PI0012977 (gene) Melon (PI 482460) v1

Overview
NamePI0012977
Typegene
OrganismCucumis metuliferus (Melon (PI 482460) v1)
Description50S ribosomal protein L34, chloroplastic
Locationchr04: 1710578 .. 1714338 (-)
RNA-Seq ExpressionPI0012977
SyntenyPI0012977
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GCAGAATTAGCTGAAAGGGGGAAAAACACAGTCTAACAATGGCAGCGATATCGGTATTATCGTCCCCATGGGTTTCCACTGGAGCCATTGCCGTCCGCGTTCCTTCAGCTTCTCTTGTAATCTCAACTGGTTCTAGAGGTTGCTGCTCCGTATCTCTGAATACCGCCAACAACACTTCCGCCCGTTCTGGACTACTCCATTGTTCATTTCTTCCATCTTCCTCCCTCTCCTGCTCTTCATCTTTTTCAGGTGACGAATTTATACTCTCAAATTTCTCTATCAGTTCAAATGATTTAATTATTTCGCGCTATTTCTATCCAATTTGCCTATGCAATGGAGTCTTATAGTAGTTCACTGAAGAATTCATTTACTGTCGTTTGTGTTTATCACTTTCGTTTGACTTAATAATTTCACGGCTGGCCCGATTTCTGCTTGCATTCGATTTGTTATGACTTCTCTCGTTTTTATATCTAATAATTCGTTGTGTTTCACATGTTGAGGGGAAAATAAAAGAATATCTATGCACCCTCTCCTGCAATATTGCGGAGCTTCTCTTGCATTGCTTAATTCTATTGATCAAGATTTTGTACCATTAACTTTACGGGGCAATACTCATTATTTGCAGGTTTATCTTTGGGTTTGGATTGGAGCACTAAGATTGGGGTCGGACAAGGGAAGGGTCGGAGCTTAGTGGTTAGGGCTGGCAAGGCTGCACTATGTCAGACTAAAAGAAACAGGTCACGTAAATCCTTAGCTCGGACTCATGGGTTTCGCAGACGAATGCGAACCACCAATGGTAGAGCTGTTCTCAAGCGCAGACGTGCCAAGGGTAGGAAGGTCCTCTGCACAAAGTCCAACCCTAGCAGCGGAAAGCGTGCTTAAGTTTTTCTCGCTTTAACCATTTTTAGGTTAATTAGGCAATGTTGTCTAATTCACTCTTCCAATGACTGGTCAAGGTAGCTCACTATATTACATGATGCTTTGTTATTGATTCATTTGAAAGTTTCTTAATTGCAATGTTAAATTCAAATGTCCTGACGGGACAAGCTTATGTGATTGATGCGTTTGTATTCTTCATTTGAAAATCTCCTCTGAACTGAAATATGTACATCTTCTTAAAACCTGAGGTTTGTATTTGTTGCTACTAACCTAATACTAGGTCATCTCGTCATTCATTTTTAGGCCTGAAATCTGATTTGTATCAGTTTCTCTCTAGTATTGTCTTTGTTTGAGCTACTCTGTAGCTTTTCATGTCAAAACACAATTGTTATTGACATTTCAACTTTGAGTACGTTGTCCATTGTGATGTCTGACAAGGCCGAACATAGGAAAAAAATACAAAGAAGTATGGTTGCAGTGGTATTCATTAGCTACAGGGAAAGCCAGTTGTGTGAGTCCGATAAAAAGGACCTAGAAGTTAAAAGTTTCAACTTTCAAGTTCCTTTTAGTTACTTTCCTCCTGATAATAGAAGGAAAACTAAACTCCCTTCAGTCTTGCTGATTGCTTAGGCTGAGAAAACTGAAAAATAGTGAAAGCAACAAAATGAGTAGCGTAGCATTACAGGATAAATTTTTTATAGGTTAGTATTTGGAGGATTGTCATGAATTTTATTGCCTGGTGGGCACTACCTCTGCTTTTAGAAGGAACGTAATACTAATACATATATTTAAATAATCTATATGTATAGGATTGCAGGATAACTCTTTATAGGAGTAATATTGGGAGGATCAACACTAATTTTATTGTTTCACCACCTCTGCTTTTAGAAGGAAAGCAATTCATAGATTTAAATAATCTCCCAGTCGGAAAATTCATCATTTTGAATGGTGGATGGAGAAAACTTTACTATTTCTTTTGCTTTTGCTTTTTGGCTCTGCTTCCTTGATGGCCTTGATATATTTGCTCTAACATTCTTGTTTTCGATCTGAAAGAATGTCAAAGCGGGCAAGAAATATGAGTTGGTACCATGCGTTGGTAGAGAGCATTAATGTAAGCATTCATAAAGTCTATAAACAGTCTATCTTGATTTCTAATTTGAGTTTCTGTCTGGAATATCATGGATGGTAATGATGAGTTCCACATACTTCTTGGTTCGCTGAGAAATGGTTTGGTTCAATAGGAGGATGATTCTGTTTATCGGATGATTGAATTCAAACTCGGTCTTCTGTCTTGACAAGATGCTCCTCTGTAACAGTAAAATTCAATTATATGAATGATGTATGTAACGAAAGCATATGCTATTGCTCTTTTTCTTATTTCTCCGAAGCTGATGGATGTCCATTTACAGGTTTTTATGTCTGTGCCTATATCTCCTTTCTTTACAGGATATGACACTCAAGAATTAAAAAATATTATCATAGAAGCATCTGAAATCCTGATTCTTTCGAGAAATCCAAACATTGCCTAATCTGGTATGTTAAAATTCACTGCTTAAAACTATAGATAATATTATTGCTTTTTTTTTTTAATTATTGAACTTCAACCCACATTACCGTCCACATTTGCACGTTCCAGGAAAGAGAACCCACAACAATTACTGCATCTTTTCACTGGAAAATTTGCAAAAGAAGTAAATGGTGCCATTGTTGCAACTTAAGCCTAATTTAATTGTCAAACATCTACGTCTCCTAACCTTCTATGGATTTGAATTATTTTTTTCCTTTATTTGCAATGTAATATTATTTTAGAAAATAATAATGCTATCAGAGGGATAGGGTTTTCTAAACTACCAAGAAGAGTCCAAATAAGGAAATCATCACGATGTAGCTAGTGCGGAAAACCAAGAGAAAGACCCATTCCATAAATTTCAATCAGAATTACCTGTATCTTTACTAAGAGCACCCGCAGAAGATGCATCTTGATTTGCCCAATGTTCCTTCTCAGGAGACTGATCTTCTCCAACACCCAAATGTGGCTGTTGGAAGTGATCTTTTTCACTACCAACTGAATTTGGTTGCCCTTTTGCATATTTCAACAATTCCTGTTTCAAGAATGTGGAGTTGAATTACCGATTTTTAAGAACGTCACTGCTAGTCAAAGAGTTGGCAAATTGTGGAACTATAGGAATTGAACAAGAGATAGTAGTTTTACCTTCTCCAACACATCACACATCTCCAAGCACCTGCCCTCCATCTTCTTGAAGACATTAACAAACCAGTCCAAGCCATTAGAGCTTTGCCCCATGTTTAGATGAAGGAGATTAAAACTGATGTCCAAAACAATTGAGTGATTAAAAGGTTTCAATGTAAACCAATAAGCTAATTCAGATGGAAAGCAAATAGAGGAAGAAGAAAAAAACCCATGAACCTGATTGCAAGGAGTTGGTAGCAGAAGTAAAGTTAGAAGTAAAATCCTGAAGTTGCTTGAGAACCCGATTCTACTATTGCTAAACAAACTTCATAAAACGGGATGAGAGAGAAAATGGTGCGAGAGAAAGCCTTGGCAGTGAGTGTCCAAAAAGGACGAAACGACAATTACCTAAAAGAGTTCAGGGAAGAGAAGGCCCCATGTAAGGAGTCTACTGAAATATTTACAGTATATTCTCTTTATTTACCTGTACCTTTTCAATATTTTCTCAACTTATTTCATCATCATTTTATCTTTCCTAAAATTTTAAAGGGACGTTCGGCTTTGGCAATTGATTCATTTCAGATGGATGAGAACTTTTTACCACTTTAGAAGATAATATCATAATGTAAATGAATTGAAGGTGAAGGTAATAATGAGGTGAGGATTTGAAGCTCTAATATATATCTTAAGT

