Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTTGTTGTGGGGGTTGACAGTGAGGGTGTTTCTGTGTTGGCAGATAGTATGGGGTTTGCGCTAGGTACTCTTCCTGTTCATTACCTGGGTATTCCCTTACTCTTTGGTAGGTTGCGGTCTGCGGATTGTGCGCCTCTCATCCAGCGTATTACTAGTCGGATTTGGTCTTGGTTGGCTAGAGTTTTGTCCTTTGTTGGGAGACTTCATTGGTACGTTCAGTGTTGCGGAGTTTTCAGGTCTTTTGGGCTAGTGTGTTTGTTTTGCCGACGGGTGTGCATCATGAGGTTGATAGGATTTTGATGTCGTATCTCTAGAGGGGTAAGGAAGAAGGTAGAGGGGGTGCTAAGGTCGCTTGGGTGGAGGTATGTCGCCCATTTGATGAGGGGGTCTTAATATTCGGGAGGGGAAGTTGTGGAACATTGCAGCCATTTTGAAGATTTTTTGGTTGATGTTGACTAGTTCGAGGTCTCTTTAGGTGGCTTGGGTGGAGGCCTATATTCTGAAGGGGCGGTCTTTGTGGTCTGTAGACAATGGGGCTGGAAAGCCCTGGTGTCTTCGTGCTATCCTGCGACAGTGTGATAGCCTTAGAGAGCATGTCCGTATGATGGTTGATGATAGGAGGCATTGTTGTGTGTGGCTTGACTCTTGGTTGTAGGCTCGATCATTAAGCAGATGGGGGAGAGGGTGATGTATGATGCGACGAGTAGTATGGAGGCTAGGCTTTCAAAGTTCATTGGATCGGATGGTGAGTGGAGGTGGTCGAGGGTGTCTAGGGAGTTACTTGATTTGTGGGAGAGGATTCAAGGTGTCTGTCTGTGTCTGAGTATTGGGGACCGGTGGGTGTGGGTTCCGAGTCATTGGAGTGGGTTTATGATTTCGAGTGCGTGGGAGGTTATTCGTCCTAAGGGTCGGGTTTGTTGGCTTGGTTTGTTGTAGGGTGGGGGTAATATTTCCAAACATTCTTTTTGTGCTTCGCTGGCCATCAGAGATAGGTTGGGCACTTAGAATAGGTTGAATAGGTGGCATAGTTCGATTCCTCAGTCATGTCTTCTGTGCAAGGGAGATGTTGAGTCTCAGGATTATCTATTTTTTTCTTGTCCTTTTGGGTGTGATATTTGGACTCGTATCATTCAGGCTATGGCTTCCTCTCACAGGGTTGGGGGGGTGGGATGTTGAGTTGTCTTGGGTCTGTCTTAAGGGTATAGGGAAGGGTTTGAACAGGAAGTTATGACATGTGCTCTGGTGTGCTTCGATCTACCTTATCTGAACTGAGCGTAATTGTCATCTCCATGGTGGTCAGGCTCGTGAGCCTAATGTCCTGTTTTAG
mRNA sequence
ATGTTTGTTGTGGGGGTTGACAGTGAGGGTGTTTCTGTGTTGGCAGATAGTATGGGGTTTGCGCTAGGTACTCTTCCTGTTCATTACCTGGGTATTCCCTTACTCTTTGGTAGGTTGCGGTCTGCGGATTGTGCGCCTCTCATCCAGCGTATTACTAGTCGGATTTGGTCTTGGTTGGCTAGAGTTTTGTCCTTTGTTGGGAGACTTCATTGGTACGTTCAGTGTTGCGGAAGGGGTAAGGAAGAAGGTAGAGGGGGTGCTAAGGTCGCTTGGGTGGAGGTGGCTTGGGTGGAGGCCTATATTCTGAAGGGGCGGTCTTTGTGGTCTGTAGACAATGGGGCTGGAAAGCCCTGGTGTCTTCGTGCTATCCTGCGACAGTGTGATAGCCTTAGAGAGCATGTCCGCTCGATCATTAAGCAGATGGGGGAGAGGGTGATGTATGATGCGACGAGTAGTATGGAGGCTAGGCTTTCAAAGTTCATTGGATCGGATGGTGAGTGGAGGTGGTCGAGGGTGTCTAGGGAGTTACTTGATTTGTGGGAGAGGATTCAAGGTGTCTGTCTGTGTCTGAGTATTGGGGACCGGTGGGTGTGGGTTCCGAGTCATTGGAGTGGGTTTATGATTTCGAGTGCGTGGGAGGTTATTCGTCCTAAGGGTCGGGTTTGTTGGCTTGGCTATGGCTTCCTCTCACAGGGTTGGGGGGGTGGGATGTTGAGTTGTCTTGGGTCTGTCTTAAGGGCTCGTGAGCCTAATGTCCTGTTTTAG
Coding sequence (CDS)
