PI0012861 (gene) Melon (PI 482460) v1

Overview


Name	PI0012861
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	RAB6-interacting golgin
Location	chr08: 17433140 .. 17435040 (-)
RNA-Seq Expression	PI0012861
Synteny	PI0012861

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TGAGGAAGAAAGAAAAATTGAGTCAAATTGAAGTTTTAAATTTATATAATTGTGTAAAAGGTAATATTTATATAAATATAAAGGTTGAGATTATAAGCTATGGGTCCAATTTTTACAAGTTTGAGGTTTAGTTAGAAATGGAGAAGTTAATTTTTTGCTATTAAAAATAAAAAGAGATGGTTTTCCCCAATTTGGGGTATAAAATATATAAAAAGTAAACAAATTAAAATGAGAGGGTTTGAAAATAAAAATAAATAAATAAATAATGGGGGAAAATGATATTTTAACCCAATAGAAAAAGAAAGCAACAGAGCAATAGCCTAAGAAAGAAAAAGCAGAGGAGAGGAAAGGAAAGGAAATAGCGATTCATTCATTCACAGAAACAGAAACAAAAGGGGGCGTTGGTTTCAAGAAAAATCAAGATCAAGGACGAGAGAAAAGATGCAGAGCGACCAGAATCAACCGCAGCAACTTCAAGCAATGTTAGAGAATTCTGGAAATTTGAGTTTCAGTAGTAAAGAAGACGATGAGATGTCCAAATCGGCGCTTGCGGCTTTTAGGGAAAAGGAAGAGGAGATCGACCGGATGAGGACTGAGCTTCACAGCAAACTTCAAGTTCGTCTCGGCCGTGTTCAGGAAGAATCCAGGCGTTTGTCTTCACTTCGAGAGGTTCTAAACCCTAGTTCCTAAATCCTCTTCTTTCTATTCCATCTCTGTAACCAACTTCTGTTGGAATTTTGTTTCTGTGAGGAACTGTTACAAGTTTTTACATGATTAATTGATGAACCAACAGGAACTTGAAGCCATAGGAGGAGATCCAATGAGGAAGGAAATTGGACAAATTCGTAAGAAAATTGATACCCTAAACAAGGAATTGAAGCCTCTTGGAGTAACGTGCCAAAAGAAGGTTTGTTTTTTTTTTTTTTTTCTTTCTAAAATTACTTTTTTAAACAGTTCTAAAATTATTTTTAATGATTCCGTTGGGTTGGATTTTTATATATAATTTAAGCATGTTCAGAAGATTTGTAAAGATTGTTTTTTTTTTCTTTTGGGAATTTGTAAAGATTTAAGAATGTTATTCTAAGGATTGAAGAAATCTAGATTCAACCATGATAATTGATCATAGAACCTCACTCATCTCCAAAAGGATGTTTCTTTTTTTTTTTTACAAATTCAAGATTAGGTTGGTGATAATTGGACCCATTATCATTTTAATAAGAAATATAGCAAAACCTTTTAAAAAAATTTACAGTGTCTTTAAGGTTTTTTTTTTTTCAAATAGTTTCAATTTTTTCTATCTTTTAAATATCCATGGTTAGAACAAAAAAACATAAAAAAGATAAAAATTATCCATATGTATTTCTATCAAATTTAGAAAAAAAAAAAATAGAGAATTACTTTGAAAATAAATCCATAAAAACTATTGTTTGGGGGGATGGGGTGGGGGGAAATTTGTATAAATATTTTTAGTAGTTGGATAAAATTAGGCATTAGATTTTTAGAATAAGTATGTTATGGGCTGAAAAAAATGGTTGAAATTGTTGTGTAACAGGAGAAAGAGTACAAAGATGCCCTTGATGCTTTTAATGAAAAGAACAACGAAAAAGTACAGTTAATATCAAAACTGATGGAGGTTAGTTTCGTAAATTTAATATCAAAACCCTTTCTTTTTTGTTCAATTTGATTTTCCTTAAATTTAAGATTTTTGTGTTTCTTTTTTTCTTTCTAATTTTAGATGGTTGGTGAAAGTGAAAAGCTGAGGCTAAAGAGGTTGGAAGAATTGAGTAAGCATGTGGATAACACTTCTTAATTTAATTACTGAATTCAATCAATCAATCAATCAGTTTCTATTAGTTTCCTTTGGTTTTATGTTTTATGTTTTTTTTTTTTTTTTTTTTTTT

