PI0012396 (gene) Melon (PI 482460) v1

Overview
NamePI0012396
Typegene
OrganismCucumis metuliferus (Melon (PI 482460) v1)
DescriptionSerine/threonine-protein phosphatase 7 long form-like protein isoform X1
Locationchr05: 17742913 .. 17743107 (+)
RNA-Seq ExpressionPI0012396
SyntenyPI0012396
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAATGCTACTTATTGTCCAACTTCAAGCGTTGTTATGACGGTCGATTCCATCCAATACAACATCCAGACTACTGGCCAGAGTTATCACTCACTGAAGTTCGCCCAAATGCGAACTTACTTAGAGAACCCAGTCGACCTAGAACTACTAGGATCCATAATGAAATGGATTGGGTGGAGTCCGATCAATCAGTAA

mRNA sequence

ATGAATGCTACTTATTGTCCAACTTCAAGCGTTGTTATGACGGTCGATTCCATCCAATACAACATCCAGACTACTGGCCAGAGTTATCACTCACTGAAGTTCGCCCAAATGCGAACTTACTTAGAGAACCCAGTCGACCTAGAACTACTAGGATCCATAATGAAATGGATTGGGTGGAGTCCGATCAATCAGTAA

Coding sequence (CDS)

ATGAATGCTACTTATTGTCCAACTTCAAGCGTTGTTATGACGGTCGATTCCATCCAATACAACATCCAGACTACTGGCCAGAGTTATCACTCACTGAAGTTCGCCCAAATGCGAACTTACTTAGAGAACCCAGTCGACCTAGAACTACTAGGATCCATAATGAAATGGATTGGGTGGAGTCCGATCAATCAGTAA

Protein sequence

MNATYCPTSSVVMTVDSIQYNIQTTGQSYHSLKFAQMRTYLENPVDLELLGSIMKWIGWSPINQ
Homology
BLAST of PI0012396 vs. ExPASy TrEMBL
Match: A0A0A0KPT2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G582750 PE=4 SV=1)

HSP 1 Score: 87.4 bits (215), Expect = 2.3e-14
Identity = 45/64 (70.31%), Postives = 49/64 (76.56%), Query Frame = 0

Query: 1  MNATYCPTSSVVMTVDSIQYNIQTTGQSYHSLKFAQMRTYLENPVDLELLGSIMKWIGWS 60
          MNAT C  S+VVMTV SIQ N Q  GQ YHSLKFA M+TYL+NPVD EL GS MKWIG S
Sbjct: 1  MNATCCRHSNVVMTVASIQSNTQIIGQRYHSLKFAPMQTYLKNPVDQELQGSKMKWIGKS 60

Query: 61 PINQ 65
           +NQ
Sbjct: 61 LVNQ 64

BLAST of PI0012396 vs. ExPASy TrEMBL
Match: A0A5A7T0Q1 (Serine/threonine-protein phosphatase 7 long form-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold57G002710 PE=4 SV=1)

HSP 1 Score: 84.3 bits (207), Expect = 2.0e-13
Identity = 43/63 (68.25%), Postives = 49/63 (77.78%), Query Frame = 0

Query: 1   MNATYCPTSSVVMTVDSIQYNIQTTGQSYHSLKFAQMRTYLENPVDLELLGSIMKWIGWS 60
           MNAT C T + VM+VD IQ N QT G SYHSLKFAQMRTYL++ +D EL GSIMKWIG S
Sbjct: 52  MNATCCQTLNDVMSVDYIQSNTQTIGLSYHSLKFAQMRTYLKDLIDQELPGSIMKWIGKS 111

Query: 61  PIN 64
            +N
Sbjct: 112 LVN 114

BLAST of PI0012396 vs. ExPASy TrEMBL
Match: A0A5A7U7U0 (Serine/threonine-protein phosphatase 7 long form-like protein isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold60G004770 PE=4 SV=1)

HSP 1 Score: 82.0 bits (201), Expect = 9.7e-13
Identity = 43/63 (68.25%), Postives = 48/63 (76.19%), Query Frame = 0