mRNA sequence

GCAGAATTAGCTGAAAGGGGGAAAAACACAGTCTAACAATGGCAGCGATATCGGTATTATCGTCCCCATGGGTTTCCACTGGAGCCATTGCCGTCCGCGTTCCTTCAGCTTCTCTTGTAATCTCAACTGGTTCTAGAGGTTGCTGCTCCGTATCTCTGAATACCGCCAACAACACTTCCGCCCGTTCTGGACTACTCCATTGTTCATTTCTTCCATCTTCCTCCCTCTCCTGCTCTTCATCTTTTTCAGGTTTATCTTTGGGTTTGGATTGGAGCACTAAGATTGGGGTCGGACAAGGGAAGGGTCGGAGCTTAGTGGTTAGGGCTGGCAAGGCTGCACTATGTCAGACTAAAAGAAACAGGTCACGTAAATCCTTAGCTCGGACTCATGGGTTTCGCAGACGAATGCGAACCACCAATGGTAGAGCTGTTCTCAAGCGCAGACGTGCCAAGGGTAGGAAGGTCCTCTGCACAAAGTCCAACCCTAGCAGCGGAAAGCGTGCTTAAGTTTTTCTCGCTTTAACCATTTTTAGGTTAATTAGGCAATGTTGTCTAATTCACTCTTCCAATGACTGGTCAAGGTAGCTCACTATATTACATGATGCTTTGTTATTGATTCATTTGAAAGTTTCTTAATTGCAATGTTAAATTCAAATGTCCTGACGGGACAAGCTTATGTGATTGATGCGTTTGTATTCTTCATTTGAAAATCTCCTCTGAACTGAAATATGTACATCTTCTTAAAACCTGAGGTTTGTATTTGTTGCTACTAACCTAATACTAGGTCATCTCGTCATTCATTTTTAGGCCTGAAATCTGATTTGTATCAGTTTCTCTCTAGTATTGTCTTTGTTTGAGCTACTCTGTAGCTTTTCATGTCAAAACACAATTGTTATTGACATTTCAACTTTGAGTACGTTGTCCATTGTGATGTCTGACAAGGCCGAACATAGGAAAAAAATACAAAGAAGTATGGTTGCAGTGGTATTCATTAGCTACAGGGAAAGCCAGTTGTGTGAGTCCGATAAAAAGGACCTAGAAGTTAAAAGTTTCAACTTTCAAGTTCCTTTTAGTTACTTTCCTCCTGATAATAGAAGGAAAACTAAACTCCCTTCAGTCTTGCTGATTGCTTAGGCTGAGAAAACTGAAAAATAGTGAAAGCAACAAAATGAGTAGCGTAGCATTACAGGATAAATTTTTTATAGGTTAGTATTTGGAGGATTGTCATGAATTTTATTGCCTGGTGGGCACTACCTCTGCTTTTAGAAGGAACGTAATACTAATACATATATTTAAATAATCTATATGTATAGGATTGCAGGATAACTCTTTATAGGAGTAATATTGGGAGGATCAACACTAATTTTATTGTTTCACCACCTCTGCTTTTAGAAGGAAAGCAATTCATAGATTTAAATAATCTCCCAGTCGGAAAATTCATCATTTTGAATGGTGGATGGAGAAAACTTTACTATTTCTTTTGCTTTTGCTTTTTGGCTCTGCTTCCTTGATGGCCTTGATATATTTGCTCTAACATTCTTGTTTTCGATCTGAAAGAATGTCAAAGCGGGCAAGAAATATGAGTTGGTACCATGCGTTGGTAGAGAGCATTAATGTAAGCATTCATAAAGTCTATAAACAGTCTATCTTGATTTCTAATTTGAGTTTCTGTCTGGAATATCATGGATGGTAATGATGAGTTCCACATACTTCTTGGTTCGCTGAGAAATGGTTTGGTTCAATAGGAGGATGATTCTGTTTATCGGATGATTGAATTCAAACTCGGTCTTCTGTCTTGACAAGATGCTCCTCTGTAACAGTAAAATTCAATTATATGAATGATGTTTTTATGTCTGTGCCTATATCTCCTTTCTTTACAGGATATGACACTCAAGAATTAAAAAATATTATCATAGAAGCATCTGAAATCCTGATTCTTTCGAGAAATCCAAACATTGCCTAATCTGGAAAGAGAACCCACAACAATTACTGCATCTTTTCACTGGAAAATTTGCAAAAGAAGTAAATGGTGCCATTGTTGCAACTTAAGCCTAATTTAATTGTCAAACATCTACGTCTCCTAACCTTCTATGGATTTGAATTATTTTTTTCCTTTATTTGCAATGTAATATTATTTTAGAAAATAATAATGCTATCAGAGGGATAGGGTTTTCTAAACTACCAAGAAGAGTCCAAATAAGGAAATCATCACGATGTAGCTAGTGCGGAAAACCAAGAGAAAGACCCATTCCATAAATTTCAATCAGAATTACCTGTATCTTTACTAAGAGCACCCGCAGAAGATGCATCTTGATTTGCCCAATGTTCCTTCTCAGGAGACTGATCTTCTCCAACACCCAAATGTGGCTGTTGGAAGTGATCTTTTTCACTACCAACTGAATTTGGTTGCCCTTTTGCATATTTCAACAATTCCTGTTTCAAGAATGTGGAGTTGAATTACCGATTTTTAAGAACGTCACTGCTAGTCAAAGAGTTGGCAAATTGTGGAACTATAGGAATTGAACAAGAGATAGTAGTTTTACCTTCTCCAACACATCACACATCTCCAAGCACCTGCCCTCCATCTTCTTGAAGACATTAACAAACCAGTCCAAGCCATTAGAGCTTTGCCCCATGTTTAGATGAAGGAGATTAAAACTGATGTCCAAAACAATTGAGTGATTAAAAGGTTTCAATGTAAACCAATAAGCTAATTCAGATGGAAAGCAAATAGAGGAAGAAGAAAAAAACCCATGAACCTGATTGCAAGGAGTTGGTAGCAGAAGTAAAGTTAGAAGTAAAATCCTGAAGTTGCTTGAGAACCCGATTCTACTATTGCTAAACAAACTTCATAAAACGGGATGAGAGAGAAAATGGTGCGAGAGAAAGCCTTGGCAGTGAGTGTCCAAAAAGGACGAAACGACAATTACCTAAAAGAGTTCAGGGAAGAGAAGGCCCCATGGACGTTCGGCTTTGGCAATTGATTCATTTCAGATGGATGAGAACTTTTTACCACTTTAGAAGATAATATCATAATGTAAATGAATTGAAGGTGAAGGTAATAATGAGGTGAGGATTTGAAGCTCTAATATATATCTTAAGT

