PI0012020 (gene) Melon (PI 482460) v1

Overview


Name	PI0012020
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	PMD domain-containing protein
Location	chr07: 17338074 .. 17339216 (+)
RNA-Seq Expression	PI0012020
Synteny	PI0012020

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGGACGGCTACACCTTTAGCCTTGTTGTCCCCATTCTAGCCAATATTTATAGCGGACTACGCCAGATTCATGACTCTACTTCATCTCTTGGCTATTCAAGTGCATGTTTTCCCCTACATTATGTACATGAATGGCTTGCTCTTTACTTCAACACTCATTAGAAGGCCCCTACGAGTCTTAGAGGTCCACACATGGTTGAGTTTTCCGGTGAAGGTGGGGCTAAATACTATACTAATCATGAGGCTTGTACACATATTCACAAGAAAAATTATGTGTCATGGCACACGTGCCTTCAGACAAAGAATAAAGACAAACTCCTAAAAGATGATGGAAAGTTAATTGATTGGAATGCTTCATTTTTTATAAGCATTCGATCTTGCTTTCTATCCTCACGATGGGGATGCTTTATGGTTATTGAACCTTATAGTCCTTGTTGCTTTAGTCGGCAATTTGGGTTTTATCAAGACGTGCCCCATGATTTAGATCAAAATATTTCCAAAGTTGATTTCGCCAACGTACGATATTATTGGATGATCTGTGTTGGCGAAACACACTTTCCCAAGAGTATTTTCCTGCACATGCCTTTAACCCGCATACCCATGTTACCTCGCACTATAGAGACTGGTGACTTGCAAAACATGGAGATTACCTCCTAGAAGGAGTGCAACATTTGATAGAGCGCCCCACTCTTCCTCATGTCAAACCTAAATCCATTAAGAAAACCAAGAAAGATTTTGGAAATGGGAGCAAAAGGATATGCTCCCTGGAATTGAAGAACAACCCGTTGGGCAAATTAAAAGGGGTACAAAATGCTTGATAGATGATTCGACTCCTCCTGCACGATCTAAACTCCTTGACAAAGATAATGCTGACAAAATGAGTAAAGAGACCTACATATTAATAATCAGCAACACCTTTTTTAGCATACCGAAGAGAGTCAAAGCAGCAATGGTGATCATCATTGGAAGAGATCCAAGAAGTCCGCCAAACAATCGACCAATGATGAAGAGTCTCCTAATGATGTTCCTAACATCACACAGTTTTTGGACATCACTATGCCCATGATTTCTTTTTCATATTTTTTTTCCTTTTTTTTTACAGACGCACCCCTTGCTCTTACTCTCATTTTGTATTATTAA

mRNA sequence

ATGGCGGACGGCTACACCTTTAGCCTTGTTGTCCCCATTCTAGCCAATATTTATAGCGGACTACGCCAGATTCATGACTCTACTTCATCTCTTGGCTATTCAAGTGCATGTTTTCCCCTACATTATAAGGCCCCTACGAGTCTTAGAGGTCCACACATGGTTGAGTTTTCCGGTGAAGGTGGGGCTAAATACTATACTAATCATGAGGCTTGTACACATATTCACAAGAAAAATTATGTGTCATGGCACACGTGCCTTCAGACAAAGAATAAAGACAAACTCCTAAAAGATGATGGAAAGTTAATTGATTGGAATGCTTCATTTTTTATAAGCATTCGATCTTGCTTTCTATCCTCACGATGGGGATGCTTTATGGTTATTGAACCTTATAGTCCTTGTTGCTTTAGTCGGCAATTTGGGTTTTATCAAGACGTGCCCCATGATTTAGATCAAAATATTTCCAAAGTTGATTTCGCCAACGTACGATATTATTGGATGATCTATTACCTCCTAGAAGGAGTGCAACATTTGATAGAGCGCCCCACTCTTCCTCATGTCAAACCTAAATCCATTAAGAAAACCAAGAAAGATTTTGGAAATGGGAGCAAAAGGATATGCTCCCTGGAATTGAAGAACAACCCGTTGGGCAAATTAAAAGGGCATACCGAAGAGAGTCAAAGCAGCAATGGTGATCATCATTGGAAGAGATCCAAGAAGTCCGCCAAACAATCGACCAATGATGAAGAGTCTCCTAATGATGTTCCTAACATCACACAGTTTTTGGACATCACTATGCCCATGATTTCTTTTTCATATTTTTTTTCCTTTTTTTTTACAGACGCACCCCTTGCTCTTACTCTCATTTTGTATTATTAA