mRNA sequence

TGAGGAAGAAAGAAAAATTGAGTCAAATTGAAGTTTTAAATTTATATAATTGTGTAAAAGGTAATATTTATATAAATATAAAGGTTGAGATTATAAGCTATGGGTCCAATTTTTACAAGTTTGAGGTTTAGTTAGAAATGGAGAAGTTAATTTTTTGCTATTAAAAATAAAAAGAGATGGTTTTCCCCAATTTGGGGTATAAAATATATAAAAAGTAAACAAATTAAAATGAGAGGGTTTGAAAATAAAAATAAATAAATAAATAATGGGGGAAAATGATATTTTAACCCAATAGAAAAAGAAAGCAACAGAGCAATAGCCTAAGAAAGAAAAAGCAGAGGAGAGGAAAGGAAAGGAAATAGCGATTCATTCATTCACAGAAACAGAAACAAAAGGGGGCGTTGGTTTCAAGAAAAATCAAGATCAAGGACGAGAGAAAAGATGCAGAGCGACCAGAATCAACCGCAGCAACTTCAAGCAATGTTAGAGAATTCTGGAAATTTGAGTTTCAGTAGTAAAGAAGACGATGAGATGTCCAAATCGGCGCTTGCGGCTTTTAGGGAAAAGGAAGAGGAGATCGACCGGATGAGGACTGAGCTTCACAGCAAACTTCAAGTTCGTCTCGGCCGTGTTCAGGAAGAATCCAGGCGTTTGTCTTCACTTCGAGAGGAACTTGAAGCCATAGGAGGAGATCCAATGAGGAAGGAAATTGGACAAATTCGTAAGAAAATTGATACCCTAAACAAGGAATTGAAGCCTCTTGGAGTAACGTGCCAAAAGAAGGAGAAAGAGTACAAAGATGCCCTTGATGCTTTTAATGAAAAGAACAACGAAAAAGTACAGTTAATATCAAAACTGATGGAGATGGTTGGTGAAAGTGAAAAGCTGAGGCTAAAGAGGTTGGAAGAATTGAGTAAGCATGTGGATAACACTTCTTAATTTAATTACTGAATTCAATCAATCAATCAATCAGTTTCTATTAGTTTCCTTTGGTTTTATGTTTTATGTTTTTTTTTTTTTTTTTTTTTTT

Coding sequence (CDS)

ATGCAGAGCGACCAGAATCAACCGCAGCAACTTCAAGCAATGTTAGAGAATTCTGGAAATTTGAGTTTCAGTAGTAAAGAAGACGATGAGATGTCCAAATCGGCGCTTGCGGCTTTTAGGGAAAAGGAAGAGGAGATCGACCGGATGAGGACTGAGCTTCACAGCAAACTTCAAGTTCGTCTCGGCCGTGTTCAGGAAGAATCCAGGCGTTTGTCTTCACTTCGAGAGGAACTTGAAGCCATAGGAGGAGATCCAATGAGGAAGGAAATTGGACAAATTCGTAAGAAAATTGATACCCTAAACAAGGAATTGAAGCCTCTTGGAGTAACGTGCCAAAAGAAGGAGAAAGAGTACAAAGATGCCCTTGATGCTTTTAATGAAAAGAACAACGAAAAAGTACAGTTAATATCAAAACTGATGGAGATGGTTGGTGAAAGTGAAAAGCTGAGGCTAAAGAGGTTGGAAGAATTGAGTAAGCATGTGGATAACACTTCTTAA

Protein sequence

MQSDQNQPQQLQAMLENSGNLSFSSKEDDEMSKSALAAFREKEEEIDRMRTELHSKLQVRLGRVQEESRRLSSLREELEAIGGDPMRKEIGQIRKKIDTLNKELKPLGVTCQKKEKEYKDALDAFNEKNNEKVQLISKLMEMVGESEKLRLKRLEELSKHVDNTS

Homology

[Close]

BLAST of PI0012861 vs. ExPASy TrEMBL
Match: A0A1S3CIS0 (RAB6-interacting golgin OS=Cucumis melo OX=3656 GN=LOC103500877 PE=3 SV=1)

HSP 1 Score: 293.1 bits (749), Expect = 7.2e-76
Identity = 159/165 (96.36%), Postives = 162/165 (98.18%), Query Frame = 0