Coding sequence (CDS)

ATGGCAGCGATATCGGTATTATCGTCCCCATGGGTTTCCACTGGAGCCATTGCCGTCCGCGTTCCTTCAGCTTCTCTTGTAATCTCAACTGGTTCTAGAGGTTGCTGCTCCGTATCTCTGAATACCGCCAACAACACTTCCGCCCGTTCTGGACTACTCCATTGTTCATTTCTTCCATCTTCCTCCCTCTCCTGCTCTTCATCTTTTTCAGGTTTATCTTTGGGTTTGGATTGGAGCACTAAGATTGGGGTCGGACAAGGGAAGGGTCGGAGCTTAGTGGTTAGGGCTGGCAAGGCTGCACTATGTCAGACTAAAAGAAACAGGTCACGTAAATCCTTAGCTCGGACTCATGGGTTTCGCAGACGAATGCGAACCACCAATGGTAGAGCTGTTCTCAAGCGCAGACGTGCCAAGGGTAGGAAGGTCCTCTGCACAAAGTCCAACCCTAGCAGCGGAAAGCGTGCTTAA

Protein sequence

MAAISVLSSPWVSTGAIAVRVPSASLVISTGSRGCCSVSLNTANNTSARSGLLHCSFLPSSSLSCSSSFSGLSLGLDWSTKIGVGQGKGRSLVVRAGKAALCQTKRNRSRKSLARTHGFRRRMRTTNGRAVLKRRRAKGRKVLCTKSNPSSGKRA
Homology
[Close]
BLAST of PI0012977 vs. ExPASy Swiss-Prot
Match: P82244 (50S ribosomal protein L34, chloroplastic OS=Spinacia oleracea OX=3562 GN=RPL34 PE=1 SV=1)

HSP 1 Score: 150.2 bits (378), Expect = 1.9e-35
Identity = 103/156 (66.03%), Postives = 117/156 (75.00%), Query Frame = 0 

Query: 1   MAAISVLSSPWVSTGAIAVRVPSASLVISTGSRGCCSVSLNTANNTSARSGLLHCSFL-P 60
           MA +S+LS+      AI  R PSASL   TGSR   +    + N  SARSG LHCSFL P
Sbjct: 1   MATLSLLSTG--VGAAITNRTPSASLTFITGSR--TTNKRVSFNGGSARSGSLHCSFLAP 60

Query: 61  SSSLSCSSSFSGLSLGLDWSTKIGVGQGKGRSLVVRAGKAALCQTKRNRSRKSLARTHGF 120
           SSSL  SS+FSGLSLGLD ++  GV   + R  VVRAGKAALC TKR+RSRKSLARTHGF
Sbjct: 61  SSSL--SSNFSGLSLGLDLTSNTGVSTDRCRRFVVRAGKAALCLTKRSRSRKSLARTHGF 120

Query: 121 RRRMRTTNGRAVLKRRRAKGRKVLCTKSNPSSGKRA 156
           R RM TT+GRA+LKRRRAKGRK+LCTK+NPSSGKRA
Sbjct: 121 RLRMSTTSGRALLKRRRAKGRKILCTKTNPSSGKRA 150

[Close]
BLAST of PI0012977 vs. ExPASy Swiss-Prot
Match: Q9LP37 (50S ribosomal protein L34, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RPL34 PE=2 SV=1)

HSP 1 Score: 135.6 bits (340), Expect = 4.9e-31
Identity = 97/155 (62.58%), Postives = 112/155 (72.26%), Query Frame = 0 

Query: 2   AAISVLSSPWVSTGAIAVRVPSASLVISTGSRGCCSVSLNTANNTSARSGLLHCSFLPSS 61
           +A S L +P  S G I   VPSASL + TG R   S     +  +SA S LLHCSFL SS
Sbjct: 11  SASSRLWNPAASNGKIC--VPSASLSLRTGCRRSSS-----SLTSSASSQLLHCSFL-SS 70

Query: 62  SLSCSSSFSGLSLGLDWSTKI-GVGQGKGRSLVVRAGKAALCQTKRNRSRKSLARTHGFR 121
            +S +S FSGLS+  D S++  G+   + R LVVRAGKAALCQTKR+RSRKSLARTHGFR
Sbjct: 71  PVSLASPFSGLSIAFDLSSQTSGLNGQRRRGLVVRAGKAALCQTKRSRSRKSLARTHGFR 130

Query: 122 RRMRTTNGRAVLKRRRAKGRKVLCTKSNPSSGKRA 156
           RRMRTT+GRA +KRRRAKGR  LC KSNPSSGKRA
Sbjct: 131 RRMRTTSGRATIKRRRAKGRWNLCPKSNPSSGKRA 157

[Close]
BLAST of PI0012977 vs. ExPASy TrEMBL
Match: A0A5D3CSJ7 (50S ribosomal protein L34 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G008120 PE=3 SV=1)

HSP 1 Score: 272.7 bits (696), Expect = 9.4e-70
Identity = 151/155 (97.42%), Postives = 153/155 (98.71%), Query Frame = 0 

