PI0012962 (gene) Melon (PI 482460) v1

Overview


Name	PI0012962
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Protein MNN4-like
Location	chr04: 18330256 .. 18330951 (+)
RNA-Seq Expression	PI0012962
Synteny	PI0012962

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTTGCGTCTTCTGAAAAAACAAACCAACACCATCAAGAGGTATTTGACCTCAAAGCTAACCCCATCACGCGAAGAAACAGAAGCCAAAGGAAAGAAGTTGGGTTGGCGGCCTTGAAGCAACTTCAGACCGAAAGCCTCTACGCGGACTTGAAGGATGAAGATGTTGCGGATATGGTAGATCTTCTGGCCGCAAAGATGGAAGCCAAAAAAGAAAAGAAGAAAGAAGAAGAAAGGAAAGCAGAAGAGGATCATCACAAGCTACGCGACGAAGAGAATAGGCGGAGAGAGGAAGAGTTAAAAAGGAAACAAGTTGAAGCCTCTTCGCCTATTGCGGAAACTGAGTTCCAGAGGGTGGCGAAGAGAACCCTCAAGAAGAAGGAGAAAGTGGCCGAAGCATTTACAAAGGCCAGAGAAGCTACAAAGCGAGTTAGGGAGCTCGTGCAAATAAGAAAAGATGAAAGGTTGCGAGAGCAAGAAGAGCTCCACAACAAAGTGGAGGAAATCGCATCCTTGGCAGACAAGGGCAAGGCAACAAGGACCTTCAGCGATGAGATGGCTGAGGAATTCGACAAAGAACTAGAGGAGATGAGCCCTCTAGAGGATGAAGTCATTAAGCCCGCCAAGACTCGGATAGTAACAATGAAGAAAAAGGTCCTCGTGGGACAAATGGCGAAGAGAAGAGAAGAAAGATGA

mRNA sequence

ATGGTTGCGTCTTCTGAAAAAACAAACCAACACCATCAAGAGGTATTTGACCTCAAAGCTAACCCCATCACGCGAAGAAACAGAAGCCAAAGGAAAGAAGTTGGGTTGGCGGCCTTGAAGCAACTTCAGACCGAAAGCCTCTACGCGGACTTGAAGGATGAAGATGTTGCGGATATGGTAGATCTTCTGGCCGCAAAGATGGAAGCCAAAAAAGAAAAGAAGAAAGAAGAAGAAAGGAAAGCAGAAGAGGATCATCACAAGCTACGCGACGAAGAGAATAGGCGGAGAGAGGAAGAGTTAAAAAGGAAACAAGTTGAAGCCTCTTCGCCTATTGCGGAAACTGAGTTCCAGAGGGTGGCGAAGAGAACCCTCAAGAAGAAGGAGAAAGTGGCCGAAGCATTTACAAAGGCCAGAGAAGCTACAAAGCGAGTTAGGGAGCTCGTGCAAATAAGAAAAGATGAAAGGTTGCGAGAGCAAGAAGAGCTCCACAACAAAGTGGAGGAAATCGCATCCTTGGCAGACAAGGGCAAGGCAACAAGGACCTTCAGCGATGAGATGGCTGAGGAATTCGACAAAGAACTAGAGGAGATGAGCCCTCTAGAGGATGAAGTCATTAAGCCCGCCAAGACTCGGATAGTAACAATGAAGAAAAAGGTCCTCGTGGGACAAATGGCGAAGAGAAGAGAAGAAAGATGA

Coding sequence (CDS)