Query: 1   MQSDQNQPQQLQAMLENSGNLSFSSKEDDEMSKSALAAFREKEEEIDRMRTELHSKLQVR 60
           MQ+DQN PQQLQ MLENSGNLSFSSKEDDEMSKSALAAFREKEEEIDRMRTELH+KLQVR
Sbjct: 1   MQTDQNPPQQLQTMLENSGNLSFSSKEDDEMSKSALAAFREKEEEIDRMRTELHNKLQVR 60

Query: 61  LGRVQEESRRLSSLREELEAIGGDPMRKEIGQIRKKIDTLNKELKPLGVTCQKKEKEYKD 120
           LGRVQEESRRLSSLREELEAIGGDPMRKEIGQIRKKID LNKELKPLGVTCQKKEKEYKD
Sbjct: 61  LGRVQEESRRLSSLREELEAIGGDPMRKEIGQIRKKIDALNKELKPLGVTCQKKEKEYKD 120

Query: 121 ALDAFNEKNNEKVQLISKLMEMVGESEKLRLKRLEELSKHVDNTS 166
           ALD+FNEKNNEKVQLISKLMEMVGESEKLRLKRLEELSKHVDNTS
Sbjct: 121 ALDSFNEKNNEKVQLISKLMEMVGESEKLRLKRLEELSKHVDNTS 165

[Close]

BLAST of PI0012861 vs. ExPASy TrEMBL
Match: A0A0A0KHE9 (RAB6-interacting golgin OS=Cucumis sativus OX=3659 GN=Csa_6G450440 PE=3 SV=1)

HSP 1 Score: 289.7 bits (740), Expect = 7.9e-75
Identity = 158/165 (95.76%), Postives = 162/165 (98.18%), Query Frame = 0


Query: 1   MQSDQNQPQQLQAMLENSGNLSFSSKEDDEMSKSALAAFREKEEEIDRMRTELHSKLQVR 60
           MQSDQN PQQLQAMLENS NLSFSSKEDDEMSKSALAAFREKEEEIDRMRTEL++KLQ+R
Sbjct: 1   MQSDQNPPQQLQAMLENSANLSFSSKEDDEMSKSALAAFREKEEEIDRMRTELNNKLQLR 60

Query: 61  LGRVQEESRRLSSLREELEAIGGDPMRKEIGQIRKKIDTLNKELKPLGVTCQKKEKEYKD 120
           LGRVQEESRRLSSLREELEAIGGDPMRKEIGQIRKKID LNKELKPLGVTCQKKEKEYKD
Sbjct: 61  LGRVQEESRRLSSLREELEAIGGDPMRKEIGQIRKKIDALNKELKPLGVTCQKKEKEYKD 120

Query: 121 ALDAFNEKNNEKVQLISKLMEMVGESEKLRLKRLEELSKHVDNTS 166
           ALD+FNEKNNEKVQLISKLMEMVGESEKLRLKRLEELSKHVDNTS
Sbjct: 121 ALDSFNEKNNEKVQLISKLMEMVGESEKLRLKRLEELSKHVDNTS 165

[Close]

BLAST of PI0012861 vs. ExPASy TrEMBL
Match: A0A5A7SM04 (RAB6-interacting golgin OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold541G001330 PE=3 SV=1)

HSP 1 Score: 274.2 bits (700), Expect = 3.4e-70
Identity = 153/165 (92.73%), Postives = 156/165 (94.55%), Query Frame = 0


Query: 1   MQSDQNQPQQLQAMLENSGNLSFSSKEDDEMSKSALAAFREKEEEIDRMRTELHSKLQVR 60
           MQ+DQN PQQLQ MLENSGNLSFSSKEDDEMSKSALAAFREKEEEIDRMRTELH+KLQVR
Sbjct: 1   MQTDQNPPQQLQTMLENSGNLSFSSKEDDEMSKSALAAFREKEEEIDRMRTELHNKLQVR 60

Query: 61  LGRVQEESRRLSSLREELEAIGGDPMRKEIGQIRKKIDTLNKELKPLGVTCQKKEKEYKD 120
           LGRVQEESRRLSSLREELEAIGGDPMRKEIGQIRKKID LNKELKPLG      EKEYKD
Sbjct: 61  LGRVQEESRRLSSLREELEAIGGDPMRKEIGQIRKKIDALNKELKPLG------EKEYKD 120

Query: 121 ALDAFNEKNNEKVQLISKLMEMVGESEKLRLKRLEELSKHVDNTS 166
           ALD+FNEKNNEKVQLISKLMEMVGESEKLRLKRLEELSKHVDNTS
Sbjct: 121 ALDSFNEKNNEKVQLISKLMEMVGESEKLRLKRLEELSKHVDNTS 159