Query: 1   MAAISVLSSPWVSTGAIAVRVPSASLVISTGSRGCCSVSLNTANNTSARSGLLHCSFLPS 60
           MAAISVLSSPWVS GAIAVRVPSASLVISTGSRG CSVSLNTANNTSARSGLLHCSFLPS
Sbjct: 1   MAAISVLSSPWVSNGAIAVRVPSASLVISTGSRGSCSVSLNTANNTSARSGLLHCSFLPS 60

Query: 61  SSLSCSSSFSGLSLGLDWSTKIGVGQGKGRSLVVRAGKAALCQTKRNRSRKSLARTHGFR 120
           SSLSCSSSFSGLSLGLDWS+K+GVGQGKGRSLVVRAGKAALCQTKRNRSRKSLARTHGFR
Sbjct: 61  SSLSCSSSFSGLSLGLDWSSKVGVGQGKGRSLVVRAGKAALCQTKRNRSRKSLARTHGFR 120

Query: 121 RRMRTTNGRAVLKRRRAKGRKVLCTKSNPSSGKRA 156
           RRMRTTNGRAVLKRRRAKGRKVLCTKSNPSSGKRA
Sbjct: 121 RRMRTTNGRAVLKRRRAKGRKVLCTKSNPSSGKRA 155

[Close]
BLAST of PI0012977 vs. ExPASy TrEMBL
Match: A0A1S3AZG6 (50S ribosomal protein L34, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103484452 PE=3 SV=1)

HSP 1 Score: 272.7 bits (696), Expect = 9.4e-70
Identity = 151/155 (97.42%), Postives = 153/155 (98.71%), Query Frame = 0 

Query: 1   MAAISVLSSPWVSTGAIAVRVPSASLVISTGSRGCCSVSLNTANNTSARSGLLHCSFLPS 60
           MAAISVLSSPWVS GAIAVRVPSASLVISTGSRG CSVSLNTANNTSARSGLLHCSFLPS
Sbjct: 1   MAAISVLSSPWVSNGAIAVRVPSASLVISTGSRGSCSVSLNTANNTSARSGLLHCSFLPS 60

Query: 61  SSLSCSSSFSGLSLGLDWSTKIGVGQGKGRSLVVRAGKAALCQTKRNRSRKSLARTHGFR 120
           SSLSCSSSFSGLSLGLDWS+K+GVGQGKGRSLVVRAGKAALCQTKRNRSRKSLARTHGFR
Sbjct: 61  SSLSCSSSFSGLSLGLDWSSKVGVGQGKGRSLVVRAGKAALCQTKRNRSRKSLARTHGFR 120

Query: 121 RRMRTTNGRAVLKRRRAKGRKVLCTKSNPSSGKRA 156
           RRMRTTNGRAVLKRRRAKGRKVLCTKSNPSSGKRA
Sbjct: 121 RRMRTTNGRAVLKRRRAKGRKVLCTKSNPSSGKRA 155

[Close]
BLAST of PI0012977 vs. ExPASy TrEMBL
Match: A0A0A0KI92 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G519510 PE=3 SV=1)

HSP 1 Score: 266.5 bits (680), Expect = 6.7e-68
Identity = 147/155 (94.84%), Postives = 150/155 (96.77%), Query Frame = 0 

Query: 1   MAAISVLSSPWVSTGAIAVRVPSASLVISTGSRGCCSVSLNTANNTSARSGLLHCSFLPS 60
           MAAISVLS+PWVSTGAIAVRVPSASLV STGSRG CSVSLNT NN SARSGLLHCSFLPS
Sbjct: 1   MAAISVLSTPWVSTGAIAVRVPSASLVFSTGSRGYCSVSLNTVNNNSARSGLLHCSFLPS 60

Query: 61  SSLSCSSSFSGLSLGLDWSTKIGVGQGKGRSLVVRAGKAALCQTKRNRSRKSLARTHGFR 120
           SSLSCSSSFSGLSLGLDWS+K+GVGQGKGR LVVRAGKAALCQTKRNRSRKSLARTHGFR
Sbjct: 61  SSLSCSSSFSGLSLGLDWSSKVGVGQGKGRGLVVRAGKAALCQTKRNRSRKSLARTHGFR 120

Query: 121 RRMRTTNGRAVLKRRRAKGRKVLCTKSNPSSGKRA 156
           RRMRTTNGRAVLKRRRAKGRKVLCTKSNPSSGKRA
Sbjct: 121 RRMRTTNGRAVLKRRRAKGRKVLCTKSNPSSGKRA 155

[Close]
BLAST of PI0012977 vs. ExPASy TrEMBL
Match: A0A6J1CMH5 (50S ribosomal protein L34, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111012484 PE=3 SV=1)

HSP 1 Score: 253.4 bits (646), Expect = 5.9e-64
Identity = 141/155 (90.97%), Postives = 148/155 (95.48%), Query Frame = 0 

