PI0012760 (gene) Melon (PI 482460) v1

Overview
NamePI0012760
Typegene
OrganismCucumis metuliferus (Melon (PI 482460) v1)
DescriptionRetrovirus-related Pol polyprotein from transposon 17.6
Locationchr03: 15258816 .. 15260463 (-)
RNA-Seq ExpressionPI0012760
SyntenyPI0012760
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAATGATGATGAACAACCCGAATTTGAGCTTGACCTTGAAAGTGAACGAACTTTTCGACGTAACAGAAAAAGAGGGAGGCAACGAAGAGCAAATAGAATGGCTAACAACAACAACCAGAATGTTCCTCCCCAACAAACTGCCCAAGAACAGAATGTTGCCTACAAGGCTCATGATTTAGATAGACCAATTAGGTCGTATGCTTCACCAAATCTCTATAACTTTAGCCTAGTGATCGCCTACCCTGTGTTCGGTGAGAATGCAAGATTGAGATCAAACCTGTTATGATACAGATGATCTAGAACGTCAGACAGTTTGACGGTCACCTTAGCGAAGATCCACACGAGCATATTCATAGTTTCTACTCCATTTGCGCTTCCTTTCACATGCCTTACATATCGCCTGAAGAGTTGTGATTTGTCCTCTTCTCGTCACATTGAGGGATGAGACAAAGAGATGGGCAAACTCTTTAGAGGATAGGGAGGTTGGAACATGAGACCAACTGATTGTGAAATTTATGAAGAAGTTCTTTCCACCCCATGAGAACGCTAGAAGAAGGAAGGAGCTTATGAGCTTCCAACAAAAGGATAAAGAAAACCTACATGACGCGTGAAGTGGGTTTAAGAGAATGGTAAAAGCATGCCCTCACAATGGCATTCCTGAATGCAAATTGTTGGAGGTGTTTTACTTTGGACTTAATAAGGGAACATAGCAAACTGCTGACGTTGTGTTTGTAGGGGGCATGTTGAAAAGCTCATACAACCAGATCAAGGCGATGCTGGATACGATGACCAGCAATAATGAAGAATGGGATGAAGATGATTTCGGCAATCGCCGAGGAGGAAGAGGAAGAAACGAGGAAGGATTAGATAAGAGCGTCGTGGTGTCGTTGCAAGGACAAATGACTGCGATGAATAATCTGTTGAAATCAATGGTGATTTCGCAAGTTAACATGGCCGACAGCTCTATTCAAGCGGTCAATCAATTAGATGAAATGGGATGCGTGGGATGCGACGATCCTCACAACACCGACGTGTGCCCAATGAATACAGAGACAGTCGCATACGTCAGGAATGACCCTTACTCTAACACGTAAAATCCTGGTTAGAAGAACCACCCTAAATTTGGGTGGGGAGGAACGGGTCAACAAAATCAAGGATGATAAGGTGGTCAAGGTGACCATCGCGGTGAGTCATCTGGCTATTACCCAAGGCACCACAACAATAGACCATAACAATAGACCACAACATCCCAACACCAACAATAGAAAACCATCACTACTCCATCCTCATCCTCATCAATGGAAAACCTCCTCCGCGAATACATGCAGAAGAATGATGCCCTTCTGCAAAGTTAAGTCTCATCTATTCACAATCTGGAAGTACAGTTGGGGCAGATGGCCAGTGATTTCTCTGGAAGGCCACAAGGATCACTCCCAAGCAACAGTCAAATGCCTAGTCAGGCGGAAGGATCCAGAAAAGAGAAGTGTCAAACAAGAACACTGCGCAGCGAAAGGAATTTGACCATTCGTGATGCTGAAACTGAACGTAAAAACCCCGCTTCTATTTCTACTGCTAAGATCAGCAGCACAAGTAATAATTCCGATCTCTTAAATTTCTCTTTAACTAACAATGTTTCTTCCTCGTAA

