PI0012957 (gene) Melon (PI 482460) v1

Overview


Name	PI0012957
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	LOB domain-containing protein
Location	chr10: 16667512 .. 16669062 (+)
RNA-Seq Expression	PI0012957
Synteny	PI0012957

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAAAAGAAAAAAAATATTCTCTCTCCTCCCCCCTCTCATTTTTCTCTCTCTAGAAAACTTTAATTAAATATATATATTTTTTAATTTATGGCTTACGTGGCCAAATGTACTAATAATTCTCCTCCAACTCCCATCAGTGTTAATAATCCAAATAATCCTTTATCTTTCTCACCAATGTCTTCTTCCCCACCCACTTCTCAACCCTCGTCTCCTCCGCCCCCTGCGGTGGTTCTCAGCCCCTGCGCCGCCTGTAAGATCCTCCGTCGCCGCTGCGTCGAGAAATGCGTTTTGGCTCCTTATTTCCCTCCCACTGACCCTCTTAAGTTCACCATTGCCCATAGAGTTTTTGGAGCTAGCAATATCATCAAGTTTTTGCAAGTATGCCCTCCATTTCTTTTCCATTTTTCTTTTTTATAAAAGATCTGTAGTTCCAATCTCCAACTTTTCCTAAAATGTCCTTCATTTCTTTTGAAATAGTCTAATTTATCTTCTCATATATACTTTCTATAATATTCTATATTCTTTTAGATGAGGGATTTTAAAAAAAGAAAAAGAAATCTATTTTTGTTTAGAGTTTAAGGTTAGAAAATTACTATTAGTAATAATGGTAATGAACTTCTTTGGTATTTCTAAATGTAAGAAAAATAAATAAGAGGGGTATGGTTGGATTTAACTTAAAAAGAAAATGAATTGATTTGATTTGACTTAACTAGGTTTTTTGACTTTTGATGGGACTTAATTAATGAATCAATTCCCGTAATTGATGGAATTTTGGTTTAATTAGACTTTCATTTAGGTTAAATTAAAGTTTAGGGTATTTGTTTGGTAAATGAATGAAGTTGAATTTTGATAGAGACTGAGAAAAGTTTACAAATTTTGTAGGAGCTTCCAGAGTGTCAAAGAACTGATGCAGTGAGCAGTATGGTATATGAAGCAAATGCTCGACTGCGAGATCCAGTTTACGGTAGTGCAGGCGCAATTTGCCAACTGCAAAAGCAAGTGAGCGAACTACAAGCTCAACTAGCCAAGGCTAGGGCAGAGGTGGCTAATATGCAGCAACAACAAGCCAACTTACTAGCCTTAATTTGCATGGAAATGAGGCAATCACCGGAACCTGTTTGGCAGCCGCAACTCGTGGACACTACATGCTTCCTCGATGACGCCACCCTCAGCTCACCTTGGGAGCCACTCTGGACGTGATCTGCCCATTCTTTTGCAATCATATTTAATTTGGATTAGACAAAGATTTAAGTTAGTTAAATTGTTATAGAAAAATATATACTCTAAATAATATATAATTAGTAATGTTGATGATGATAATAATGTTATTGATTTTAACTTAAAAATATGAAAAGGGATCCAAGTTTTTTCCCTTTAAAATTCTAATATTCTTAGTTTCAATGGAGAGAGAGAGAAGTGGAAAAGGAGAGAAATCAAAGAGGTTAATTTGGACTTTTTAGAGGGTGGTGGTTGTAATTTCATTTACAAGATTTAATTGCTACTTTCTTTCTTTCTTCCTTCTTTTTTTAATGAAAACTCCTTTTGGGTAA

mRNA sequence

AAAAAAGAAAAAAAATATTCTCTCTCCTCCCCCCTCTCATTTTTCTCTCTCTAGAAAACTTTAATTAAATATATATATTTTTTAATTTATGGCTTACGTGGCCAAATGTACTAATAATTCTCCTCCAACTCCCATCAGTGTTAATAATCCAAATAATCCTTTATCTTTCTCACCAATGTCTTCTTCCCCACCCACTTCTCAACCCTCGTCTCCTCCGCCCCCTGCGGTGGTTCTCAGCCCCTGCGCCGCCTGTAAGATCCTCCGTCGCCGCTGCGTCGAGAAATGCGTTTTGGCTCCTTATTTCCCTCCCACTGACCCTCTTAAGTTCACCATTGCCCATAGAGTTTTTGGAGCTAGCAATATCATCAAGTTTTTGCAAGAGCTTCCAGAGTGTCAAAGAACTGATGCAGTGAGCAGTATGGTATATGAAGCAAATGCTCGACTGCGAGATCCAGTTTACGGTAGTGCAGGCGCAATTTGCCAACTGCAAAAGCAAGTGAGCGAACTACAAGCTCAACTAGCCAAGGCTAGGGCAGAGGTGGCTAATATGCAGCAACAACAAGCCAACTTACTAGCCTTAATTTGCATGGAAATGAGGCAATCACCGGAACCTGTTTGGCAGCCGCAACTCGTGGACACTACATGCTTCCTCGATGACGCCACCCTCAGCTCACCTTGGGAGCCACTCTGGACGTGATCTGCCCATTCTTTTGCAATCATATTTAATTTGGATTAGACAAAGATTTAAGTTAGTTAAATTGTTATAGAAAAATATATACTCTAAATAATATATAATTAGTAATGTTGATGATGATAATAATGTTATTGATTTTAACTTAAAAATATGAAAAGGGATCCAAGTTTTTTCCCTTTAAAATTCTAATATTCTTAGTTTCAATGGAGAGAGAGAGAAGTGGAAAAGGAGAGAAATCAAAGAGGTTAATTTGGACTTTTTAGAGGGTGGTGGTTGTAATTTCATTTACAAGATTTAATTGCTACTTTCTTTCTTTCTTCCTTCTTTTTTTAATGAAAACTCCTTTTGGGTAA

