PI0012955 (gene) Melon (PI 482460) v1

Overview
NamePI0012955
Typegene
OrganismCucumis metuliferus (Melon (PI 482460) v1)
DescriptionUnknown protein
Locationchr09: 12928895 .. 12930121 (-)
RNA-Seq ExpressionPI0012955
SyntenyPI0012955
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATCACCTTCCATGCCCACAAAGAAACGGAAAGGCGGTCAAAGACATTGGGTGACACAGCAAATGTAGGCGCGACCCAGGCAGATCACAAGCGAAAAGCCCCAGCCGTCGCATCAACCCCTCAACCAAAAGTAAAAAAACCAAAGGTTGATGCGGCGAAACAACCCCAACCACTCAAAATCATCCACCCCTCTTCCCGCCCAATCAAAAGAACTCCCTCCAAAATCCAAAGAGATTCCAGCCTCTCTCAACCGCCTAGCCACTCTTCGCCTACTCCATCCAGTCAACCTTCACCCATCATATCCCCCCGTCATTCACCTCTCCCCCACATTTTATCACCCATCAATGCACCCAACCTCTCACCCCGCCCACATACCTCTTCGCCCACAAAAACAACATCTCCCATCCTTCCTCCATATAAACCTTCCCCAAGGCGAGCTGACACATTATCGCCTCTTATTCTTTCGCCCATCATGGACCTTTCCAACCTCTGCAATGACCCACCCACAGCCGCCACTGAGGTCGTTGAGGTGCCCCCACCCACCATCCATCTGGTAGACCCTCTAGTGCGAACCTCTCCAATTCTCATTCTTTCCGAAGAGGACGCCAACCAGGAAACTAGGATCTCGCCACCACCACTGCCTGTTTTGGATACCCGCGACCATGTTGATGACCCACACACTAAGGACCCAATGCCTATCCTTAATGATGCTGGTGAGACAGTTTCCTCGGCACGCACCACCAACGTTCAACCTAATAACGCGCCGATGGAAGACGAAGATTTAGGCGATTTGTTAGGATCGCTTGTGTGTAAGCCAGTGTTTGATTATTTTGATCAAGTTCTGGCTCACCAAGTTGATCAGGCGGTGCAACTCCAAGCCTTGAAGACCTCAGTTGATCAATTGCAACGCCCTGCCCCCGAAAACCTTGTGACGCTCGCCTCTCAAGAAGAAGTTAGTGCTCTGAGGTGCGAGCTAAAGGACCTTTCGACAAACAACGCCGAACTCTCAACCGCTGTATCCAACCATACCTCTCTGGCCATTGCGCAATCAGAGATGATGCGGCAAATAGCTGCACGGCTTGATCGACAGTTTTGCACGCAAATGGAGTACACTTACACGGCCATTGTTCAACGCGTGCTAGCACCAATCATACCGCCAGATCTAGAAGCATTTTTTTCACCACTCACGCGTCTTGGCGATCTTGCTCCCCGCCAAGACAATTAA

mRNA sequence

ATGATCACCTTCCATGCCCACAAAGAAACGGAAAGGCGGTCAAAGACATTGGGTGACACAGCAAATGTAGGCGCGACCCAGGCAGATCACAAGCGAAAAGCCCCAGCCGTCGCATCAACCCCTCAACCAAAAGTAAAAAAACCAAAGGTTGATGCGGCGAAACAACCCCAACCACTCAAAATCATCCACCCCTCTTCCCGCCCAATCAAAAGAACTCCCTCCAAAATCCAAAGAGATTCCAGCCTCTCTCAACCGCCTAGCCACTCTTCGCCTACTCCATCCAGTCAACCTTCACCCATCATATCCCCCCGTCATTCACCTCTCCCCCACATTTTATCACCCATCAATGCACCCAACCTCTCACCCCGCCCACATACCTCTTCGCCCACAAAAACAACATCTCCCATCCTTCCTCCATATAAACCTTCCCCAAGGCGAGCTGACACATTATCGCCTCTTATTCTTTCGCCCATCATGGACCTTTCCAACCTCTGCAATGACCCACCCACAGCCGCCACTGAGGTCGTTGAGGTGCCCCCACCCACCATCCATCTGGTAGACCCTCTAGTGCGAACCTCTCCAATTCTCATTCTTTCCGAAGAGGACGCCAACCAGGAAACTAGGATCTCGCCACCACCACTGCCTGTTTTGGATACCCGCGACCATGTTGATGACCCACACACTAAGGACCCAATGCCTATCCTTAATGATGCTGGTGAGACAGTTTCCTCGGCACGCACCACCAACGTTCAACCTAATAACGCGCCGATGGAAGACGAAGATTTAGGCGATTTGTTAGGATCGCTTGTGTGTAAGCCAGTGTTTGATTATTTTGATCAAGTTCTGGCTCACCAAGTTGATCAGGCGGTGCAACTCCAAGCCTTGAAGACCTCAGTTGATCAATTGCAACGCCCTGCCCCCGAAAACCTTGTGACGCTCGCCTCTCAAGAAGAAGTTAGTGCTCTGAGGTGCGAGCTAAAGGACCTTTCGACAAACAACGCCGAACTCTCAACCGCTGTATCCAACCATACCTCTCTGGCCATTGCGCAATCAGAGATGATGCGGCAAATAGCTGCACGGCTTGATCGACAGTTTTGCACGCAAATGGAGTACACTTACACGGCCATTGTTCAACGCGTGCTAGCACCAATCATACCGCCAGATCTAGAAGCATTTTTTTCACCACTCACGCGTCTTGGCGATCTTGCTCCCCGCCAAGACAATTAA