Coding sequence (CDS)

ATGGCGGACGGCTACACCTTTAGCCTTGTTGTCCCCATTCTAGCCAATATTTATAGCGGACTACGCCAGATTCATGACTCTACTTCATCTCTTGGCTATTCAAGTGCATGTTTTCCCCTACATTATAAGGCCCCTACGAGTCTTAGAGGTCCACACATGGTTGAGTTTTCCGGTGAAGGTGGGGCTAAATACTATACTAATCATGAGGCTTGTACACATATTCACAAGAAAAATTATGTGTCATGGCACACGTGCCTTCAGACAAAGAATAAAGACAAACTCCTAAAAGATGATGGAAAGTTAATTGATTGGAATGCTTCATTTTTTATAAGCATTCGATCTTGCTTTCTATCCTCACGATGGGGATGCTTTATGGTTATTGAACCTTATAGTCCTTGTTGCTTTAGTCGGCAATTTGGGTTTTATCAAGACGTGCCCCATGATTTAGATCAAAATATTTCCAAAGTTGATTTCGCCAACGTACGATATTATTGGATGATCTATTACCTCCTAGAAGGAGTGCAACATTTGATAGAGCGCCCCACTCTTCCTCATGTCAAACCTAAATCCATTAAGAAAACCAAGAAAGATTTTGGAAATGGGAGCAAAAGGATATGCTCCCTGGAATTGAAGAACAACCCGTTGGGCAAATTAAAAGGGCATACCGAAGAGAGTCAAAGCAGCAATGGTGATCATCATTGGAAGAGATCCAAGAAGTCCGCCAAACAATCGACCAATGATGAAGAGTCTCCTAATGATGTTCCTAACATCACACAGTTTTTGGACATCACTATGCCCATGATTTCTTTTTCATATTTTTTTTCCTTTTTTTTTACAGACGCACCCCTTGCTCTTACTCTCATTTTGTATTATTAA

Protein sequence

MADGYTFSLVVPILANIYSGLRQIHDSTSSLGYSSACFPLHYKAPTSLRGPHMVEFSGEGGAKYYTNHEACTHIHKKNYVSWHTCLQTKNKDKLLKDDGKLIDWNASFFISIRSCFLSSRWGCFMVIEPYSPCCFSRQFGFYQDVPHDLDQNISKVDFANVRYYWMIYYLLEGVQHLIERPTLPHVKPKSIKKTKKDFGNGSKRICSLELKNNPLGKLKGHTEESQSSNGDHHWKRSKKSAKQSTNDEESPNDVPNITQFLDITMPMISFSYFFSFFFTDAPLALTLILYY

Homology

[Close]

BLAST of PI0012020 vs. ExPASy TrEMBL
Match: A0A5A7V0Y4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold39G00570 PE=4 SV=1)

HSP 1 Score: 302.0 bits (772), Expect = 2.7e-78
Identity = 165/308 (53.57%), Postives = 197/308 (63.96%), Query Frame = 0


Query: 1   MADGYTFSLVVPILANIYSGLRQIHDSTSSLGYSSACFPLH-------------YKAPTS 60
           MA+G TFSL +PILANIYSGLRQIHD TSSLG+S+ACFP+H             YKAPTS
Sbjct: 88  MAEGDTFSLAIPILANIYSGLRQIHDCTSSLGHSNACFPIHYVHGWLALYFNTYYKAPTS 147

Query: 61  LRGPHMVEFSGEGGAKYYTNHEACTHIHKKNYVSWHTCLQTKNKDKLLKDDGKLIDWNAS 120
           LRGP MVEFSGEGGAKYYTN EA THIH + YVSWH CLQ KNKD+LL DDG LI WNAS
Sbjct: 148 LRGPRMVEFSGEGGAKYYTNLEARTHIHMEKYVSWHACLQAKNKDELLTDDGTLIHWNAS 207