Coding sequence (CDS)

ATGGCTTACGTGGCCAAATGTACTAATAATTCTCCTCCAACTCCCATCAGTGTTAATAATCCAAATAATCCTTTATCTTTCTCACCAATGTCTTCTTCCCCACCCACTTCTCAACCCTCGTCTCCTCCGCCCCCTGCGGTGGTTCTCAGCCCCTGCGCCGCCTGTAAGATCCTCCGTCGCCGCTGCGTCGAGAAATGCGTTTTGGCTCCTTATTTCCCTCCCACTGACCCTCTTAAGTTCACCATTGCCCATAGAGTTTTTGGAGCTAGCAATATCATCAAGTTTTTGCAAGAGCTTCCAGAGTGTCAAAGAACTGATGCAGTGAGCAGTATGGTATATGAAGCAAATGCTCGACTGCGAGATCCAGTTTACGGTAGTGCAGGCGCAATTTGCCAACTGCAAAAGCAAGTGAGCGAACTACAAGCTCAACTAGCCAAGGCTAGGGCAGAGGTGGCTAATATGCAGCAACAACAAGCCAACTTACTAGCCTTAATTTGCATGGAAATGAGGCAATCACCGGAACCTGTTTGGCAGCCGCAACTCGTGGACACTACATGCTTCCTCGATGACGCCACCCTCAGCTCACCTTGGGAGCCACTCTGGACGTGA

Protein sequence

MAYVAKCTNNSPPTPISVNNPNNPLSFSPMSSSPPTSQPSSPPPPAVVLSPCAACKILRRRCVEKCVLAPYFPPTDPLKFTIAHRVFGASNIIKFLQELPECQRTDAVSSMVYEANARLRDPVYGSAGAICQLQKQVSELQAQLAKARAEVANMQQQQANLLALICMEMRQSPEPVWQPQLVDTTCFLDDATLSSPWEPLWT

Homology

[Close]

BLAST of PI0012957 vs. ExPASy Swiss-Prot
Match: Q9LQR0 (LOB domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=LBD1 PE=2 SV=1)

HSP 1 Score: 211.8 bits (538), Expect = 7.0e-54
Identity = 120/185 (64.86%), Postives = 141/185 (76.22%), Query Frame = 0


Query: 26  SFSPMSSSPPTSQPSSPPP---PAVVLSPCAACKILRRRCVEKCVLAPYFPPTDPLKFTI 85
           S + ++++P  S  SSPPP   P VVLSPCAACKILRRRC E+CVLAPYFPPTDP KFTI
Sbjct: 5   SDASVATTPIISSSSSPPPSLSPRVVLSPCAACKILRRRCAERCVLAPYFPPTDPAKFTI 64

Query: 86  AHRVFGASNIIKFLQELPECQRTDAVSSMVYEANARLRDPVYGSAGAICQLQKQVSELQA 145
           AHRVFGASNIIKFLQELPE QRTDAV+SMVYEA AR+RDPVYG AGAI  LQ+QVSELQA
Sbjct: 65  AHRVFGASNIIKFLQELPESQRTDAVNSMVYEAEARIRDPVYGCAGAIYHLQRQVSELQA 124

Query: 146 QLAKARAEVANMQQQQANLLALIC-MEMRQSPEPVWQPQLVDTTCFLDDATLSSP----W 203
           QLAKA+ E+ NMQ Q++NLL LI  M+ +Q  E        +   FL+D + ++     W
Sbjct: 125 QLAKAQVEMVNMQFQRSNLLELIYNMDQQQKQEQDNMSFESNDLGFLEDKSNTNSSMLWW 184

[Close]

BLAST of PI0012957 vs. ExPASy Swiss-Prot
Match: Q9SK08 (LOB domain-containing protein 11 OS=Arabidopsis thaliana OX=3702 GN=LBD11 PE=2 SV=2)

HSP 1 Score: 209.5 bits (532), Expect = 3.5e-53
Identity = 128/226 (56.64%), Postives = 145/226 (64.16%), Query Frame = 0


Query: 4   VAKCTNNSPPTPISVNNPNNPLSFSPMSSSPPTSQPSSPPPPAVVLSPCAACKILRRRCV 63
           VAK T  + P    VN+P      SP SS PP   P  PP P VVLSPCAACKILRRRC 
Sbjct: 18  VAKVTETTTP----VNSP------SPTSSPPPPPSPQQPPQPPVVLSPCAACKILRRRCA 77

Query: 64  EKCVLAPYFPPTDPLKFTIAHRVFGASNIIKFLQELPECQRTDAVSSMVYEANARLRDPV 123
           +KCVLAPYFPPTDP KFTIAHRVFGASNIIKFLQELPE QRTDAV+SMVYEA AR+RDPV
Sbjct: 78  DKCVLAPYFPPTDPAKFTIAHRVFGASNIIKFLQELPESQRTDAVNSMVYEAGARMRDPV 137

Query: 124 YGSAGAICQLQKQVSELQAQLAKARAEVANMQQQQANLLALICMEMRQS----PEPVWQP 183
           YG AGAI  LQ+QVSELQAQLAK + E+  MQ Q+++LL LI   M Q+     E   Q 
Sbjct: 138 YGCAGAIYHLQRQVSELQAQLAKTQVELVGMQLQRSSLLELI-YNMEQTKLSVQEQGQQK 197

