHSYGSNGDASACWSQFPRNDPFDPQSQFEVQQPPFKRARNSEENP 60
           MSFNDMR SVIPPPLHSYG+NGDAS CWSQ+PRND FDPQSQFEVQQPPFKRARN EEN 
Sbjct: 1   MSFNDMRGSVIPPPLHSYGANGDASGCWSQYPRNDLFDPQSQFEVQQPPFKRARNFEENQ 60

Query: 61  SSPISYSNPPLNSRGHPQNAPVNKGISNIFFKTRMCAKFKLGLCRNGASCNFAHGVEDMR 120
           SSP+ Y NPP NSR  P NAP+NKGI+NIFFKTRMCAKFKLGLCRNGASCNFAHGVEDMR
Sbjct: 61  SSPMPYPNPPSNSRVQPPNAPMNKGINNIFFKTRMCAKFKLGLCRNGASCNFAHGVEDMR 120

Query: 121 QPPPNWQEIVGIKEDDQSVNNWNDDQKIIQKMKLCRKFYNGEECPYGDRCNFLHEDPAKF 180
           QPPPNWQEIVGI+EDDQSV+NWNDDQKIIQKMKLCRKFYNGEECPYGDRCNFLHEDPAKF
Sbjct: 121 QPPPNWQEIVGIREDDQSVSNWNDDQKIIQKMKLCRKFYNGEECPYGDRCNFLHEDPAKF 180

Query: 181 RDDSGRFRESSAISIGTTGTPLMNGSDSSSYMEPSRATSCSASDALRTNGNVRPSFWKTK 240
           RDDSGRFRESSAISIGTTGTPL+NGSD SSY EP +A S S  DALR NGN RPSFWKTK
Sbjct: 181 RDDSGRFRESSAISIGTTGTPLINGSD-SSYPEPIKAASSSVPDALRANGNSRPSFWKTK 240

Query: 241 LCTKWEITGHCPFGDKCHFAHGQSELQLYIGREGEVSTAALNVKPLIVAMEASSSLTTSV 300
           LCTKWEITGHCPFG+KCHFAHGQSELQL IGREGEVS  ALNVKPL+VAMEA SSL TSV
Sbjct: 241 LCTKWEITGHCPFGEKCHFAHGQSELQLSIGREGEVSNTALNVKPLVVAMEAPSSLATSV 300

Query: 301 LPSSALPEGQAKPSLLKWKGPKKINRIYADWLDDLPLSPSSTSKMEG 348
            PSSALPEGQAK SLLKWKGPKKINRIYADWLDDLPLSPSSTS++EG
Sbjct: 301 -PSSALPEGQAKQSLLKWKGPKKINRIYADWLDDLPLSPSSTSQLEG 345

[Close]

BLAST of PI0013044 vs. ExPASy TrEMBL
Match: A0A6J1KJ53 (zinc finger CCCH domain-containing protein 39-like OS=Cucurbita maxima OX=3661 GN=LOC111493694 PE=4 SV=1)

HSP 1 Score: 626.3 bits (1614), Expect = 7.5e-176
Identity = 302/347 (87.03%), Postives = 315/347 (90.78%), Query Frame = 0


Query: 1   MSFNDMRASVIPPPLHSYGSNGDASACWSQFPRNDPFDPQSQFEVQQPPFKRARNSEENP 60
           MSFNDMR SVIPPPLHSYG+NGDAS CWSQ+PRND FDPQSQFE QQPPFKRAR  EEN 
Sbjct: 1   MSFNDMRGSVIPPPLHSYGANGDASGCWSQYPRNDLFDPQSQFEAQQPPFKRARTFEENQ 60

Query: 61  SSPISYSNPPLNSRGHPQNAPVNKGISNIFFKTRMCAKFKLGLCRNGASCNFAHGVEDMR 120
           SSP+ Y NPP NSR  P NAP+NKGI+NIFFKTRMCAKFKLGLCRNGASCNFAHGVEDMR
Sbjct: 61  SSPMPYPNPPSNSRVQPPNAPMNKGINNIFFKTRMCAKFKLGLCRNGASCNFAHGVEDMR 120

Query: 121 QPPPNWQEIVGIKEDDQSVNNWNDDQKIIQKMKLCRKFYNGEECPYGDRCNFLHEDPAKF 180
           QPPPNWQEIVGI+EDDQSV+NWNDDQKIIQKMKLCRKFYNGEECPYGDRCNFLHEDPAKF
Sbjct: 121 QPPPNWQEIVGIREDDQSVSNWNDDQKIIQKMKLCRKFYNGEECPYGDRCNFLHEDPAKF 180