Coding sequence (CDS)

ATGATCACCTTCCATGCCCACAAAGAAACGGAAAGGCGGTCAAAGACATTGGGTGACACAGCAAATGTAGGCGCGACCCAGGCAGATCACAAGCGAAAAGCCCCAGCCGTCGCATCAACCCCTCAACCAAAAGTAAAAAAACCAAAGGTTGATGCGGCGAAACAACCCCAACCACTCAAAATCATCCACCCCTCTTCCCGCCCAATCAAAAGAACTCCCTCCAAAATCCAAAGAGATTCCAGCCTCTCTCAACCGCCTAGCCACTCTTCGCCTACTCCATCCAGTCAACCTTCACCCATCATATCCCCCCGTCATTCACCTCTCCCCCACATTTTATCACCCATCAATGCACCCAACCTCTCACCCCGCCCACATACCTCTTCGCCCACAAAAACAACATCTCCCATCCTTCCTCCATATAAACCTTCCCCAAGGCGAGCTGACACATTATCGCCTCTTATTCTTTCGCCCATCATGGACCTTTCCAACCTCTGCAATGACCCACCCACAGCCGCCACTGAGGTCGTTGAGGTGCCCCCACCCACCATCCATCTGGTAGACCCTCTAGTGCGAACCTCTCCAATTCTCATTCTTTCCGAAGAGGACGCCAACCAGGAAACTAGGATCTCGCCACCACCACTGCCTGTTTTGGATACCCGCGACCATGTTGATGACCCACACACTAAGGACCCAATGCCTATCCTTAATGATGCTGGTGAGACAGTTTCCTCGGCACGCACCACCAACGTTCAACCTAATAACGCGCCGATGGAAGACGAAGATTTAGGCGATTTGTTAGGATCGCTTGTGTGTAAGCCAGTGTTTGATTATTTTGATCAAGTTCTGGCTCACCAAGTTGATCAGGCGGTGCAACTCCAAGCCTTGAAGACCTCAGTTGATCAATTGCAACGCCCTGCCCCCGAAAACCTTGTGACGCTCGCCTCTCAAGAAGAAGTTAGTGCTCTGAGGTGCGAGCTAAAGGACCTTTCGACAAACAACGCCGAACTCTCAACCGCTGTATCCAACCATACCTCTCTGGCCATTGCGCAATCAGAGATGATGCGGCAAATAGCTGCACGGCTTGATCGACAGTTTTGCACGCAAATGGAGTACACTTACACGGCCATTGTTCAACGCGTGCTAGCACCAATCATACCGCCAGATCTAGAAGCATTTTTTTCACCACTCACGCGTCTTGGCGATCTTGCTCCCCGCCAAGACAATTAA

Protein sequence

MITFHAHKETERRSKTLGDTANVGATQADHKRKAPAVASTPQPKVKKPKVDAAKQPQPLKIIHPSSRPIKRTPSKIQRDSSLSQPPSHSSPTPSSQPSPIISPRHSPLPHILSPINAPNLSPRPHTSSPTKTTSPILPPYKPSPRRADTLSPLILSPIMDLSNLCNDPPTAATEVVEVPPPTIHLVDPLVRTSPILILSEEDANQETRISPPPLPVLDTRDHVDDPHTKDPMPILNDAGETVSSARTTNVQPNNAPMEDEDLGDLLGSLVCKPVFDYFDQVLAHQVDQAVQLQALKTSVDQLQRPAPENLVTLASQEEVSALRCELKDLSTNNAELSTAVSNHTSLAIAQSEMMRQIAARLDRQFCTQMEYTYTAIVQRVLAPIIPPDLEAFFSPLTRLGDLAPRQDN
Homology
BLAST of PI0012955 vs. ExPASy TrEMBL
Match: A0A5D3DYE2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2030G00280 PE=4 SV=1)

