PI0011827 (gene) Melon (PI 482460) v1

Overview


Name	PI0011827
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	16S rRNA (uracil(1498)-N(3))-methyltransferase
Location	chr01: 1113374 .. 1117718 (-)
RNA-Seq Expression	PI0011827
Synteny	PI0011827

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTCCATAGTTGTTGTTCTTCCCAAATGCGAACTATAGGAGCATTTCGACCTCAATTGACACAGTTATTGAACCCCTCATGTTTCAGAAGCTTCAAAGTTAGAGCTCTATCCTCTTCATCTCTGCCCTCCTCGAATCAATCTCGCGGTGGCCTTCCTCGCTTCTTCTCCCAAGTTCTACCTTCTTATAAGGCAATCCCTCTTTTTTTTTCTTTTTTTTTTTTTCAATTATTAAGTTTTTATATGATTGAAAATTGTGTATGAGTTGGGGTTGTGTTAGTTTTGGATGGGGTCTGTCGATTTGAATGGAATATTACTAATTTTTTCCTTTTTGGATTAAGTGTATGAGTGTTGGTGACTCTGAATTTTGGAAGACAAAGAATGTTGTCATTATGAGTGGGGTTTGATTTGATCCATTAAATGTTAATTATGGAGCTTTGTGTTCTTGGGAAAACTTGGAATGCTTTCGATATATTTTTGTGGGGAGTTGGTATCTATGAACTGAACCTATGAGATGGATAATGGCATTTACTATGATGAAATGGGATAGATGATTATTTTCCTAGTGGCATCTCTATTGGTCTCTTCAAGTAAGTCTTAAGAATTTTCCATATAATGATAGGAGAGGGAAGTTTAACTACATTGTGTAATGTCATGCTGTAGTAAGCTTAATGCTTTACTTGATTTGATAGTTTTGTAAAGTTAGATTGTGGAAATGGAACTGCTCTCATATCACATGCTTCATCATTATCCAGGGTGATGTTATTCGTCTAGAAGGCGGTGAAGTCTGGCATATGACTAAAGTATTGAGGTTGAAGACTGATGATAGGTACTACTTCTAATAGTCAGTAAAATCGTTTACTGTTATCTAGACATATGGGTTACTGGCTGGATTCTTTGCTCTATTTATCTGTTCGTTATCTTCATAATAATTGGATGTAAATTCAAGGGTGGAGCTGTTCAATGGAAATGGAGGTTTAGTTGAAGGGAGCATAAAGAACATTCGTGTCAACGGACTTGACATTCTGGCTATGGAAGAACCAAAATCTGTTTTACCTCAAAGCACACAATGGCATGTATTTGCAGCTTGCGGTAAGATTCTTATGAGGAATCATTACACTTTTACTGCATCTTATATTCTTATGGCATGGAAATTAACATGCCTCTGTTTAGGTACTCTAAAGGGTGGTCGTGCTGATTGGCTTGTTGAAAAATGTACGGTAAGTAAATATAGACTAAGGTGATGCAAATGAGAATTTTTGCTTCCTAATTTTCTTGCTGCCTTTTCACTTTATTTAGGAACTGGGTGCCAGCAGTGTAACTCCTCTGCTAACAGAACGTTGCCCTACCATATCTGATAACCGGGTACACAGATTTGAACGTATCACATTGGCAGCAACTAAACAATGTGAGTCATTATTCAAGTTAAGTTTCTTTGCCTTTGGAGTGGGAACTTGAGACATTTCAATCTGGTTTGTTGCTTGACGTCTATTTACGTTTGGAAAATTTACACAACCTTCATTGCAGGTCAAAGACTGCACCAAATGAATCTGAATTCGCCCTTGAAAATTGATGGTCTTTTGCCCCTTGTGAGTTGCAATCCAACTTTGTATTTCTTGACCTTTGAGTCTGACTTGGCTAACATAAAAAAGAGCTTTCCCTTGTGCTAATGAACAAAATCATAAAAAAATCACGATTCATGTACATTTGCGATAAATTTAGAATTAAGCATATTTCTACAACAAATGGTCAAGTACTTCTTGTACTAGTGATTAGGTGAAATGGTTTCATTTTCGATGGTTTTCTTGAAATTTTCAACATTCTGAGATTCAAGGTTGTAGATCCATCTTAAAAGTAATCATTACGATGTCCACCTGATGTGGCCTTTTTCATAAACGAATATTCTATTCTTTTAGTAATTATGTTAATAAATGATAAGCACCTGAAAAATATTGATAAAGAGGAGAAAAGCAGCCTAGGAGCCGGAACCCGGCCTGAAGAAACTACAAAAAAGAATTGCATAGCATTTTATACTACAAATTCTTTTCTCTTTAACTTAATTTCATAATCGGTTTGGTTTTATTTTGTTCCCTGTAGATTAATGAAACGAAGCTATCTTTTGTAGCAGTTGCAGAAGCGACACCGCTCGTAAGTACATTAGCTTCAACAGAAATAGAGTCTGGTGGGCTTTTGGTTATCGGACCTGAAGGAGGTATATTTTATATTATACTCGTGCTTTCTGAAGATTAGTGCAATTTTCCTGCAATACTAAAAAGAGGTTTTTAGTGTAGTTAGTGTTTCAACATTCTGATGAAGAGGCATATTAAAGTCTTACAAACTTCAGCATTCTGTAATCTGTCATGAGTAGCATTTTTCTTTTTTAACTTTGTGATGGACTAAATGTCCATCAATATGTCAATTTGGTTGTGGTGGATGTATTCGTCGTCAAACTAATCTACCAAGAAATAGAGTAATAGCTCTTATACTAAATACTTTTTACCAGGAATTTTATCGTGCATGGAAAATTACCTATGTTATCTATTGTTAATTGTCCACCTACGGAATAAATAAACCGTGGAAAGCAGTGGTTAATGTAATGCAAACAATTGTTTGGGTTACCAGATCATTTTAATCTTGTTAGTGACGTTAACTAGTACTTGAATGACATTTCCCTTTCATGCTGGAGAATATCTAGAAATCCTTTACTTCTCTTCATTTAGTGCCATGCCTTTTTTTTAATTTCTTTTTCTTCATCTTTTCCTCTTTTTTTATTCTTCAGACTTCACCGAGAAAGAGGTGAACATGATGAAAGAAGCTGGAGCAATTGCAGTTGGTCTTGGCCCTTATCGACTTCGTGTTGAAACTGCAACAGTCGCAATCTTATCAACCCTCATGTTATGGTCCGACTCAAAAAGTTCCAACTGTTAATCTTCCTTTCAGGTTAGCCGACCATCATATATTTCTGTATTGATAAATCAGATTTTCCTGCATATATTTATCTAATTTATTTTTCTTCAAGGATGAACTAAAAGTTAGAACGTGAAATAGATTTTGAAGGTAATATTAAATACCATTTTTGTCGTTGAACTTTTAAATGTTGTCTTAAACCGTCAACTTCAAATGTTCTATTGTAGGTTTTTTCAGGAAAAGTCTAGTCATTATTTTAATTTCTCATTAATCATTTAAAAGGAACCTAAAATCATTTGCAAACCTACCAAAACATGTTGTGGCTTGTTGGCTTAGTGGACTGCAGAGTTAGGCAGACTCAATGTTGAATCCACAGGTCGCAGGTCCCATCTGTTTAGGTATGAAGATGAAGATGGATTTAACTTTGGTGTTAGTAAATAAATAAAATCATTTGCAAACCTGACTCCTAGTCTACTATATGAGACTCAAACACTTGTCTACATAGATGTTTTAGGTAAATGCACACAAGATGTGTACCTATATCAAGTTTCTATTGAATCGTTGGTTAAAAAGTTAATATCAATCACATTCCAAGTTTGAGGACTAAAATAAAACATTTCATAGTTTATAGACCTAAGACAGAAGAGGCAAGAAAATAAGACTGAATATATTTCATACAAATTTTCCTTTCTTCTTATTGAATGGACAAAAGTTTGGTTTATTCCACAAAGTAGAGTTTGTTAGTTTTTGTAAACTAGATGTTGCTTCTAGTATATGTTTCACCTTGAGAGACTATTACTCTTGAAACTCCTTAAAATTTTCTTAAGAAAATAATGTGAATTTGTCAAGCTTAGATTCTCTCTTTGTATACAAGGTTTTGTATCTGATATTATTCATATAACATAGTAGAGACTTAGAAGAGCAAAGCTAACAATGAATGTAGTTTCTATCATTATTTCTTAAGGTGTGTAAGGTGAAAGTATTCTTTCATACAAAATTATTGCCTTGGTGTTTGCTAAATAGATCAACTGACAATGGTAGTTTCTATCATTAAATTTCAAAAAAGTTTCTACTTAGAACACTAGAATCCATTCTAGTAGCTTCTAACCTTTTATGTTCACCGATGACAGGGTAGCTTCAAAATCAGCACCACTGCAAAGCCTCAACTGTGTATTACGAGGAAGATTTCCTAATATGATAGGATTTATTGACATCACTATGGAGCGCATAAATATTAATGAAGACAAAAGTTATAGTGTAAACACAAATTGTATTGATTATGGGAATACTAAAAAAAATTTCTTGTATTATGGTCATTTTTGTTTTAGCAAACTACATAGAATAGGAATGCGTTAGCCATTACTTCGTTTTTCGTTTGACTTTTGATTTAAGAGATTGAAAATGTATTGGGATCGCTTTTTCAAACTCTATGTTATAC