Query: 181 RDDSGRFRESSAISIGTTGTPLMNGSDSSSYMEPSRATSCSASDALRTNGNVRPSFWKTK 240
           RDDSGRFRESSAISIGTTGTPLMNGSD SSY EP +A S S  DALR NGN RPSFWKTK
Sbjct: 181 RDDSGRFRESSAISIGTTGTPLMNGSD-SSYPEPIKAASSSVPDALRANGNSRPSFWKTK 240

Query: 241 LCTKWEITGHCPFGDKCHFAHGQSELQLYIGREGEVSTAALNVKPLIVAMEASSSLTTSV 300
           LCTKWEITGHCPFG+KCHFAHGQSELQL IGREGEVS  ALNVKPL+VAMEA SS     
Sbjct: 241 LCTKWEITGHCPFGEKCHFAHGQSELQLSIGREGEVSNTALNVKPLVVAMEAPSS----- 300

Query: 301 LPSSALPEGQAKPSLLKWKGPKKINRIYADWLDDLPLSPSSTSKMEG 348
           +PSSALPEGQAK SLLKWKGPKKINRIYADWLDDLPLSPSSTS++EG
Sbjct: 301 VPSSALPEGQAKQSLLKWKGPKKINRIYADWLDDLPLSPSSTSQLEG 341

[Close]

BLAST of PI0013044 vs. NCBI nr
Match: XP_008457806.1 (PREDICTED: zinc finger CCCH domain-containing protein 39-like [Cucumis melo] >KAA0061589.1 zinc finger CCCH domain-containing protein 39-like [Cucumis melo var. makuwa] >TYJ97798.1 zinc finger CCCH domain-containing protein 39-like [Cucumis melo var. makuwa])

HSP 1 Score: 708.8 bits (1828), Expect = 2.4e-200
Identity = 339/347 (97.69%), Postives = 341/347 (98.27%), Query Frame = 0


Query: 1   MSFNDMRASVIPPPLHSYGSNGDASACWSQFPRNDPFDPQSQFEVQQPPFKRARNSEENP 60
           MSFNDMR SVIPPPLHSYGSNGDAS CWSQFPRNDPFDPQSQFEVQQPP+KRARNSEENP
Sbjct: 1   MSFNDMRGSVIPPPLHSYGSNGDASGCWSQFPRNDPFDPQSQFEVQQPPYKRARNSEENP 60

Query: 61  SSPISYSNPPLNSRGHPQNAPVNKGISNIFFKTRMCAKFKLGLCRNGASCNFAHGVEDMR 120
           SSPISYSNP LNSRGHP NAPVNKGISNIFFKTRMCAKFKLGLCRNGASCNFAHGVEDMR
Sbjct: 61  SSPISYSNPSLNSRGHPPNAPVNKGISNIFFKTRMCAKFKLGLCRNGASCNFAHGVEDMR 120

Query: 121 QPPPNWQEIVGIKEDDQSVNNWNDDQKIIQKMKLCRKFYNGEECPYGDRCNFLHEDPAKF 180
           QPPPNWQEIVGIKEDDQSVNNWNDDQKIIQKMKLCRKFYNGEECPYGDRCNFLHEDPAKF
Sbjct: 121 QPPPNWQEIVGIKEDDQSVNNWNDDQKIIQKMKLCRKFYNGEECPYGDRCNFLHEDPAKF 180

Query: 181 RDDSGRFRESSAISIGTTGTPLMNGSDSSSYMEPSRATSCSASDALRTNGNVRPSFWKTK 240
           RDDSGRFRESSAISIGTTGTPLMNGSDSSSY+EPSRATSCS SDALR NGNVRPSFWKTK
Sbjct: 181 RDDSGRFRESSAISIGTTGTPLMNGSDSSSYIEPSRATSCSVSDALRANGNVRPSFWKTK 240

Query: 241 LCTKWEITGHCPFGDKCHFAHGQSELQLYIGREGEVSTAALNVKPLIVAMEASSSLTTSV 300
           LCTKWEITGHCPFGDKCHFAHGQSELQLYIGREGEVSTAALNVKPLIVAMEASSSLTTSV
Sbjct: 241 LCTKWEITGHCPFGDKCHFAHGQSELQLYIGREGEVSTAALNVKPLIVAMEASSSLTTSV 300