[Close]

BLAST of PI0012861 vs. ExPASy TrEMBL
Match: A0A6J1IS07 (RAB6-interacting golgin OS=Cucurbita maxima OX=3661 GN=LOC111478791 PE=3 SV=1)

HSP 1 Score: 257.3 bits (656), Expect = 4.4e-65
Identity = 140/163 (85.89%), Postives = 152/163 (93.25%), Query Frame = 0


Query: 1   MQSDQNQPQQLQAMLENSGNLSFSSKEDDEMSKSALAAFREKEEEIDRMRTELHSKLQVR 60
           MQ++QN PQQLQ ML+NSGNLSFSSKED+EMSKSAL+AFREKEEEI+RMRTEL  KLQ R
Sbjct: 1   MQNEQN-PQQLQVMLQNSGNLSFSSKEDEEMSKSALSAFREKEEEIERMRTELQQKLQAR 60

Query: 61  LGRVQEESRRLSSLREELEAIGGDPMRKEIGQIRKKIDTLNKELKPLGVTCQKKEKEYKD 120
           LGRV+EESRRL+S+REELE I GDP RKEIGQIRK+IDTLNKELKPLG  CQKKEKEYKD
Sbjct: 61  LGRVEEESRRLASIREELEGIDGDPTRKEIGQIRKRIDTLNKELKPLGQICQKKEKEYKD 120

Query: 121 ALDAFNEKNNEKVQLISKLMEMVGESEKLRLKRLEELSKHVDN 164
           ALDAFNEKNNEKVQ ISKLMEMVGESE++RLKRLEELSKHVDN
Sbjct: 121 ALDAFNEKNNEKVQCISKLMEMVGESERVRLKRLEELSKHVDN 162

[Close]

BLAST of PI0012861 vs. ExPASy TrEMBL
Match: A0A6J1EJF7 (RAB6-interacting golgin OS=Cucurbita moschata OX=3662 GN=LOC111433155 PE=3 SV=1)

HSP 1 Score: 255.0 bits (650), Expect = 2.2e-64
Identity = 139/165 (84.24%), Postives = 152/165 (92.12%), Query Frame = 0


Query: 1   MQSDQNQPQQLQAMLENSGNLSFSSKEDDEMSKSALAAFREKEEEIDRMRTELHSKLQVR 60
           MQ++QN PQQLQ ML+NSGNLSFSSKED+EMSKSAL+AFREKEEEI+RMRTEL  KLQ R
Sbjct: 1   MQNEQN-PQQLQVMLQNSGNLSFSSKEDEEMSKSALSAFREKEEEIERMRTELQQKLQAR 60

Query: 61  LGRVQEESRRLSSLREELEAIGGDPMRKEIGQIRKKIDTLNKELKPLGVTCQKKEKEYKD 120
           LGRV+EESRRL+S+REELE I GDP RKEIGQIRK+IDTLNKELKPLG  CQKKEKEYKD
Sbjct: 61  LGRVEEESRRLASIREELEGIDGDPTRKEIGQIRKRIDTLNKELKPLGQICQKKEKEYKD 120

Query: 121 ALDAFNEKNNEKVQLISKLMEMVGESEKLRLKRLEELSKHVDNTS 166
           ALDAFNEKNNEKV  ISKLMEMVGESE++RLKRLEELSKHVDN +
Sbjct: 121 ALDAFNEKNNEKVLCISKLMEMVGESERVRLKRLEELSKHVDNNT 164

[Close]

BLAST of PI0012861 vs. NCBI nr
Match: XP_008462544.1 (PREDICTED: uncharacterized protein LOC103500877 [Cucumis melo])

HSP 1 Score: 293.1 bits (749), Expect = 1.5e-75
Identity = 159/165 (96.36%), Postives = 162/165 (98.18%), Query Frame = 0


Query: 1   MQSDQNQPQQLQAMLENSGNLSFSSKEDDEMSKSALAAFREKEEEIDRMRTELHSKLQVR 60
           MQ+DQN PQQLQ MLENSGNLSFSSKEDDEMSKSALAAFREKEEEIDRMRTELH+KLQVR
Sbjct: 1   MQTDQNPPQQLQTMLENSGNLSFSSKEDDEMSKSALAAFREKEEEIDRMRTELHNKLQVR 60