mRNA sequence

ATGTTCCATAGTTGTTGTTCTTCCCAAATGCGAACTATAGGAGCATTTCGACCTCAATTGACACAGTTATTGAACCCCTCATGTTTCAGAAGCTTCAAAGTTAGAGCTCTATCCTCTTCATCTCTGCCCTCCTCGAATCAATCTCGCGGTGGCCTTCCTCGCTTCTTCTCCCAAGTTCTACCTTCTTATAAGGGTGATGTTATTCGTCTAGAAGGCGGTGAAGTCTGGCATATGACTAAAGTATTGAGGTTGAAGACTGATGATAGGGTGGAGCTGTTCAATGGAAATGGAGGTTTAGTTGAAGGGAGCATAAAGAACATTCGTGTCAACGGACTTGACATTCTGGCTATGGAAGAACCAAAATCTGTTTTACCTCAAAGCACACAATGGCATGTATTTGCAGCTTGCGGTACTCTAAAGGGTGGTCGTGCTGATTGGCTTGTTGAAAAATGTACGGAACTGGGTGCCAGCAGTGTAACTCCTCTGCTAACAGAACGTTGCCCTACCATATCTGATAACCGGGTACACAGATTTGAACGTATCACATTGGCAGCAACTAAACAATGTCAAAGACTGCACCAAATGAATCTGAATTCGCCCTTGAAAATTGATGGTCTTTTGCCCCTTATTAATGAAACGAAGCTATCTTTTGTAGCAGTTGCAGAAGCGACACCGCTCGTAAGTACATTAGCTTCAACAGAAATAGAGTCTGGTGGGCTTTTGGTTATCGGACCTGAAGGAGACTTCACCGAGAAAGAGGTGAACATGATGAAAGAAGCTGGAGCAATTGCAGTTGGTCTTGGCCCTTATCGACTTCGTGTTGAAACTGCAACAGTCGCAATCTTATCAACCCTCATGTTATGGTCCGACTCAAAAAGTTCCAACTGTTAATCTTCCTTTCAGGGTAGCTTCAAAATCAGCACCACTGCAAAGCCTCAACTGTGTATTACGAGGAAGATTTCCTAATATGATAGGATTTATTGACATCACTATGGAGCGCATAAATATTAATGAAGACAAAAGTTATAGTGTAAACACAAATTGTATTGATTATGGGAATACTAAAAAAAATTTCTTGTATTATGGTCATTTTTGTTTTAGCAAACTACATAGAATAGGAATGCGTTAGCCATTACTTCGTTTTTCGTTTGACTTTTGATTTAAGAGATTGAAAATGTATTGGGATCGCTTTTTCAAACTCTATGTTATAC

Coding sequence (CDS)

ATGTTCCATAGTTGTTGTTCTTCCCAAATGCGAACTATAGGAGCATTTCGACCTCAATTGACACAGTTATTGAACCCCTCATGTTTCAGAAGCTTCAAAGTTAGAGCTCTATCCTCTTCATCTCTGCCCTCCTCGAATCAATCTCGCGGTGGCCTTCCTCGCTTCTTCTCCCAAGTTCTACCTTCTTATAAGGGTGATGTTATTCGTCTAGAAGGCGGTGAAGTCTGGCATATGACTAAAGTATTGAGGTTGAAGACTGATGATAGGGTGGAGCTGTTCAATGGAAATGGAGGTTTAGTTGAAGGGAGCATAAAGAACATTCGTGTCAACGGACTTGACATTCTGGCTATGGAAGAACCAAAATCTGTTTTACCTCAAAGCACACAATGGCATGTATTTGCAGCTTGCGGTACTCTAAAGGGTGGTCGTGCTGATTGGCTTGTTGAAAAATGTACGGAACTGGGTGCCAGCAGTGTAACTCCTCTGCTAACAGAACGTTGCCCTACCATATCTGATAACCGGGTACACAGATTTGAACGTATCACATTGGCAGCAACTAAACAATGTCAAAGACTGCACCAAATGAATCTGAATTCGCCCTTGAAAATTGATGGTCTTTTGCCCCTTATTAATGAAACGAAGCTATCTTTTGTAGCAGTTGCAGAAGCGACACCGCTCGTAAGTACATTAGCTTCAACAGAAATAGAGTCTGGTGGGCTTTTGGTTATCGGACCTGAAGGAGACTTCACCGAGAAAGAGGTGAACATGATGAAAGAAGCTGGAGCAATTGCAGTTGGTCTTGGCCCTTATCGACTTCGTGTTGAAACTGCAACAGTCGCAATCTTATCAACCCTCATGTTATGGTCCGACTCAAAAAGTTCCAACTGTTAA

Protein sequence

MFHSCCSSQMRTIGAFRPQLTQLLNPSCFRSFKVRALSSSSLPSSNQSRGGLPRFFSQVLPSYKGDVIRLEGGEVWHMTKVLRLKTDDRVELFNGNGGLVEGSIKNIRVNGLDILAMEEPKSVLPQSTQWHVFAACGTLKGGRADWLVEKCTELGASSVTPLLTERCPTISDNRVHRFERITLAATKQCQRLHQMNLNSPLKIDGLLPLINETKLSFVAVAEATPLVSTLASTEIESGGLLVIGPEGDFTEKEVNMMKEAGAIAVGLGPYRLRVETATVAILSTLMLWSDSKSSNC