Query: 301 LPSSALPEGQAKPSLLKWKGPKKINRIYADWLDDLPLSPSSTSKMEG 348
           LPSSALPEGQAKPSLLKWKGPKKINRIYADWLDDLPLSPSSTSKMEG
Sbjct: 301 LPSSALPEGQAKPSLLKWKGPKKINRIYADWLDDLPLSPSSTSKMEG 347

[Close]

BLAST of PI0013044 vs. NCBI nr
Match: XP_004139420.1 (zinc finger CCCH domain-containing protein 39 [Cucumis sativus] >KGN60661.1 hypothetical protein Csa_019214 [Cucumis sativus])

HSP 1 Score: 700.3 bits (1806), Expect = 8.5e-198
Identity = 334/347 (96.25%), Postives = 339/347 (97.69%), Query Frame = 0


Query: 1   MSFNDMRASVIPPPLHSYGSNGDASACWSQFPRNDPFDPQSQFEVQQPPFKRARNSEENP 60
           MSFNDMRASVIPPPLHSYGSNGDAS CWSQFPRNDPFDPQSQFEVQQPP+KRARNSEENP
Sbjct: 1   MSFNDMRASVIPPPLHSYGSNGDASGCWSQFPRNDPFDPQSQFEVQQPPYKRARNSEENP 60

Query: 61  SSPISYSNPPLNSRGHPQNAPVNKGISNIFFKTRMCAKFKLGLCRNGASCNFAHGVEDMR 120
           SSPISYSNP LNSRG P NAPVNKGISNIFFKTRMCAKFKLGLCRNGASCNFAHGVEDMR
Sbjct: 61  SSPISYSNPSLNSRGQPPNAPVNKGISNIFFKTRMCAKFKLGLCRNGASCNFAHGVEDMR 120

Query: 121 QPPPNWQEIVGIKEDDQSVNNWNDDQKIIQKMKLCRKFYNGEECPYGDRCNFLHEDPAKF 180
           QPPPNWQEIVGIKEDDQSVNNWNDDQKIIQKMKLCRKFYNGEECPYGDRCNFLHEDPAKF
Sbjct: 121 QPPPNWQEIVGIKEDDQSVNNWNDDQKIIQKMKLCRKFYNGEECPYGDRCNFLHEDPAKF 180

Query: 181 RDDSGRFRESSAISIGTTGTPLMNGSDSSSYMEPSRATSCSASDALRTNGNVRPSFWKTK 240
           RDDSGRFRESSAISIGTTGTPLMNG+DSSSY+EPSR TSCS SDALR NGNVRPSFWKTK
Sbjct: 181 RDDSGRFRESSAISIGTTGTPLMNGNDSSSYIEPSRVTSCSVSDALRANGNVRPSFWKTK 240

Query: 241 LCTKWEITGHCPFGDKCHFAHGQSELQLYIGREGEVSTAALNVKPLIVAMEASSSLTTSV 300
           LCTKWEITGHCPFGDKCHFAHGQSELQLYIGREGEVSTAALNVKPLIVAMEASSSLTT+V
Sbjct: 241 LCTKWEITGHCPFGDKCHFAHGQSELQLYIGREGEVSTAALNVKPLIVAMEASSSLTTNV 300

Query: 301 LPSSALPEGQAKPSLLKWKGPKKINRIYADWLDDLPLSPSSTSKMEG 348
           +PSSALPEGQ KPSLLKWKGPKKINRIYADWLDDLPLSPSSTSKMEG
Sbjct: 301 VPSSALPEGQEKPSLLKWKGPKKINRIYADWLDDLPLSPSSTSKMEG 347

[Close]

BLAST of PI0013044 vs. NCBI nr
Match: XP_038890424.1 (zinc finger CCCH domain-containing protein 39 [Benincasa hispida])

HSP 1 Score: 642.1 bits (1655), Expect = 2.7e-180
Identity = 313/348 (89.94%), Postives = 322/348 (92.53%), Query Frame = 0


Query: 1   MSFNDMRASVIPPPLHSYG-SNGDASACWSQFPRNDPFDPQSQFEVQQPPFKRARNSEEN 60
           MSFNDMRASV+ PPLHSYG +NGD S CWSQFPRNDPFDP SQFEVQQPPFKRARNSEEN
Sbjct: 1   MSFNDMRASVLSPPLHSYGAANGDVSGCWSQFPRNDPFDPHSQFEVQQPPFKRARNSEEN 60