mRNA sequence

ATGAATGATGATGAACAACCCGAATTTGAGCTTGACCTTGAAAGTGAACGAACTTTTCGACGTAACAGAAAAAGAGGGAGGCAACGAAGAGCAAATAGAATGGCTAACAACAACAACCAGAATGTTCCTCCCCAACAAACTGCCCAAGAACAGAATGTTGCCTACAAGGCTCATGATTTAGATAGACCAATTAGGTCGTATGCTTCACCAAATCTCTATAACTTTAGCCTAGTGATCGCCTACCCTGTGTTCGGGGGCATGTTGAAAAGCTCATACAACCAGATCAAGGCGATGCTGGATACGATGACCAGCAATAATGAAGAATGGGATGAAGATGATTTCGGCAATCGCCGAGGAGGAAGAGGAAGAAACGAGGAAGGATTAGATAAGAGCGTCGTGGTGTCGTTGCAAGGACAAATGACTGCGATGAATAATCTGTTGAAATCAATGGTGATTTCGCAAGTTAACATGGCCGACAGCTCTATTCAAGCGGTCAATCAATTAGATGAAATGGGATGCGTGGGATGCGACGATCCTCACAACACCGACGTGTGCCCAATGAATACAGAGACAGTCGCATACGTCAGGAATGACCCTTACTCTAACACAACCACCCTAAATTTGGGTGGGGAGGAACGGGTCAACAAAATCAAGGATGATAAGGTGGTCAAGGTGACCATCGCGGTGAGTCATCTGGCTATTACCCAAGGCACCACAACAATAGACCATAACAATAGACCACAACATCCCAACACCAACAATAGAAAACCATCACTACTCCATCCTCATCCTCATCAATGGAAAACCTCCTCCGCGAATACATGCAGAAGAATGATGCCCTTCTGCAAATTGGGGCAGATGGCCAGTGATTTCTCTGGAAGGCCACAAGGATCACTCCCAAGCAACAGTCAAATGCCTAGTCAGGCGGAAGGATCCAGAAAAGAGAAGTGTCAAACAAGAACACTGCGCAGCGAAAGGAATTTGACCATTCGTGATGCTGAAACTGAACGTAAAAACCCCGCTTCTATTTCTACTGCTAAGATCAGCAGCACAAGTAATAATTCCGATCTCTTAAATTTCTCTTTAACTAACAATGTTTCTTCCTCGTAA

Coding sequence (CDS)

ATGAATGATGATGAACAACCCGAATTTGAGCTTGACCTTGAAAGTGAACGAACTTTTCGACGTAACAGAAAAAGAGGGAGGCAACGAAGAGCAAATAGAATGGCTAACAACAACAACCAGAATGTTCCTCCCCAACAAACTGCCCAAGAACAGAATGTTGCCTACAAGGCTCATGATTTAGATAGACCAATTAGGTCGTATGCTTCACCAAATCTCTATAACTTTAGCCTAGTGATCGCCTACCCTGTGTTCGGGGGCATGTTGAAAAGCTCATACAACCAGATCAAGGCGATGCTGGATACGATGACCAGCAATAATGAAGAATGGGATGAAGATGATTTCGGCAATCGCCGAGGAGGAAGAGGAAGAAACGAGGAAGGATTAGATAAGAGCGTCGTGGTGTCGTTGCAAGGACAAATGACTGCGATGAATAATCTGTTGAAATCAATGGTGATTTCGCAAGTTAACATGGCCGACAGCTCTATTCAAGCGGTCAATCAATTAGATGAAATGGGATGCGTGGGATGCGACGATCCTCACAACACCGACGTGTGCCCAATGAATACAGAGACAGTCGCATACGTCAGGAATGACCCTTACTCTAACACAACCACCCTAAATTTGGGTGGGGAGGAACGGGTCAACAAAATCAAGGATGATAAGGTGGTCAAGGTGACCATCGCGGTGAGTCATCTGGCTATTACCCAAGGCACCACAACAATAGACCATAACAATAGACCACAACATCCCAACACCAACAATAGAAAACCATCACTACTCCATCCTCATCCTCATCAATGGAAAACCTCCTCCGCGAATACATGCAGAAGAATGATGCCCTTCTGCAAATTGGGGCAGATGGCCAGTGATTTCTCTGGAAGGCCACAAGGATCACTCCCAAGCAACAGTCAAATGCCTAGTCAGGCGGAAGGATCCAGAAAAGAGAAGTGTCAAACAAGAACACTGCGCAGCGAAAGGAATTTGACCATTCGTGATGCTGAAACTGAACGTAAAAACCCCGCTTCTATTTCTACTGCTAAGATCAGCAGCACAAGTAATAATTCCGATCTCTTAAATTTCTCTTTAACTAACAATGTTTCTTCCTCGTAA