Query: 121 FFISIRSCFLSSRWGCFMVIEPYSPCCFSRQFGFYQDVPHDLDQNISKVDFANVRYYWMI 180
           FFISIR CFL S++G   VIEPYSPC F RQFGFYQDVP+DL + I K + AN   +W+ 
Sbjct: 208 FFISIRFCFLFSQYGSSTVIEPYSPCRFGRQFGFYQDVPYDLGKKIPKANLANT--WWLA 267

Query: 181 Y---YLLEGVQHLIERPTLPHVKPKSIKKTKKDFGNGSKRICSLELKNNPLGKLK----- 240
               YL +G+Q+LI+R T   +K K+ KK + +  +G+K+ICS +L+  P+ K K     
Sbjct: 268 KHGDYLQDGLQNLIDRLTPLLIKSKTTKKIEHNPDSGNKKICSSKLEEQPVEKAKKGTKC 327

Query: 241 ------------------------------------GHTEESQSSNGDHHWKRSKKSAKQ 252
                                                HTE+S SSN DHHWKR K+  KQ
Sbjct: 328 LVATSTPSAQFKFAARSVANNVRKDLLILTTGKRPSTHTEDSHSSNDDHHWKRPKRPDKQ 387

[Close]

BLAST of PI0012020 vs. ExPASy TrEMBL
Match: A0A5D3D3U4 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold306G003480 PE=4 SV=1)

HSP 1 Score: 295.8 bits (756), Expect = 2.0e-76
Identity = 164/303 (54.13%), Postives = 193/303 (63.70%), Query Frame = 0


Query: 1   MADGYTFSLVVPILANIYSGLRQIHDSTSSLGYSSACFPL-------------HYKAPTS 60
           MA+GYTFSLVVPILANIYSGLRQIHDSTSSLG+S+ACFPL             HYKAPTS
Sbjct: 126 MAEGYTFSLVVPILANIYSGLRQIHDSTSSLGHSNACFPLHYVHGWLTLYFNTHYKAPTS 185

Query: 61  LRGPHMVEFSGEGGAKYYTNHEACTHIHKKNYVSWHTCLQTKNKDKLLKDDGKLIDWNAS 120
           LRG  M+EF GEGGA YYTN  AC HI+K  YVSWH CLQTKNKD+LLKDDG LI WNAS
Sbjct: 186 LRGSRMIEFFGEGGANYYTNLVACPHIYKGKYVSWHVCLQTKNKDELLKDDGNLIYWNAS 245

Query: 121 FFISIRSCFLSSRWGCFMVIEPYSPCCFSRQFGFYQDVPHDLDQNISKVDFANVRYYWMI 180
           FF+SIRSCFLSS+ G  MVIE YSP CFSR+  FYQDVP+DL++ + + DFA  R    +
Sbjct: 246 FFMSIRSCFLSSQCGSSMVIESYSPFCFSRKLRFYQDVPYDLNEKLFEADFATTRKSATV 305

Query: 181 YYLLEGVQHLIERPTLPHVKPKSIKKTKKDFGNGSKRICSLELKNNPLGKLK-------- 240
               +G       PT P+VK K+ KKT+ +F +G K+I S+E++  P+GK +        
Sbjct: 306 ----DG------SPTPPYVKSKTTKKTENNFRSGRKKIGSIEVEERPIGKTEEGTQCMVD 365

Query: 241 ---------------------------------GHTEESQSSNGDHHWKRSKKSAKQSTN 250
                                             HTEESQS+NGD HWKR K   KQS +
Sbjct: 366 DSTPSAQFKLYDRDGTDNMGKDIRILITDKHPSEHTEESQSNNGDCHWKRCKWPDKQSID 418

[Close]

BLAST of PI0012020 vs. ExPASy TrEMBL
Match: A0A5A7TJC9 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold67G005550 PE=4 SV=1)