Homology

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BLAST of PI0011827 vs. ExPASy Swiss-Prot
Match: Q8K9E4 (Ribosomal RNA small subunit methyltransferase E OS=Buchnera aphidicola subsp. Schizaphis graminum (strain Sg) OX=198804 GN=rsmE PE=3 SV=1)

HSP 1 Score: 82.0 bits (201), Expect = 1.2e-14
Identity = 66/245 (26.94%), Postives = 119/245 (48.57%), Query Frame = 0


Query: 54  RFFSQVLPSYKGDVIRLEGGEVWHMTKVLRLKTDDRVELFNGNGGLVEGSIKNIRVNGLD 113
           ++F Q+       VI L      ++ KVLR+K  D++E+FN    +    I  I  + ++
Sbjct: 11  KYFLQI-----NQVISLSKSYTHYIKKVLRMKKKDKLEIFNNTNYIFFSEILEINNHTIE 70

Query: 114 ILAMEEPKSVLPQSTQWHVFAACGTLKGGRADWLVEKCTELGASSVTPLLTERCP----- 173
           I+ +++    L      H+       K  + ++ ++K  ELG +++TPL +E C      
Sbjct: 71  IIILKKQIKNLESPLLIHLGQVIS--KNEKMNFSIQKSVELGVNTITPLFSEYCNFQNKL 130

Query: 174 -TISDNRVHRFERITLAATKQCQRLHQMNLNSPLKIDGLLPLI-----NETKLSFVAVAE 233
                 ++H +E I +++ +QC R +   + +P   + +LP       NETK+ F     
Sbjct: 131 ICFPKKKIH-WENIVISSCEQCHRNNIPEIKNP---EYILPWCKRTYENETKIVF--SPS 190

Query: 234 ATPLVSTLASTEIESGGLLVIGPEGDFTEKEVNMMKEAGAIAVGLGPYRLRVETATVAIL 288
           AT  ++ L   E  +   L+IG EG F+  E+  + + G I + LGP  LR ETA +A +
Sbjct: 191 ATFTINEL--PEKINCVRLLIGSEGGFSFLEIEKIIQYGFIPIKLGPRILRTETAVIAAI 240

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BLAST of PI0011827 vs. ExPASy Swiss-Prot
Match: Q92J59 (Ribosomal RNA small subunit methyltransferase E OS=Rickettsia conorii (strain ATCC VR-613 / Malish 7) OX=272944 GN=rsmE PE=3 SV=2)

HSP 1 Score: 79.3 bits (194), Expect = 7.9e-14
Identity = 58/214 (27.10%), Postives = 98/214 (45.79%), Query Frame = 0


Query: 75  VWHMTKVLRLKTDDRVELFNGNGGLVEGSIKNIRVNGLDILAMEEPKSVLPQSTQWHVFA 134
           V ++  VLRLK +D + LFNG  G     I +I  N L +   E+ K    +ST   +  
Sbjct: 26  VHYVKTVLRLKVNDGLRLFNGTDGEFLAQINDIGKNNLSVRLKEQLKKPYTKST---LTL 85

Query: 135 ACGTLKGGRADWLVEKCTELGASSVTPLLTERCPTISDNRVHRFERITLAATKQCQRLHQ 194
           A   +K  +    +   T+LG + + PL+T  C   S N + R  +  + AT+Q +RL  
Sbjct: 86  AVAIIKQDKLMLAINMATQLGITKIIPLITRWCQFRSVN-IERLTKCVIEATEQSERLTP 145

Query: 195 MNLNSPLKIDGLLPLINETKLSFVAVAEATPLVSTLASTEIESGGLLVIGPEGDFTEKEV 254
             +   + I   L   N   L      +    +  ++S+   S   +++GPEG FT  E+
Sbjct: 146 PIIEKAITIQDYLKKNNNLMLYANEHEKEENSILRISSSLSNSDITIIVGPEGGFTNDEL 205

Query: 255 NMMKE-AGAIAVGLGPYRLRVETATVAILSTLML 288
            ++       ++ LG   LR ETA +  ++ + L
Sbjct: 206 ELLASYKNTKSISLGSNILRAETAAITAIAQVRL 235

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BLAST of PI0011827 vs. ExPASy Swiss-Prot
Match: O66552 (Ribosomal RNA small subunit methyltransferase E OS=Aquifex aeolicus (strain VF5) OX=224324 GN=rsmE PE=1 SV=1)

HSP 1 Score: 78.2 bits (191), Expect = 1.8e-13
Identity = 61/226 (26.99%), Postives = 110/226 (48.67%), Query Frame = 0


Query: 64  KGDVIRLEGGEVWHMTKVLRLKTDDRVELFNGNGGLVEGSIKNIRVNGLDILAMEEPKSV 123
           +G+++ L  GEV H  +V R++ D+   + +  G +    ++      +    +EE ++ 
Sbjct: 10  RGNLLILREGEVKHF-RVRRIEKDEEFGVIH-EGKIYVCKVRREDKREISCEIVEELETK 69

Query: 124 LPQSTQWHVFAACGTLKGGRADWLVEKCTELGASSVTPLLTERCPTISD---NRVHRFER 183
           LP        +    LK    D +V + TELG  +  P+++ER     +    +  +++R
Sbjct: 70  LPPKDITLYQSVTVDLK--TMDTIVRQATELGVLTFVPIISERSFQKEEAILKKTEKWKR 129

Query: 184 ITLAATKQCQRLHQMNLNSPLKIDGLLPLINETKLSFVAVAEATPLVSTLASTEIESGGL 243
           I + A KQ +R   M +  P+++  L+P   E  +         P    L +        
Sbjct: 130 IVIEAMKQSRRPIPMEIKKPVRLSDLIPESEENIILDNFYEGVKPKDVNLEAKTYS---- 189

Query: 244 LVIGPEGDFTEKEVNMMKEAGAIAVGLGPYRLRVETATVAILSTLM 287
           +V+GPEG F+++E  +++E G  +V L PY LR ETA V+I+S LM
Sbjct: 190 VVVGPEGGFSKRESQILREKGFKSVLLEPYTLRTETAVVSIVSILM 227

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BLAST of PI0011827 vs. ExPASy Swiss-Prot
Match: P54461 (Ribosomal RNA small subunit methyltransferase E OS=Bacillus subtilis (strain 168) OX=224308 GN=rsmE PE=1 SV=1)

HSP 1 Score: 77.0 bits (188), Expect = 3.9e-13
Identity = 59/227 (25.99%), Postives = 101/227 (44.49%), Query Frame = 0


Query: 70  LEGGEVWHMTKVLRLKTDDRVELFNGNGGLVEGSIKNIRVNGLDILAMEEPKSVLPQSTQ 129
           + G EV H+  V+R+   D++   + +G   +  ++++  + +  L +E       +   
Sbjct: 21  ITGEEVHHIVNVMRMNEGDQIICCSQDGFEAKCELQSVSKDKVSCLVIEWTNE--NRELP 80