ATGTTTGTTGTGGGGGTTGACAGTGAGGGTGTTTCTGTGTTGGCAGATAGTATGGGGTTTGCGCTAGGTACTCTTCCTGTTCATTACCTGGGTATTCCCTTACTCTTTGGTAGGTTGCGGTCTGCGGATTGTGCGCCTCTCATCCAGCGTATTACTAGTCGGATTTGGTCTTGGTTGGCTAGAGTTTTGTCCTTTGTTGGGAGACTTCATTGGTACGTTCAGTGTTGCGGAAGGGGTAAGGAAGAAGGTAGAGGGGGTGCTAAGGTCGCTTGGGTGGAGGTGGCTTGGGTGGAGGCCTATATTCTGAAGGGGCGGTCTTTGTGGTCTGTAGACAATGGGGCTGGAAAGCCCTGGTGTCTTCGTGCTATCCTGCGACAGTGTGATAGCCTTAGAGAGCATGTCCGCTCGATCATTAAGCAGATGGGGGAGAGGGTGATGTATGATGCGACGAGTAGTATGGAGGCTAGGCTTTCAAAGTTCATTGGATCGGATGGTGAGTGGAGGTGGTCGAGGGTGTCTAGGGAGTTACTTGATTTGTGGGAGAGGATTCAAGGTGTCTGTCTGTGTCTGAGTATTGGGGACCGGTGGGTGTGGGTTCCGAGTCATTGGAGTGGGTTTATGATTTCGAGTGCGTGGGAGGTTATTCGTCCTAAGGGTCGGGTTTGTTGGCTTGGCTATGGCTTCCTCTCACAGGGTTGGGGGGGTGGGATGTTGAGTTGTCTTGGGTCTGTCTTAAGGGCTCGTGAGCCTAATGTCCTGTTTTAG
Protein sequence
MFVVGVDSEGVSVLADSMGFALGTLPVHYLGIPLLFGRLRSADCAPLIQRITSRIWSWLARVLSFVGRLHWYVQCCGRGKEEGRGGAKVAWVEVAWVEAYILKGRSLWSVDNGAGKPWCLRAILRQCDSLREHVRSIIKQMGERVMYDATSSMEARLSKFIGSDGEWRWSRVSRELLDLWERIQGVCLCLSIGDRWVWVPSHWSGFMISSAWEVIRPKGRVCWLGYGFLSQGWGGGMLSCLGSVLRAREPNVLF
Homology
BLAST of PI0012884 vs. ExPASy TrEMBL
Match:
A0A5A7V3Z0 (Reverse transcriptase domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold154G00690 PE=4 SV=1)
HSP 1 Score: 260.8 bits (665), Expect = 6.1e-66
Identity = 156/324 (48.15%), Postives = 177/324 (54.63%), Query Frame = 0
Query: 1 MFVVGVDSEGVSVLADSMGFALGTLPVHYLGIPLLFGRLRSADCAPLIQRITSRIWSWLA 60
+FV GV++E S LA MGF G L V YLG+PLL GRLRS D APLIQRITSRI SW A
Sbjct: 487 IFVAGVNNENASHLATCMGFVRGNLSVRYLGLPLLAGRLRSNDYAPLIQRITSRIRSWTA 546
Query: 61 RVLSFVGRL------------HW--------YV---------QCCGRGKEEGRGGAKVAW 120
RVLSF GRL +W YV RGKEEGRGG KVAW
Sbjct: 547 RVLSFAGRLQLVHSVLRSFQVYWASVFVLPAYVHNEVDKILRSYLWRGKEEGRGGIKVAW 606
Query: 121 VE--------------------------------------VAWVEAYILKGRSLWSVDNG 180
V+ VAWVEAYILKGRSLW VD+
Sbjct: 607 VDVCLPFEEGGLGIRDGPSWNIASTLKILWLMLTNSGSLWVAWVEAYILKGRSLWDVDSR 666
Query: 181 AGKPWCLRAILRQCDSLREHVR--------------------SIIKQMGERVMYDATSSM 237
GK WCLRAILR+ + L+ VR +I++Q+GERVMYDA S
Sbjct: 667 VGKSWCLRAILRKREKLKHLVRMKVGNGNSFRVWLDPWLPEGAILEQVGERVMYDAASRR 726
BLAST of PI0012884 vs. ExPASy TrEMBL
Match:
A0A5A7U8G1 (Non-LTR retroelement reverse transcriptase-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold76G001220 PE=4 SV=1)
HSP 1 Score: 252.3 bits (643), Expect = 2.2e-63
Identity = 143/271 (52.77%), Postives = 169/271 (62.36%), Query Frame = 0