HSP 1 Score: 295.8 bits (756), Expect = 2.0e-76
Identity = 164/303 (54.13%), Postives = 193/303 (63.70%), Query Frame = 0


Query: 1   MADGYTFSLVVPILANIYSGLRQIHDSTSSLGYSSACFPL-------------HYKAPTS 60
           MA+GYTFSLVVPILANIYSGLRQIHDSTSSLG+S+ACFPL             HYKAPTS
Sbjct: 126 MAEGYTFSLVVPILANIYSGLRQIHDSTSSLGHSNACFPLHYVHGWLTLYFNTHYKAPTS 185

Query: 61  LRGPHMVEFSGEGGAKYYTNHEACTHIHKKNYVSWHTCLQTKNKDKLLKDDGKLIDWNAS 120
           LRG  M+EF GEGGA YYTN  AC HI+K  YVSWH CLQTKNKD+LLKDDG LI WNAS
Sbjct: 186 LRGSRMIEFFGEGGANYYTNLVACPHIYKGKYVSWHVCLQTKNKDELLKDDGNLIYWNAS 245

Query: 121 FFISIRSCFLSSRWGCFMVIEPYSPCCFSRQFGFYQDVPHDLDQNISKVDFANVRYYWMI 180
           FF+SIRSCFLSS+ G  MVIE YSP CFSR+  FYQDVP+DL++ + + DFA  R    +
Sbjct: 246 FFMSIRSCFLSSQCGSSMVIESYSPFCFSRKLRFYQDVPYDLNEKLFEADFATTRKSATV 305

Query: 181 YYLLEGVQHLIERPTLPHVKPKSIKKTKKDFGNGSKRICSLELKNNPLGKLK-------- 240
               +G       PT P+VK K+ KKT+ +F +G K+I S+E++  P+GK +        
Sbjct: 306 ----DG------SPTPPYVKSKTTKKTENNFRSGRKKIGSIEVEERPIGKTEEGTQCMVD 365

Query: 241 ---------------------------------GHTEESQSSNGDHHWKRSKKSAKQSTN 250
                                             HTEESQS+NGD HWKR K   KQS +
Sbjct: 366 DSTPSAQFKLYDRDGTDNMGKDIRILITDKHPSEHTEESQSNNGDCHWKRCKWPDKQSID 418

[Close]

BLAST of PI0012020 vs. ExPASy TrEMBL
Match: A0A5D3C9B7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold654G00670 PE=4 SV=1)

HSP 1 Score: 290.0 bits (741), Expect = 1.1e-74
Identity = 165/317 (52.05%), Postives = 191/317 (60.25%), Query Frame = 0


Query: 1   MADGYTFSLVVPILANIYSGLRQIHDSTSSLGYSSACFPLH-------------YKAPTS 60
           MA+G TFSL +P+LANIYSGLRQIHD TSSLG+S+ACFP+H             YKAPTS
Sbjct: 171 MAEGDTFSLAIPVLANIYSGLRQIHDCTSSLGHSNACFPIHYVHGWLALYFNTYYKAPTS 230

Query: 61  LRGPHMVEFSGEGGAKYYTNHEACTHIHKKNYVSWHTCLQTKNKDKLLKDDGKLIDWNAS 120
           LRGP MVEFSGEGGAKYYTN EA THIHK+ YVSWH CLQ KNKD+LL DDG LI WNAS
Sbjct: 231 LRGPRMVEFSGEGGAKYYTNLEARTHIHKEKYVSWHACLQAKNKDELLTDDGTLIHWNAS 290

Query: 121 FFISIRSCFLSSRWGCFMVIEPYSPCCFSRQFGFYQDVPHDLDQNISKVDFANVRYYWMI 180
           FFISIR CFL S++G   VIEPYSPC F RQFGFYQDVP+DL + I K + ANVRY+WMI
Sbjct: 291 FFISIRFCFLFSQYGSSTVIEPYSPCRFGRQFGFYQDVPYDLGKKIPKANLANVRYHWMI 350