ATGGTTGCGTCTTCTGAAAAAACAAACCAACACCATCAAGAGGTATTTGACCTCAAAGCTAACCCCATCACGCGAAGAAACAGAAGCCAAAGGAAAGAAGTTGGGTTGGCGGCCTTGAAGCAACTTCAGACCGAAAGCCTCTACGCGGACTTGAAGGATGAAGATGTTGCGGATATGGTAGATCTTCTGGCCGCAAAGATGGAAGCCAAAAAAGAAAAGAAGAAAGAAGAAGAAAGGAAAGCAGAAGAGGATCATCACAAGCTACGCGACGAAGAGAATAGGCGGAGAGAGGAAGAGTTAAAAAGGAAACAAGTTGAAGCCTCTTCGCCTATTGCGGAAACTGAGTTCCAGAGGGTGGCGAAGAGAACCCTCAAGAAGAAGGAGAAAGTGGCCGAAGCATTTACAAAGGCCAGAGAAGCTACAAAGCGAGTTAGGGAGCTCGTGCAAATAAGAAAAGATGAAAGGTTGCGAGAGCAAGAAGAGCTCCACAACAAAGTGGAGGAAATCGCATCCTTGGCAGACAAGGGCAAGGCAACAAGGACCTTCAGCGATGAGATGGCTGAGGAATTCGACAAAGAACTAGAGGAGATGAGCCCTCTAGAGGATGAAGTCATTAAGCCCGCCAAGACTCGGATAGTAACAATGAAGAAAAAGGTCCTCGTGGGACAAATGGCGAAGAGAAGAGAAGAAAGATGA

Protein sequence

MVASSEKTNQHHQEVFDLKANPITRRNRSQRKEVGLAALKQLQTESLYADLKDEDVADMVDLLAAKMEAKKEKKKEEERKAEEDHHKLRDEENRRREEELKRKQVEASSPIAETEFQRVAKRTLKKKEKVAEAFTKAREATKRVRELVQIRKDERLREQEELHNKVEEIASLADKGKATRTFSDEMAEEFDKELEEMSPLEDEVIKPAKTRIVTMKKKVLVGQMAKRREER

Homology

[Close]

BLAST of PI0012962 vs. ExPASy TrEMBL
Match: A0A5D3BNL6 (Protein MNN4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1923G00100 PE=4 SV=1)

HSP 1 Score: 94.7 bits (234), Expect = 5.2e-16
Identity = 69/170 (40.59%), Postives = 112/170 (65.88%), Query Frame = 0


Query: 50  DLKDEDVADMVDLLAAKMEAKKEK---------KKEEERKA---EEDHHKLRDEENRRRE 109
           ++ +EDVAD+++L   + +A+++K         ++E+ERKA   E++  K R+EE RRR+
Sbjct: 12  NVDEEDVADVLELAKTRKKAREKKEEKERREKERREKERKAKEKEKERRKKRNEEERRRK 71

Query: 110 EEL----KRKQVEASSPIAETEFQRVAKRTLKKKEKVAEAFTKAREATKRVRELVQIRKD 169
           EEL    K+++V++S  IA TEF+RVA++  KKKEKV     K +   +  + L Q +K+
Sbjct: 72  EELKKQGKKEKVQSSPSIAPTEFERVARKAQKKKEKVVSGLLKMKVIVQGAKALTQEKKE 131

Query: 170 ERLREQEELHNKVEEIASLADKGKATRTFSDEMAEEFDKELEEMSPLEDE 204
            +LREQEEL NK++++   A K K   T S+E+ EEF +EL+ +SPLE++
Sbjct: 132 VKLREQEELLNKIDKVPLFAKKRKVKNTLSEELVEEFKRELDNLSPLEEK 181

[Close]

BLAST of PI0012962 vs. ExPASy TrEMBL
Match: A0A5A7TGV4 (Protein MNN4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold32G00910 PE=4 SV=1)

HSP 1 Score: 85.5 bits (210), Expect = 3.2e-13
Identity = 55/122 (45.08%), Postives = 80/122 (65.57%), Query Frame = 0


Query: 111 IAETEFQRVAKRTLKKKEKVAEAFTKAREATKRVRELVQIRKDERLREQEELHNKVEEIA 170
           + +TEF+RV  +  +K EKV     K +   +R   L + +K+ +LR+ EEL NKV+++A
Sbjct: 1   MVQTEFERVVNKAQEKTEKVRARLLKIKVKAQRAMALAEGKKEIKLRQPEELLNKVDKLA 60