Query: 1 MFVVGVDSEGVSVLADSMGFALGTLPVHYLGIPLLFGRLRSADCAPLIQRITSRIWSWLA 60
+FV GV++E S LA MGF G LPV YLG+PLL GRLRS DCAP+IQRITSRI SW+A
Sbjct: 419 IFVAGVNNENASQLAACMGFVRGNLPVRYLGLPLLTGRLRSNDCAPMIQRITSRIRSWIA 478
Query: 61 RVLSFVGRL------------HW---YVQCCGRGKEEG----RGG--------AKVAWVE 120
RVLSF GRL +W +V EEG R G K+ W+
Sbjct: 479 RVLSFAGRLQLVCSVLRSLQVYWASVFVLPAYVHNEEGGLDIRDGPSWNIASTLKILWLM 538
Query: 121 --------VAWVEAYILKGRSLWSVDNGAGKPWCLRAILRQCDSLREHVRSIIKQMGERV 180
VAWVEAYILKGRSLW VD+ G+ WCLRAILR +I++Q+GERV
Sbjct: 539 LTSLGSLWVAWVEAYILKGRSLWDVDSRVGRSWCLRAILR---------GAILEQVGERV 598
Query: 181 MYDATSSMEARLSKFIGSDGEWRWSRVSRELLDLWERIQGVCLCLSIGDRWVWVPSHWSG 236
+YDA S EARLS FIGS+GEW WSRV EL++LW+R+Q V CLS+ D WVWVP G
Sbjct: 599 LYDAASRREARLSDFIGSNGEWLWSRVFLELINLWDRVQEVSPCLSVSDSWVWVPGRQGG 658
BLAST of PI0012884 vs. ExPASy TrEMBL
Match:
A0A5A7TKU4 (Non-LTR retroelement reverse transcriptase-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold477G00080 PE=4 SV=1)
HSP 1 Score: 248.4 bits (633), Expect = 3.1e-62
Identity = 145/297 (48.82%), Postives = 176/297 (59.26%), Query Frame = 0
Query: 1 MFVVGVDSEGVSVLADSMGFALGTLPVHYLGIPLLFGRLRSADCAPLIQRITSRIWSWLA 60
+FV G +E S LA +MGF LG LPV YL +PLL GRLR +DCAPLIQRITSRI SW A
Sbjct: 739 IFVAGSTNEVASRLAANMGFILGNLPVRYLSLPLLTGRLRPSDCAPLIQRITSRIRSWNA 798
Query: 61 RVLSFVGR------------LHW----YVQCCGRGKEEG---------RGG--------A 120
RVLSF GR ++W + C K + R G
Sbjct: 799 RVLSFAGRFQLVRSVFRSLQVYWASVFVLPSCVHNKVDKILRSYLWRVRDGPSWNITSTL 858
Query: 121 KVAW-------VEVAWVEAYILKGRSLWSVDNGAGKPWCLRAILRQCDSLREHV------ 180
K+ W + VAWVEAYILK +SLW+VD+G + WCLRAILR+ DSL+ HV
Sbjct: 859 KILWLLTSLSSLWVAWVEAYILKRKSLWAVDSGVCRSWCLRAILRKRDSLKYHVWIEVGD 918
Query: 181 --------------RSIIKQMGERVMYDATSSMEARLSKFIGSDGEWRWSRVSRELLDLW 237
I++Q+GERV+YDA S EARLS+FIG DGEW+W RVS EL+DLW
Sbjct: 919 GSSCRVWLDPWLQGVPILEQVGERVLYDAASRREARLSEFIGPDGEWQWPRVSIELIDLW 978
BLAST of PI0012884 vs. ExPASy TrEMBL
Match:
A0A5D3CLU1 (Non-LTR retroelement reverse transcriptase-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold106G00420 PE=4 SV=1)
HSP 1 Score: 245.7 bits (626), Expect = 2.0e-61
Identity = 139/275 (50.55%), Postives = 166/275 (60.36%), Query Frame = 0
Query: 1 MFVVGVDSEGVSVLADSMGFALGTLPVHYLGIPLLFGRLRSADCAPLIQRITSRIWSWLA 60