Query: 181 ---------YYLLEGVQHLIERPTLPHVKPKSIKKTKKDFGNGSKRICSLELKNNPLGKL 240
                     YL     H     TL H K   + K  +      K+ICS +L+  P+ K 
Sbjct: 351 CVRESTLSQVYLPAPTFHPCNHLTL-HYKTWWLAKHAE-----IKKICSSKLEEQPVEKA 410

Query: 241 K-----------------------------------------GHTEESQSSNGDHHWKRS 255
           K                                          HTE++ SSN DHHWKR 
Sbjct: 411 KKGTKCLVATSTPSAQFKFAARSVANNVRKDLLILTTGKRPSTHTEDNHSSNDDHHWKRP 470

[Close]

BLAST of PI0012020 vs. ExPASy TrEMBL
Match: A0A5A7U4C3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold726G00240 PE=4 SV=1)

HSP 1 Score: 194.1 bits (492), Expect = 8.0e-46
Identity = 131/330 (39.70%), Postives = 157/330 (47.58%), Query Frame = 0


Query: 1   MADGYTFSLVVPILANIYSGLRQIHDSTSSLGYSSACFPL-------------HYKAPTS 60
           MA+GYTFSL +P+LANIYSGL QIHDSTSSLG+S+ CFP+             HYKA TS
Sbjct: 237 MAEGYTFSLAIPVLANIYSGLHQIHDSTSSLGHSNVCFPIHYVHGWLALYFNTHYKASTS 296

Query: 61  LRGPHMVEFSGEGGAKYYTNHEACTHIHKKNYVSWHTCLQTKNKDKLLKDDGKLIDWNAS 120
           LRGP MVEFSGEGGAKYYTN EA  HIHK N                             
Sbjct: 297 LRGPCMVEFSGEGGAKYYTNLEARMHIHKGN----------------------------- 356

Query: 121 FFISIRSCFLSSRWGCFMVIEPYSPCCFSRQFGFYQDVPHDLDQNISKVDFANVRYYWMI 180
                                   PC F RQFGFYQDVP+DL + I K + ANVRY+WMI
Sbjct: 357 ------------------------PCRFGRQFGFYQDVPYDLSEKIPKANLANVRYHWMI 416

Query: 181 Y------------------------------------YLLEGVQHLIERPTLPHVKPKSI 240
                                                YL EG+Q+LI+RPT   +K K+ 
Sbjct: 417 CVRESTLSQVYLPAPTLHPCNHITSHYKAWWLAKHGDYLQEGLQNLIDRPTPSLIKSKTT 476

Query: 241 KKTKKDFGNGSKRICSLELK------------------NNPLGKL------KGHTEESQS 258
           KK +    N  K+IC  + K                  +  L KL        HTE+S S
Sbjct: 477 KKIEH---NPDKKICFSKTKEPVDAQFKFAARSGADNMHKDLLKLTTDKRPSTHTEDSHS 510

[Close]

BLAST of PI0012020 vs. NCBI nr
Match: XP_031745312.1 (uncharacterized protein LOC116405439 [Cucumis sativus])

HSP 1 Score: 348.2 bits (892), Expect = 6.8e-92
Identity = 194/367 (52.86%), Postives = 222/367 (60.49%), Query Frame = 0


Query: 1   MADGYTFSLVVPILANIYSGLRQIHDSTSSLGYSSACFPL-------------HYKAPTS 60
           MA+GYTFSL VP+LANIYSGLRQ+HDSTSSLGYS+ACFPL             HYKAP S
Sbjct: 340 MAEGYTFSLAVPVLANIYSGLRQVHDSTSSLGYSNACFPLHYVHGWLALYFNTHYKAPRS 399

Query: 61  LRGPHMVEFSGEGGAKYYTNHEACTHIHKKNYVSWHTCLQTKNKDKLLKDDGKLIDWNAS 120
           LRGP MVEFSGEGGAKYYTN EA THIHK  YVSWH CL TKNKD+LL DDG+LI WNAS
Sbjct: 400 LRGPRMVEFSGEGGAKYYTNLEARTHIHKGKYVSWHACLPTKNKDELLTDDGELISWNAS 459