Protein sequence

MNDDEQPEFELDLESERTFRRNRKRGRQRRANRMANNNNQNVPPQQTAQEQNVAYKAHDLDRPIRSYASPNLYNFSLVIAYPVFGGMLKSSYNQIKAMLDTMTSNNEEWDEDDFGNRRGGRGRNEEGLDKSVVVSLQGQMTAMNNLLKSMVISQVNMADSSIQAVNQLDEMGCVGCDDPHNTDVCPMNTETVAYVRNDPYSNTTTLNLGGEERVNKIKDDKVVKVTIAVSHLAITQGTTTIDHNNRPQHPNTNNRKPSLLHPHPHQWKTSSANTCRRMMPFCKLGQMASDFSGRPQGSLPSNSQMPSQAEGSRKEKCQTRTLRSERNLTIRDAETERKNPASISTAKISSTSNNSDLLNFSLTNNVSSS
Homology
BLAST of PI0012760 vs. ExPASy TrEMBL
Match: A0A5D3CSC7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1610G00360 PE=4 SV=1)

HSP 1 Score: 147.5 bits (371), Expect = 1.1e-31
Identity = 72/114 (63.16%), Postives = 88/114 (77.19%), Query Frame = 0

Query: 90  SSYNQIKAMLDTMTSNNEEWDEDDFGNRRGGRGRNEEGLDKSVVVSLQGQMTAMNNLLKS 149
           SSYNQI   LD++  NNEEWD+D F + RGGRG+NEEGLD++V+V  QGQMTAMNNLL+ 
Sbjct: 25  SSYNQINETLDSIAINNEEWDDDGFDSHRGGRGKNEEGLDRNVMVVPQGQMTAMNNLLQL 84

Query: 150 MVISQVNMADSSIQAVNQLDEMGCVGCDDPHNTDVCPMNTETVAYVRNDPYSNT 204
           MV  QVN A SS Q+V Q+DE+GC+    PH  D CP+N E VAYV++DPYSNT
Sbjct: 85  MVFLQVNAASSSFQSVKQVDEIGCMRFGSPHKIDACPLNIEIVAYVKHDPYSNT 138

BLAST of PI0012760 vs. ExPASy TrEMBL
Match: A0A5D3CC26 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold265G00270 PE=4 SV=1)

HSP 1 Score: 142.9 bits (359), Expect = 2.7e-30
Identity = 80/176 (45.45%), Postives = 115/176 (65.34%), Query Frame = 0

Query: 85  GGMLKSSYNQIKAMLDTMTSNNEEWDEDDFGNR------RGGRGRNEEGLDKSVVVSLQG 144
           GGML+SSYNQIK MLDTM SN++EW ++ FG+R      +G RGR E+G+D S++V+LQG
Sbjct: 57  GGMLRSSYNQIKNMLDTMASNSQEWRDESFGSRNDSRGTKGNRGRIEDGIDMSIMVALQG 116

Query: 145 QMTAMNNLLKSMVISQVNMADSSIQAVNQLDEMGCVGCDDPHNTDVCPMNTETVAYVRND 204
           Q+  M N+L+SM + QVN+  SS+Q V Q++EMGCVGC  PHNT+ CP+NTE VAY++ND
Sbjct: 117 QVIEM-NILQSMALLQVNVVRSSVQMVQQVNEMGCVGCRAPHNTNACPLNTEIVAYLKND 176