Query: 184 QLVDTTCFLDDATLSSP-----------------------WEPLWT 203
              +++    D  +SSP                       W+PLWT
Sbjct: 198 MSFESSFESGDEFISSPDEESNDLGFLEDNNNNNNSSMSWWDPLWT 232

[Close]

BLAST of PI0012957 vs. ExPASy Swiss-Prot
Match: Q8LBW3 (LOB domain-containing protein 12 OS=Arabidopsis thaliana OX=3702 GN=LBD12 PE=1 SV=2)

HSP 1 Score: 149.8 bits (377), Expect = 3.2e-35
Identity = 72/108 (66.67%), Postives = 86/108 (79.63%), Query Frame = 0


Query: 50  SPCAACKILRRRCVEKCVLAPYFPPTDPLKFTIAHRVFGASNIIKFLQELPECQRTDAVS 109
           SPCA+CK+LRRRC + C+ APYFPP DP KF I H+VFGASN+ K LQELP  QR DAV+
Sbjct: 7   SPCASCKLLRRRCAKDCIFAPYFPPDDPHKFAIVHKVFGASNVSKMLQELPVHQRADAVN 66

Query: 110 SMVYEANARLRDPVYGSAGAICQLQKQVSELQAQLAKARAEVANMQQQ 158
           S+V+EANAR+RDPVYG  GAI  LQ QVS+LQ QLA A+AE+  +Q Q
Sbjct: 67  SLVFEANARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQAEILCIQMQ 114

[Close]

BLAST of PI0012957 vs. ExPASy Swiss-Prot
Match: Q9SHE9 (LOB domain-containing protein 4 OS=Arabidopsis thaliana OX=3702 GN=LBD4 PE=1 SV=1)

HSP 1 Score: 147.1 bits (370), Expect = 2.1e-34
Identity = 73/110 (66.36%), Postives = 87/110 (79.09%), Query Frame = 0


Query: 50  SPCAACKILRRRCVEKCVLAPYFPPTDPLKFTIAHRVFGASNIIKFLQELPECQRTDAVS 109
           SPCAACK+LRRRC + CV +PYFP  +P KF   HRVFGASN+ K LQELP  QR DAVS
Sbjct: 12  SPCAACKLLRRRCAQDCVFSPYFPADEPQKFANVHRVFGASNVNKMLQELPIHQRGDAVS 71

Query: 110 SMVYEANARLRDPVYGSAGAICQLQKQVSELQAQLAKARAEVANMQQQQA 160
           SMVYEANAR+RDPVYG  GAI  LQ+Q+  LQAQLA A+AEV +++ +Q+
Sbjct: 72  SMVYEANARVRDPVYGCVGAISSLQQQIDVLQAQLALAQAEVVHLRVRQS 121

[Close]

BLAST of PI0012957 vs. ExPASy Swiss-Prot
Match: Q8L5T5 (LOB domain-containing protein 15 OS=Arabidopsis thaliana OX=3702 GN=LBD15 PE=1 SV=2)

HSP 1 Score: 139.8 bits (351), Expect = 3.4e-32
Identity = 67/120 (55.83%), Postives = 86/120 (71.67%), Query Frame = 0


Query: 40  SSPPPPAVVLSPCAACKILRRRCVEKCVLAPYFPPTDPLKFTIAHRVFGASNIIKFLQEL 99
           S PP     ++PCAACK+LRRRC ++C  +PYF P +P KF   H+VFGASN+ K L E+
Sbjct: 34  SGPPGTLNTITPCAACKLLRRRCAQECPFSPYFSPHEPHKFASVHKVFGASNVSKMLMEV 93

Query: 100 PECQRTDAVSSMVYEANARLRDPVYGSAGAICQLQKQVSELQAQLAKARAEVANMQQQQA 159
           PE QR DA +S+VYEAN RLRDPVYG  GAI  LQ+QV  LQA+L   R+E+   +Q++A
Sbjct: 94  PESQRADAANSLVYEANVRLRDPVYGCMGAISALQQQVQALQAELTAVRSEILKYKQREA 153

[Close]

BLAST of PI0012957 vs. ExPASy TrEMBL
Match: A0A1S3BDP1 (LOB domain-containing protein 1-like OS=Cucumis melo OX=3656 GN=LOC103488750 PE=3 SV=1)

HSP 1 Score: 394.0 bits (1011), Expect = 3.7e-106
Identity = 200/203 (98.52%), Postives = 200/203 (98.52%), Query Frame = 0


Query: 1   MAYVAKCTNNSPPTPISV-NNPNNPLSFSPMSSSPPTSQPSSPPPPAVVLSPCAACKILR 60
           MAYVAKCTNNSPPTPIS  NNPNNPLSFSPMSSSPPTSQPSSPPPP VVLSPCAACKILR
Sbjct: 1   MAYVAKCTNNSPPTPISFNNNPNNPLSFSPMSSSPPTSQPSSPPPPPVVLSPCAACKILR 60

Query: 61  RRCVEKCVLAPYFPPTDPLKFTIAHRVFGASNIIKFLQELPECQRTDAVSSMVYEANARL 120
           RRCVEKCVLAPYFPPTDPLKFTIAHRVFGASNIIKFLQELPECQRTDAVSSMVYEANARL
Sbjct: 61  RRCVEKCVLAPYFPPTDPLKFTIAHRVFGASNIIKFLQELPECQRTDAVSSMVYEANARL 120

Query: 121 RDPVYGSAGAICQLQKQVSELQAQLAKARAEVANMQQQQANLLALICMEMRQSPEPVWQP 180
           RDPVYGSAGAICQLQKQVSELQAQLAKARAEVANMQQQQANLLALICMEMRQSPEPVWQP
Sbjct: 121 RDPVYGSAGAICQLQKQVSELQAQLAKARAEVANMQQQQANLLALICMEMRQSPEPVWQP 180