Query: 61  LGRVQEESRRLSSLREELEAIGGDPMRKEIGQIRKKIDTLNKELKPLGVTCQKKEKEYKD 120
           LGRVQEESRRLSSLREELEAIGGDPMRKEIGQIRKKID LNKELKPLGVTCQKKEKEYKD
Sbjct: 61  LGRVQEESRRLSSLREELEAIGGDPMRKEIGQIRKKIDALNKELKPLGVTCQKKEKEYKD 120

Query: 121 ALDAFNEKNNEKVQLISKLMEMVGESEKLRLKRLEELSKHVDNTS 166
           ALD+FNEKNNEKVQLISKLMEMVGESEKLRLKRLEELSKHVDNTS
Sbjct: 121 ALDSFNEKNNEKVQLISKLMEMVGESEKLRLKRLEELSKHVDNTS 165

[Close]

BLAST of PI0012861 vs. NCBI nr
Match: XP_004143305.1 (uncharacterized protein LOC101209289 [Cucumis sativus] >KGN48239.1 hypothetical protein Csa_003193 [Cucumis sativus])

HSP 1 Score: 289.7 bits (740), Expect = 1.6e-74
Identity = 158/165 (95.76%), Postives = 162/165 (98.18%), Query Frame = 0


Query: 1   MQSDQNQPQQLQAMLENSGNLSFSSKEDDEMSKSALAAFREKEEEIDRMRTELHSKLQVR 60
           MQSDQN PQQLQAMLENS NLSFSSKEDDEMSKSALAAFREKEEEIDRMRTEL++KLQ+R
Sbjct: 1   MQSDQNPPQQLQAMLENSANLSFSSKEDDEMSKSALAAFREKEEEIDRMRTELNNKLQLR 60

Query: 61  LGRVQEESRRLSSLREELEAIGGDPMRKEIGQIRKKIDTLNKELKPLGVTCQKKEKEYKD 120
           LGRVQEESRRLSSLREELEAIGGDPMRKEIGQIRKKID LNKELKPLGVTCQKKEKEYKD
Sbjct: 61  LGRVQEESRRLSSLREELEAIGGDPMRKEIGQIRKKIDALNKELKPLGVTCQKKEKEYKD 120

Query: 121 ALDAFNEKNNEKVQLISKLMEMVGESEKLRLKRLEELSKHVDNTS 166
           ALD+FNEKNNEKVQLISKLMEMVGESEKLRLKRLEELSKHVDNTS
Sbjct: 121 ALDSFNEKNNEKVQLISKLMEMVGESEKLRLKRLEELSKHVDNTS 165

[Close]

BLAST of PI0012861 vs. NCBI nr
Match: XP_038882826.1 (uncharacterized protein LOC120073968 isoform X1 [Benincasa hispida])

HSP 1 Score: 277.7 bits (709), Expect = 6.4e-71
Identity = 151/165 (91.52%), Postives = 160/165 (96.97%), Query Frame = 0


Query: 1   MQSDQNQPQQLQAMLENSGNLSFSSKEDDEMSKSALAAFREKEEEIDRMRTELHSKLQVR 60
           MQSDQN PQQLQAML+NS +LSFSSKEDD+MSKSALAAFREKEEEIDRMR +LH+KLQVR
Sbjct: 1   MQSDQN-PQQLQAMLDNSASLSFSSKEDDDMSKSALAAFREKEEEIDRMRADLHNKLQVR 60

Query: 61  LGRVQEESRRLSSLREELEAIGGDPMRKEIGQIRKKIDTLNKELKPLGVTCQKKEKEYKD 120
           LGRVQEESRRL+S+REEL+AI GDPMRKEIGQIRKKID LNKELKPLG+TCQKKEKEYKD
Sbjct: 61  LGRVQEESRRLASIREELDAIAGDPMRKEIGQIRKKIDALNKELKPLGITCQKKEKEYKD 120

Query: 121 ALDAFNEKNNEKVQLISKLMEMVGESEKLRLKRLEELSKHVDNTS 166
           ALDAFNEKNNEKVQLISKLMEMVGESEKLRLKRLEELSKHVDNTS
Sbjct: 121 ALDAFNEKNNEKVQLISKLMEMVGESEKLRLKRLEELSKHVDNTS 164

[Close]

BLAST of PI0012861 vs. NCBI nr
Match: KAA0025281.1 (putative DNA double-strand break repair Rad50 ATPase isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 274.2 bits (700), Expect = 7.1e-70
Identity = 153/165 (92.73%), Postives = 156/165 (94.55%), Query Frame = 0