Query: 121 FFISIRSCFLSSRWGCFMVIEPYSPCCFSRQFGFYQDVPHDLDQNISKVDFANVRYYWMI 180
           FFISIRSCFLSS+ G   VIEPYSPC FSRQFGFYQDVP+DL + I + +F NVRY WMI
Sbjct: 460 FFISIRSCFLSSQCGSSTVIEPYSPCRFSRQFGFYQDVPYDLGEEIPEANFFNVRYCWMI 519

Query: 181 Y------------------------------------YLLEGVQHLIERPTLPHVKPKSI 240
                                                YL EGVQHLI+RPT PH+K K+ 
Sbjct: 520 CIRENTLSQVYLPVSAPNPDTHVTSHYKVWWLAKHGDYLQEGVQHLIDRPTPPHIKSKTT 579

Query: 241 KKTKKDFGNGSKRICSLELKNNPLGKLKGHT----------------------------- 278
           KK + +FG+G+++ICS E     + K++G T                             
Sbjct: 580 KKIEHNFGSGNQKICSDETDERLVEKIEGGTKRLVDNLSLSTRFKHLIKGGIDNVGKDNR 639

[Close]

BLAST of PI0012020 vs. NCBI nr
Match: KAA0060136.1 (uncharacterized protein E6C27_scaffold39G00570 [Cucumis melo var. makuwa])

HSP 1 Score: 302.0 bits (772), Expect = 5.6e-78
Identity = 165/308 (53.57%), Postives = 197/308 (63.96%), Query Frame = 0


Query: 1   MADGYTFSLVVPILANIYSGLRQIHDSTSSLGYSSACFPLH-------------YKAPTS 60
           MA+G TFSL +PILANIYSGLRQIHD TSSLG+S+ACFP+H             YKAPTS
Sbjct: 88  MAEGDTFSLAIPILANIYSGLRQIHDCTSSLGHSNACFPIHYVHGWLALYFNTYYKAPTS 147

Query: 61  LRGPHMVEFSGEGGAKYYTNHEACTHIHKKNYVSWHTCLQTKNKDKLLKDDGKLIDWNAS 120
           LRGP MVEFSGEGGAKYYTN EA THIH + YVSWH CLQ KNKD+LL DDG LI WNAS
Sbjct: 148 LRGPRMVEFSGEGGAKYYTNLEARTHIHMEKYVSWHACLQAKNKDELLTDDGTLIHWNAS 207

Query: 121 FFISIRSCFLSSRWGCFMVIEPYSPCCFSRQFGFYQDVPHDLDQNISKVDFANVRYYWMI 180
           FFISIR CFL S++G   VIEPYSPC F RQFGFYQDVP+DL + I K + AN   +W+ 
Sbjct: 208 FFISIRFCFLFSQYGSSTVIEPYSPCRFGRQFGFYQDVPYDLGKKIPKANLANT--WWLA 267

Query: 181 Y---YLLEGVQHLIERPTLPHVKPKSIKKTKKDFGNGSKRICSLELKNNPLGKLK----- 240
               YL +G+Q+LI+R T   +K K+ KK + +  +G+K+ICS +L+  P+ K K     
Sbjct: 268 KHGDYLQDGLQNLIDRLTPLLIKSKTTKKIEHNPDSGNKKICSSKLEEQPVEKAKKGTKC 327

Query: 241 ------------------------------------GHTEESQSSNGDHHWKRSKKSAKQ 252
                                                HTE+S SSN DHHWKR K+  KQ
Sbjct: 328 LVATSTPSAQFKFAARSVANNVRKDLLILTTGKRPSTHTEDSHSSNDDHHWKRPKRPDKQ 387

[Close]

BLAST of PI0012020 vs. NCBI nr
Match: KAA0042086.1 (reverse transcriptase [Cucumis melo var. makuwa])

HSP 1 Score: 295.8 bits (756), Expect = 4.0e-76
Identity = 164/303 (54.13%), Postives = 193/303 (63.70%), Query Frame = 0


Query: 1   MADGYTFSLVVPILANIYSGLRQIHDSTSSLGYSSACFPL-------------HYKAPTS 60
           MA+GYTFSLVVPILANIYSGLRQIHDSTSSLG+S+ACFPL             HYKAPTS
Sbjct: 126 MAEGYTFSLVVPILANIYSGLRQIHDSTSSLGHSNACFPLHYVHGWLTLYFNTHYKAPTS 185