Query: 1   MAAISVLSSPWVSTGAIAVRVPSASLVISTGSRGCCSVSLNTANNTSARSGLLHCSFLPS 60
           MAAISVLS+PWV +GA+AVRVPSASLVISTGSR CCSVSLNTANNTSARSGLL CSFLPS
Sbjct: 1   MAAISVLSTPWVLSGAVAVRVPSASLVISTGSRSCCSVSLNTANNTSARSGLLRCSFLPS 60

Query: 61  SSLSCSSSFSGLSLGLDWSTKIGVGQGKGRSLVVRAGKAALCQTKRNRSRKSLARTHGFR 120
           SSLSCSSSFSG SLGLDW+++I VGQGKGRSLVVRAGKAALCQTKRNRSRKSLARTHGFR
Sbjct: 61  SSLSCSSSFSGFSLGLDWNSRIWVGQGKGRSLVVRAGKAALCQTKRNRSRKSLARTHGFR 120

Query: 121 RRMRTTNGRAVLKRRRAKGRKVLCTKSNPSSGKRA 156
           RRMRTT+GRAVLKRRRAKGRKVLCTKS PSSGK A
Sbjct: 121 RRMRTTSGRAVLKRRRAKGRKVLCTKSYPSSGKGA 155

[Close]
BLAST of PI0012977 vs. ExPASy TrEMBL
Match: A0A5A7UBQ8 (50S ribosomal protein L34 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold120G002370 PE=3 SV=1)

HSP 1 Score: 235.7 bits (600), Expect = 1.3e-58
Identity = 135/155 (87.10%), Postives = 137/155 (88.39%), Query Frame = 0 

Query: 1   MAAISVLSSPWVSTGAIAVRVPSASLVISTGSRGCCSVSLNTANNTSARSGLLHCSFLPS 60
           MAAISVLSSPWVS GAIAVRVPSASLVISTGSRG CSVSLNTANNTSARSGLLHC     
Sbjct: 1   MAAISVLSSPWVSNGAIAVRVPSASLVISTGSRGSCSVSLNTANNTSARSGLLHC----- 60

Query: 61  SSLSCSSSFSGLSLGLDWSTKIGVGQGKGRSLVVRAGKAALCQTKRNRSRKSLARTHGFR 120
                      LSLGLDWS+K+GVGQGKGRSLVVRAGKAALCQTKRNRSRKSLARTHGFR
Sbjct: 61  -----------LSLGLDWSSKVGVGQGKGRSLVVRAGKAALCQTKRNRSRKSLARTHGFR 120

Query: 121 RRMRTTNGRAVLKRRRAKGRKVLCTKSNPSSGKRA 156
           RRMRTTNGRAVLKRRRAKGRKVLCTKSNPSSGKRA
Sbjct: 121 RRMRTTNGRAVLKRRRAKGRKVLCTKSNPSSGKRA 139

[Close]
BLAST of PI0012977 vs. NCBI nr
Match: XP_008439748.1 (PREDICTED: 50S ribosomal protein L34, chloroplastic [Cucumis melo] >TYK13199.1 50S ribosomal protein L34 [Cucumis melo var. makuwa])

HSP 1 Score: 272.7 bits (696), Expect = 1.9e-69
Identity = 151/155 (97.42%), Postives = 153/155 (98.71%), Query Frame = 0 

Query: 1   MAAISVLSSPWVSTGAIAVRVPSASLVISTGSRGCCSVSLNTANNTSARSGLLHCSFLPS 60
           MAAISVLSSPWVS GAIAVRVPSASLVISTGSRG CSVSLNTANNTSARSGLLHCSFLPS
Sbjct: 1   MAAISVLSSPWVSNGAIAVRVPSASLVISTGSRGSCSVSLNTANNTSARSGLLHCSFLPS 60

Query: 61  SSLSCSSSFSGLSLGLDWSTKIGVGQGKGRSLVVRAGKAALCQTKRNRSRKSLARTHGFR 120
           SSLSCSSSFSGLSLGLDWS+K+GVGQGKGRSLVVRAGKAALCQTKRNRSRKSLARTHGFR
Sbjct: 61  SSLSCSSSFSGLSLGLDWSSKVGVGQGKGRSLVVRAGKAALCQTKRNRSRKSLARTHGFR 120

Query: 121 RRMRTTNGRAVLKRRRAKGRKVLCTKSNPSSGKRA 156
           RRMRTTNGRAVLKRRRAKGRKVLCTKSNPSSGKRA
Sbjct: 121 RRMRTTNGRAVLKRRRAKGRKVLCTKSNPSSGKRA 155

[Close]
BLAST of PI0012977 vs. NCBI nr
Match: XP_038883793.1 (50S ribosomal protein L34, chloroplastic [Benincasa hispida])

HSP 1 Score: 271.6 bits (693), Expect = 4.3e-69
Identity = 151/155 (97.42%), Postives = 152/155 (98.06%), Query Frame = 0 

Query: 1   MAAISVLSSPWVSTGAIAVRVPSASLVISTGSRGCCSVSLNTANNTSARSGLLHCSFLPS 60
           MAAISVLSSPWVSTGA AVRVPSASLVISTG RGCCSVSLNTANNTSARSGLLHCSFL S
Sbjct: 1   MAAISVLSSPWVSTGATAVRVPSASLVISTGFRGCCSVSLNTANNTSARSGLLHCSFLSS 60