Query: 1   MQSDQNQPQQLQAMLENSGNLSFSSKEDDEMSKSALAAFREKEEEIDRMRTELHSKLQVR 60
           MQ+DQN PQQLQ MLENSGNLSFSSKEDDEMSKSALAAFREKEEEIDRMRTELH+KLQVR
Sbjct: 1   MQTDQNPPQQLQTMLENSGNLSFSSKEDDEMSKSALAAFREKEEEIDRMRTELHNKLQVR 60

Query: 61  LGRVQEESRRLSSLREELEAIGGDPMRKEIGQIRKKIDTLNKELKPLGVTCQKKEKEYKD 120
           LGRVQEESRRLSSLREELEAIGGDPMRKEIGQIRKKID LNKELKPLG      EKEYKD
Sbjct: 61  LGRVQEESRRLSSLREELEAIGGDPMRKEIGQIRKKIDALNKELKPLG------EKEYKD 120

Query: 121 ALDAFNEKNNEKVQLISKLMEMVGESEKLRLKRLEELSKHVDNTS 166
           ALD+FNEKNNEKVQLISKLMEMVGESEKLRLKRLEELSKHVDNTS
Sbjct: 121 ALDSFNEKNNEKVQLISKLMEMVGESEKLRLKRLEELSKHVDNTS 159

[Close]

BLAST of PI0012861 vs. NCBI nr
Match: XP_023543803.1 (uncharacterized protein LOC111803564 [Cucurbita pepo subsp. pepo] >KAG7034517.1 hypothetical protein SDJN02_04247 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 257.7 bits (657), Expect = 6.9e-65
Identity = 140/165 (84.85%), Postives = 153/165 (92.73%), Query Frame = 0


Query: 1   MQSDQNQPQQLQAMLENSGNLSFSSKEDDEMSKSALAAFREKEEEIDRMRTELHSKLQVR 60
           MQ++QN PQQLQ ML+NSGNLSFSSKED+EMSKSAL+AFREKEEEI+RMRTEL  KLQ R
Sbjct: 1   MQNEQN-PQQLQVMLQNSGNLSFSSKEDEEMSKSALSAFREKEEEIERMRTELQQKLQAR 60

Query: 61  LGRVQEESRRLSSLREELEAIGGDPMRKEIGQIRKKIDTLNKELKPLGVTCQKKEKEYKD 120
           LGRV+EESRRL+S+REELE I GDP RKEIGQIRK+IDTLNKELKPLG  CQKKEKEYKD
Sbjct: 61  LGRVEEESRRLASIREELEGIDGDPTRKEIGQIRKRIDTLNKELKPLGQICQKKEKEYKD 120

Query: 121 ALDAFNEKNNEKVQLISKLMEMVGESEKLRLKRLEELSKHVDNTS 166
           ALDAFNEKNNEKVQ ISKLMEMVGESE++RLKRLEELSKHVDN +
Sbjct: 121 ALDAFNEKNNEKVQCISKLMEMVGESERVRLKRLEELSKHVDNNT 164

[Close]

BLAST of PI0012861 vs. TAIR 10
Match: AT3G09980.1 (Family of unknown function (DUF662) )

HSP 1 Score: 183.3 bits (464), Expect = 1.5e-46
Identity = 100/158 (63.29%), Postives = 136/158 (86.08%), Query Frame = 0


Query: 9   QQLQAMLENSGNLSFS---SKEDDEMSKSALAAFREKEEEIDRMRTELHSKLQVRLGRVQ 68
           +QL A L  SG++SFS   SKED+EMS++AL+AFR KEEEI++ + E+  ++Q +LGRV+
Sbjct: 22  RQLGAQL--SGSMSFSSQMSKEDEEMSRTALSAFRAKEEEIEKKKMEIRERVQAQLGRVE 81

Query: 69  EESRRLSSLREELEAIGGDPMRKEIGQIRKKIDTLNKELKPLGVTCQKKEKEYKDALDAF 128
           EE++RL+ +REELE +  DPMRKE+  +RKKID++NKELKPLG T QKKE+EYK+AL+AF
Sbjct: 82  EETKRLALIREELEGL-ADPMRKEVAMVRKKIDSVNKELKPLGHTVQKKEREYKEALEAF 141

Query: 129 NEKNNEKVQLISKLMEMVGESEKLRLKRLEELSKHVDN 164
           NEKN EKVQLI++LME+VGESEK+R+K+LEELSK++D+
Sbjct: 142 NEKNREKVQLITRLMELVGESEKMRMKKLEELSKNIDS 176

[Close]

BLAST of PI0012861 vs. TAIR 10
Match: AT2G36410.2 (Family of unknown function (DUF662) )