Query: 61  PSSPISYSNPPLNSRGHPQNAPVNKGISNIFFKTRMCAKFKLGLCRNGASCNFAHGVEDM 120
            SSPI YS+P LNSR HP NAPVNKGISNIFFKTRMCAKFKLGLCRNGASCNFAHGVEDM
Sbjct: 61  QSSPIPYSSPSLNSRVHPPNAPVNKGISNIFFKTRMCAKFKLGLCRNGASCNFAHGVEDM 120

Query: 121 RQPPPNWQEIVGIKEDDQSVNNWNDDQKIIQKMKLCRKFYNGEECPYGDRCNFLHEDPAK 180
           RQPPPNWQEIVGI+EDDQSV+NWNDDQKIIQK+KLCRKFYNGEECPYGDRCNFLHEDPAK
Sbjct: 121 RQPPPNWQEIVGIREDDQSVSNWNDDQKIIQKLKLCRKFYNGEECPYGDRCNFLHEDPAK 180

Query: 181 FRDDSGRFRESSAISIGTTGTPLMNGSDSSSYMEPSRATSCSASDALRTNGNVRPSFWKT 240
           FRDD GRFRESSAISIGTTGTPLMNGSD SSY EPSRATS S SDALR NGN RPSFWKT
Sbjct: 181 FRDDLGRFRESSAISIGTTGTPLMNGSD-SSYPEPSRATSSSVSDALRANGNARPSFWKT 240

Query: 241 KLCTKWEITGHCPFGDKCHFAHGQSELQLYIGREGEVSTAALNVKPLIVAMEASSSLTTS 300
           KLCTKWEITGHCPFGDKCHFAHGQSELQL +GREGE S+AALNVKPLIV MEASSSL TS
Sbjct: 241 KLCTKWEITGHCPFGDKCHFAHGQSELQLSLGREGEASSAALNVKPLIVTMEASSSLATS 300

Query: 301 VLPSSALPEGQAKPSLLKWKGPKKINRIYADWLDDLPLSPSSTSKMEG 348
           V PSSAL +GQ KP LLKWKGPKKINRIYADWLDDLPLSPS TSKMEG
Sbjct: 301 V-PSSALLDGQVKPCLLKWKGPKKINRIYADWLDDLPLSPSPTSKMEG 346

[Close]

BLAST of PI0013044 vs. NCBI nr
Match: KAG6599412.1 (Zinc finger CCCH domain-containing protein 39, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 636.7 bits (1641), Expect = 1.1e-178
Identity = 306/347 (88.18%), Postives = 321/347 (92.51%), Query Frame = 0


Query: 1   MSFNDMRASVIPPPLHSYGSNGDASACWSQFPRNDPFDPQSQFEVQQPPFKRARNSEENP 60
           MSFNDMR SVIPPPLHSYG+NGDAS CWSQ+PRND FDPQSQFEVQQPPFKRARN EEN 
Sbjct: 233 MSFNDMRGSVIPPPLHSYGANGDASGCWSQYPRNDLFDPQSQFEVQQPPFKRARNFEENQ 292

Query: 61  SSPISYSNPPLNSRGHPQNAPVNKGISNIFFKTRMCAKFKLGLCRNGASCNFAHGVEDMR 120
           SSP+ Y NPP NSR  P NAP+NKGI+NIFFKTRMCAKFKLGLCRNGASCNFAHGVEDMR
Sbjct: 293 SSPMPYPNPPSNSRVQPPNAPMNKGINNIFFKTRMCAKFKLGLCRNGASCNFAHGVEDMR 352

Query: 121 QPPPNWQEIVGIKEDDQSVNNWNDDQKIIQKMKLCRKFYNGEECPYGDRCNFLHEDPAKF 180
           QPPPNWQEIVGI+EDDQSV+NWNDDQKIIQKMKLCRKFYNGEECPYGDRCNFLHEDPAKF
Sbjct: 353 QPPPNWQEIVGIREDDQSVSNWNDDQKIIQKMKLCRKFYNGEECPYGDRCNFLHEDPAKF 412

Query: 181 RDDSGRFRESSAISIGTTGTPLMNGSDSSSYMEPSRATSCSASDALRTNGNVRPSFWKTK 240
           RDDSGRFRESSAISIGTTGTPL+NGSD SSY EP +A S S  DALR NGN RPSFWKTK
Sbjct: 413 RDDSGRFRESSAISIGTTGTPLINGSD-SSYPEPIKAASSSVPDALRANGNSRPSFWKTK 472

Query: 241 LCTKWEITGHCPFGDKCHFAHGQSELQLYIGREGEVSTAALNVKPLIVAMEASSSLTTSV 300
           LCTKWEITGHCPFG+KCHFAHGQSELQL+IGREGEVS  ALNVKPL+VAMEA SSL TSV
Sbjct: 473 LCTKWEITGHCPFGEKCHFAHGQSELQLFIGREGEVSNTALNVKPLVVAMEAPSSLATSV 532