Query: 205 PYSNTTTLNLGGEERVNKIKDDKVVKVTIAVSHLAITQGTTTIDHNNRPQHPNTNN 255
           P      +  GGE         ++     ++ ++ +  G  T D + RP+    +N
Sbjct: 177 P--TPIHIMWGGE-------TTQISSQASSIKNMELQLGQLTSDFSRRPKRSFPSN 222

BLAST of PI0012760 vs. ExPASy TrEMBL
Match: A0A5D3D2S0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold306G00800 PE=4 SV=1)

HSP 1 Score: 136.3 bits (342), Expect = 2.5e-28
Identity = 97/250 (38.80%), Postives = 132/250 (52.80%), Query Frame = 0

Query: 87  MLKSSYNQIKAMLDTMTSNNEEWDEDDFGNRRGGRGRNEEGLDKSVVVSLQGQMTAMNNL 146
           ML+SSY QIK  LD +T+N++E  +DD   +   RGR + G+D++V+V+LQGQ+T M  L
Sbjct: 1   MLQSSYYQIKTTLDAITNNSQELRDDDLRLQHESRGRTDAGMDRNVIVALQGQVTKMKKL 60

Query: 147 LKSMVISQVNMADSSIQAVNQLDEMGCVGCDDPHNTDVCPMNTETVAYVRNDPYSNTTTL 206
           L+SM +SQV+   + +QAV Q+DEM  VGC +PH TD C +N E  AYV++ PYSNT   
Sbjct: 61  LQSMALSQVDAVGNYVQAVKQVDEMRPVGCGEPHTTDACLLNAEIAAYVKSYPYSNTYNA 120

Query: 207 -NLGGEERVNKIKDDKVVKVTIAVSHLAITQGTTTIDHNNRPQHPNTNNRKPS------- 266
            N  GE                A  H    Q      H + PQH       PS       
Sbjct: 121 GNYRGE----------------APDH---RQRHYDRPHYSAPQHQQATTNTPSSFSSMVA 180

Query: 267 LLHPHPHQWKT-SSANTCRRMMPFCKLGQMASDFSGRPQGSLPSNSQMPSQAEGSRKEKC 326
           LL  +  +      + T   +     LGQ+A DFSGRP GSLPSN ++P+   G  K K 
Sbjct: 181 LLRKYMQRKDAFMQSQTTSIINLEIHLGQLAKDFSGRPHGSLPSNIEVPNHNNGVHKNKG 231

Query: 327 QTRTLRSERN 328
                R E++
Sbjct: 241 MEIPRRHEQH 231

BLAST of PI0012760 vs. ExPASy TrEMBL
Match: A0A5A7U2P4 (Integrase catalytic domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold133G00730 PE=4 SV=1)

HSP 1 Score: 112.5 bits (280), Expect = 3.9e-21
Identity = 89/225 (39.56%), Postives = 114/225 (50.67%), Query Frame = 0

Query: 128 LDKSVVVSLQGQMTAMNNLLKSMVISQVNMADSSIQAVNQLDEMGCVGCDDPHNTDVCPM 187
           ++K  +V+L GQ+T MN LL+SMV S                             ++ P+
Sbjct: 1   MNKKAMVALLGQVTEMNKLLQSMVFSM----------------------------NLTPI 60

Query: 188 NTETVAYVRNDPYSNTTTLNLGGEERVNKIKDDKVVKVTIAVSHLAITQGTTTIDHNNRP 247
            T  V  +            L GE R  KIKDD+VV+V I V HLAI +     DH    
Sbjct: 61  PTMLVGEI---------IPTLVGEGRAKKIKDDRVVRVIIVVKHLAIDKDNIKTDHT--I 120

Query: 248 QHPNTNNRKPSLLHPHPHQWKTSSANTCRRMMPFCKLGQMASDFSGRPQGSLPSNSQMPS 307
           QH N NN+  +LLHP PH WK          + F KL Q+A DF G+P GSLPSN+++P 
Sbjct: 121 QHLN-NNKLSALLHPPPHLWK----------LFFAKLRQLADDFIGKPSGSLPSNTKIPD 174