HSP 1 Score: 181.4 bits (459), Expect = 5.8e-46
Identity = 101/162 (62.35%), Postives = 137/162 (84.57%), Query Frame = 0


Query: 5   QNQP-QQLQAMLENSGNLSFS---SKEDDEMSKSALAAFREKEEEIDRMRTELHSKLQVR 64
           Q QP QQ   M+ ++G+LSFS   S+ED+EM++SAL+AFR KE+EI++ R E+  ++Q +
Sbjct: 30  QPQPQQQSNEMVLHTGSLSFSSHMSREDEEMTRSALSAFRAKEDEIEKRRMEVRERIQAQ 89

Query: 65  LGRVQEESRRLSSLREELEAIGGDPMRKEIGQIRKKIDTLNKELKPLGVTCQKKEKEYKD 124
           LGRV++E++RLS++REELE++  DPMRKE+  +RKKID++NKELKPLG T QKKE+EYK+
Sbjct: 90  LGRVEQETKRLSTIREELESM-ADPMRKEVSVVRKKIDSVNKELKPLGSTVQKKEREYKE 149

Query: 125 ALDAFNEKNNEKVQLISKLMEMVGESEKLRLKRLEELSKHVD 163
           ALD FNEKN EKVQLI+KLME+VGESEKLR+ +LEELSK ++
Sbjct: 150 ALDTFNEKNREKVQLITKLMELVGESEKLRMIKLEELSKSIE 190

[Close]

BLAST of PI0012861 vs. TAIR 10
Match: AT3G52920.2 (Family of unknown function (DUF662) )

HSP 1 Score: 179.5 bits (454), Expect = 2.2e-45
Identity = 100/161 (62.11%), Postives = 132/161 (81.99%), Query Frame = 0


Query: 8   PQQLQAMLENSGNLSFS---SKEDDEMSKSALAAFREKEEEIDRMRTELHSKLQVRLGRV 67
           PQQ+        +LSFS   SKED+EM++SAL+AFR KE+EI++ + E+  +++ +LGRV
Sbjct: 12  PQQMM-------SLSFSSQMSKEDEEMARSALSAFRAKEDEIEKRKMEVRERVKAQLGRV 71

Query: 68  QEESRRLSSLREELEAIGGDPMRKEIGQIRKKIDTLNKELKPLGVTCQKKEKEYKDALDA 127
           +EE+RRL+S+REELE +  DPMRKE+  +RKKID++NKELKPLG T QKKE+EYK+ALD 
Sbjct: 72  EEETRRLASIREELETM-ADPMRKEVNWVRKKIDSVNKELKPLGSTVQKKEREYKEALDT 131

Query: 128 FNEKNNEKVQLISKLMEMVGESEKLRLKRLEELSKHVDNTS 166
           FNEKN EKVQLI+KLME+VGESEKLRLK+L+ELS+ +D  S
Sbjct: 132 FNEKNREKVQLITKLMELVGESEKLRLKKLDELSRSIDTES 164

[Close]

BLAST of PI0012861 vs. TAIR 10
Match: AT2G36410.3 (Family of unknown function (DUF662) )

HSP 1 Score: 177.6 bits (449), Expect = 8.4e-45
Identity = 100/162 (61.73%), Postives = 135/162 (83.33%), Query Frame = 0


Query: 5   QNQP-QQLQAMLENSGNLSFS---SKEDDEMSKSALAAFREKEEEIDRMRTELHSKLQVR 64
           Q QP QQ   M+ ++G+LSFS   S+ED+EM++SAL+AFR KE+EI++ R E+  ++Q +
Sbjct: 30  QPQPQQQSNEMVLHTGSLSFSSHMSREDEEMTRSALSAFRAKEDEIEKRRMEVRERIQAQ 89

Query: 65  LGRVQEESRRLSSLREELEAIGGDPMRKEIGQIRKKIDTLNKELKPLGVTCQKKEKEYKD 124
           LGRV++E++RLS++REELE++  DPMRKE+  +RKKID++NKELKPLG T QKK  EYK+
Sbjct: 90  LGRVEQETKRLSTIREELESM-ADPMRKEVSVVRKKIDSVNKELKPLGSTVQKKVMEYKE 149

Query: 125 ALDAFNEKNNEKVQLISKLMEMVGESEKLRLKRLEELSKHVD 163
           ALD FNEKN EKVQLI+KLME+VGESEKLR+ +LEELSK ++
Sbjct: 150 ALDTFNEKNREKVQLITKLMELVGESEKLRMIKLEELSKSIE 190