Query: 301 LPSSALPEGQAKPSLLKWKGPKKINRIYADWLDDLPLSPSSTSKMEG 348
            PSSALPEGQAK SLLKWKGPKKINRIYADWLDDLPLSP+STS++EG
Sbjct: 533 -PSSALPEGQAKQSLLKWKGPKKINRIYADWLDDLPLSPNSTSQLEG 577

[Close]

BLAST of PI0013044 vs. NCBI nr
Match: KAG7030401.1 (Zinc finger CCCH domain-containing protein 39, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 636.7 bits (1641), Expect = 1.1e-178
Identity = 306/347 (88.18%), Postives = 321/347 (92.51%), Query Frame = 0


Query: 1   MSFNDMRASVIPPPLHSYGSNGDASACWSQFPRNDPFDPQSQFEVQQPPFKRARNSEENP 60
           MSFNDMR SVIPPPLHSYG+NGDAS CWSQ+PRND FDPQSQFEVQQPPFKRARN EEN 
Sbjct: 1   MSFNDMRGSVIPPPLHSYGANGDASGCWSQYPRNDLFDPQSQFEVQQPPFKRARNFEENQ 60

Query: 61  SSPISYSNPPLNSRGHPQNAPVNKGISNIFFKTRMCAKFKLGLCRNGASCNFAHGVEDMR 120
           SSP+ Y NPP NSR  P NAP+NKGI+NIFFKTRMCAKFKLGLCRNGASCNFAHGVEDMR
Sbjct: 61  SSPMPYPNPPSNSRVQPPNAPMNKGINNIFFKTRMCAKFKLGLCRNGASCNFAHGVEDMR 120

Query: 121 QPPPNWQEIVGIKEDDQSVNNWNDDQKIIQKMKLCRKFYNGEECPYGDRCNFLHEDPAKF 180
           QPPPNWQEIVGI+EDDQSV+NWNDDQKIIQKMKLCRKFYNGEECPYGDRCNFLHEDPAKF
Sbjct: 121 QPPPNWQEIVGIREDDQSVSNWNDDQKIIQKMKLCRKFYNGEECPYGDRCNFLHEDPAKF 180

Query: 181 RDDSGRFRESSAISIGTTGTPLMNGSDSSSYMEPSRATSCSASDALRTNGNVRPSFWKTK 240
           RDDSGRFRESSAISIGTTGTPL+NGSD SSY EP +A S S  DALR NGN RPSFWKTK
Sbjct: 181 RDDSGRFRESSAISIGTTGTPLINGSD-SSYPEPIKAASSSVPDALRANGNSRPSFWKTK 240

Query: 241 LCTKWEITGHCPFGDKCHFAHGQSELQLYIGREGEVSTAALNVKPLIVAMEASSSLTTSV 300
           LCTKWEITGHCPFG+KCHFAHGQSELQL+IGREGEVS  ALNVKPL+VAMEA SSL TSV
Sbjct: 241 LCTKWEITGHCPFGEKCHFAHGQSELQLFIGREGEVSNTALNVKPLVVAMEAPSSLATSV 300

Query: 301 LPSSALPEGQAKPSLLKWKGPKKINRIYADWLDDLPLSPSSTSKMEG 348
            PSSALPEGQAK SLLKWKGPKKINRIYADWLDDLPLSP+STS++EG
Sbjct: 301 -PSSALPEGQAKQSLLKWKGPKKINRIYADWLDDLPLSPNSTSQLEG 345

[Close]

BLAST of PI0013044 vs. TAIR 10
Match: AT3G19360.1 (Zinc finger (CCCH-type) family protein )

HSP 1 Score: 295.4 bits (755), Expect = 5.8e-80
Identity = 169/340 (49.71%), Postives = 208/340 (61.18%), Query Frame = 0


Query: 40  QSQFEVQ-QPPFKRARNSEENPSSPI------SYSNPPLNSRGHPQNAPVNKGISNIFFK 99
           QSQ   Q QP  KR R  ++N  +P       S SNP +    +P   PVNKG +NIF+K
Sbjct: 49  QSQPSQQLQPALKRPRLVDDNLFNPASSFPQPSSSNPWMVPSLNP--PPVNKGTANIFYK 108