Query: 130 WHVFAACGTLKGGRADWLVEKCTELGASSVTPLLTERCPTISDNRV-----HRFERITLA 189
             V+ A G  KG + +W+++K TELGA +  P    R     D++       R+ +I   
Sbjct: 81  IKVYIASGLPKGDKLEWIIQKGTELGAHAFIPFQAARSVVKLDDKKAKKKRERWTKIAKE 140

Query: 190 ATKQCQRLHQMNLNSPLKIDGLLPLINETKLSFVAVAEA------TPLVSTLASTEIESG 249
           A +Q  R     +        LL  + +     VA  E+      +   + ++S    S 
Sbjct: 141 AAEQSYRNEVPRVMDVHSFQQLLQRMQDFDKCVVAYEESSKQGEISAFSAIVSSLPKGSS 200

Query: 250 GLLVIGPEGDFTEKEVNMMKEAGAIAVGLGPYRLRVETATVAILSTL 286
            L+V GPEG  TE EV  + E   +  GLGP  LR ETA +  LS +
Sbjct: 201 LLIVFGPEGGLTEAEVERLTEQDGVTCGLGPRILRTETAPLYALSAI 245

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BLAST of PI0011827 vs. ExPASy Swiss-Prot
Match: P44627 (Ribosomal RNA small subunit methyltransferase E OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) OX=71421 GN=rsmE PE=1 SV=1)

HSP 1 Score: 76.3 bits (186), Expect = 6.7e-13
Identity = 59/222 (26.58%), Postives = 113/222 (50.90%), Query Frame = 0


Query: 77  HMTKVLRLKTDDRVELFNGN-----GGLVEGSIKNIRVNGLDILAMEEPKSVLPQSTQWH 136
           H+ +VLR+   +++ELF+G+       ++E + K+++V   +IL  E    +  + +   
Sbjct: 27  HVARVLRMTEGEQLELFDGSNHIYPAKIIESNKKSVKV---EILGRE----LADKESHLK 86

Query: 137 VFAACGTLKGGRADWLVEKCTELGASSVTPLLTERC-----PTISDNRVHRFERITLAAT 196
           +       +G R ++ ++K  ELG + +TPL +ERC         D ++ ++++I +AA 
Sbjct: 87  IHLGQVISRGERMEFTIQKSVELGVNVITPLWSERCGVKLDAERMDKKIQQWQKIAIAAC 146

Query: 197 KQCQRLHQMNLNSPLKIDGLLPLINETKLSFVAVAEATPLVSTLASTEIESGGL-LVIGP 256
           +QC R     +   +K+       N+  L       A   + TL +  I +GG+ L+IG 
Sbjct: 147 EQCGRNIVPEIRPLMKLQDWC-AENDGALKLNLHPRAHYSIKTLPT--IPAGGVRLLIGS 206

Query: 257 EGDFTEKEVNMMKEAGAIAVGLGPYRLRVETATVAILSTLML 288
           EG  + +E+   ++ G   + LG   LR ETA++A +S L +
Sbjct: 207 EGGLSAQEIAQTEQQGFTEILLGKRVLRTETASLAAISALQI 238

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BLAST of PI0011827 vs. ExPASy TrEMBL
Match: A0A1S3BZZ7 (16S rRNA (uracil(1498)-N(3))-methyltransferase OS=Cucumis melo OX=3656 GN=LOC103495322 PE=3 SV=1)

HSP 1 Score: 565.1 bits (1455), Expect = 1.8e-157
Identity = 284/296 (95.95%), Postives = 289/296 (97.64%), Query Frame = 0


Query: 1   MFHSCCSSQMRTIGAFRPQLTQLLNPSCFRSFKVRALSSSSLPSSNQSRGGLPRFFSQVL 60
           MFHSCC SQMRTIGAFRPQLTQLL PS  RSFKVRALSSSSLPSSNQSRGGLPRFFSQVL
Sbjct: 1   MFHSCCPSQMRTIGAFRPQLTQLLIPSSLRSFKVRALSSSSLPSSNQSRGGLPRFFSQVL 60

Query: 61  PSYKGDVIRLEGGEVWHMTKVLRLKTDDRVELFNGNGGLVEGSIKNIRVNGLDILAMEEP 120
           PS+KGDVIRLEG EVWHMTKVLRLKT+DRVELFNGNGGLVEGSIKN+RVNGLDILAMEEP
Sbjct: 61  PSHKGDVIRLEGDEVWHMTKVLRLKTNDRVELFNGNGGLVEGSIKNVRVNGLDILAMEEP 120

Query: 121 KSVLPQSTQWHVFAACGTLKGGRADWLVEKCTELGASSVTPLLTERCPTISDNRVHRFER 180
           KSVLPQSTQWHVFAACGTLKGGRADWLVEKCTELGASSVTPLLTERCPTISDNRVHRFER
Sbjct: 121 KSVLPQSTQWHVFAACGTLKGGRADWLVEKCTELGASSVTPLLTERCPTISDNRVHRFER 180

Query: 181 ITLAATKQCQRLHQMNLNSPLKIDGLLPLINETKLSFVAVAEATPLVSTLASTEIESGGL 240
           ITLAATKQCQRLHQMNLNSPLKIDGLLPLINETKLSFVAVAEATPLVS LAST+IESGGL
Sbjct: 181 ITLAATKQCQRLHQMNLNSPLKIDGLLPLINETKLSFVAVAEATPLVSALASTKIESGGL 240

Query: 241 LVIGPEGDFTEKEVNMMKEAGAIAVGLGPYRLRVETATVAILSTLMLWSDSKSSNC 297
           LVIGPEGDFTEKEV+MMKEAGAIAVGLGPYRLRVETATVAILSTLMLWSDSK SNC
Sbjct: 241 LVIGPEGDFTEKEVSMMKEAGAIAVGLGPYRLRVETATVAILSTLMLWSDSKCSNC 296

[Close]

BLAST of PI0011827 vs. ExPASy TrEMBL
Match: A0A5A7SPG3 (16S rRNA (uracil(1498)-N(3))-methyltransferase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold139G001330 PE=3 SV=1)

HSP 1 Score: 547.7 bits (1410), Expect = 2.9e-152
Identity = 279/296 (94.26%), Postives = 283/296 (95.61%), Query Frame = 0


Query: 1   MFHSCCSSQMRTIGAFRPQLTQLLNPSCFRSFKVRALSSSSLPSSNQSRGGLPRFFSQVL 60
           MFHSCC SQMRTIGAFRPQLTQLL PS  RSFKVRALSSSSLPSSNQSRGGLPRFFSQ  
Sbjct: 1   MFHSCCPSQMRTIGAFRPQLTQLLIPSSLRSFKVRALSSSSLPSSNQSRGGLPRFFSQ-- 60

Query: 61  PSYKGDVIRLEGGEVWHMTKVLRLKTDDRVELFNGNGGLVEGSIKNIRVNGLDILAMEEP 120
               GDVIRLEG EVWHMTKVLRLKT+DRVELFNGNGGLVEGSIKN+RVNGLDILAMEEP
Sbjct: 61  ----GDVIRLEGDEVWHMTKVLRLKTNDRVELFNGNGGLVEGSIKNVRVNGLDILAMEEP 120

