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Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. ATGGCTGCCTCTTCTGAGAAACAAACAAATACGATCAAGAGGTATTTGACCTTGAAGCCTTCCCAATCGCACGAAGAAGTAGAAGCAAAAAGAAAGGAGATGGGAATGGCTGCGTTGAAGCAACTTCAGACCCAAGGTCTTTACGCGGACTTGGAGGATGAAGACATTGCAGACATGGTAGACCTTTTGGTCGCAAAGATTGAAGCCAGAAAAGAGAAGAAGGAAAAAGAAGAAGAAAGAAAGGCAAAAGAGGAGCGTCGCAAGATACACGACGAAGAGAATAGGCGAAGAGAAGAAGGTTTGAAAAGAAAGAAAAAAGAAGCTTTTTCGCCTATTGCGGACACTGAATTCGAGAGGGTGGCAAAGAAAGCCCTCAAGAAAAAGGAGAAAGTGGCCGAGGGATTAATGATAACTCGTATAAATACAAGTTATTATAGCTTTTTAGGCGAAGCAATGTAG mRNA sequence ATGGCTGCCTCTTCTGAGAAACAAACAAATACGATCAAGAGGTATTTGACCTTGAAGCCTTCCCAATCGCACGAAGAAGTAGAAGCAAAAAGAAAGGAGATGGGAATGGCTGCGTTGAAGCAACTTCAGACCCAAGGTCTTTACGCGGACTTGGAGGATGAAGACATTGCAGACATGGTAGACCTTTTGGTCGCAAAGATTGAAGCCAGAAAAGAGAAGAAGGAAAAAGAAGAAGAAAGAAAGGCAAAAGAGGAGCGTCGCAAGATACACGACGAAGAGAATAGGCGAAGAGAAGAAGGTTTGAAAAGAAAGAAAAAAGAAGCTTTTTCGCCTATTGCGGACACTGAATTCGAGAGGGTGGCAAAGAAAGCCCTCAAGAAAAAGGAGAAAGTGGCCGAGGGATTAATGATAACTCGTATAAATACAAGTTATTATAGCTTTTTAGGCGAAGCAATGTAG Coding sequence (CDS) ATGGCTGCCTCTTCTGAGAAACAAACAAATACGATCAAGAGGTATTTGACCTTGAAGCCTTCCCAATCGCACGAAGAAGTAGAAGCAAAAAGAAAGGAGATGGGAATGGCTGCGTTGAAGCAACTTCAGACCCAAGGTCTTTACGCGGACTTGGAGGATGAAGACATTGCAGACATGGTAGACCTTTTGGTCGCAAAGATTGAAGCCAGAAAAGAGAAGAAGGAAAAAGAAGAAGAAAGAAAGGCAAAAGAGGAGCGTCGCAAGATACACGACGAAGAGAATAGGCGAAGAGAAGAAGGTTTGAAAAGAAAGAAAAAAGAAGCTTTTTCGCCTATTGCGGACACTGAATTCGAGAGGGTGGCAAAGAAAGCCCTCAAGAAAAAGGAGAAAGTGGCCGAGGGATTAATGATAACTCGTATAAATACAAGTTATTATAGCTTTTTAGGCGAAGCAATGTAG Protein sequence MAASSEKQTNTIKRYLTLKPSQSHEEVEAKRKEMGMAALKQLQTQGLYADLEDEDIADMVDLLVAKIEARKEKKEKEEERKAKEERRKIHDEENRRREEGLKRKKKEAFSPIADTEFERVAKKALKKKEKVAEGLMITRINTSYYSFLGEAM
Homology
BLAST of PI0012215 vs. ExPASy TrEMBL
Match: A0A5D3BNL6 (Protein MNN4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1923G00100 PE=4 SV=1) HSP 1 Score: 62.8 bits (151), Expect = 1.5e-06 Identity = 55/115 (47.83%), Postives = 78/115 (67.83%), Query Frame = 0
Query: 42 LQTQGLY-ADLEDEDIADMVDLLVAKIEARKEKKEK--------EEERKAKE---ERRKI 101
+ QGL ++++ED+AD+++L + +AR++K+EK E+ERKAKE ERRK
Sbjct: 3 IDRQGLKDKNVDEEDVADVLELAKTRKKAREKKEEKERREKERREKERKAKEKEKERRKK 62
Query: 102 HDEENRRREEGLK---RKKKEAFSP-IADTEFERVAKKALKKKEKVAEGLMITRI 141
+EE RRR+E LK +K+K SP IA TEFERVA+KA KKKEKV GL+ ++
Sbjct: 63 RNEEERRRKEELKKQGKKEKVQSSPSIAPTEFERVARKAQKKKEKVVSGLLKMKV 117
BLAST of PI0012215 vs. NCBI nr
Match: TYK00332.1 (protein MNN4-like [Cucumis melo var. makuwa]) HSP 1 Score: 62.8 bits (151), Expect = 3.0e-06 Identity = 55/115 (47.83%), Postives = 78/115 (67.83%), Query Frame = 0
Query: 42 LQTQGLY-ADLEDEDIADMVDLLVAKIEARKEKKEK--------EEERKAKE---ERRKI 101
+ QGL ++++ED+AD+++L + +AR++K+EK E+ERKAKE ERRK
Sbjct: 3 IDRQGLKDKNVDEEDVADVLELAKTRKKAREKKEEKERREKERREKERKAKEKEKERRKK 62
Query: 102 HDEENRRREEGLK---RKKKEAFSP-IADTEFERVAKKALKKKEKVAEGLMITRI 141
+EE RRR+E LK +K+K SP IA TEFERVA+KA KKKEKV GL+ ++
Sbjct: 63 RNEEERRRKEELKKQGKKEKVQSSPSIAPTEFERVARKAQKKKEKVVSGLLKMKV 117
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A5D3BNL6 | 1.5e-06 | 47.83 | Protein MNN4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1923G0... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| TYK00332.1 | 3.0e-06 | 47.83 | protein MNN4-like [Cucumis melo var. makuwa] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
InterPro
Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| None | No IPR available | COILS | Coil | Coil | coord: 59..95 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 71..105 |
Relationships
The following mRNA feature(s) are a part of this gene:
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