[Close]

BLAST of PI0012861 vs. TAIR 10
Match: AT2G36410.1 (Family of unknown function (DUF662) )

HSP 1 Score: 177.2 bits (448), Expect = 1.1e-44
Identity = 102/165 (61.82%), Postives = 137/165 (83.03%), Query Frame = 0


Query: 5   QNQP-QQLQAMLENSGNLSFS---SKEDDEMSKSALAAFREKEEEIDRMRTELHSKLQVR 64
           Q QP QQ   M+ ++G+LSFS   S+ED+EM++SAL+AFR KE+EI++ R E+  ++Q +
Sbjct: 30  QPQPQQQSNEMVLHTGSLSFSSHMSREDEEMTRSALSAFRAKEDEIEKRRMEVRERIQAQ 89

Query: 65  LGRVQEESRRLSSLREELEAIGGDPMRKEIGQIRKKIDTLNKELKPLGVTCQKKEKEYKD 124
           LGRV++E++RLS++REELE++  DPMRKE+  +RKKID++NKELKPLG T QKKE+EYK+
Sbjct: 90  LGRVEQETKRLSTIREELESM-ADPMRKEVSVVRKKIDSVNKELKPLGSTVQKKEREYKE 149

Query: 125 ALDAFNEKNNEKVQLISKLMEM---VGESEKLRLKRLEELSKHVD 163
           ALD FNEKN EKVQLI+KLMEM   VGESEKLR+ +LEELSK ++
Sbjct: 150 ALDTFNEKNREKVQLITKLMEMEQLVGESEKLRMIKLEELSKSIE 193

The following BLAST results are available for this feature:

BLAST of PI0012861 vs.


Match Name	E-value	Identity	Description

BLAST of PI0012861 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3CIS0	7.2e-76	96.36	RAB6-interacting golgin OS=Cucumis melo OX=3656 GN=LOC103500877 PE=3 SV=1	[more]
A0A0A0KHE9	7.9e-75	95.76	RAB6-interacting golgin OS=Cucumis sativus OX=3659 GN=Csa_6G450440 PE=3 SV=1	[more]
A0A5A7SM04	3.4e-70	92.73	RAB6-interacting golgin OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A6J1IS07	4.4e-65	85.89	RAB6-interacting golgin OS=Cucurbita maxima OX=3661 GN=LOC111478791 PE=3 SV=1	[more]
A0A6J1EJF7	2.2e-64	84.24	RAB6-interacting golgin OS=Cucurbita moschata OX=3662 GN=LOC111433155 PE=3 SV=1	[more]

BLAST of PI0012861 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008462544.1	1.5e-75	96.36	PREDICTED: uncharacterized protein LOC103500877 [Cucumis melo]	[more]
XP_004143305.1	1.6e-74	95.76	uncharacterized protein LOC101209289 [Cucumis sativus] >KGN48239.1 hypothetical ...	[more]
XP_038882826.1	6.4e-71	91.52	uncharacterized protein LOC120073968 isoform X1 [Benincasa hispida]	[more]
KAA0025281.1	7.1e-70	92.73	putative DNA double-strand break repair Rad50 ATPase isoform X2 [Cucumis melo va...	[more]
XP_023543803.1	6.9e-65	84.85	uncharacterized protein LOC111803564 [Cucurbita pepo subsp. pepo] >KAG7034517.1 ...	[more]

BLAST of PI0012861 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G09980.1	1.5e-46	63.29	Family of unknown function (DUF662)	[more]
AT2G36410.2	5.8e-46	62.35	Family of unknown function (DUF662)	[more]
AT3G52920.2	2.2e-45	62.11	Family of unknown function (DUF662)	[more]
AT2G36410.3	8.4e-45	61.73	Family of unknown function (DUF662)	[more]
AT2G36410.1	1.1e-44	61.82	Family of unknown function (DUF662)	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 111..131
None	No IPR available	COILS	Coil	Coil	coord: 32..52
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..34
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..25
None	No IPR available	PANTHER	PTHR21470:SF8	EXPRESSED PROTEIN	coord: 7..162
IPR007033	RAB6-interacting golgin	PFAM	PF04949	Transcrip_act	coord: 13..162 e-value: 1.2E-61 score: 207.1
IPR007033	RAB6-interacting golgin	PANTHER	PTHR21470	RAB6-INTERACTING PROTEIN GORAB	coord: 7..162

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0012861.1	PI0012861.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005794	Golgi apparatus