Query: 308 QAEGSRKEKCQTRTLRSERNLTIRDAETERKNPASISTAKISSTS 353
           Q  GSRKEKCQ  TLRSER + I D   E +N  S   AK ++ S
Sbjct: 181 QVGGSRKEKCQAVTLRSER-IFIYDPNPEHRNSISRPNAKNATPS 174

BLAST of PI0012760 vs. ExPASy TrEMBL
Match: A0A5D3CGY4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold73G00460 PE=4 SV=1)

HSP 1 Score: 111.7 bits (278), Expect = 6.6e-21
Identity = 62/138 (44.93%), Postives = 84/138 (60.87%), Query Frame = 0

Query: 154 QVNMADSSIQAVNQLDEMGCVGCDDPHNTDVCPMNTETVAYVR-------NDPYSNTTTL 213
           QVN A S + A+ Q+ E+GCVGC+ PHNT+ CP N E  A+V+       ND + N    
Sbjct: 4   QVNAAGSPVHAIQQVAELGCVGCEGPHNTNACPRNIEIFAHVKITHSNTYNDGWRNHPNF 63

Query: 214 NLGGEERVNKIKDDKVVKVTIAVSHLAITQGTTTIDHNNRPQHPNTNNRKPSLLHPHPHQ 273
           + G + ++  +K  + VK+ IA  HLAI++G T  DH  +     T N+ P L HP+P Q
Sbjct: 64  SWGVKNKI--VKGGRAVKLLIATKHLAISKGNTMRDHAIQIL---TINKPPPLFHPYP-Q 123

Query: 274 WKTSSANTCRRMMPFCKL 285
           WK  SANTCR MMPFCK+
Sbjct: 124 WKPYSANTCRGMMPFCKV 135

BLAST of PI0012760 vs. NCBI nr
Match: KAA0038192.1 (hypothetical protein E6C27_scaffold270G00250 [Cucumis melo var. makuwa] >TYK14793.1 hypothetical protein E5676_scaffold1610G00360 [Cucumis melo var. makuwa])

HSP 1 Score: 147.5 bits (371), Expect = 2.2e-31
Identity = 72/114 (63.16%), Postives = 88/114 (77.19%), Query Frame = 0

Query: 90  SSYNQIKAMLDTMTSNNEEWDEDDFGNRRGGRGRNEEGLDKSVVVSLQGQMTAMNNLLKS 149
           SSYNQI   LD++  NNEEWD+D F + RGGRG+NEEGLD++V+V  QGQMTAMNNLL+ 
Sbjct: 25  SSYNQINETLDSIAINNEEWDDDGFDSHRGGRGKNEEGLDRNVMVVPQGQMTAMNNLLQL 84

Query: 150 MVISQVNMADSSIQAVNQLDEMGCVGCDDPHNTDVCPMNTETVAYVRNDPYSNT 204
           MV  QVN A SS Q+V Q+DE+GC+    PH  D CP+N E VAYV++DPYSNT
Sbjct: 85  MVFLQVNAASSSFQSVKQVDEIGCMRFGSPHKIDACPLNIEIVAYVKHDPYSNT 138

BLAST of PI0012760 vs. NCBI nr
Match: KAA0048713.1 (hypothetical protein E6C27_scaffold43G00050 [Cucumis melo var. makuwa] >TYK07916.1 hypothetical protein E5676_scaffold265G00270 [Cucumis melo var. makuwa])

HSP 1 Score: 142.9 bits (359), Expect = 5.5e-30
Identity = 80/176 (45.45%), Postives = 115/176 (65.34%), Query Frame = 0