Query: 181 QLVDTTCFLDDATLSSPWEPLWT 203
           QLVDTTCFLDDATLSSPWEPLWT
Sbjct: 181 QLVDTTCFLDDATLSSPWEPLWT 203

[Close]

BLAST of PI0012957 vs. ExPASy TrEMBL
Match: A0A6J1GZI6 (LOB domain-containing protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC111458656 PE=3 SV=1)

HSP 1 Score: 353.6 bits (906), Expect = 5.5e-94
Identity = 183/211 (86.73%), Postives = 193/211 (91.47%), Query Frame = 0


Query: 1   MAYVAKCTNNSPPTPISVNNPNNPLSFSPMSS---------SPPTSQPSSPPPPAVVLSP 60
           M Y+AKCT N+P TPI+V  PN+PLS+SP+SS         SPPTSQPSSPPPP V+LSP
Sbjct: 1   MXYLAKCT-NAPSTPITV--PNHPLSYSPISSSSAATTNFGSPPTSQPSSPPPPTVILSP 60

Query: 61  CAACKILRRRCVEKCVLAPYFPPTDPLKFTIAHRVFGASNIIKFLQELPECQRTDAVSSM 120
           CAACKILRRRCVEKCVLAPYFPP++PLKFTIAHRVFGASNIIKFLQELPECQRTDAVSSM
Sbjct: 61  CAACKILRRRCVEKCVLAPYFPPSEPLKFTIAHRVFGASNIIKFLQELPECQRTDAVSSM 120

Query: 121 VYEANARLRDPVYGSAGAICQLQKQVSELQAQLAKARAEVANMQQQQANLLALICMEMRQ 180
           VYEANARLRDPVYGSAGAICQLQKQVSELQAQLAKARAEVANMQ QQANLLALICMEMRQ
Sbjct: 121 VYEANARLRDPVYGSAGAICQLQKQVSELQAQLAKARAEVANMQHQQANLLALICMEMRQ 180

Query: 181 SPEPVWQPQLVDTTCFLDDATLSSPWEPLWT 203
           SP+PVW PQLVDTTCFLDDA LSSPWEPLWT
Sbjct: 181 SPDPVWPPQLVDTTCFLDDAALSSPWEPLWT 208

[Close]

BLAST of PI0012957 vs. ExPASy TrEMBL
Match: A0A6J1KJX7 (LOB domain-containing protein 1-like OS=Cucurbita maxima OX=3661 GN=LOC111493855 PE=3 SV=1)

HSP 1 Score: 350.9 bits (899), Expect = 3.5e-93
Identity = 182/211 (86.26%), Postives = 194/211 (91.94%), Query Frame = 0


Query: 1   MAYVAKCTNNSPPTPISVNNPNNPLSFSPMSS---------SPPTSQPSSPPPPAVVLSP 60
           MAY+AKCT N+P TPI+V+  N+PLS+SP+SS         SPPTSQPSSPPPPAV+LSP
Sbjct: 1   MAYLAKCT-NAPSTPITVS--NHPLSYSPISSSSAATTNFGSPPTSQPSSPPPPAVILSP 60

Query: 61  CAACKILRRRCVEKCVLAPYFPPTDPLKFTIAHRVFGASNIIKFLQELPECQRTDAVSSM 120
           CAACKILRRRCVEKCVLAPYFPP++PLKFTIAHRVFGASNIIKFLQELPECQRTDAVSSM
Sbjct: 61  CAACKILRRRCVEKCVLAPYFPPSEPLKFTIAHRVFGASNIIKFLQELPECQRTDAVSSM 120

Query: 121 VYEANARLRDPVYGSAGAICQLQKQVSELQAQLAKARAEVANMQQQQANLLALICMEMRQ 180
           VYEA+ARLRDPVYGSAGAICQLQKQVSELQAQLAKARAEVANMQ QQANLLALICMEMRQ
Sbjct: 121 VYEAHARLRDPVYGSAGAICQLQKQVSELQAQLAKARAEVANMQHQQANLLALICMEMRQ 180

Query: 181 SPEPVWQPQLVDTTCFLDDATLSSPWEPLWT 203
           SP+PVW PQL DTTCFLDDA LSSPWEPLWT
Sbjct: 181 SPDPVWPPQLPDTTCFLDDAALSSPWEPLWT 208

[Close]

BLAST of PI0012957 vs. ExPASy TrEMBL
Match: A0A0A0KNK9 (LOB domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G175870 PE=3 SV=1)

HSP 1 Score: 345.5 bits (885), Expect = 1.5e-91
Identity = 173/173 (100.00%), Postives = 173/173 (100.00%), Query Frame = 0


Query: 30  MSSSPPTSQPSSPPPPAVVLSPCAACKILRRRCVEKCVLAPYFPPTDPLKFTIAHRVFGA 89
           MSSSPPTSQPSSPPPPAVVLSPCAACKILRRRCVEKCVLAPYFPPTDPLKFTIAHRVFGA
Sbjct: 1   MSSSPPTSQPSSPPPPAVVLSPCAACKILRRRCVEKCVLAPYFPPTDPLKFTIAHRVFGA 60

Query: 90  SNIIKFLQELPECQRTDAVSSMVYEANARLRDPVYGSAGAICQLQKQVSELQAQLAKARA 149
           SNIIKFLQELPECQRTDAVSSMVYEANARLRDPVYGSAGAICQLQKQVSELQAQLAKARA
Sbjct: 61  SNIIKFLQELPECQRTDAVSSMVYEANARLRDPVYGSAGAICQLQKQVSELQAQLAKARA 120