HSP 1 Score: 78.2 bits (191), Expect = 9.0e-11
Identity = 53/174 (30.46%), Postives = 93/174 (53.45%), Query Frame = 0

Query: 238 AGETVSS-ARTTNVQPNNAPMEDEDLGDLLGSLVCKPVFDYFDQVLAHQVDQAVQLQALK 297
           A ET SS ++  +++ +    E +D+ D +GS V K  FDYF+QVL  Q   +++  A+ 
Sbjct: 164 ASETSSSPSKERDLKESFRESEGKDIYDFIGSTVAKRTFDYFEQVLYEQTINSMKHDAMT 223

Query: 298 TSVDQLQRPAPENLVTLASQEEVSALRCELKDLSTNNAELSTAVSNHTSLAIAQSEMMRQ 357
           T ++++Q    +    L  Q++      ++  +  N  +LS+ VSN T + I   EM  +
Sbjct: 224 TLMEKVQVENSKLKQLLTEQQK------QVAKIMANQDQLSSTVSNLTCVVIMNFEMTWK 283

Query: 358 IAARLDRQFCTQMEYTYTAIVQRVLAPIIPPDLEAFFSPL--TRLGDLAPRQDN 409
           +  + D+QF   +EYT+    QR+ +P I P++E+ +  +    LG   P QDN
Sbjct: 284 MGVQRDKQFKASIEYTHAVFAQRMPSPFISPEIESLYPLIQPVNLGYPDPHQDN 331

BLAST of PI0012955 vs. ExPASy TrEMBL
Match: A0A5A7VF20 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold548G00430 PE=4 SV=1)

HSP 1 Score: 78.2 bits (191), Expect = 9.0e-11
Identity = 53/174 (30.46%), Postives = 93/174 (53.45%), Query Frame = 0

Query: 238 AGETVSS-ARTTNVQPNNAPMEDEDLGDLLGSLVCKPVFDYFDQVLAHQVDQAVQLQALK 297
           A ET SS ++  +++ +    E +D+ D +GS V K  FDYF+QVL  Q   +++  A+ 
Sbjct: 244 ASETSSSPSKERDLKESFRESEGKDIYDFIGSTVAKRTFDYFEQVLYEQTINSMKHDAMT 303

Query: 298 TSVDQLQRPAPENLVTLASQEEVSALRCELKDLSTNNAELSTAVSNHTSLAIAQSEMMRQ 357
           T ++++Q    +    L  Q++      ++  +  N  +LS+ VSN T + I   EM  +
Sbjct: 304 TLMEKVQVENSKLKQLLTEQQK------QVAKIMANQDQLSSTVSNLTCVVIMNFEMTWK 363

Query: 358 IAARLDRQFCTQMEYTYTAIVQRVLAPIIPPDLEAFFSPL--TRLGDLAPRQDN 409
           +  + D+QF   +EYT+    QR+ +P I P++E+ +  +    LG   P QDN
Sbjct: 364 MGVQRDKQFKASIEYTHAVFAQRMPSPFISPEIESLYPLIQPVNLGYPDPHQDN 411

BLAST of PI0012955 vs. NCBI nr
Match: KAA0064129.1 (uncharacterized protein E6C27_scaffold548G00430 [Cucumis melo var. makuwa])

HSP 1 Score: 78.2 bits (191), Expect = 1.9e-10
Identity = 53/174 (30.46%), Postives = 93/174 (53.45%), Query Frame = 0

Query: 238 AGETVSS-ARTTNVQPNNAPMEDEDLGDLLGSLVCKPVFDYFDQVLAHQVDQAVQLQALK 297
           A ET SS ++  +++ +    E +D+ D +GS V K  FDYF+QVL  Q   +++  A+ 
Sbjct: 244 ASETSSSPSKERDLKESFRESEGKDIYDFIGSTVAKRTFDYFEQVLYEQTINSMKHDAMT 303