Query: 100 TRMCAKFKLGLCRNGASCNFAHGVEDMRQPPPNWQEIVGIKEDDQS-------------- 159
           TRMCAKF+ G CRNG  CNFAHG+ED+RQPP NWQEIVG     Q               
Sbjct: 109 TRMCAKFRAGTCRNGELCNFAHGIEDLRQPPSNWQEIVGPPPAGQDRERERERERERERP 168

Query: 160 ------VNNWNDDQKIIQKMKLCRKFYNGEECPYGDRCNFLHEDPAKFRDDSGRFRESSA 219
                  NNW DDQKII +MKLCRKF  GEECPYGDRCNF+HED +KFR+DSG+ RESS 
Sbjct: 169 SLAPVVNNNWEDDQKIILRMKLCRKFCFGEECPYGDRCNFIHEDLSKFREDSGKLRESSV 228

Query: 220 ISIGTTGTPLMNGSDSSSYMEPSRATSCSASDALRTNGNVRPSFWKTKLCTKWEITGHCP 279
           IS+G T         +S+ +E +R  S      +   G V+  +WKT+LC K++ITG CP
Sbjct: 229 ISVGATAAD-QPSDTASNLIEVNRQGSIPVPAPMNNGGVVKTVYWKTRLCMKFDITGQCP 288

Query: 280 FGDKCHFAHGQSELQLYIGR-EGEV--STAALNVKPLIVAME--ASSSLTTSVLPSSAL- 339
           FGDKCHFAHGQ+EL   +GR EGE   + A++N + ++ A E  A   +T     SS L 
Sbjct: 289 FGDKCHFAHGQAELHNSVGRVEGEAMNAVASVNKQAVVPANEAFAMKPITQVTADSSGLN 348

Query: 340 PEGQAKPSLLKWKGPKKINRIYADWLDDLPLSPSSTSKME 347
            EG+ K  LLKW   KKINRIY DW+DDLP+   ST  +E
Sbjct: 349 EEGRRKKCLLKWSDSKKINRIYGDWIDDLPVGQKSTKPVE 385

[Close]

BLAST of PI0013044 vs. TAIR 10
Match: AT1G32360.1 (Zinc finger (CCCH-type) family protein )

HSP 1 Score: 181.0 bits (458), Expect = 1.6e-45
Identity = 130/390 (33.33%), Postives = 179/390 (45.90%), Query Frame = 0


Query: 12  PPPLHSYGSNGDASA---------CWSQFPRNDPFDPQSQFEVQQPPFKRARNSEENPSS 71
           PPP + + + GD++           W+  P N   D         PP K+ R S   PSS
Sbjct: 21  PPPDNWFPNLGDSAVWATEDDYNRAWAMNPDNTSGDNNG------PPNKKTRGS---PSS 80

Query: 72  PISYSNPPLNSRGHPQNAPVNKGISNIFFKTRMCAKFKLGLCRNGASCNFAHGVEDMRQP 131
             + +    ++R         K I  +FFKT++C KF+ G C    +CNFAH VE++R+P
Sbjct: 81  SSATTTSAASNR--------TKAIGKMFFKTKLCCKFRAGTCPYITNCNFAHTVEELRRP 140

Query: 132 PPNWQEIVGIKEDDQSVNNWNDDQKIIQ----------------------KMKLCRKFYN 191
           PPNWQEIV   E+++S         +++                      K + C+KFY 
Sbjct: 141 PPNWQEIVAAHEEERSGGMGTPTVSVVEIPREEFQIPSLVSSTAESGRSFKGRHCKKFYT 200

Query: 192 GEECPYGDRCNFLHEDPAKFRDDSGRFRESSAISIGTTGTPLMNGSDSSSYMEPSRATSC 251
            E CPYG+ C FLH       D++ R RES AIS+G  G     G  S      S     
Sbjct: 201 EEGCPYGESCTFLH-------DEASRNRESVAISLGPGGYGSGGGGGSGG---GSVGGGG 260

Query: 252 SASDALRTNGN-----------VRPSFWKTKLCTKWEITGHCPFGDKCHFAHGQSELQLY 311
           S+S+ +   G            ++PS WKT++C KWEITG+CPFG KCHFAHG +EL  +
Sbjct: 261 SSSNVVVLGGGGGSGSGSGIQILKPSNWKTRICNKWEITGYCPFGAKCHFAHGAAELHRF 320

Query: 312 -------IGREG-----EVSTAALNVKPLI---------VAMEASSSLTTSVLPSSALPE 336
                   G++G     +      N K L          V   A +S  T V    A   
Sbjct: 321 GGGLVEEEGKDGVSPNPDTKQTVQNPKGLSDTTTLLSPGVPHNADASYHTGVALQRASSA 380