Query: 171 SLADKGKATRTFSDEMAEEFDKELEEMSPLEDEVI-KPAKTRIVTMKKKVLVGQMAKRRE 230
              +KGK      +E  +EF+KE++E SPLED V+ +PAK R VTMKKKVL  Q AKRR+
Sbjct: 61  LSVEKGKEKEKTFEEFYKEFEKEIDEFSPLEDNVVERPAKKRNVTMKKKVLRDQFAKRRK 120

Query: 231 ER 232
           E+
Sbjct: 121 EK 122

[Close]

BLAST of PI0012962 vs. ExPASy TrEMBL
Match: A0A0A0K7W9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G290550 PE=4 SV=1)

HSP 1 Score: 77.4 bits (189), Expect = 8.7e-11
Identity = 46/91 (50.55%), Postives = 67/91 (73.63%), Query Frame = 0


Query: 141 TKRVRELVQIRKDERLREQEELHNKVEEIASLADKGKATRTFSDEMAEEFDKELEEMSPL 200
           T+R + L+Q +K  +LREQ+EL NK+++      KGK  +T S+E+ EEF+++LE++SPL
Sbjct: 2   TQRFKALMQDKKKVKLREQKELLNKIDQAPISTKKGKVRKTPSEEICEEFERKLEDLSPL 61

Query: 201 EDEVIKPAKTRIVTMKKKVLVGQMAKRREER 232
           EDEV+KP K + VT+KK VL  Q  KRREE+
Sbjct: 62  EDEVVKPLKKK-VTVKKSVLKKQFDKRREEK 91

[Close]

BLAST of PI0012962 vs. ExPASy TrEMBL
Match: A0A5A7U502 (Protein MNN4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold4358G00280 PE=4 SV=1)

HSP 1 Score: 75.5 bits (184), Expect = 3.3e-10
Identity = 54/139 (38.85%), Postives = 83/139 (59.71%), Query Frame = 0


Query: 98  EELKRKQVEAS-----SPIAETEFQRVAKRTLKKKEKVAEAFTKAREATKRVRELVQIRK 157
           E L RK+ + +     SPIA+ EF+ +AK+T +K +KV     K +   +RV+ LV+ ++
Sbjct: 42  ETLLRKETQDTTLNIFSPIAKIEFESLAKKTQEKTKKVKSRLLKLKVKAQRVKALVEEKE 101

Query: 158 DERLREQEELHNKVEEIASLADKGKATRTFSDEMAEEFDKELEEMSPLEDEVIKPAKTRI 217
           + + + +EEL +KVE++   A K K      +E  EEF+KE+E + PLE E  +P K R 
Sbjct: 102 EAKTKGREELLSKVEKVVHSAKKDKGKEKTHEEHCEEFEKEIENLCPLEKEAPRPKKKRK 161

Query: 218 VTMKKKVLVGQMAKRREER 232
           VTMKKK L  Q   R+ E+
Sbjct: 162 VTMKKKTLKMQFENRQAEK 180

[Close]

BLAST of PI0012962 vs. ExPASy TrEMBL
Match: A0A5A7TQG2 (Protein MNN4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold316G001330 PE=4 SV=1)

HSP 1 Score: 75.1 bits (183), Expect = 4.3e-10
Identity = 51/117 (43.59%), Postives = 79/117 (67.52%), Query Frame = 0


Query: 111 IAETEFQRVAKRTLKKKEKVAEAFTKAREATKRVRELVQIRKDERLREQEELHNKVEEIA 170
           +A TEF++VA +   KKEKVA    K +  T+ ++ L + +K++RL++ EEL N VE+I 
Sbjct: 1   MALTEFKKVAAKAHAKKEKVAFCLLKLKVTTRGIKALAEEKKEKRLKDLEELLNIVEKIT 60

Query: 171 SLADKGKATRTFSDEMAEEFDKELEEMSPLEDEVIKPAKTRIVTMKKKVLVGQMAKR 228
              +KGKA +T + E  EEF+KE+E+ S L +EV+KP K R + +K+K+L  Q+ KR
Sbjct: 61  LSIEKGKAKKT-TKEYCEEFEKEMEDSSHLVEEVMKPPKRRKMIVKRKMLNDQVNKR 116