Query: 150 EVANMQQQQANLLALICMEMRQSPEPVWQPQLVDTTCFLDDATLSSPWEPLWT 203
           EVANMQQQQANLLALICMEMRQSPEPVWQPQLVDTTCFLDDATLSSPWEPLWT
Sbjct: 121 EVANMQQQQANLLALICMEMRQSPEPVWQPQLVDTTCFLDDATLSSPWEPLWT 173

[Close]

BLAST of PI0012957 vs. ExPASy TrEMBL
Match: A0A5A7SSI2 (LOB domain-containing protein 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold65G00380 PE=3 SV=1)

HSP 1 Score: 343.6 bits (880), Expect = 5.7e-91
Identity = 172/173 (99.42%), Postives = 172/173 (99.42%), Query Frame = 0


Query: 30  MSSSPPTSQPSSPPPPAVVLSPCAACKILRRRCVEKCVLAPYFPPTDPLKFTIAHRVFGA 89
           MSSSPPTSQPSSPPPP VVLSPCAACKILRRRCVEKCVLAPYFPPTDPLKFTIAHRVFGA
Sbjct: 1   MSSSPPTSQPSSPPPPPVVLSPCAACKILRRRCVEKCVLAPYFPPTDPLKFTIAHRVFGA 60

Query: 90  SNIIKFLQELPECQRTDAVSSMVYEANARLRDPVYGSAGAICQLQKQVSELQAQLAKARA 149
           SNIIKFLQELPECQRTDAVSSMVYEANARLRDPVYGSAGAICQLQKQVSELQAQLAKARA
Sbjct: 61  SNIIKFLQELPECQRTDAVSSMVYEANARLRDPVYGSAGAICQLQKQVSELQAQLAKARA 120

Query: 150 EVANMQQQQANLLALICMEMRQSPEPVWQPQLVDTTCFLDDATLSSPWEPLWT 203
           EVANMQQQQANLLALICMEMRQSPEPVWQPQLVDTTCFLDDATLSSPWEPLWT
Sbjct: 121 EVANMQQQQANLLALICMEMRQSPEPVWQPQLVDTTCFLDDATLSSPWEPLWT 173

[Close]

BLAST of PI0012957 vs. NCBI nr
Match: XP_004143693.1 (LOB domain-containing protein 1 [Cucumis sativus] >KAE8647965.1 hypothetical protein Csa_000465 [Cucumis sativus])

HSP 1 Score: 397.9 bits (1021), Expect = 5.2e-107
Identity = 202/203 (99.51%), Postives = 202/203 (99.51%), Query Frame = 0


Query: 1   MAYVAKCTNNSPPTPISV-NNPNNPLSFSPMSSSPPTSQPSSPPPPAVVLSPCAACKILR 60
           MAYVAKCTNNSPPTPISV NNPNNPLSFSPMSSSPPTSQPSSPPPPAVVLSPCAACKILR
Sbjct: 1   MAYVAKCTNNSPPTPISVNNNPNNPLSFSPMSSSPPTSQPSSPPPPAVVLSPCAACKILR 60

Query: 61  RRCVEKCVLAPYFPPTDPLKFTIAHRVFGASNIIKFLQELPECQRTDAVSSMVYEANARL 120
           RRCVEKCVLAPYFPPTDPLKFTIAHRVFGASNIIKFLQELPECQRTDAVSSMVYEANARL
Sbjct: 61  RRCVEKCVLAPYFPPTDPLKFTIAHRVFGASNIIKFLQELPECQRTDAVSSMVYEANARL 120

Query: 121 RDPVYGSAGAICQLQKQVSELQAQLAKARAEVANMQQQQANLLALICMEMRQSPEPVWQP 180
           RDPVYGSAGAICQLQKQVSELQAQLAKARAEVANMQQQQANLLALICMEMRQSPEPVWQP
Sbjct: 121 RDPVYGSAGAICQLQKQVSELQAQLAKARAEVANMQQQQANLLALICMEMRQSPEPVWQP 180

Query: 181 QLVDTTCFLDDATLSSPWEPLWT 203
           QLVDTTCFLDDATLSSPWEPLWT
Sbjct: 181 QLVDTTCFLDDATLSSPWEPLWT 203

[Close]

BLAST of PI0012957 vs. NCBI nr
Match: XP_008445860.1 (PREDICTED: LOB domain-containing protein 1-like [Cucumis melo])

HSP 1 Score: 394.0 bits (1011), Expect = 7.5e-106
Identity = 200/203 (98.52%), Postives = 200/203 (98.52%), Query Frame = 0


Query: 1   MAYVAKCTNNSPPTPISV-NNPNNPLSFSPMSSSPPTSQPSSPPPPAVVLSPCAACKILR 60
           MAYVAKCTNNSPPTPIS  NNPNNPLSFSPMSSSPPTSQPSSPPPP VVLSPCAACKILR
Sbjct: 1   MAYVAKCTNNSPPTPISFNNNPNNPLSFSPMSSSPPTSQPSSPPPPPVVLSPCAACKILR 60

Query: 61  RRCVEKCVLAPYFPPTDPLKFTIAHRVFGASNIIKFLQELPECQRTDAVSSMVYEANARL 120
           RRCVEKCVLAPYFPPTDPLKFTIAHRVFGASNIIKFLQELPECQRTDAVSSMVYEANARL
Sbjct: 61  RRCVEKCVLAPYFPPTDPLKFTIAHRVFGASNIIKFLQELPECQRTDAVSSMVYEANARL 120

Query: 121 RDPVYGSAGAICQLQKQVSELQAQLAKARAEVANMQQQQANLLALICMEMRQSPEPVWQP 180
           RDPVYGSAGAICQLQKQVSELQAQLAKARAEVANMQQQQANLLALICMEMRQSPEPVWQP
Sbjct: 121 RDPVYGSAGAICQLQKQVSELQAQLAKARAEVANMQQQQANLLALICMEMRQSPEPVWQP 180