Query: 85  GGMLKSSYNQIKAMLDTMTSNNEEWDEDDFGNR------RGGRGRNEEGLDKSVVVSLQG 144
           GGML+SSYNQIK MLDTM SN++EW ++ FG+R      +G RGR E+G+D S++V+LQG
Sbjct: 57  GGMLRSSYNQIKNMLDTMASNSQEWRDESFGSRNDSRGTKGNRGRIEDGIDMSIMVALQG 116

Query: 145 QMTAMNNLLKSMVISQVNMADSSIQAVNQLDEMGCVGCDDPHNTDVCPMNTETVAYVRND 204
           Q+  M N+L+SM + QVN+  SS+Q V Q++EMGCVGC  PHNT+ CP+NTE VAY++ND
Sbjct: 117 QVIEM-NILQSMALLQVNVVRSSVQMVQQVNEMGCVGCRAPHNTNACPLNTEIVAYLKND 176

Query: 205 PYSNTTTLNLGGEERVNKIKDDKVVKVTIAVSHLAITQGTTTIDHNNRPQHPNTNN 255
           P      +  GGE         ++     ++ ++ +  G  T D + RP+    +N
Sbjct: 177 P--TPIHIMWGGE-------TTQISSQASSIKNMELQLGQLTSDFSRRPKRSFPSN 222

BLAST of PI0012760 vs. NCBI nr
Match: KAA0040852.1 (hypothetical protein E6C27_scaffold333G00770 [Cucumis melo var. makuwa] >TYK17828.1 hypothetical protein E5676_scaffold306G00800 [Cucumis melo var. makuwa])

HSP 1 Score: 136.3 bits (342), Expect = 5.2e-28
Identity = 97/250 (38.80%), Postives = 132/250 (52.80%), Query Frame = 0

Query: 87  MLKSSYNQIKAMLDTMTSNNEEWDEDDFGNRRGGRGRNEEGLDKSVVVSLQGQMTAMNNL 146
           ML+SSY QIK  LD +T+N++E  +DD   +   RGR + G+D++V+V+LQGQ+T M  L
Sbjct: 1   MLQSSYYQIKTTLDAITNNSQELRDDDLRLQHESRGRTDAGMDRNVIVALQGQVTKMKKL 60

Query: 147 LKSMVISQVNMADSSIQAVNQLDEMGCVGCDDPHNTDVCPMNTETVAYVRNDPYSNTTTL 206
           L+SM +SQV+   + +QAV Q+DEM  VGC +PH TD C +N E  AYV++ PYSNT   
Sbjct: 61  LQSMALSQVDAVGNYVQAVKQVDEMRPVGCGEPHTTDACLLNAEIAAYVKSYPYSNTYNA 120

Query: 207 -NLGGEERVNKIKDDKVVKVTIAVSHLAITQGTTTIDHNNRPQHPNTNNRKPS------- 266
            N  GE                A  H    Q      H + PQH       PS       
Sbjct: 121 GNYRGE----------------APDH---RQRHYDRPHYSAPQHQQATTNTPSSFSSMVA 180

Query: 267 LLHPHPHQWKT-SSANTCRRMMPFCKLGQMASDFSGRPQGSLPSNSQMPSQAEGSRKEKC 326
           LL  +  +      + T   +     LGQ+A DFSGRP GSLPSN ++P+   G  K K 
Sbjct: 181 LLRKYMQRKDAFMQSQTTSIINLEIHLGQLAKDFSGRPHGSLPSNIEVPNHNNGVHKNKG 231

Query: 327 QTRTLRSERN 328
                R E++
Sbjct: 241 MEIPRRHEQH 231

BLAST of PI0012760 vs. NCBI nr
Match: KAA0047821.1 (uncharacterized protein E6C27_scaffold133G00730 [Cucumis melo var. makuwa])

HSP 1 Score: 112.5 bits (280), Expect = 8.0e-21
Identity = 89/225 (39.56%), Postives = 114/225 (50.67%), Query Frame = 0

Query: 128 LDKSVVVSLQGQMTAMNNLLKSMVISQVNMADSSIQAVNQLDEMGCVGCDDPHNTDVCPM 187
           ++K  +V+L GQ+T MN LL+SMV S                             ++ P+
Sbjct: 1   MNKKAMVALLGQVTEMNKLLQSMVFSM----------------------------NLTPI 60