Query: 121 KSVLPQSTQWHVFAACGTLKGGRADWLVEKCTELGASSVTPLLTERCPTISDNRVHRFER 180
           KSVLPQSTQWHVFAACGTLKGGRADWLVEKCTELGASSVTPLLTERCPTISDNRVHRFER
Sbjct: 121 KSVLPQSTQWHVFAACGTLKGGRADWLVEKCTELGASSVTPLLTERCPTISDNRVHRFER 180

Query: 181 ITLAATKQCQRLHQMNLNSPLKIDGLLPLINETKLSFVAVAEATPLVSTLASTEIESGGL 240
           ITLAATKQCQRLHQMNLNSPLKIDGLLPLINETKLSFVAVAEATPLVS LAST+IESGGL
Sbjct: 181 ITLAATKQCQRLHQMNLNSPLKIDGLLPLINETKLSFVAVAEATPLVSALASTKIESGGL 240

Query: 241 LVIGPEGDFTEKEVNMMKEAGAIAVGLGPYRLRVETATVAILSTLMLWSDSKSSNC 297
           LVIGPEGDFTEKEV+MMKEAGAIAVGLGPYRLRVETATVAILSTLMLWSDSK SNC
Sbjct: 241 LVIGPEGDFTEKEVSMMKEAGAIAVGLGPYRLRVETATVAILSTLMLWSDSKCSNC 290

[Close]

BLAST of PI0011827 vs. ExPASy TrEMBL
Match: A0A5D3C8Z9 (16S rRNA (uracil(1498)-N(3))-methyltransferase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G001330 PE=3 SV=1)

HSP 1 Score: 544.7 bits (1402), Expect = 2.5e-151
Identity = 280/309 (90.61%), Postives = 285/309 (92.23%), Query Frame = 0


Query: 1   MFHSCCSSQMRTIGAFRPQLTQLLNPSCFRSFKVRALSSSSLPSSNQSRGGLPRFFSQ-- 60
           MFHSCC SQMRTIGAFRPQLTQLL PS  RSFKVRALSSSSLPSSNQSRGGLPRFFSQ  
Sbjct: 1   MFHSCCPSQMRTIGAFRPQLTQLLIPSSLRSFKVRALSSSSLPSSNQSRGGLPRFFSQWS 60

Query: 61  -----------VLPSYKGDVIRLEGGEVWHMTKVLRLKTDDRVELFNGNGGLVEGSIKNI 120
                      V+    GDVIRLEG EVWHMTKVLRLKT+DRVELFNGNGGLVEGSIKN+
Sbjct: 61  VDDSEFWETKNVVIMSGGDVIRLEGDEVWHMTKVLRLKTNDRVELFNGNGGLVEGSIKNV 120

Query: 121 RVNGLDILAMEEPKSVLPQSTQWHVFAACGTLKGGRADWLVEKCTELGASSVTPLLTERC 180
           RVNGLDILAMEEPKSVLPQSTQWHVFAACGTLKGGRADWLVEKCTELGASSVTPLLTERC
Sbjct: 121 RVNGLDILAMEEPKSVLPQSTQWHVFAACGTLKGGRADWLVEKCTELGASSVTPLLTERC 180

Query: 181 PTISDNRVHRFERITLAATKQCQRLHQMNLNSPLKIDGLLPLINETKLSFVAVAEATPLV 240
           PTISDNRVHRFERITLAATKQCQRLHQMNLNSPLKIDGLLPLINETKLSFVAVAEATPLV
Sbjct: 181 PTISDNRVHRFERITLAATKQCQRLHQMNLNSPLKIDGLLPLINETKLSFVAVAEATPLV 240

Query: 241 STLASTEIESGGLLVIGPEGDFTEKEVNMMKEAGAIAVGLGPYRLRVETATVAILSTLML 297
           S LAST+IESGGLLVIGPEGDFTEKEV+MMKEAGAIAVGLGPYRLRVETATVAILSTLML
Sbjct: 241 SALASTKIESGGLLVIGPEGDFTEKEVSMMKEAGAIAVGLGPYRLRVETATVAILSTLML 300

[Close]

BLAST of PI0011827 vs. ExPASy TrEMBL
Match: A0A6J1IBI6 (16S rRNA (uracil(1498)-N(3))-methyltransferase OS=Cucurbita maxima OX=3661 GN=LOC111470992 PE=3 SV=1)

HSP 1 Score: 542.7 bits (1397), Expect = 9.3e-151
Identity = 272/295 (92.20%), Postives = 283/295 (95.93%), Query Frame = 0


Query: 1   MFHSCCSSQMRTIGAFRPQLTQLLNPSCFRSFKVRALSSSSLPSSNQSRGGLPRFFSQVL 60
           MFHSC S QMRTIGA RPQLT+L + SCFRSF+VRALSSSSL SSNQSRGGLPRFFSQVL
Sbjct: 18  MFHSCSSLQMRTIGAIRPQLTELFDRSCFRSFRVRALSSSSLASSNQSRGGLPRFFSQVL 77

Query: 61  PSYKGDVIRLEGGEVWHMTKVLRLKTDDRVELFNGNGGLVEGSIKNIRVNGLDILAMEEP 120
           PSYKGD+IRLEG EVWHMTKVLRLKTDDRVELFNGNGGLVEGSIKNIRVNG+DILAME+P
Sbjct: 78  PSYKGDIIRLEGDEVWHMTKVLRLKTDDRVELFNGNGGLVEGSIKNIRVNGIDILAMEDP 137

Query: 121 KSVLPQSTQWHVFAACGTLKGGRADWLVEKCTELGASSVTPLLTERCPTISDNRVHRFER 180
           KSVLPQSTQWHVFAACGTLKGGRADWLVEKCTELGASSVTPLLTERC TISDNRVHRFER
Sbjct: 138 KSVLPQSTQWHVFAACGTLKGGRADWLVEKCTELGASSVTPLLTERCATISDNRVHRFER 197

Query: 181 ITLAATKQCQRLHQMNLNSPLKIDGLLPLINETKLSFVAVAEATPLVSTLASTEIESGGL 240
           ITLAATKQCQRLHQM+LNSPLKIDGLL +INE+KLSFVAVAEATPLVS LAS E ESGGL
Sbjct: 198 ITLAATKQCQRLHQMSLNSPLKIDGLLHIINESKLSFVAVAEATPLVSALASIETESGGL 257

Query: 241 LVIGPEGDFTEKEVNMMKEAGAIAVGLGPYRLRVETATVAILSTLMLWSDSKSSN 296
           LV+GPEGDFTEKEVNM+KEAGAIAVGLGPYRLRVETATVAILSTLMLWSDSKSSN
Sbjct: 258 LVVGPEGDFTEKEVNMIKEAGAIAVGLGPYRLRVETATVAILSTLMLWSDSKSSN 312

[Close]

BLAST of PI0011827 vs. ExPASy TrEMBL
Match: A0A6J1GL34 (16S rRNA (uracil(1498)-N(3))-methyltransferase OS=Cucurbita moschata OX=3662 GN=LOC111454941 PE=3 SV=1)

HSP 1 Score: 538.5 bits (1386), Expect = 1.8e-149
Identity = 272/295 (92.20%), Postives = 280/295 (94.92%), Query Frame = 0


Query: 1   MFHSCCSSQMRTIGAFRPQLTQLLNPSCFRSFKVRALSSSSLPSSNQSRGGLPRFFSQVL 60
           MFHS  S QMRTIGA RPQLT+L N SCFRSF VRALSSSSL SSNQSRGGLPRFFSQVL
Sbjct: 18  MFHSSSSLQMRTIGAIRPQLTELFNRSCFRSFGVRALSSSSLASSNQSRGGLPRFFSQVL 77

