PI0011847 (gene) Melon (PI 482460) v1

Overview
NamePI0011847
Typegene
OrganismCucumis metuliferus (Melon (PI 482460) v1)
DescriptionUnknown protein
Locationchr10: 20642470 .. 20643151 (+)
RNA-Seq ExpressionPI0011847
SyntenyPI0011847
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACTCTGATTGTGGACCAATCTTTTGATGATGATGATAATAAAGGAAAGAACCAGGCTTCAGTTCAGATTCACAAACTTCCCTTCTGTTCTTTTTCTAAGTCAGAGTCTCAGCTGCATTTTCCCGTGTAAGATTCTTTCCCTTCATGGCTGGAAAACAGTGGTCAGAACCCACTCTTTTTTCTTGTTCATCTTCCTCAATTTCTTACTTTTTCTTGTTAATTGATTTGATTCTTCAATTGGGTCGATGCTGGTTTCTGTTATTTCAATGTTTTTAGCTTAGTTTTTTGTGTTTGAATTCTAGGTTTAATTGATGAACTTGTGAAATGTCTTCTATACTGCTTGTTTGAGTTGAATCTTCACTTGGGTTTCGTTTTGTTTCTGATTTTTTTTTAATGATTTGTTGGTAGATAAAGTTTGTTGCATGCTCTTTTTCTTGGATGTTGTGTGGTGCTTATGTTTTGATTTGAAGTTTTGCTCGTGGAAGGACTGATTAGTTTAAGAGTTCATAAGCAATAAATTGGCTTAAATTGGTTTTAAATTGCAACGTAAATTGAGTTCTGGATCTTGGAAAGTAATGGCAGAATACTTTTCAATGGAACCCAGCAGCTTCTCCCCCATTAAGGCGAATCGGCTCAGAAGAAAACAGGTGGAGTTTCGATTTAGACTCACTTTGAACTGA

mRNA sequence

ATGACTCTGATTGTGGACCAATCTTTTGATGATGATGATAATAAAGGAAAGAACCAGGCTTCAGTTCAGATTCACAAACTTCCCTTCTGTTCTTTTTCTAAGTCAGAGTCTCAGCTGCATTTTCCCGTCAGCTTCTCCCCCATTAAGGCGAATCGGCTCAGAAGAAAACAGGTGGAGTTTCGATTTAGACTCACTTTGAACTGA

Coding sequence (CDS)

ATGACTCTGATTGTGGACCAATCTTTTGATGATGATGATAATAAAGGAAAGAACCAGGCTTCAGTTCAGATTCACAAACTTCCCTTCTGTTCTTTTTCTAAGTCAGAGTCTCAGCTGCATTTTCCCGTCAGCTTCTCCCCCATTAAGGCGAATCGGCTCAGAAGAAAACAGGTGGAGTTTCGATTTAGACTCACTTTGAACTGA

Protein sequence

MTLIVDQSFDDDDNKGKNQASVQIHKLPFCSFSKSESQLHFPVSFSPIKANRLRRKQVEFRFRLTLN
Homology
[Close]
BLAST of PI0011847 vs. ExPASy TrEMBL
Match: A0A0A0KUK8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G610510 PE=4 SV=1)

HSP 1 Score: 129.8 bits (325), Expect = 4.3e-27
Identity = 64/67 (95.52%), Postives = 65/67 (97.01%), Query Frame = 0 

Query: 1  MTLIVDQSFDDDDNKGKNQASVQIHKLPFCSFSKSESQLHFPVSFSPIKANRLRRKQVEF 60
          MTLIVDQSFDDDDNKGKNQASVQIHKLPFCSFSKSESQLHFPVSFSPIKANRLRRK V F
Sbjct: 1  MTLIVDQSFDDDDNKGKNQASVQIHKLPFCSFSKSESQLHFPVSFSPIKANRLRRKLVAF 60

Query: 61 RFRLTLN 68
          RFRL+LN
Sbjct: 61 RFRLSLN 67

[Close]
BLAST of PI0011847 vs. NCBI nr
Match: KGN52117.1 (hypothetical protein Csa_008869 [Cucumis sativus])

HSP 1 Score: 129.8 bits (325), Expect = 8.8e-27
Identity = 64/67 (95.52%), Postives = 65/67 (97.01%), Query Frame = 0 

Query: 1  MTLIVDQSFDDDDNKGKNQASVQIHKLPFCSFSKSESQLHFPVSFSPIKANRLRRKQVEF 60
          MTLIVDQSFDDDDNKGKNQASVQIHKLPFCSFSKSESQLHFPVSFSPIKANRLRRK V F
Sbjct: 1  MTLIVDQSFDDDDNKGKNQASVQIHKLPFCSFSKSESQLHFPVSFSPIKANRLRRKLVAF 60

Query: 61 RFRLTLN 68
          RFRL+LN
Sbjct: 61 RFRLSLN 67

The following BLAST results are available for this feature:
BLAST of PI0011847 vs.
Match NameE-valueIdentityDescription
BLAST of PI0011847 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KUK84.3e-2795.52Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G610510 PE=4 SV=1[more]
BLAST of PI0011847 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN52117.18.8e-2795.52hypothetical protein Csa_008869 [Cucumis sativus][more]
BLAST of PI0011847 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
PI0011847.1PI0011847.1mRNA