[Close]

BLAST of PI0013044 vs. TAIR 10
Match: AT2G35430.1 (Zinc finger C-x8-C-x5-C-x3-H type family protein )

HSP 1 Score: 99.0 bits (245), Expect = 8.0e-21
Identity = 68/216 (31.48%), Postives = 96/216 (44.44%), Query Frame = 0


Query: 151 KMKLCRKFYNGEECPY-GDRCNFLHE---------DPAKFRD---DSGRFRESSAISIGT 210
           K KLC KF  G  CPY    C+F H           P  +++   ++ R RES A+S+G 
Sbjct: 73  KTKLCFKFRAG-TCPYSASSCHFAHSAEELRLPPPPPPNWQETVTEASRNRESFAVSLGP 132

Query: 211 TGTPLMNGSDSSSYMEPSRATSCSASDALRTNGNVRPSFWKTKLCTKWEITGHCPFGDKC 270
            G                     + +  L++        WKT++C KW+ TG+CPFG  C
Sbjct: 133 RG---------------------NVAQTLKSPN------WKTRICNKWQTTGYCPFGSHC 192

Query: 271 HFAHGQSELQLYIG------------------REGEVSTAALNVKPLIVAMEASSSLTTS 330
           HFAHG SEL  + G                  + G+V T    V P + +   SS++T  
Sbjct: 193 HFAHGPSELHTFGGGLVEGECKIGTSATLDTKQRGQVDTVTSLVSPGVSSQRTSSAVTQK 251

Query: 331 VLPSSALPEGQAKPSLLKWKGPKKINRIYADWLDDL 336
                  P G    +  KWKGP KI+R+Y DW+DD+
Sbjct: 253 -------PNGVR--TQRKWKGPDKISRVYGDWIDDI 251

[Close]

BLAST of PI0013044 vs. TAIR 10
Match: AT1G66810.1 (Zinc finger C-x8-C-x5-C-x3-H type family protein )

HSP 1 Score: 49.7 bits (117), Expect = 5.6e-06
Identity = 32/100 (32.00%), Postives = 50/100 (50.00%), Query Frame = 0


Query: 181 RDDSGRFRESSAISIGTTGTPLMNGSDSSSYMEPSRATSCSASDA-----LRTNGN---- 240
           R++  R     +IS+ + G   +N    +S ++ S+ +S S S +     ++T G     
Sbjct: 164 RNNQERNSLPKSISVRSQGYLKINHGFEASDLQTSQLSSNSVSSSQKVCVVQTKGEREAL 223

Query: 241 ----VRPSFWKTKLCTKWEITGHCPFGDKCHFAHGQSELQ 268
                R    KT+LC KW+ TG C +GD C FAHG  EL+
Sbjct: 224 ELEVYRQGMMKTELCNKWQETGACCYGDNCQFAHGIDELR 263

[Close]

BLAST of PI0013044 vs. TAIR 10
Match: AT1G68200.1 (Zinc finger C-x8-C-x5-C-x3-H type family protein )

HSP 1 Score: 47.4 bits (111), Expect = 2.8e-05
Identity = 28/107 (26.17%), Postives = 48/107 (44.86%), Query Frame = 0


Query: 92  KTRMCAKF-KLGLCRNGASCNFAHGVEDMRQPPPNWQEIVGIKEDDQSVNNWNDDQKIIQ 151
           KT +C K+ + G C  G  C FAHG++++R    + +                       
Sbjct: 224 KTELCNKWQETGTCPYGDHCQFAHGIKELRPVIRHPR----------------------Y 283

Query: 152 KMKLCRKFYNGEECPYGDRCNFLHEDPAKFRDDSGRFRESSAISIGT 198
           K ++CR    G+ CPYG RC+F H    + +  +  F+  S++ + T
Sbjct: 284 KTEVCRMVLAGDNCPYGHRCHFRHSLSEQEKLVAAGFKPKSSLKLIT 308

The following BLAST results are available for this feature:

BLAST of PI0013044 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LT81	8.2e-79	49.71	Zinc finger CCCH domain-containing protein 39 OS=Arabidopsis thaliana OX=3702 GN...	[more]
Q84UQ3	2.9e-47	35.55	Zinc finger CCCH domain-containing protein 56 OS=Oryza sativa subsp. japonica OX...	[more]
Q9LQM3	2.3e-44	33.33	Zinc finger CCCH domain-containing protein 12 OS=Arabidopsis thaliana OX=3702 GN...	[more]
Q5PP65	1.1e-19	31.48	Zinc finger CCCH domain-containing protein 28 OS=Arabidopsis thaliana OX=3702 GN...	[more]
Q7XPK1	1.3e-10	34.19	Zinc finger CCCH domain-containing protein 31 OS=Oryza sativa subsp. japonica OX...	[more]