+FV GV++E S LA MGF G LPV YLG+PLL GRLRS DCAP+IQRITSRI SW+A
Sbjct: 419 IFVAGVNNENASQLAACMGFVRGNLPVRYLGLPLLTGRLRSNDCAPMIQRITSRIRSWIA 478
Query: 61 RVLSFVGRL------------HW---YVQCCGRGKEEGR----------------GGAKV 120
RVLSF GRL +W +V E + K+
Sbjct: 479 RVLSFAGRLQLVCSVLRSLQVYWASVFVLPAYVHNEVDKILRSYLWRDGPSWNIASTLKI 538
Query: 121 AWVE--------VAWVEAYILKGRSLWSVDNGAGKPWCLRAILRQCDSLREHVRSIIKQM 180
W+ VAWVEAYILKGRSLW VD+ G+ WCLRAILR +I++Q+
Sbjct: 539 LWLMLTSLGSLWVAWVEAYILKGRSLWDVDSRVGRSWCLRAILR---------GAILEQV 598
Query: 181 GERVMYDATSSMEARLSKFIGSDGEWRWSRVSRELLDLWERIQGVCLCLSIGDRWVWVPS 236
GERV+YDA S EARLS FIGS+GEW WSRV EL++LW+R+Q V CLS+ D WVWVP
Sbjct: 599 GERVLYDAASRREARLSDFIGSNGEWLWSRVFLELINLWDRVQEVSPCLSVSDSWVWVPG 658
BLAST of PI0012884 vs. ExPASy TrEMBL
Match:
A0A5A7V4C1 (Reverse transcriptase domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold451G00110 PE=4 SV=1)
HSP 1 Score: 224.2 bits (570), Expect = 6.3e-55
Identity = 136/273 (49.82%), Postives = 153/273 (56.04%), Query Frame = 0
Query: 1 MFVVGVDSEGVSVLADSMGFALGTLPVHYLGIPLLFGRLRSADCAPLIQRITSRIWSWLA 60
+FV GV E S LA SMGF LG LPV YLG+PLL GRLRS DCAPLIQRITS I SW A
Sbjct: 310 IFVAGVSHEAASHLAASMGFGLGNLPVRYLGLPLLTGRLRSNDCAPLIQRITSWIRSWTA 369
Query: 61 RVLSFVGRL------------HW--------YV---------QCCGRGKEEGRGGAKVAW 120
RVLSF G L +W YV RGKEEGRGG KVAW
Sbjct: 370 RVLSFFGTLQLVRSVLHSLQVYWASMFVLPAYVHNEVDKILRSYLWRGKEEGRGGFKVAW 429
Query: 121 VEVAWV----EAYILKGRSLWSVDNGAGKPWCLRAILRQCDSLREHVRSIIKQMGERVMY 180
VEV E I G S W++ G I++Q+GERV Y
Sbjct: 430 VEVCLPFEEGELAIQDGPS-WNIARG----------------------PILEQVGERVFY 489
Query: 181 DATSSMEARLSKFIGSDGEWRWSRVSRELLDLWERIQGVCLCLSIGDRWVWVPSHWSGFM 240
DA S EARLS FIG DGEW+W RVS EL+DLW+R+Q V CLS+ DRWVW+P GF
Sbjct: 490 DAASRREARLSDFIGLDGEWQWPRVSMELIDLWDRVQAVSPCLSVRDRWVWIPGRQGGFS 549
BLAST of PI0012884 vs. NCBI nr
Match:
KAA0062318.1 (uncharacterized protein E6C27_scaffold154G00690 [Cucumis melo var. makuwa])
HSP 1 Score: 260.8 bits (665), Expect = 1.3e-65
Identity = 156/324 (48.15%), Postives = 177/324 (54.63%), Query Frame = 0
Query: 1 MFVVGVDSEGVSVLADSMGFALGTLPVHYLGIPLLFGRLRSADCAPLIQRITSRIWSWLA 60
+FV GV++E S LA MGF G L V YLG+PLL GRLRS D APLIQRITSRI SW A
Sbjct: 487 IFVAGVNNENASHLATCMGFVRGNLSVRYLGLPLLAGRLRSNDYAPLIQRITSRIRSWTA 546
Query: 61 RVLSFVGRL------------HW--------YV---------QCCGRGKEEGRGGAKVAW 120