[Close]

BLAST of PI0012962 vs. NCBI nr
Match: TYK00332.1 (protein MNN4-like [Cucumis melo var. makuwa])

HSP 1 Score: 94.7 bits (234), Expect = 1.1e-15
Identity = 69/170 (40.59%), Postives = 112/170 (65.88%), Query Frame = 0


Query: 50  DLKDEDVADMVDLLAAKMEAKKEK---------KKEEERKA---EEDHHKLRDEENRRRE 109
           ++ +EDVAD+++L   + +A+++K         ++E+ERKA   E++  K R+EE RRR+
Sbjct: 12  NVDEEDVADVLELAKTRKKAREKKEEKERREKERREKERKAKEKEKERRKKRNEEERRRK 71

Query: 110 EEL----KRKQVEASSPIAETEFQRVAKRTLKKKEKVAEAFTKAREATKRVRELVQIRKD 169
           EEL    K+++V++S  IA TEF+RVA++  KKKEKV     K +   +  + L Q +K+
Sbjct: 72  EELKKQGKKEKVQSSPSIAPTEFERVARKAQKKKEKVVSGLLKMKVIVQGAKALTQEKKE 131

Query: 170 ERLREQEELHNKVEEIASLADKGKATRTFSDEMAEEFDKELEEMSPLEDE 204
            +LREQEEL NK++++   A K K   T S+E+ EEF +EL+ +SPLE++
Sbjct: 132 VKLREQEELLNKIDKVPLFAKKRKVKNTLSEELVEEFKRELDNLSPLEEK 181

[Close]

BLAST of PI0012962 vs. NCBI nr
Match: KAA0041276.1 (protein MNN4-like [Cucumis melo var. makuwa] >TYK16072.1 protein MNN4-like [Cucumis melo var. makuwa])

HSP 1 Score: 85.5 bits (210), Expect = 6.6e-13
Identity = 55/122 (45.08%), Postives = 80/122 (65.57%), Query Frame = 0


Query: 111 IAETEFQRVAKRTLKKKEKVAEAFTKAREATKRVRELVQIRKDERLREQEELHNKVEEIA 170
           + +TEF+RV  +  +K EKV     K +   +R   L + +K+ +LR+ EEL NKV+++A
Sbjct: 1   MVQTEFERVVNKAQEKTEKVRARLLKIKVKAQRAMALAEGKKEIKLRQPEELLNKVDKLA 60

Query: 171 SLADKGKATRTFSDEMAEEFDKELEEMSPLEDEVI-KPAKTRIVTMKKKVLVGQMAKRRE 230
              +KGK      +E  +EF+KE++E SPLED V+ +PAK R VTMKKKVL  Q AKRR+
Sbjct: 61  LSVEKGKEKEKTFEEFYKEFEKEIDEFSPLEDNVVERPAKKRNVTMKKKVLRDQFAKRRK 120

Query: 231 ER 232
           E+
Sbjct: 121 EK 122

[Close]

BLAST of PI0012962 vs. NCBI nr
Match: KGN44432.1 (hypothetical protein Csa_016511 [Cucumis sativus])

HSP 1 Score: 77.4 bits (189), Expect = 1.8e-10
Identity = 46/91 (50.55%), Postives = 67/91 (73.63%), Query Frame = 0


Query: 141 TKRVRELVQIRKDERLREQEELHNKVEEIASLADKGKATRTFSDEMAEEFDKELEEMSPL 200
           T+R + L+Q +K  +LREQ+EL NK+++      KGK  +T S+E+ EEF+++LE++SPL
Sbjct: 2   TQRFKALMQDKKKVKLREQKELLNKIDQAPISTKKGKVRKTPSEEICEEFERKLEDLSPL 61

Query: 201 EDEVIKPAKTRIVTMKKKVLVGQMAKRREER 232
           EDEV+KP K + VT+KK VL  Q  KRREE+
Sbjct: 62  EDEVVKPLKKK-VTVKKSVLKKQFDKRREEK 91

[Close]