Query: 298 TSVDQLQRPAPENLVTLASQEEVSALRCELKDLSTNNAELSTAVSNHTSLAIAQSEMMRQ 357
           T ++++Q    +    L  Q++      ++  +  N  +LS+ VSN T + I   EM  +
Sbjct: 304 TLMEKVQVENSKLKQLLTEQQK------QVAKIMANQDQLSSTVSNLTCVVIMNFEMTWK 363

Query: 358 IAARLDRQFCTQMEYTYTAIVQRVLAPIIPPDLEAFFSPL--TRLGDLAPRQDN 409
           +  + D+QF   +EYT+    QR+ +P I P++E+ +  +    LG   P QDN
Sbjct: 364 MGVQRDKQFKASIEYTHAVFAQRMPSPFISPEIESLYPLIQPVNLGYPDPHQDN 411

BLAST of PI0012955 vs. NCBI nr
Match: TYK28611.1 (hypothetical protein E5676_scaffold2030G00280 [Cucumis melo var. makuwa])

HSP 1 Score: 78.2 bits (191), Expect = 1.9e-10
Identity = 53/174 (30.46%), Postives = 93/174 (53.45%), Query Frame = 0

Query: 238 AGETVSS-ARTTNVQPNNAPMEDEDLGDLLGSLVCKPVFDYFDQVLAHQVDQAVQLQALK 297
           A ET SS ++  +++ +    E +D+ D +GS V K  FDYF+QVL  Q   +++  A+ 
Sbjct: 164 ASETSSSPSKERDLKESFRESEGKDIYDFIGSTVAKRTFDYFEQVLYEQTINSMKHDAMT 223

Query: 298 TSVDQLQRPAPENLVTLASQEEVSALRCELKDLSTNNAELSTAVSNHTSLAIAQSEMMRQ 357
           T ++++Q    +    L  Q++      ++  +  N  +LS+ VSN T + I   EM  +
Sbjct: 224 TLMEKVQVENSKLKQLLTEQQK------QVAKIMANQDQLSSTVSNLTCVVIMNFEMTWK 283

Query: 358 IAARLDRQFCTQMEYTYTAIVQRVLAPIIPPDLEAFFSPL--TRLGDLAPRQDN 409
           +  + D+QF   +EYT+    QR+ +P I P++E+ +  +    LG   P QDN
Sbjct: 284 MGVQRDKQFKASIEYTHAVFAQRMPSPFISPEIESLYPLIQPVNLGYPDPHQDN 331

BLAST of PI0012955 vs. NCBI nr
Match: KAA0053237.1 (hypothetical protein E6C27_scaffold102G00220 [Cucumis melo var. makuwa])

HSP 1 Score: 58.5 bits (140), Expect = 1.5e-04
Identity = 43/148 (29.05%), Postives = 74/148 (50.00%), Query Frame = 0

Query: 157 PIMDLSNLCNDPPTAATEVVEVPPPTIHLVDPLVRTSPILILSEEDANQETRISPPPLPV 216
           P +DL+     P     E++ +P            + PI++LSE D  +    +      
Sbjct: 297 PHLDLNEPLLVPKVVPQELIALP------TKGAKESIPIVVLSERDMTRNDMATVNKPQE 356

Query: 217 LDTRDHVDDPHTKDPMPILNDAGETVSS-ARTTNVQPNNAPMEDEDLGDLLGSLVCKPVF 276
            +T+ +VDDP +K      N AG T SS ++  +++ +    E ++L DL+G+ +CKP F
Sbjct: 357 QETQVNVDDPLSKAKHTNPNVAGMTSSSMSQDKDLKESFVKSEGDNLYDLIGTTICKPTF 416

Query: 277 DYFDQVLAHQVDQAVQLQALKTSVDQLQ 304
           DYF+QVL  Q   +     + T +D++Q
Sbjct: 417 DYFEQVLDQQTVYSADHDTMTTMIDKVQ 438

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5D3DYE29.0e-1130.46Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5A7VF209.0e-1130.46Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
Match NameE-valueIdentityDescription
KAA0064129.11.9e-1030.46uncharacterized protein E6C27_scaffold548G00430 [Cucumis melo var. makuwa][more]
TYK28611.11.9e-1030.46hypothetical protein E5676_scaffold2030G00280 [Cucumis melo var. makuwa][more]
KAA0053237.11.5e-0429.05hypothetical protein E6C27_scaffold102G00220 [Cucumis melo var. makuwa][more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 319..339
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..16
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 119..134
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..145
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 75..89
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 90..104

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
PI0012955.1PI0012955.1mRNA