RVLSF GRL +W YV RGKEEGRGG KVAW
Sbjct: 547 RVLSFAGRLQLVHSVLRSFQVYWASVFVLPAYVHNEVDKILRSYLWRGKEEGRGGIKVAW 606
Query: 121 VE--------------------------------------VAWVEAYILKGRSLWSVDNG 180
V+ VAWVEAYILKGRSLW VD+
Sbjct: 607 VDVCLPFEEGGLGIRDGPSWNIASTLKILWLMLTNSGSLWVAWVEAYILKGRSLWDVDSR 666
Query: 181 AGKPWCLRAILRQCDSLREHVR--------------------SIIKQMGERVMYDATSSM 237
GK WCLRAILR+ + L+ VR +I++Q+GERVMYDA S
Sbjct: 667 VGKSWCLRAILRKREKLKHLVRMKVGNGNSFRVWLDPWLPEGAILEQVGERVMYDAASRR 726
BLAST of PI0012884 vs. NCBI nr
Match:
KAA0049769.1 (non-LTR retroelement reverse transcriptase-like protein [Cucumis melo var. makuwa])
HSP 1 Score: 252.3 bits (643), Expect = 4.5e-63
Identity = 143/271 (52.77%), Postives = 169/271 (62.36%), Query Frame = 0
Query: 1 MFVVGVDSEGVSVLADSMGFALGTLPVHYLGIPLLFGRLRSADCAPLIQRITSRIWSWLA 60
+FV GV++E S LA MGF G LPV YLG+PLL GRLRS DCAP+IQRITSRI SW+A
Sbjct: 419 IFVAGVNNENASQLAACMGFVRGNLPVRYLGLPLLTGRLRSNDCAPMIQRITSRIRSWIA 478
Query: 61 RVLSFVGRL------------HW---YVQCCGRGKEEG----RGG--------AKVAWVE 120
RVLSF GRL +W +V EEG R G K+ W+
Sbjct: 479 RVLSFAGRLQLVCSVLRSLQVYWASVFVLPAYVHNEEGGLDIRDGPSWNIASTLKILWLM 538
Query: 121 --------VAWVEAYILKGRSLWSVDNGAGKPWCLRAILRQCDSLREHVRSIIKQMGERV 180
VAWVEAYILKGRSLW VD+ G+ WCLRAILR +I++Q+GERV
Sbjct: 539 LTSLGSLWVAWVEAYILKGRSLWDVDSRVGRSWCLRAILR---------GAILEQVGERV 598
Query: 181 MYDATSSMEARLSKFIGSDGEWRWSRVSRELLDLWERIQGVCLCLSIGDRWVWVPSHWSG 236
+YDA S EARLS FIGS+GEW WSRV EL++LW+R+Q V CLS+ D WVWVP G
Sbjct: 599 LYDAASRREARLSDFIGSNGEWLWSRVFLELINLWDRVQEVSPCLSVSDSWVWVPGRQGG 658
BLAST of PI0012884 vs. NCBI nr
Match:
KAA0042317.1 (non-LTR retroelement reverse transcriptase-like protein [Cucumis melo var. makuwa] >TYK15441.1 non-LTR retroelement reverse transcriptase-like protein [Cucumis melo var. makuwa])
HSP 1 Score: 248.4 bits (633), Expect = 6.4e-62
Identity = 145/297 (48.82%), Postives = 176/297 (59.26%), Query Frame = 0
Query: 1 MFVVGVDSEGVSVLADSMGFALGTLPVHYLGIPLLFGRLRSADCAPLIQRITSRIWSWLA 60
+FV G +E S LA +MGF LG LPV YL +PLL GRLR +DCAPLIQRITSRI SW A
Sbjct: 739 IFVAGSTNEVASRLAANMGFILGNLPVRYLSLPLLTGRLRPSDCAPLIQRITSRIRSWNA 798
Query: 61 RVLSFVGR------------LHW----YVQCCGRGKEEG---------RGG--------A 120
RVLSF GR ++W + C K + R G
Sbjct: 799 RVLSFAGRFQLVRSVFRSLQVYWASVFVLPSCVHNKVDKILRSYLWRVRDGPSWNITSTL 858