Query: 61  SSLSCSSSFSGLSLGLDWSTKIGVGQGKGRSLVVRAGKAALCQTKRNRSRKSLARTHGFR 120
           SSLSCSSSFSGLSLGLDWS+KIGVGQGKGRSLVVRAGKAALCQTKRNRSRKSLARTHGFR
Sbjct: 61  SSLSCSSSFSGLSLGLDWSSKIGVGQGKGRSLVVRAGKAALCQTKRNRSRKSLARTHGFR 120

Query: 121 RRMRTTNGRAVLKRRRAKGRKVLCTKSNPSSGKRA 156
           RRMRTTNGRAVLKRRRAKGRKVLCTKSNPSSGKRA
Sbjct: 121 RRMRTTNGRAVLKRRRAKGRKVLCTKSNPSSGKRA 155

[Close]
BLAST of PI0012977 vs. NCBI nr
Match: XP_004134668.1 (50S ribosomal protein L34, chloroplastic [Cucumis sativus] >KGN49298.1 hypothetical protein Csa_003653 [Cucumis sativus])

HSP 1 Score: 266.5 bits (680), Expect = 1.4e-67
Identity = 147/155 (94.84%), Postives = 150/155 (96.77%), Query Frame = 0 

Query: 1   MAAISVLSSPWVSTGAIAVRVPSASLVISTGSRGCCSVSLNTANNTSARSGLLHCSFLPS 60
           MAAISVLS+PWVSTGAIAVRVPSASLV STGSRG CSVSLNT NN SARSGLLHCSFLPS
Sbjct: 1   MAAISVLSTPWVSTGAIAVRVPSASLVFSTGSRGYCSVSLNTVNNNSARSGLLHCSFLPS 60

Query: 61  SSLSCSSSFSGLSLGLDWSTKIGVGQGKGRSLVVRAGKAALCQTKRNRSRKSLARTHGFR 120
           SSLSCSSSFSGLSLGLDWS+K+GVGQGKGR LVVRAGKAALCQTKRNRSRKSLARTHGFR
Sbjct: 61  SSLSCSSSFSGLSLGLDWSSKVGVGQGKGRGLVVRAGKAALCQTKRNRSRKSLARTHGFR 120

Query: 121 RRMRTTNGRAVLKRRRAKGRKVLCTKSNPSSGKRA 156
           RRMRTTNGRAVLKRRRAKGRKVLCTKSNPSSGKRA
Sbjct: 121 RRMRTTNGRAVLKRRRAKGRKVLCTKSNPSSGKRA 155

[Close]
BLAST of PI0012977 vs. NCBI nr
Match: XP_022142342.1 (50S ribosomal protein L34, chloroplastic [Momordica charantia])

HSP 1 Score: 253.4 bits (646), Expect = 1.2e-63
Identity = 141/155 (90.97%), Postives = 148/155 (95.48%), Query Frame = 0 

Query: 1   MAAISVLSSPWVSTGAIAVRVPSASLVISTGSRGCCSVSLNTANNTSARSGLLHCSFLPS 60
           MAAISVLS+PWV +GA+AVRVPSASLVISTGSR CCSVSLNTANNTSARSGLL CSFLPS
Sbjct: 1   MAAISVLSTPWVLSGAVAVRVPSASLVISTGSRSCCSVSLNTANNTSARSGLLRCSFLPS 60

Query: 61  SSLSCSSSFSGLSLGLDWSTKIGVGQGKGRSLVVRAGKAALCQTKRNRSRKSLARTHGFR 120
           SSLSCSSSFSG SLGLDW+++I VGQGKGRSLVVRAGKAALCQTKRNRSRKSLARTHGFR
Sbjct: 61  SSLSCSSSFSGFSLGLDWNSRIWVGQGKGRSLVVRAGKAALCQTKRNRSRKSLARTHGFR 120

Query: 121 RRMRTTNGRAVLKRRRAKGRKVLCTKSNPSSGKRA 156
           RRMRTT+GRAVLKRRRAKGRKVLCTKS PSSGK A
Sbjct: 121 RRMRTTSGRAVLKRRRAKGRKVLCTKSYPSSGKGA 155

[Close]
BLAST of PI0012977 vs. NCBI nr
Match: KAA0052628.1 (50S ribosomal protein L34 [Cucumis melo var. makuwa])

HSP 1 Score: 235.7 bits (600), Expect = 2.6e-58
Identity = 135/155 (87.10%), Postives = 137/155 (88.39%), Query Frame = 0 

Query: 1   MAAISVLSSPWVSTGAIAVRVPSASLVISTGSRGCCSVSLNTANNTSARSGLLHCSFLPS 60
           MAAISVLSSPWVS GAIAVRVPSASLVISTGSRG CSVSLNTANNTSARSGLLHC     
Sbjct: 1   MAAISVLSSPWVSNGAIAVRVPSASLVISTGSRGSCSVSLNTANNTSARSGLLHC----- 60