Query: 181 QLVDTTCFLDDATLSSPWEPLWT 203
           QLVDTTCFLDDATLSSPWEPLWT
Sbjct: 181 QLVDTTCFLDDATLSSPWEPLWT 203

[Close]

BLAST of PI0012957 vs. NCBI nr
Match: XP_023532963.1 (LOB domain-containing protein 1-like [Cucurbita pepo subsp. pepo] >KAG6601046.1 LOB domain-containing protein 1, partial [Cucurbita argyrosperma subsp. sororia] >KAG7031857.1 LOB domain-containing protein 1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 355.5 bits (911), Expect = 3.0e-94
Identity = 184/211 (87.20%), Postives = 194/211 (91.94%), Query Frame = 0


Query: 1   MAYVAKCTNNSPPTPISVNNPNNPLSFSPMSS---------SPPTSQPSSPPPPAVVLSP 60
           MAY+AKCT N+P TPI+V  PN+PLS+SP+SS         SPPTSQPSSPPPP V+LSP
Sbjct: 1   MAYLAKCT-NAPSTPITV--PNHPLSYSPISSSSAATTNFGSPPTSQPSSPPPPTVILSP 60

Query: 61  CAACKILRRRCVEKCVLAPYFPPTDPLKFTIAHRVFGASNIIKFLQELPECQRTDAVSSM 120
           CAACKILRRRCVEKCVLAPYFPP++PLKFTIAHRVFGASNIIKFLQELPECQRTDAVSSM
Sbjct: 61  CAACKILRRRCVEKCVLAPYFPPSEPLKFTIAHRVFGASNIIKFLQELPECQRTDAVSSM 120

Query: 121 VYEANARLRDPVYGSAGAICQLQKQVSELQAQLAKARAEVANMQQQQANLLALICMEMRQ 180
           VYEANARLRDPVYGSAGAICQLQKQVSELQAQLAKARAEVANMQ QQANLLALICMEMRQ
Sbjct: 121 VYEANARLRDPVYGSAGAICQLQKQVSELQAQLAKARAEVANMQHQQANLLALICMEMRQ 180

Query: 181 SPEPVWQPQLVDTTCFLDDATLSSPWEPLWT 203
           SP+PVW PQLVDTTCFLDDA LSSPWEPLWT
Sbjct: 181 SPDPVWPPQLVDTTCFLDDAALSSPWEPLWT 208

[Close]

BLAST of PI0012957 vs. NCBI nr
Match: XP_038892948.1 (LOB domain-containing protein 1-like [Benincasa hispida])

HSP 1 Score: 354.0 bits (907), Expect = 8.7e-94
Identity = 191/213 (89.67%), Postives = 194/213 (91.08%), Query Frame = 0


Query: 1   MAYVAKCTNNSPPTPISVNNPNNPLSFSPMSS-----------SPPTSQPSSPPPPAVVL 60
           MAYVAKCT NSPPTPI+V  PN+ LSFSPMSS           SPPTSQPSSPP  AVVL
Sbjct: 1   MAYVAKCT-NSPPTPINV--PNH-LSFSPMSSSSAAATTTNFASPPTSQPSSPPLSAVVL 60

Query: 61  SPCAACKILRRRCVEKCVLAPYFPPTDPLKFTIAHRVFGASNIIKFLQELPECQRTDAVS 120
           SPCAACKILRRRCVEKCVLAPYFPPT+PLKFTIAHRVFGASNIIKFLQELPE QRTDAVS
Sbjct: 61  SPCAACKILRRRCVEKCVLAPYFPPTEPLKFTIAHRVFGASNIIKFLQELPESQRTDAVS 120

Query: 121 SMVYEANARLRDPVYGSAGAICQLQKQVSELQAQLAKARAEVANMQQQQANLLALICMEM 180
           SMVYEANARLRDPVYGSAGAICQLQKQVSELQAQLAKARAEVANMQQQQANLLALICMEM
Sbjct: 121 SMVYEANARLRDPVYGSAGAICQLQKQVSELQAQLAKARAEVANMQQQQANLLALICMEM 180

Query: 181 RQSPEPVWQPQLVDTTCFLDDATLSSPWEPLWT 203
           RQSPEPVW PQLVDTTCFLDDATLSSPWEPLWT
Sbjct: 181 RQSPEPVWPPQLVDTTCFLDDATLSSPWEPLWT 209

[Close]

BLAST of PI0012957 vs. NCBI nr
Match: XP_022957188.1 (LOB domain-containing protein 1-like [Cucurbita moschata])

HSP 1 Score: 353.6 bits (906), Expect = 1.1e-93
Identity = 183/211 (86.73%), Postives = 193/211 (91.47%), Query Frame = 0


Query: 1   MAYVAKCTNNSPPTPISVNNPNNPLSFSPMSS---------SPPTSQPSSPPPPAVVLSP 60
           M Y+AKCT N+P TPI+V  PN+PLS+SP+SS         SPPTSQPSSPPPP V+LSP
Sbjct: 1   MXYLAKCT-NAPSTPITV--PNHPLSYSPISSSSAATTNFGSPPTSQPSSPPPPTVILSP 60

Query: 61  CAACKILRRRCVEKCVLAPYFPPTDPLKFTIAHRVFGASNIIKFLQELPECQRTDAVSSM 120
           CAACKILRRRCVEKCVLAPYFPP++PLKFTIAHRVFGASNIIKFLQELPECQRTDAVSSM
Sbjct: 61  CAACKILRRRCVEKCVLAPYFPPSEPLKFTIAHRVFGASNIIKFLQELPECQRTDAVSSM 120