Query: 61  PSYKGDVIRLEGGEVWHMTKVLRLKTDDRVELFNGNGGLVEGSIKNIRVNGLDILAMEEP 120
           PSYKGDVIRLEG EVWHMTKVLRLKTDDRVELFNGNGGLVEGSIKN+RVNGLDILAME+P
Sbjct: 78  PSYKGDVIRLEGDEVWHMTKVLRLKTDDRVELFNGNGGLVEGSIKNVRVNGLDILAMEDP 137

Query: 121 KSVLPQSTQWHVFAACGTLKGGRADWLVEKCTELGASSVTPLLTERCPTISDNRVHRFER 180
           KSVLPQSTQWHVFAACGTLKGGRADWLVEKCTELGASSVTPLLTERC TISDNRVHRFER
Sbjct: 138 KSVLPQSTQWHVFAACGTLKGGRADWLVEKCTELGASSVTPLLTERCATISDNRVHRFER 197

Query: 181 ITLAATKQCQRLHQMNLNSPLKIDGLLPLINETKLSFVAVAEATPLVSTLASTEIESGGL 240
           ITLAATKQCQRLHQM+LNSPLKIDGLL +INE+KLSFVAVAEATPLVS LAS E ESGGL
Sbjct: 198 ITLAATKQCQRLHQMSLNSPLKIDGLLHIINESKLSFVAVAEATPLVSALASIETESGGL 257

Query: 241 LVIGPEGDFTEKEVNMMKEAGAIAVGLGPYRLRVETATVAILSTLMLWSDSKSSN 296
           LV+GPEGDFTEKEVNMMKEAGAI VGLGPYRLRVETATVAILSTLMLWSDS+SSN
Sbjct: 258 LVVGPEGDFTEKEVNMMKEAGAIPVGLGPYRLRVETATVAILSTLMLWSDSRSSN 312

[Close]

BLAST of PI0011827 vs. NCBI nr
Match: XP_004136932.2 (uncharacterized protein LOC101213733 isoform X1 [Cucumis sativus] >XP_031744709.1 uncharacterized protein LOC101213733 isoform X1 [Cucumis sativus] >KGN43899.2 hypothetical protein Csa_017251 [Cucumis sativus])

HSP 1 Score: 576.6 bits (1485), Expect = 1.2e-160
Identity = 289/296 (97.64%), Postives = 291/296 (98.31%), Query Frame = 0


Query: 1   MFHSCCSSQMRTIGAFRPQLTQLLNPSCFRSFKVRALSSSSLPSSNQSRGGLPRFFSQVL 60
           MFHSCCSSQMRTIGAFRPQLTQLLNPSCFRSFKVRALSSSSLPSSNQSRGGLPRFFSQVL
Sbjct: 1   MFHSCCSSQMRTIGAFRPQLTQLLNPSCFRSFKVRALSSSSLPSSNQSRGGLPRFFSQVL 60

Query: 61  PSYKGDVIRLEGGEVWHMTKVLRLKTDDRVELFNGNGGLVEGSIKNIRVNGLDILAMEEP 120
           PSYKGDVIRLEG EVWHMTKVLRLKTDDRVELFNGNGGLVEGSIKNIRVNGL+ILAMEEP
Sbjct: 61  PSYKGDVIRLEGDEVWHMTKVLRLKTDDRVELFNGNGGLVEGSIKNIRVNGLEILAMEEP 120

Query: 121 KSVLPQSTQWHVFAACGTLKGGRADWLVEKCTELGASSVTPLLTERCPTISDNRVHRFER 180
           KSVLPQSTQWHVFAACGTLKGGRADWLVEKCTELGASSVTPLLTERCPTISDNRV RFER
Sbjct: 121 KSVLPQSTQWHVFAACGTLKGGRADWLVEKCTELGASSVTPLLTERCPTISDNRVQRFER 180

Query: 181 ITLAATKQCQRLHQMNLNSPLKIDGLLPLINETKLSFVAVAEATPLVSTLASTEIESGGL 240
           I LAATKQCQRLHQMNLNSPLKIDGLLP INETKLSFVAVAEATPLVS LAST+IESGGL
Sbjct: 181 IALAATKQCQRLHQMNLNSPLKIDGLLPFINETKLSFVAVAEATPLVSALASTKIESGGL 240

Query: 241 LVIGPEGDFTEKEVNMMKEAGAIAVGLGPYRLRVETATVAILSTLMLWSDSKSSNC 297
           LVIGPEGDFTEKEVNMMKEAGAIAVGLGPYRLRVETATVAILSTLMLWSDSKSSNC
Sbjct: 241 LVIGPEGDFTEKEVNMMKEAGAIAVGLGPYRLRVETATVAILSTLMLWSDSKSSNC 296

[Close]

BLAST of PI0011827 vs. NCBI nr
Match: XP_008455052.1 (PREDICTED: ribosomal RNA small subunit methyltransferase E [Cucumis melo])

HSP 1 Score: 565.1 bits (1455), Expect = 3.6e-157
Identity = 284/296 (95.95%), Postives = 289/296 (97.64%), Query Frame = 0


Query: 1   MFHSCCSSQMRTIGAFRPQLTQLLNPSCFRSFKVRALSSSSLPSSNQSRGGLPRFFSQVL 60
           MFHSCC SQMRTIGAFRPQLTQLL PS  RSFKVRALSSSSLPSSNQSRGGLPRFFSQVL
Sbjct: 1   MFHSCCPSQMRTIGAFRPQLTQLLIPSSLRSFKVRALSSSSLPSSNQSRGGLPRFFSQVL 60

Query: 61  PSYKGDVIRLEGGEVWHMTKVLRLKTDDRVELFNGNGGLVEGSIKNIRVNGLDILAMEEP 120
           PS+KGDVIRLEG EVWHMTKVLRLKT+DRVELFNGNGGLVEGSIKN+RVNGLDILAMEEP
Sbjct: 61  PSHKGDVIRLEGDEVWHMTKVLRLKTNDRVELFNGNGGLVEGSIKNVRVNGLDILAMEEP 120

Query: 121 KSVLPQSTQWHVFAACGTLKGGRADWLVEKCTELGASSVTPLLTERCPTISDNRVHRFER 180
           KSVLPQSTQWHVFAACGTLKGGRADWLVEKCTELGASSVTPLLTERCPTISDNRVHRFER
Sbjct: 121 KSVLPQSTQWHVFAACGTLKGGRADWLVEKCTELGASSVTPLLTERCPTISDNRVHRFER 180

Query: 181 ITLAATKQCQRLHQMNLNSPLKIDGLLPLINETKLSFVAVAEATPLVSTLASTEIESGGL 240
           ITLAATKQCQRLHQMNLNSPLKIDGLLPLINETKLSFVAVAEATPLVS LAST+IESGGL
Sbjct: 181 ITLAATKQCQRLHQMNLNSPLKIDGLLPLINETKLSFVAVAEATPLVSALASTKIESGGL 240