Query: 121 KVAW-------VEVAWVEAYILKGRSLWSVDNGAGKPWCLRAILRQCDSLREHV------ 180
K+ W + VAWVEAYILK +SLW+VD+G + WCLRAILR+ DSL+ HV
Sbjct: 859 KILWLLTSLSSLWVAWVEAYILKRKSLWAVDSGVCRSWCLRAILRKRDSLKYHVWIEVGD 918
Query: 181 --------------RSIIKQMGERVMYDATSSMEARLSKFIGSDGEWRWSRVSRELLDLW 237
I++Q+GERV+YDA S EARLS+FIG DGEW+W RVS EL+DLW
Sbjct: 919 GSSCRVWLDPWLQGVPILEQVGERVLYDAASRREARLSEFIGPDGEWQWPRVSIELIDLW 978
BLAST of PI0012884 vs. NCBI nr
Match:
TYK12108.1 (non-LTR retroelement reverse transcriptase-like protein [Cucumis melo var. makuwa])
HSP 1 Score: 245.7 bits (626), Expect = 4.2e-61
Identity = 139/275 (50.55%), Postives = 166/275 (60.36%), Query Frame = 0
Query: 1 MFVVGVDSEGVSVLADSMGFALGTLPVHYLGIPLLFGRLRSADCAPLIQRITSRIWSWLA 60
+FV GV++E S LA MGF G LPV YLG+PLL GRLRS DCAP+IQRITSRI SW+A
Sbjct: 419 IFVAGVNNENASQLAACMGFVRGNLPVRYLGLPLLTGRLRSNDCAPMIQRITSRIRSWIA 478
Query: 61 RVLSFVGRL------------HW---YVQCCGRGKEEGR----------------GGAKV 120
RVLSF GRL +W +V E + K+
Sbjct: 479 RVLSFAGRLQLVCSVLRSLQVYWASVFVLPAYVHNEVDKILRSYLWRDGPSWNIASTLKI 538
Query: 121 AWVE--------VAWVEAYILKGRSLWSVDNGAGKPWCLRAILRQCDSLREHVRSIIKQM 180
W+ VAWVEAYILKGRSLW VD+ G+ WCLRAILR +I++Q+
Sbjct: 539 LWLMLTSLGSLWVAWVEAYILKGRSLWDVDSRVGRSWCLRAILR---------GAILEQV 598
Query: 181 GERVMYDATSSMEARLSKFIGSDGEWRWSRVSRELLDLWERIQGVCLCLSIGDRWVWVPS 236
GERV+YDA S EARLS FIGS+GEW WSRV EL++LW+R+Q V CLS+ D WVWVP
Sbjct: 599 GERVLYDAASRREARLSDFIGSNGEWLWSRVFLELINLWDRVQEVSPCLSVSDSWVWVPG 658
BLAST of PI0012884 vs. NCBI nr
Match:
KAA0060725.1 (uncharacterized protein E6C27_scaffold72G00120 [Cucumis melo var. makuwa] >TYK01467.1 uncharacterized protein E5676_scaffold451G00110 [Cucumis melo var. makuwa])
HSP 1 Score: 224.2 bits (570), Expect = 1.3e-54
Identity = 136/273 (49.82%), Postives = 153/273 (56.04%), Query Frame = 0
Query: 1 MFVVGVDSEGVSVLADSMGFALGTLPVHYLGIPLLFGRLRSADCAPLIQRITSRIWSWLA 60
+FV GV E S LA SMGF LG LPV YLG+PLL GRLRS DCAPLIQRITS I SW A
Sbjct: 310 IFVAGVSHEAASHLAASMGFGLGNLPVRYLGLPLLTGRLRSNDCAPLIQRITSWIRSWTA 369
Query: 61 RVLSFVGRL------------HW--------YV---------QCCGRGKEEGRGGAKVAW 120
RVLSF G L +W YV RGKEEGRGG KVAW
Sbjct: 370 RVLSFFGTLQLVRSVLHSLQVYWASMFVLPAYVHNEVDKILRSYLWRGKEEGRGGFKVAW 429
Query: 121 VEVAWV----EAYILKGRSLWSVDNGAGKPWCLRAILRQCDSLREHVRSIIKQMGERVMY 180
VEV E I G S W++ G I++Q+GERV Y