Query: 121 VYEANARLRDPVYGSAGAICQLQKQVSELQAQLAKARAEVANMQQQQANLLALICMEMRQ 180
           VYEANARLRDPVYGSAGAICQLQKQVSELQAQLAKARAEVANMQ QQANLLALICMEMRQ
Sbjct: 121 VYEANARLRDPVYGSAGAICQLQKQVSELQAQLAKARAEVANMQHQQANLLALICMEMRQ 180

Query: 181 SPEPVWQPQLVDTTCFLDDATLSSPWEPLWT 203
           SP+PVW PQLVDTTCFLDDA LSSPWEPLWT
Sbjct: 181 SPDPVWPPQLVDTTCFLDDAALSSPWEPLWT 208

[Close]

BLAST of PI0012957 vs. TAIR 10
Match: AT1G07900.1 (LOB domain-containing protein 1 )

HSP 1 Score: 211.8 bits (538), Expect = 4.9e-55
Identity = 120/185 (64.86%), Postives = 141/185 (76.22%), Query Frame = 0


Query: 26  SFSPMSSSPPTSQPSSPPP---PAVVLSPCAACKILRRRCVEKCVLAPYFPPTDPLKFTI 85
           S + ++++P  S  SSPPP   P VVLSPCAACKILRRRC E+CVLAPYFPPTDP KFTI
Sbjct: 5   SDASVATTPIISSSSSPPPSLSPRVVLSPCAACKILRRRCAERCVLAPYFPPTDPAKFTI 64

Query: 86  AHRVFGASNIIKFLQELPECQRTDAVSSMVYEANARLRDPVYGSAGAICQLQKQVSELQA 145
           AHRVFGASNIIKFLQELPE QRTDAV+SMVYEA AR+RDPVYG AGAI  LQ+QVSELQA
Sbjct: 65  AHRVFGASNIIKFLQELPESQRTDAVNSMVYEAEARIRDPVYGCAGAIYHLQRQVSELQA 124

Query: 146 QLAKARAEVANMQQQQANLLALIC-MEMRQSPEPVWQPQLVDTTCFLDDATLSSP----W 203
           QLAKA+ E+ NMQ Q++NLL LI  M+ +Q  E        +   FL+D + ++     W
Sbjct: 125 QLAKAQVEMVNMQFQRSNLLELIYNMDQQQKQEQDNMSFESNDLGFLEDKSNTNSSMLWW 184

[Close]

BLAST of PI0012957 vs. TAIR 10
Match: AT2G28500.1 (LOB domain-containing protein 11 )

HSP 1 Score: 209.5 bits (532), Expect = 2.5e-54
Identity = 128/226 (56.64%), Postives = 145/226 (64.16%), Query Frame = 0


Query: 4   VAKCTNNSPPTPISVNNPNNPLSFSPMSSSPPTSQPSSPPPPAVVLSPCAACKILRRRCV 63
           VAK T  + P    VN+P      SP SS PP   P  PP P VVLSPCAACKILRRRC 
Sbjct: 18  VAKVTETTTP----VNSP------SPTSSPPPPPSPQQPPQPPVVLSPCAACKILRRRCA 77

Query: 64  EKCVLAPYFPPTDPLKFTIAHRVFGASNIIKFLQELPECQRTDAVSSMVYEANARLRDPV 123
           +KCVLAPYFPPTDP KFTIAHRVFGASNIIKFLQELPE QRTDAV+SMVYEA AR+RDPV
Sbjct: 78  DKCVLAPYFPPTDPAKFTIAHRVFGASNIIKFLQELPESQRTDAVNSMVYEAGARMRDPV 137

Query: 124 YGSAGAICQLQKQVSELQAQLAKARAEVANMQQQQANLLALICMEMRQS----PEPVWQP 183
           YG AGAI  LQ+QVSELQAQLAK + E+  MQ Q+++LL LI   M Q+     E   Q 
Sbjct: 138 YGCAGAIYHLQRQVSELQAQLAKTQVELVGMQLQRSSLLELI-YNMEQTKLSVQEQGQQK 197

Query: 184 QLVDTTCFLDDATLSSP-----------------------WEPLWT 203
              +++    D  +SSP                       W+PLWT
Sbjct: 198 MSFESSFESGDEFISSPDEESNDLGFLEDNNNNNNSSMSWWDPLWT 232

[Close]

BLAST of PI0012957 vs. TAIR 10
Match: AT2G30130.1 (Lateral organ boundaries (LOB) domain family protein )

HSP 1 Score: 149.8 bits (377), Expect = 2.3e-36
Identity = 72/108 (66.67%), Postives = 86/108 (79.63%), Query Frame = 0


Query: 50  SPCAACKILRRRCVEKCVLAPYFPPTDPLKFTIAHRVFGASNIIKFLQELPECQRTDAVS 109
           SPCA+CK+LRRRC + C+ APYFPP DP KF I H+VFGASN+ K LQELP  QR DAV+
Sbjct: 7   SPCASCKLLRRRCAKDCIFAPYFPPDDPHKFAIVHKVFGASNVSKMLQELPVHQRADAVN 66

Query: 110 SMVYEANARLRDPVYGSAGAICQLQKQVSELQAQLAKARAEVANMQQQ 158
           S+V+EANAR+RDPVYG  GAI  LQ QVS+LQ QLA A+AE+  +Q Q
Sbjct: 67  SLVFEANARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQAEILCIQMQ 114

[Close]

BLAST of PI0012957 vs. TAIR 10
Match: AT1G31320.1 (LOB domain-containing protein 4 )