Query: 188 NTETVAYVRNDPYSNTTTLNLGGEERVNKIKDDKVVKVTIAVSHLAITQGTTTIDHNNRP 247
            T  V  +            L GE R  KIKDD+VV+V I V HLAI +     DH    
Sbjct: 61  PTMLVGEI---------IPTLVGEGRAKKIKDDRVVRVIIVVKHLAIDKDNIKTDHT--I 120

Query: 248 QHPNTNNRKPSLLHPHPHQWKTSSANTCRRMMPFCKLGQMASDFSGRPQGSLPSNSQMPS 307
           QH N NN+  +LLHP PH WK          + F KL Q+A DF G+P GSLPSN+++P 
Sbjct: 121 QHLN-NNKLSALLHPPPHLWK----------LFFAKLRQLADDFIGKPSGSLPSNTKIPD 174

Query: 308 QAEGSRKEKCQTRTLRSERNLTIRDAETERKNPASISTAKISSTS 353
           Q  GSRKEKCQ  TLRSER + I D   E +N  S   AK ++ S
Sbjct: 181 QVGGSRKEKCQAVTLRSER-IFIYDPNPEHRNSISRPNAKNATPS 174

BLAST of PI0012760 vs. NCBI nr
Match: TYK11061.1 (hypothetical protein E5676_scaffold73G00460 [Cucumis melo var. makuwa])

HSP 1 Score: 111.7 bits (278), Expect = 1.4e-20
Identity = 62/138 (44.93%), Postives = 84/138 (60.87%), Query Frame = 0

Query: 154 QVNMADSSIQAVNQLDEMGCVGCDDPHNTDVCPMNTETVAYVR-------NDPYSNTTTL 213
           QVN A S + A+ Q+ E+GCVGC+ PHNT+ CP N E  A+V+       ND + N    
Sbjct: 4   QVNAAGSPVHAIQQVAELGCVGCEGPHNTNACPRNIEIFAHVKITHSNTYNDGWRNHPNF 63

Query: 214 NLGGEERVNKIKDDKVVKVTIAVSHLAITQGTTTIDHNNRPQHPNTNNRKPSLLHPHPHQ 273
           + G + ++  +K  + VK+ IA  HLAI++G T  DH  +     T N+ P L HP+P Q
Sbjct: 64  SWGVKNKI--VKGGRAVKLLIATKHLAISKGNTMRDHAIQIL---TINKPPPLFHPYP-Q 123

Query: 274 WKTSSANTCRRMMPFCKL 285
           WK  SANTCR MMPFCK+
Sbjct: 124 WKPYSANTCRGMMPFCKV 135

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5D3CSC71.1e-3163.16Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5D3CC262.7e-3045.45Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5D3D2S02.5e-2838.80Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5A7U2P43.9e-2139.56Integrase catalytic domain-containing protein OS=Cucumis melo var. makuwa OX=119... [more]
A0A5D3CGY46.6e-2144.93Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
Match NameE-valueIdentityDescription
KAA0038192.12.2e-3163.16hypothetical protein E6C27_scaffold270G00250 [Cucumis melo var. makuwa] >TYK1479... [more]
KAA0048713.15.5e-3045.45hypothetical protein E6C27_scaffold43G00050 [Cucumis melo var. makuwa] >TYK07916... [more]
KAA0040852.15.2e-2838.80hypothetical protein E6C27_scaffold333G00770 [Cucumis melo var. makuwa] >TYK1782... [more]
KAA0047821.18.0e-2139.56uncharacterized protein E6C27_scaffold133G00730 [Cucumis melo var. makuwa][more]
TYK11061.11.4e-2044.93hypothetical protein E5676_scaffold73G00460 [Cucumis melo var. makuwa][more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 291..312
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 106..125
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 313..338
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 339..369
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 110..125
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 287..369
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 238..271
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 32..46
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..46

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
PI0012760.1PI0012760.1mRNA