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PI0012776 (gene) Melon (PI 482460) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGCGTATCAAGCATTTATTAGTATCAGTTGTTCGAAAATTGGGTGAAGGTAAGTTATTCATTATGAAAATACTTTATTTGTTTATAATAGAAAAAAACTAACAATTTATTTAAAAACTTCAACAGAGTCATCCTGCTGCCAGGGGCCTCTTAAGCAAGCCATTTTCCCATTATGACGACTTGTGCTACGTATTTGGAAAAGATTGTGCCACGAGAGCTCACGCGGAGACATTCACTAATGTGGGGTTGAATGTGTCTAGAGGGTTCAAGGGATTTTTCGCTGATTATGGGAACGATACGGAGATCCCTATGATGTACAGTCAGAGACTAGACATGTCGCCTGATGACATCATGGGCACACGACCCGGTCGCTCGAGTGAGGGTAGGACTGGTTCAAGCGGATCGAAGAAGAAATGGGGAGGCCAGACGGTAGAGACTGTGGAAATCAATCGGAATGCAATGGACTTCGCCAATGATCAGCTGAAGGCCATTGCAGAGTGA ATGCGTATCAAGCATTTATTAGTATCAGTTGTTCGAAAATTGGGTGAAGGGTTCAAGGGATTTTTCGCTGATTATGGGAACGATACGGAGATCCCTATGATGTACAGTCAGAGACTAGACATGTCGCCTGATGACATCATGGGCACACGACCCGGTCGCTCGAGTGAGGGTAGGACTGGTTCAAGCGGATCGAAGAAGAAATGGGGAGGCCAGACGGTAGAGACTGTGGAAATCAATCGGAATGCAATGGACTTCGCCAATGATCAGCTGAAGGCCATTGCAGAGTGA ATGCGTATCAAGCATTTATTAGTATCAGTTGTTCGAAAATTGGGTGAAGGGTTCAAGGGATTTTTCGCTGATTATGGGAACGATACGGAGATCCCTATGATGTACAGTCAGAGACTAGACATGTCGCCTGATGACATCATGGGCACACGACCCGGTCGCTCGAGTGAGGGTAGGACTGGTTCAAGCGGATCGAAGAAGAAATGGGGAGGCCAGACGGTAGAGACTGTGGAAATCAATCGGAATGCAATGGACTTCGCCAATGATCAGCTGAAGGCCATTGCAGAGTGA MRIKHLLVSVVRKLGEGFKGFFADYGNDTEIPMMYSQRLDMSPDDIMGTRPGRSSEGRTGSSGSKKKWGGQTVETVEINRNAMDFANDQLKAIAE Homology
BLAST of PI0012776 vs. ExPASy TrEMBL
Match: A0A5A7V469 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold420G00340 PE=4 SV=1) HSP 1 Score: 117.1 bits (292), Expect = 4.1e-23 Identity = 58/80 (72.50%), Postives = 67/80 (83.75%), Query Frame = 0
BLAST of PI0012776 vs. ExPASy TrEMBL
Match: A0A5D3CL79 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold177G00920 PE=4 SV=1) HSP 1 Score: 100.5 bits (249), Expect = 3.9e-18 Identity = 53/90 (58.89%), Postives = 64/90 (71.11%), Query Frame = 0
BLAST of PI0012776 vs. ExPASy TrEMBL
Match: A0A5A7UZF5 (RING-H2 finger protein ATL66 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold39G00380 PE=4 SV=1) HSP 1 Score: 99.8 bits (247), Expect = 6.7e-18 Identity = 55/80 (68.75%), Postives = 62/80 (77.50%), Query Frame = 0
BLAST of PI0012776 vs. ExPASy TrEMBL
Match: A0A5A7UNI7 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold697G00630 PE=4 SV=1) HSP 1 Score: 98.6 bits (244), Expect = 1.5e-17 Identity = 48/79 (60.76%), Postives = 61/79 (77.22%), Query Frame = 0
BLAST of PI0012776 vs. ExPASy TrEMBL
Match: A0A5D3CAJ4 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold648G001830 PE=4 SV=1) HSP 1 Score: 97.1 bits (240), Expect = 4.3e-17 Identity = 48/81 (59.26%), Postives = 62/81 (76.54%), Query Frame = 0
BLAST of PI0012776 vs. NCBI nr
Match: KAA0060529.1 (retrotransposon protein [Cucumis melo var. makuwa] >TYK00769.1 retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 117.1 bits (292), Expect = 8.4e-23 Identity = 58/80 (72.50%), Postives = 67/80 (83.75%), Query Frame = 0
BLAST of PI0012776 vs. NCBI nr
Match: TYK11924.1 (retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 100.5 bits (249), Expect = 8.1e-18 Identity = 53/90 (58.89%), Postives = 64/90 (71.11%), Query Frame = 0
BLAST of PI0012776 vs. NCBI nr
Match: KAA0061292.1 (RING-H2 finger protein ATL66 [Cucumis melo var. makuwa] >TYK09869.1 RING-H2 finger protein ATL66 [Cucumis melo var. makuwa]) HSP 1 Score: 99.8 bits (247), Expect = 1.4e-17 Identity = 55/80 (68.75%), Postives = 62/80 (77.50%), Query Frame = 0
BLAST of PI0012776 vs. NCBI nr
Match: KAA0056167.1 (retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 98.6 bits (244), Expect = 3.1e-17 Identity = 48/79 (60.76%), Postives = 61/79 (77.22%), Query Frame = 0
BLAST of PI0012776 vs. NCBI nr
Match: TYK08370.1 (retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 97.1 bits (240), Expect = 9.0e-17 Identity = 48/81 (59.26%), Postives = 62/81 (76.54%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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