Query: 1  MNATYCPTSSVVMTVDSIQYNIQTTGQSYHSLKFAQMRTYLENPVDLELLGSIMKWIGWS 60
          MNAT C TS+ VM VDSIQ NIQ  G S HS KFAQM+TYL++PVD E  GSIMKWIG S
Sbjct: 17 MNATCCRTSNNVMPVDSIQSNIQIIGLSCHSPKFAQMQTYLKDPVDREQQGSIMKWIGKS 76

Query: 61 PIN 64
           +N
Sbjct: 77 LVN 79

BLAST of PI0012396 vs. ExPASy TrEMBL
Match: A0A5A7TI34 (Serine/threonine-protein phosphatase 7 long form-like protein isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold75G00540 PE=4 SV=1)

HSP 1 Score: 80.1 bits (196), Expect = 3.7e-12
Identity = 42/63 (66.67%), Postives = 47/63 (74.60%), Query Frame = 0

Query: 1   MNATYCPTSSVVMTVDSIQYNIQTTGQSYHSLKFAQMRTYLENPVDLELLGSIMKWIGWS 60
           MNAT C TS+ VM VDSIQ N Q  G S HS KFAQM+TYL++PVD E  GSIMKWIG S
Sbjct: 342 MNATCCRTSNNVMPVDSIQSNTQIIGLSCHSPKFAQMQTYLKDPVDREQQGSIMKWIGKS 401

Query: 61  PIN 64
            +N
Sbjct: 402 LVN 404

BLAST of PI0012396 vs. ExPASy TrEMBL
Match: A0A5A7SNK7 (Serine/threonine-protein phosphatase 7 long form-like protein isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold848G00830 PE=4 SV=1)

HSP 1 Score: 80.1 bits (196), Expect = 3.7e-12
Identity = 42/63 (66.67%), Postives = 47/63 (74.60%), Query Frame = 0

Query: 1   MNATYCPTSSVVMTVDSIQYNIQTTGQSYHSLKFAQMRTYLENPVDLELLGSIMKWIGWS 60
           MNAT C TS+ VM VDSIQ N Q  G S HS KFAQM+TYL++PVD E  GSIMKWIG S
Sbjct: 105 MNATCCRTSNNVMPVDSIQSNTQIIGLSCHSPKFAQMQTYLKDPVDREQQGSIMKWIGKS 164

Query: 61  PIN 64
            +N
Sbjct: 165 LVN 167

BLAST of PI0012396 vs. NCBI nr
Match: KAA0035171.1 (serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 84.3 bits (207), Expect = 4.1e-13
Identity = 43/63 (68.25%), Postives = 49/63 (77.78%), Query Frame = 0

Query: 1   MNATYCPTSSVVMTVDSIQYNIQTTGQSYHSLKFAQMRTYLENPVDLELLGSIMKWIGWS 60
           MNAT C T + VM+VD IQ N QT G SYHSLKFAQMRTYL++ +D EL GSIMKWIG S
Sbjct: 52  MNATCCQTLNDVMSVDYIQSNTQTIGLSYHSLKFAQMRTYLKDLIDQELPGSIMKWIGKS 111

Query: 61  PIN 64
            +N
Sbjct: 112 LVN 114

BLAST of PI0012396 vs. NCBI nr
Match: KAA0051993.1 (serine/threonine-protein phosphatase 7 long form-like protein isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 82.0 bits (201), Expect = 2.0e-12
Identity = 43/63 (68.25%), Postives = 48/63 (76.19%), Query Frame = 0

Query: 1  MNATYCPTSSVVMTVDSIQYNIQTTGQSYHSLKFAQMRTYLENPVDLELLGSIMKWIGWS 60
          MNAT C TS+ VM VDSIQ NIQ  G S HS KFAQM+TYL++PVD E  GSIMKWIG S
Sbjct: 17 MNATCCRTSNNVMPVDSIQSNIQIIGLSCHSPKFAQMQTYLKDPVDREQQGSIMKWIGKS 76