Query: 61  SSLSCSSSFSGLSLGLDWSTKIGVGQGKGRSLVVRAGKAALCQTKRNRSRKSLARTHGFR 120
                      LSLGLDWS+K+GVGQGKGRSLVVRAGKAALCQTKRNRSRKSLARTHGFR
Sbjct: 61  -----------LSLGLDWSSKVGVGQGKGRSLVVRAGKAALCQTKRNRSRKSLARTHGFR 120

Query: 121 RRMRTTNGRAVLKRRRAKGRKVLCTKSNPSSGKRA 156
           RRMRTTNGRAVLKRRRAKGRKVLCTKSNPSSGKRA
Sbjct: 121 RRMRTTNGRAVLKRRRAKGRKVLCTKSNPSSGKRA 139

[Close]
BLAST of PI0012977 vs. TAIR 10
Match: AT1G29070.1 (Ribosomal protein L34 )

HSP 1 Score: 135.6 bits (340), Expect = 3.5e-32
Identity = 97/155 (62.58%), Postives = 112/155 (72.26%), Query Frame = 0 

Query: 2   AAISVLSSPWVSTGAIAVRVPSASLVISTGSRGCCSVSLNTANNTSARSGLLHCSFLPSS 61
           +A S L +P  S G I   VPSASL + TG R   S     +  +SA S LLHCSFL SS
Sbjct: 11  SASSRLWNPAASNGKIC--VPSASLSLRTGCRRSSS-----SLTSSASSQLLHCSFL-SS 70

Query: 62  SLSCSSSFSGLSLGLDWSTKI-GVGQGKGRSLVVRAGKAALCQTKRNRSRKSLARTHGFR 121
            +S +S FSGLS+  D S++  G+   + R LVVRAGKAALCQTKR+RSRKSLARTHGFR
Sbjct: 71  PVSLASPFSGLSIAFDLSSQTSGLNGQRRRGLVVRAGKAALCQTKRSRSRKSLARTHGFR 130

Query: 122 RRMRTTNGRAVLKRRRAKGRKVLCTKSNPSSGKRA 156
           RRMRTT+GRA +KRRRAKGR  LC KSNPSSGKRA
Sbjct: 131 RRMRTTSGRATIKRRRAKGRWNLCPKSNPSSGKRA 157

The following BLAST results are available for this feature:
BLAST of PI0012977 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
P822441.9e-3566.0350S ribosomal protein L34, chloroplastic OS=Spinacia oleracea OX=3562 GN=RPL34 P... [more]
Q9LP374.9e-3162.5850S ribosomal protein L34, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RPL3... [more]
BLAST of PI0012977 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5D3CSJ79.4e-7097.4250S ribosomal protein L34 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo... [more]
A0A1S3AZG69.4e-7097.4250S ribosomal protein L34, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103484452... [more]
A0A0A0KI926.7e-6894.84Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G519510 PE=3 SV=1[more]
A0A6J1CMH55.9e-6490.9750S ribosomal protein L34, chloroplastic OS=Momordica charantia OX=3673 GN=LOC11... [more]
A0A5A7UBQ81.3e-5887.1050S ribosomal protein L34 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffo... [more]
BLAST of PI0012977 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_008439748.11.9e-6997.42PREDICTED: 50S ribosomal protein L34, chloroplastic [Cucumis melo] >TYK13199.1 5... [more]
XP_038883793.14.3e-6997.4250S ribosomal protein L34, chloroplastic [Benincasa hispida][more]
XP_004134668.11.4e-6794.8450S ribosomal protein L34, chloroplastic [Cucumis sativus] >KGN49298.1 hypotheti... [more]
XP_022142342.11.2e-6390.9750S ribosomal protein L34, chloroplastic [Momordica charantia][more]
KAA0052628.12.6e-5887.1050S ribosomal protein L34 [Cucumis melo var. makuwa][more]
BLAST of PI0012977 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G29070.13.5e-3262.58Ribosomal protein L34 [more]
InterPro
Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000271Ribosomal protein L34PFAMPF00468Ribosomal_L34coord: 109..144
e-value: 2.1E-12
score: 46.8
IPR000271Ribosomal protein L34TIGRFAMTIGR01030TIGR01030coord: 110..143
e-value: 3.9E-11
score: 41.0
IPR000271Ribosomal protein L34PANTHERPTHR14503MITOCHONDRIAL RIBOSOMAL PROTEIN 34 FAMILY MEMBERcoord: 13..154
IPR000271Ribosomal protein L34HAMAPMF_00391Ribosomal_L34coord: 97..145
score: 12.617811
NoneNo IPR availableGENE3D1.10.287.3980coord: 97..155
e-value: 2.0E-26
score: 93.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 136..155
NoneNo IPR availablePANTHERPTHR14503:SF9BNAC06G17900D PROTEINcoord: 13..154

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
PI0012977.1PI0012977.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006412 translation
cellular_component GO:0005762 mitochondrial large ribosomal subunit
cellular_component GO:0005840 ribosome
molecular_function GO:0003735 structural constituent of ribosome