Query: 241 LVIGPEGDFTEKEVNMMKEAGAIAVGLGPYRLRVETATVAILSTLMLWSDSKSSNC 297
           LVIGPEGDFTEKEV+MMKEAGAIAVGLGPYRLRVETATVAILSTLMLWSDSK SNC
Sbjct: 241 LVIGPEGDFTEKEVSMMKEAGAIAVGLGPYRLRVETATVAILSTLMLWSDSKCSNC 296

[Close]

BLAST of PI0011827 vs. NCBI nr
Match: XP_038877548.1 (ribosomal RNA small subunit methyltransferase E isoform X1 [Benincasa hispida])

HSP 1 Score: 554.3 bits (1427), Expect = 6.4e-154
Identity = 280/296 (94.59%), Postives = 287/296 (96.96%), Query Frame = 0


Query: 1   MFHSCCSSQMRTIGAFRPQLTQLLNPSCFRSFKVRALSSSSLPSSNQSRGGLPRFFSQVL 60
           MFHSC SSQMR IGAFRP+LT+LLN   FRSF+VRALSSSSL SSNQSRGGLPRFFSQVL
Sbjct: 1   MFHSCSSSQMRAIGAFRPRLTELLNRLSFRSFRVRALSSSSLASSNQSRGGLPRFFSQVL 60

Query: 61  PSYKGDVIRLEGGEVWHMTKVLRLKTDDRVELFNGNGGLVEGSIKNIRVNGLDILAMEEP 120
           PSYKGDVIRLEG EVWHMTKVLRLKTDDRVELFNGNGGLVEGSIKNIRVNGLDILAME+P
Sbjct: 61  PSYKGDVIRLEGDEVWHMTKVLRLKTDDRVELFNGNGGLVEGSIKNIRVNGLDILAMEDP 120

Query: 121 KSVLPQSTQWHVFAACGTLKGGRADWLVEKCTELGASSVTPLLTERCPTISDNRVHRFER 180
           KSVLPQSTQWHVFAACGTLKGGRADWLVEKCTELGASS+TPLLTERCPTISDNRVHRFER
Sbjct: 121 KSVLPQSTQWHVFAACGTLKGGRADWLVEKCTELGASSLTPLLTERCPTISDNRVHRFER 180

Query: 181 ITLAATKQCQRLHQMNLNSPLKIDGLLPLINETKLSFVAVAEATPLVSTLASTEIESGGL 240
           ITLAATKQCQRLHQM+LNSPLKIDGLL LINETKLSFVAVAEATPLVS LASTEIESGGL
Sbjct: 181 ITLAATKQCQRLHQMDLNSPLKIDGLLHLINETKLSFVAVAEATPLVSALASTEIESGGL 240

Query: 241 LVIGPEGDFTEKEVNMMKEAGAIAVGLGPYRLRVETATVAILSTLMLWSDSKSSNC 297
           LVIGPEGDFTEKEVNMMKEAGAIAVGLGPYRLRVETATVAILSTLMLWSDSKSS+C
Sbjct: 241 LVIGPEGDFTEKEVNMMKEAGAIAVGLGPYRLRVETATVAILSTLMLWSDSKSSSC 296

[Close]

BLAST of PI0011827 vs. NCBI nr
Match: KAA0031377.1 (ribosomal RNA small subunit methyltransferase E [Cucumis melo var. makuwa])

HSP 1 Score: 547.7 bits (1410), Expect = 6.0e-152
Identity = 279/296 (94.26%), Postives = 283/296 (95.61%), Query Frame = 0


Query: 1   MFHSCCSSQMRTIGAFRPQLTQLLNPSCFRSFKVRALSSSSLPSSNQSRGGLPRFFSQVL 60
           MFHSCC SQMRTIGAFRPQLTQLL PS  RSFKVRALSSSSLPSSNQSRGGLPRFFSQ  
Sbjct: 1   MFHSCCPSQMRTIGAFRPQLTQLLIPSSLRSFKVRALSSSSLPSSNQSRGGLPRFFSQ-- 60

Query: 61  PSYKGDVIRLEGGEVWHMTKVLRLKTDDRVELFNGNGGLVEGSIKNIRVNGLDILAMEEP 120
               GDVIRLEG EVWHMTKVLRLKT+DRVELFNGNGGLVEGSIKN+RVNGLDILAMEEP
Sbjct: 61  ----GDVIRLEGDEVWHMTKVLRLKTNDRVELFNGNGGLVEGSIKNVRVNGLDILAMEEP 120

Query: 121 KSVLPQSTQWHVFAACGTLKGGRADWLVEKCTELGASSVTPLLTERCPTISDNRVHRFER 180
           KSVLPQSTQWHVFAACGTLKGGRADWLVEKCTELGASSVTPLLTERCPTISDNRVHRFER
Sbjct: 121 KSVLPQSTQWHVFAACGTLKGGRADWLVEKCTELGASSVTPLLTERCPTISDNRVHRFER 180

Query: 181 ITLAATKQCQRLHQMNLNSPLKIDGLLPLINETKLSFVAVAEATPLVSTLASTEIESGGL 240
           ITLAATKQCQRLHQMNLNSPLKIDGLLPLINETKLSFVAVAEATPLVS LAST+IESGGL
Sbjct: 181 ITLAATKQCQRLHQMNLNSPLKIDGLLPLINETKLSFVAVAEATPLVSALASTKIESGGL 240

Query: 241 LVIGPEGDFTEKEVNMMKEAGAIAVGLGPYRLRVETATVAILSTLMLWSDSKSSNC 297
           LVIGPEGDFTEKEV+MMKEAGAIAVGLGPYRLRVETATVAILSTLMLWSDSK SNC
Sbjct: 241 LVIGPEGDFTEKEVSMMKEAGAIAVGLGPYRLRVETATVAILSTLMLWSDSKCSNC 290

[Close]

BLAST of PI0011827 vs. NCBI nr
Match: TYK06829.1 (ribosomal RNA small subunit methyltransferase E [Cucumis melo var. makuwa])

HSP 1 Score: 544.7 bits (1402), Expect = 5.1e-151
Identity = 280/309 (90.61%), Postives = 285/309 (92.23%), Query Frame = 0


Query: 1   MFHSCCSSQMRTIGAFRPQLTQLLNPSCFRSFKVRALSSSSLPSSNQSRGGLPRFFSQ-- 60
           MFHSCC SQMRTIGAFRPQLTQLL PS  RSFKVRALSSSSLPSSNQSRGGLPRFFSQ  
Sbjct: 1   MFHSCCPSQMRTIGAFRPQLTQLLIPSSLRSFKVRALSSSSLPSSNQSRGGLPRFFSQWS 60

Query: 61  -----------VLPSYKGDVIRLEGGEVWHMTKVLRLKTDDRVELFNGNGGLVEGSIKNI 120
                      V+    GDVIRLEG EVWHMTKVLRLKT+DRVELFNGNGGLVEGSIKN+
Sbjct: 61  VDDSEFWETKNVVIMSGGDVIRLEGDEVWHMTKVLRLKTNDRVELFNGNGGLVEGSIKNV 120

Query: 121 RVNGLDILAMEEPKSVLPQSTQWHVFAACGTLKGGRADWLVEKCTELGASSVTPLLTERC 180
           RVNGLDILAMEEPKSVLPQSTQWHVFAACGTLKGGRADWLVEKCTELGASSVTPLLTERC
Sbjct: 121 RVNGLDILAMEEPKSVLPQSTQWHVFAACGTLKGGRADWLVEKCTELGASSVTPLLTERC 180