Query: 61 PIN 64
           +N
Sbjct: 77 LVN 79

BLAST of PI0012396 vs. NCBI nr
Match: KAA0042980.1 (serine/threonine-protein phosphatase 7 long form-like protein isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 80.1 bits (196), Expect = 7.6e-12
Identity = 42/63 (66.67%), Postives = 47/63 (74.60%), Query Frame = 0

Query: 1   MNATYCPTSSVVMTVDSIQYNIQTTGQSYHSLKFAQMRTYLENPVDLELLGSIMKWIGWS 60
           MNAT C TS+ VM VDSIQ N Q  G S HS KFAQM+TYL++PVD E  GSIMKWIG S
Sbjct: 342 MNATCCRTSNNVMPVDSIQSNTQIIGLSCHSPKFAQMQTYLKDPVDREQQGSIMKWIGKS 401

Query: 61  PIN 64
            +N
Sbjct: 402 LVN 404

BLAST of PI0012396 vs. NCBI nr
Match: KAA0031833.1 (serine/threonine-protein phosphatase 7 long form-like protein isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 80.1 bits (196), Expect = 7.6e-12
Identity = 42/63 (66.67%), Postives = 47/63 (74.60%), Query Frame = 0

Query: 1   MNATYCPTSSVVMTVDSIQYNIQTTGQSYHSLKFAQMRTYLENPVDLELLGSIMKWIGWS 60
           MNAT C TS+ VM VDSIQ N Q  G S HS KFAQM+TYL++PVD E  GSIMKWIG S
Sbjct: 105 MNATCCRTSNNVMPVDSIQSNTQIIGLSCHSPKFAQMQTYLKDPVDREQQGSIMKWIGKS 164

Query: 61  PIN 64
            +N
Sbjct: 165 LVN 167

BLAST of PI0012396 vs. NCBI nr
Match: KAA0026169.1 (uncharacterized protein E6C27_scaffold19G001250 [Cucumis melo var. makuwa])

HSP 1 Score: 77.4 bits (189), Expect = 5.0e-11
Identity = 40/63 (63.49%), Postives = 47/63 (74.60%), Query Frame = 0

Query: 1   MNATYCPTSSVVMTVDSIQYNIQTTGQSYHSLKFAQMRTYLENPVDLELLGSIMKWIGWS 60
           MNAT C TS+ VM VDSIQ N Q  G + HS KFAQM+TYL++PVD E  GSIM+WIG S
Sbjct: 501 MNATCCRTSNNVMPVDSIQSNTQIIGLNCHSPKFAQMQTYLKDPVDREQQGSIMEWIGKS 560

Query: 61  PIN 64
            +N
Sbjct: 561 LVN 563

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0KPT22.3e-1470.31Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G582750 PE=4 SV=1[more]
A0A5A7T0Q12.0e-1368.25Serine/threonine-protein phosphatase 7 long form-like protein OS=Cucumis melo va... [more]
A0A5A7U7U09.7e-1368.25Serine/threonine-protein phosphatase 7 long form-like protein isoform X1 OS=Cucu... [more]
A0A5A7TI343.7e-1266.67Serine/threonine-protein phosphatase 7 long form-like protein isoform X1 OS=Cucu... [more]
A0A5A7SNK73.7e-1266.67Serine/threonine-protein phosphatase 7 long form-like protein isoform X1 OS=Cucu... [more]
Match NameE-valueIdentityDescription
KAA0035171.14.1e-1368.25serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var.... [more]
KAA0051993.12.0e-1268.25serine/threonine-protein phosphatase 7 long form-like protein isoform X1 [Cucumi... [more]
KAA0042980.17.6e-1266.67serine/threonine-protein phosphatase 7 long form-like protein isoform X1 [Cucumi... [more]
KAA0031833.17.6e-1266.67serine/threonine-protein phosphatase 7 long form-like protein isoform X1 [Cucumi... [more]
KAA0026169.15.0e-1163.49uncharacterized protein E6C27_scaffold19G001250 [Cucumis melo var. makuwa][more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
PI0012396.1PI0012396.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0048507 meristem development