Sbjct: 430 VEVCLPFEEGELAIQDGPS-WNIARG----------------------PILEQVGERVFY 489
Query: 181 DATSSMEARLSKFIGSDGEWRWSRVSRELLDLWERIQGVCLCLSIGDRWVWVPSHWSGFM 240
DA S EARLS FIG DGEW+W RVS EL+DLW+R+Q V CLS+ DRWVW+P GF
Sbjct: 490 DAASRREARLSDFIGLDGEWQWPRVSMELIDLWDRVQAVSPCLSVRDRWVWIPGRQGGFS 549
BLAST of PI0012884 vs. TAIR 10
Match:
AT3G24255.1 (RNA-directed DNA polymerase (reverse transcriptase)-related family protein )
HSP 1 Score: 61.2 bits (147), Expect = 1.4e-09
Identity = 30/67 (44.78%), Postives = 41/67 (61.19%), Query Frame = 0
Query: 3 VVGVDSEGVSVLADSMGFALGTLPVHYLGIPLLFGRLRSADCAPLIQRITSRIWSWLARV 62
+ GV + + S FA G LPV YLG+PLL ++ ++D PL+++I RI W AR
Sbjct: 1 MAGVKDNDKADILHSFPFASGALPVRYLGLPLLTKKMTTSDYGPLVEKIRVRIGKWTARH 60
Query: 63 LSFVGRL 70
LSF GRL
Sbjct: 61 LSFAGRL 67
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A5A7V3Z0 | 6.1e-66 | 48.15 | Reverse transcriptase domain-containing protein OS=Cucumis melo var. makuwa OX=1... | [more] |
| A0A5A7U8G1 | 2.2e-63 | 52.77 | Non-LTR retroelement reverse transcriptase-like protein OS=Cucumis melo var. mak... | [more] |
| A0A5A7TKU4 | 3.1e-62 | 48.82 | Non-LTR retroelement reverse transcriptase-like protein OS=Cucumis melo var. mak... | [more] |
| A0A5D3CLU1 | 2.0e-61 | 50.55 | Non-LTR retroelement reverse transcriptase-like protein OS=Cucumis melo var. mak... | [more] |
| A0A5A7V4C1 | 6.3e-55 | 49.82 | Reverse transcriptase domain-containing protein OS=Cucumis melo var. makuwa OX=1... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| KAA0062318.1 | 1.3e-65 | 48.15 | uncharacterized protein E6C27_scaffold154G00690 [Cucumis melo var. makuwa] | [more] |
| KAA0049769.1 | 4.5e-63 | 52.77 | non-LTR retroelement reverse transcriptase-like protein [Cucumis melo var. makuw... | [more] |
| KAA0042317.1 | 6.4e-62 | 48.82 | non-LTR retroelement reverse transcriptase-like protein [Cucumis melo var. makuw... | [more] |
| TYK12108.1 | 4.2e-61 | 50.55 | non-LTR retroelement reverse transcriptase-like protein [Cucumis melo var. makuw... | [more] |
| KAA0060725.1 | 1.3e-54 | 49.82 | uncharacterized protein E6C27_scaffold72G00120 [Cucumis melo var. makuwa] >TYK01... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| AT3G24255.1 | 1.4e-09 | 44.78 | RNA-directed DNA polymerase (reverse transcriptase)-related family protein | [more] |