BLAST of PI0012962 vs. NCBI nr
Match: KAA0048705.1 (protein MNN4-like [Cucumis melo var. makuwa])

HSP 1 Score: 75.5 bits (184), Expect = 6.8e-10
Identity = 54/139 (38.85%), Postives = 83/139 (59.71%), Query Frame = 0


Query: 98  EELKRKQVEAS-----SPIAETEFQRVAKRTLKKKEKVAEAFTKAREATKRVRELVQIRK 157
           E L RK+ + +     SPIA+ EF+ +AK+T +K +KV     K +   +RV+ LV+ ++
Sbjct: 42  ETLLRKETQDTTLNIFSPIAKIEFESLAKKTQEKTKKVKSRLLKLKVKAQRVKALVEEKE 101

Query: 158 DERLREQEELHNKVEEIASLADKGKATRTFSDEMAEEFDKELEEMSPLEDEVIKPAKTRI 217
           + + + +EEL +KVE++   A K K      +E  EEF+KE+E + PLE E  +P K R 
Sbjct: 102 EAKTKGREELLSKVEKVVHSAKKDKGKEKTHEEHCEEFEKEIENLCPLEKEAPRPKKKRK 161

Query: 218 VTMKKKVLVGQMAKRREER 232
           VTMKKK L  Q   R+ E+
Sbjct: 162 VTMKKKTLKMQFENRQAEK 180

[Close]

BLAST of PI0012962 vs. NCBI nr
Match: KAA0045354.1 (protein MNN4-like [Cucumis melo var. makuwa])

HSP 1 Score: 75.1 bits (183), Expect = 8.9e-10
Identity = 51/117 (43.59%), Postives = 79/117 (67.52%), Query Frame = 0


Query: 111 IAETEFQRVAKRTLKKKEKVAEAFTKAREATKRVRELVQIRKDERLREQEELHNKVEEIA 170
           +A TEF++VA +   KKEKVA    K +  T+ ++ L + +K++RL++ EEL N VE+I 
Sbjct: 1   MALTEFKKVAAKAHAKKEKVAFCLLKLKVTTRGIKALAEEKKEKRLKDLEELLNIVEKIT 60

Query: 171 SLADKGKATRTFSDEMAEEFDKELEEMSPLEDEVIKPAKTRIVTMKKKVLVGQMAKR 228
              +KGKA +T + E  EEF+KE+E+ S L +EV+KP K R + +K+K+L  Q+ KR
Sbjct: 61  LSIEKGKAKKT-TKEYCEEFEKEMEDSSHLVEEVMKPPKRRKMIVKRKMLNDQVNKR 116

The following BLAST results are available for this feature:

BLAST of PI0012962 vs.


Match Name	E-value	Identity	Description

BLAST of PI0012962 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BNL6	5.2e-16	40.59	Protein MNN4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1923G0...	[more]
A0A5A7TGV4	3.2e-13	45.08	Protein MNN4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold32G009...	[more]
A0A0A0K7W9	8.7e-11	50.55	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G290550 PE=4 SV=1	[more]
A0A5A7U502	3.3e-10	38.85	Protein MNN4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold4358G0...	[more]
A0A5A7TQG2	4.3e-10	43.59	Protein MNN4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold316G00...	[more]

BLAST of PI0012962 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK00332.1	1.1e-15	40.59	protein MNN4-like [Cucumis melo var. makuwa]	[more]
KAA0041276.1	6.6e-13	45.08	protein MNN4-like [Cucumis melo var. makuwa] >TYK16072.1 protein MNN4-like [Cucu...	[more]
KGN44432.1	1.8e-10	50.55	hypothetical protein Csa_016511 [Cucumis sativus]	[more]
KAA0048705.1	6.8e-10	38.85	protein MNN4-like [Cucumis melo var. makuwa]	[more]
KAA0045354.1	8.9e-10	43.59	protein MNN4-like [Cucumis melo var. makuwa]	[more]

BLAST of PI0012962 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 59..108
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..32
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 10..32
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 69..108

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0012962.1	PI0012962.1	mRNA