Query: 61  LRGPHMVEFSGEGGAKYYTNHEACTHIHKKNYVSWHTCLQTKNKDKLLKDDGKLIDWNAS 120
           LRG  M+EF GEGGA YYTN  AC HI+K  YVSWH CLQTKNKD+LLKDDG LI WNAS
Sbjct: 186 LRGSRMIEFFGEGGANYYTNLVACPHIYKGKYVSWHVCLQTKNKDELLKDDGNLIYWNAS 245

Query: 121 FFISIRSCFLSSRWGCFMVIEPYSPCCFSRQFGFYQDVPHDLDQNISKVDFANVRYYWMI 180
           FF+SIRSCFLSS+ G  MVIE YSP CFSR+  FYQDVP+DL++ + + DFA  R    +
Sbjct: 246 FFMSIRSCFLSSQCGSSMVIESYSPFCFSRKLRFYQDVPYDLNEKLFEADFATTRKSATV 305

Query: 181 YYLLEGVQHLIERPTLPHVKPKSIKKTKKDFGNGSKRICSLELKNNPLGKLK-------- 240
               +G       PT P+VK K+ KKT+ +F +G K+I S+E++  P+GK +        
Sbjct: 306 ----DG------SPTPPYVKSKTTKKTENNFRSGRKKIGSIEVEERPIGKTEEGTQCMVD 365

Query: 241 ---------------------------------GHTEESQSSNGDHHWKRSKKSAKQSTN 250
                                             HTEESQS+NGD HWKR K   KQS +
Sbjct: 366 DSTPSAQFKLYDRDGTDNMGKDIRILITDKHPSEHTEESQSNNGDCHWKRCKWPDKQSID 418

[Close]

BLAST of PI0012020 vs. NCBI nr
Match: TYK18029.1 (reverse transcriptase [Cucumis melo var. makuwa])

HSP 1 Score: 295.8 bits (756), Expect = 4.0e-76
Identity = 164/303 (54.13%), Postives = 193/303 (63.70%), Query Frame = 0


Query: 1   MADGYTFSLVVPILANIYSGLRQIHDSTSSLGYSSACFPL-------------HYKAPTS 60
           MA+GYTFSLVVPILANIYSGLRQIHDSTSSLG+S+ACFPL             HYKAPTS
Sbjct: 126 MAEGYTFSLVVPILANIYSGLRQIHDSTSSLGHSNACFPLHYVHGWLTLYFNTHYKAPTS 185

Query: 61  LRGPHMVEFSGEGGAKYYTNHEACTHIHKKNYVSWHTCLQTKNKDKLLKDDGKLIDWNAS 120
           LRG  M+EF GEGGA YYTN  AC HI+K  YVSWH CLQTKNKD+LLKDDG LI WNAS
Sbjct: 186 LRGSRMIEFFGEGGANYYTNLVACPHIYKGKYVSWHVCLQTKNKDELLKDDGNLIYWNAS 245

Query: 121 FFISIRSCFLSSRWGCFMVIEPYSPCCFSRQFGFYQDVPHDLDQNISKVDFANVRYYWMI 180
           FF+SIRSCFLSS+ G  MVIE YSP CFSR+  FYQDVP+DL++ + + DFA  R    +
Sbjct: 246 FFMSIRSCFLSSQCGSSMVIESYSPFCFSRKLRFYQDVPYDLNEKLFEADFATTRKSATV 305

Query: 181 YYLLEGVQHLIERPTLPHVKPKSIKKTKKDFGNGSKRICSLELKNNPLGKLK-------- 240
               +G       PT P+VK K+ KKT+ +F +G K+I S+E++  P+GK +        
Sbjct: 306 ----DG------SPTPPYVKSKTTKKTENNFRSGRKKIGSIEVEERPIGKTEEGTQCMVD 365