HSP 1 Score: 147.1 bits (370), Expect = 1.5e-35
Identity = 73/110 (66.36%), Postives = 87/110 (79.09%), Query Frame = 0


Query: 50  SPCAACKILRRRCVEKCVLAPYFPPTDPLKFTIAHRVFGASNIIKFLQELPECQRTDAVS 109
           SPCAACK+LRRRC + CV +PYFP  +P KF   HRVFGASN+ K LQELP  QR DAVS
Sbjct: 12  SPCAACKLLRRRCAQDCVFSPYFPADEPQKFANVHRVFGASNVNKMLQELPIHQRGDAVS 71

Query: 110 SMVYEANARLRDPVYGSAGAICQLQKQVSELQAQLAKARAEVANMQQQQA 160
           SMVYEANAR+RDPVYG  GAI  LQ+Q+  LQAQLA A+AEV +++ +Q+
Sbjct: 72  SMVYEANARVRDPVYGCVGAISSLQQQIDVLQAQLALAQAEVVHLRVRQS 121

[Close]

BLAST of PI0012957 vs. TAIR 10
Match: AT2G40470.1 (LOB domain-containing protein 15 )

HSP 1 Score: 139.8 bits (351), Expect = 2.4e-33
Identity = 67/120 (55.83%), Postives = 86/120 (71.67%), Query Frame = 0


Query: 40  SSPPPPAVVLSPCAACKILRRRCVEKCVLAPYFPPTDPLKFTIAHRVFGASNIIKFLQEL 99
           S PP     ++PCAACK+LRRRC ++C  +PYF P +P KF   H+VFGASN+ K L E+
Sbjct: 34  SGPPGTLNTITPCAACKLLRRRCAQECPFSPYFSPHEPHKFASVHKVFGASNVSKMLMEV 93

Query: 100 PECQRTDAVSSMVYEANARLRDPVYGSAGAICQLQKQVSELQAQLAKARAEVANMQQQQA 159
           PE QR DA +S+VYEAN RLRDPVYG  GAI  LQ+QV  LQA+L   R+E+   +Q++A
Sbjct: 94  PESQRADAANSLVYEANVRLRDPVYGCMGAISALQQQVQALQAELTAVRSEILKYKQREA 153

The following BLAST results are available for this feature:

BLAST of PI0012957 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LQR0	7.0e-54	64.86	LOB domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=LBD1 PE=2 SV=...	[more]
Q9SK08	3.5e-53	56.64	LOB domain-containing protein 11 OS=Arabidopsis thaliana OX=3702 GN=LBD11 PE=2 S...	[more]
Q8LBW3	3.2e-35	66.67	LOB domain-containing protein 12 OS=Arabidopsis thaliana OX=3702 GN=LBD12 PE=1 S...	[more]
Q9SHE9	2.1e-34	66.36	LOB domain-containing protein 4 OS=Arabidopsis thaliana OX=3702 GN=LBD4 PE=1 SV=...	[more]
Q8L5T5	3.4e-32	55.83	LOB domain-containing protein 15 OS=Arabidopsis thaliana OX=3702 GN=LBD15 PE=1 S...	[more]

BLAST of PI0012957 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BDP1	3.7e-106	98.52	LOB domain-containing protein 1-like OS=Cucumis melo OX=3656 GN=LOC103488750 PE=...	[more]
A0A6J1GZI6	5.5e-94	86.73	LOB domain-containing protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC1114586...	[more]
A0A6J1KJX7	3.5e-93	86.26	LOB domain-containing protein 1-like OS=Cucurbita maxima OX=3661 GN=LOC111493855...	[more]
A0A0A0KNK9	1.5e-91	100.00	LOB domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G175870 PE=3 SV...	[more]
A0A5A7SSI2	5.7e-91	99.42	LOB domain-containing protein 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E...	[more]

BLAST of PI0012957 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004143693.1	5.2e-107	99.51	LOB domain-containing protein 1 [Cucumis sativus] >KAE8647965.1 hypothetical pro...	[more]
XP_008445860.1	7.5e-106	98.52	PREDICTED: LOB domain-containing protein 1-like [Cucumis melo]	[more]
XP_023532963.1	3.0e-94	87.20	LOB domain-containing protein 1-like [Cucurbita pepo subsp. pepo] >KAG6601046.1 ...	[more]
XP_038892948.1	8.7e-94	89.67	LOB domain-containing protein 1-like [Benincasa hispida]	[more]
XP_022957188.1	1.1e-93	86.73	LOB domain-containing protein 1-like [Cucurbita moschata]	[more]

BLAST of PI0012957 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G07900.1	4.9e-55	64.86	LOB domain-containing protein 1	[more]
AT2G28500.1	2.5e-54	56.64	LOB domain-containing protein 11	[more]
AT2G30130.1	2.3e-36	66.67	Lateral organ boundaries (LOB) domain family protein	[more]
AT1G31320.1	1.5e-35	66.36	LOB domain-containing protein 4	[more]
AT2G40470.1	2.4e-33	55.83	LOB domain-containing protein 15	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 130..164
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 7..34
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..43
None	No IPR available	PANTHER	PTHR31301:SF160	LOB DOMAIN-CONTAINING PROTEIN 1-LIKE	coord: 33..184
None	No IPR available	PANTHER	PTHR31301	LOB DOMAIN-CONTAINING PROTEIN 4-RELATED	coord: 33..184
IPR004883	Lateral organ boundaries, LOB	PFAM	PF03195	LOB	coord: 51..148 e-value: 7.1E-40 score: 135.6
IPR004883	Lateral organ boundaries, LOB	PROSITE	PS50891	LOB	coord: 50..151 score: 25.538782

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0012957.1	PI0012957.1	mRNA