BLAST of PI0013044 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7V7E5	1.2e-200	97.69	Zinc finger CCCH domain-containing protein 39-like OS=Cucumis melo var. makuwa O...	[more]
A0A1S3C7N3	1.2e-200	97.69	zinc finger CCCH domain-containing protein 39-like OS=Cucumis melo OX=3656 GN=LO...	[more]
A0A0A0LKX6	4.1e-198	96.25	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G006070 PE=4 SV=1	[more]
A0A6J1G2M8	9.5e-179	88.47	zinc finger CCCH domain-containing protein 39-like OS=Cucurbita moschata OX=3662...	[more]
A0A6J1KJ53	7.5e-176	87.03	zinc finger CCCH domain-containing protein 39-like OS=Cucurbita maxima OX=3661 G...	[more]

BLAST of PI0013044 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008457806.1	2.4e-200	97.69	PREDICTED: zinc finger CCCH domain-containing protein 39-like [Cucumis melo] >KA...	[more]
XP_004139420.1	8.5e-198	96.25	zinc finger CCCH domain-containing protein 39 [Cucumis sativus] >KGN60661.1 hypo...	[more]
XP_038890424.1	2.7e-180	89.94	zinc finger CCCH domain-containing protein 39 [Benincasa hispida]	[more]
KAG6599412.1	1.1e-178	88.18	Zinc finger CCCH domain-containing protein 39, partial [Cucurbita argyrosperma s...	[more]
KAG7030401.1	1.1e-178	88.18	Zinc finger CCCH domain-containing protein 39, partial [Cucurbita argyrosperma s...	[more]

BLAST of PI0013044 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G19360.1	5.8e-80	49.71	Zinc finger (CCCH-type) family protein	[more]
AT1G32360.1	1.6e-45	33.33	Zinc finger (CCCH-type) family protein	[more]
AT2G35430.1	8.0e-21	31.48	Zinc finger C-x8-C-x5-C-x3-H type family protein	[more]
AT1G66810.1	5.6e-06	32.00	Zinc finger C-x8-C-x5-C-x3-H type family protein	[more]
AT1G68200.1	2.8e-05	26.17	Zinc finger C-x8-C-x5-C-x3-H type family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000571	Zinc finger, CCCH-type	SMART	SM00356	c3hfinal6	coord: 149..176 e-value: 4.1E-5 score: 33.0 coord: 236..263 e-value: 6.9E-8 score: 42.2 coord: 90..116 e-value: 0.0021 score: 27.3
IPR000571	Zinc finger, CCCH-type	PFAM	PF00642	zf-CCCH	coord: 91..115 e-value: 3.5E-5 score: 23.6 coord: 237..263 e-value: 5.8E-11 score: 42.0 coord: 150..174 e-value: 1.4E-7 score: 31.2
IPR000571	Zinc finger, CCCH-type	PROSITE	PS50103	ZF_C3H1	coord: 236..264 score: 16.088787
IPR000571	Zinc finger, CCCH-type	PROSITE	PS50103	ZF_C3H1	coord: 90..117 score: 13.797847
IPR000571	Zinc finger, CCCH-type	PROSITE	PS50103	ZF_C3H1	coord: 149..177 score: 15.403383
None	No IPR available	GENE3D	4.10.1000.10		coord: 230..268 e-value: 7.4E-16 score: 59.2 coord: 85..121 e-value: 9.2E-10 score: 39.7 coord: 149..178 e-value: 2.7E-7 score: 31.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 29..80
None	No IPR available	PANTHER	PTHR12547	CCCH ZINC FINGER/TIS11-RELATED	coord: 1..336
None	No IPR available	PANTHER	PTHR12547:SF121	ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 39	coord: 1..336
IPR036855	Zinc finger, CCCH-type superfamily	SUPERFAMILY	90229	CCCH zinc finger	coord: 233..268
IPR036855	Zinc finger, CCCH-type superfamily	SUPERFAMILY	90229	CCCH zinc finger	coord: 149..176
IPR036855	Zinc finger, CCCH-type superfamily	SUPERFAMILY	90229	CCCH zinc finger	coord: 89..121

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0013044.1	PI0013044.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0046872	metal ion binding