Query: 241 ---------------------------------GHTEESQSSNGDHHWKRSKKSAKQSTN 250
                                             HTEESQS+NGD HWKR K   KQS +
Sbjct: 366 DSTPSAQFKLYDRDGTDNMGKDIRILITDKHPSEHTEESQSNNGDCHWKRCKWPDKQSID 418

[Close]

BLAST of PI0012020 vs. NCBI nr
Match: TYK08451.1 (uncharacterized protein E5676_scaffold654G00670 [Cucumis melo var. makuwa])

HSP 1 Score: 290.0 bits (741), Expect = 2.2e-74
Identity = 165/317 (52.05%), Postives = 191/317 (60.25%), Query Frame = 0


Query: 1   MADGYTFSLVVPILANIYSGLRQIHDSTSSLGYSSACFPLH-------------YKAPTS 60
           MA+G TFSL +P+LANIYSGLRQIHD TSSLG+S+ACFP+H             YKAPTS
Sbjct: 171 MAEGDTFSLAIPVLANIYSGLRQIHDCTSSLGHSNACFPIHYVHGWLALYFNTYYKAPTS 230

Query: 61  LRGPHMVEFSGEGGAKYYTNHEACTHIHKKNYVSWHTCLQTKNKDKLLKDDGKLIDWNAS 120
           LRGP MVEFSGEGGAKYYTN EA THIHK+ YVSWH CLQ KNKD+LL DDG LI WNAS
Sbjct: 231 LRGPRMVEFSGEGGAKYYTNLEARTHIHKEKYVSWHACLQAKNKDELLTDDGTLIHWNAS 290

Query: 121 FFISIRSCFLSSRWGCFMVIEPYSPCCFSRQFGFYQDVPHDLDQNISKVDFANVRYYWMI 180
           FFISIR CFL S++G   VIEPYSPC F RQFGFYQDVP+DL + I K + ANVRY+WMI
Sbjct: 291 FFISIRFCFLFSQYGSSTVIEPYSPCRFGRQFGFYQDVPYDLGKKIPKANLANVRYHWMI 350

Query: 181 ---------YYLLEGVQHLIERPTLPHVKPKSIKKTKKDFGNGSKRICSLELKNNPLGKL 240
                     YL     H     TL H K   + K  +      K+ICS +L+  P+ K 
Sbjct: 351 CVRESTLSQVYLPAPTFHPCNHLTL-HYKTWWLAKHAE-----IKKICSSKLEEQPVEKA 410

Query: 241 K-----------------------------------------GHTEESQSSNGDHHWKRS 255
           K                                          HTE++ SSN DHHWKR 
Sbjct: 411 KKGTKCLVATSTPSAQFKFAARSVANNVRKDLLILTTGKRPSTHTEDNHSSNDDHHWKRP 470

The following BLAST results are available for this feature:

BLAST of PI0012020 vs.


Match Name	E-value	Identity	Description

BLAST of PI0012020 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7V0Y4	2.7e-78	53.57	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5D3D3U4	2.0e-76	54.13	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold30...	[more]
A0A5A7TJC9	2.0e-76	54.13	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold67...	[more]
A0A5D3C9B7	1.1e-74	52.05	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5A7U4C3	8.0e-46	39.70	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]

BLAST of PI0012020 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_031745312.1	6.8e-92	52.86	uncharacterized protein LOC116405439 [Cucumis sativus]	[more]
KAA0060136.1	5.6e-78	53.57	uncharacterized protein E6C27_scaffold39G00570 [Cucumis melo var. makuwa]	[more]
KAA0042086.1	4.0e-76	54.13	reverse transcriptase [Cucumis melo var. makuwa]	[more]
TYK18029.1	4.0e-76	54.13	reverse transcriptase [Cucumis melo var. makuwa]	[more]
TYK08451.1	2.2e-74	52.05	uncharacterized protein E5676_scaffold654G00670 [Cucumis melo var. makuwa]	[more]

BLAST of PI0012020 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 216..253
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 224..246
None	No IPR available	PANTHER	PTHR36607	1,2-DIHYDROXY-3-KETO-5-METHYLTHIOPENTENE DIOXYGENASE 4	coord: 1..216

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0012020.1	PI0012020.1	mRNA