Query: 181 PTISDNRVHRFERITLAATKQCQRLHQMNLNSPLKIDGLLPLINETKLSFVAVAEATPLV 240
           PTISDNRVHRFERITLAATKQCQRLHQMNLNSPLKIDGLLPLINETKLSFVAVAEATPLV
Sbjct: 181 PTISDNRVHRFERITLAATKQCQRLHQMNLNSPLKIDGLLPLINETKLSFVAVAEATPLV 240

Query: 241 STLASTEIESGGLLVIGPEGDFTEKEVNMMKEAGAIAVGLGPYRLRVETATVAILSTLML 297
           S LAST+IESGGLLVIGPEGDFTEKEV+MMKEAGAIAVGLGPYRLRVETATVAILSTLML
Sbjct: 241 SALASTKIESGGLLVIGPEGDFTEKEVSMMKEAGAIAVGLGPYRLRVETATVAILSTLML 300

[Close]

BLAST of PI0011827 vs. TAIR 10
Match: AT1G50000.1 (methyltransferases )

HSP 1 Score: 349.0 bits (894), Expect = 3.8e-96
Identity = 184/288 (63.89%), Postives = 216/288 (75.00%), Query Frame = 0


Query: 15  AFRPQLTQLLNPSCFR------SFKVRALSSSSLPSS----NQSRGGLPRFFSQVLPSYK 74
           A RP  + L  PS  R      SFK  A  SSS PS     NQSRGGLPRFFS  LPS K
Sbjct: 8   ASRPLFSDL--PSLVRSWLPTSSFKSFATVSSSPPSDLNLRNQSRGGLPRFFSDDLPSRK 67

Query: 75  GDVIRLEGGEVWHMTKVLRLKTDDRVELFNGNGGLVEGSIKNIRVNGLDILAMEEPKSVL 134
           G V+R++G E WHM KVLRLK +DRVELFNG GGLVEG I++I   G+D +A E+ K +L
Sbjct: 68  GGVVRVQGSEFWHMAKVLRLKQEDRVELFNGKGGLVEGCIQSIDKTGVDFIAQEDQKVIL 127

Query: 135 PQSTQWHVFAACGTLKGGRADWLVEKCTELGASSVTPLLTERCPTISDNRVHRFERITLA 194
           PQ  QW VFAA GTLKGGRADWL+EKCTELGASSVTPLLTER P IS+NRV R ER++ A
Sbjct: 128 PQGMQWQVFAAFGTLKGGRADWLIEKCTELGASSVTPLLTERSPIISENRVDRLERVSFA 187

Query: 195 ATKQCQRLHQMNLNSPLKIDGLLPLINETKLSFVAVAEATPLVSTLASTEIESGGLLVIG 254
           A KQCQRLHQM LN P+K   LL  I ++KL  VA AEA PL++ + S+  ES GLL++G
Sbjct: 188 AAKQCQRLHQMVLNPPIKFGTLLDHILKSKLCLVATAEAKPLLNAVNSSAKESSGLLIVG 247

Query: 255 PEGDFTEKEVNMMKEAGAIAVGLGPYRLRVETATVAILSTLMLWSDSK 293
           PEGDFT+KEV MM EAG  AVGLGP+RLRVETAT+A+L+TL++WSDS+
Sbjct: 248 PEGDFTKKEVEMMLEAGGTAVGLGPHRLRVETATIALLATLVMWSDSQ 293

[Close]

BLAST of PI0011827 vs. TAIR 10
Match: AT1G50000.2 (methyltransferases )

HSP 1 Score: 247.3 bits (630), Expect = 1.6e-65
Identity = 131/203 (64.53%), Postives = 147/203 (72.41%), Query Frame = 0


Query: 15  AFRPQLTQLLNPSCFR------SFKVRALSSSSLPSS----NQSRGGLPRFFSQVLPSYK 74
           A RP  + L  PS  R      SFK  A  SSS PS     NQSRGGLPRFFS  LPS K
Sbjct: 8   ASRPLFSDL--PSLVRSWLPTSSFKSFATVSSSPPSDLNLRNQSRGGLPRFFSDDLPSRK 67

Query: 75  GDVIRLEGGEVWHMTKVLRLKTDDRVELFNGNGGLVEGSIKNIRVNGLDILAMEEPKSVL 134
           G V+R++G E WHM KVLRLK +DRVELFNG GGLVEG I++I   G+D +A E+ K +L
Sbjct: 68  GGVVRVQGSEFWHMAKVLRLKQEDRVELFNGKGGLVEGCIQSIDKTGVDFIAQEDQKVIL 127

Query: 135 PQSTQWHVFAACGTLKGGRADWLVEKCTELGASSVTPLLTERCPTISDNRVHRFERITLA 194
           PQ  QW VFAA GTLKGGRADWL+EKCTELGASSVTPLLTER P IS+NRV R ER++ A
Sbjct: 128 PQGMQWQVFAAFGTLKGGRADWLIEKCTELGASSVTPLLTERSPIISENRVDRLERVSFA 187

Query: 195 ATKQCQRLHQMNLNSPLKIDGLL 208
           A KQCQRLHQM LN P+K   LL
Sbjct: 188 AAKQCQRLHQMVLNPPIKFGTLL 208

The following BLAST results are available for this feature:

BLAST of PI0011827 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8K9E4	1.2e-14	26.94	Ribosomal RNA small subunit methyltransferase E OS=Buchnera aphidicola subsp. Sc...	[more]
Q92J59	7.9e-14	27.10	Ribosomal RNA small subunit methyltransferase E OS=Rickettsia conorii (strain AT...	[more]
O66552	1.8e-13	26.99	Ribosomal RNA small subunit methyltransferase E OS=Aquifex aeolicus (strain VF5)...	[more]
P54461	3.9e-13	25.99	Ribosomal RNA small subunit methyltransferase E OS=Bacillus subtilis (strain 168...	[more]
P44627	6.7e-13	26.58	Ribosomal RNA small subunit methyltransferase E OS=Haemophilus influenzae (strai...	[more]

BLAST of PI0011827 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BZZ7	1.8e-157	95.95	16S rRNA (uracil(1498)-N(3))-methyltransferase OS=Cucumis melo OX=3656 GN=LOC103...	[more]
A0A5A7SPG3	2.9e-152	94.26	16S rRNA (uracil(1498)-N(3))-methyltransferase OS=Cucumis melo var. makuwa OX=11...	[more]
A0A5D3C8Z9	2.5e-151	90.61	16S rRNA (uracil(1498)-N(3))-methyltransferase OS=Cucumis melo var. makuwa OX=11...	[more]
A0A6J1IBI6	9.3e-151	92.20	16S rRNA (uracil(1498)-N(3))-methyltransferase OS=Cucurbita maxima OX=3661 GN=LO...	[more]
A0A6J1GL34	1.8e-149	92.20	16S rRNA (uracil(1498)-N(3))-methyltransferase OS=Cucurbita moschata OX=3662 GN=...	[more]

BLAST of PI0011827 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004136932.2	1.2e-160	97.64	uncharacterized protein LOC101213733 isoform X1 [Cucumis sativus] >XP_031744709....	[more]
XP_008455052.1	3.6e-157	95.95	PREDICTED: ribosomal RNA small subunit methyltransferase E [Cucumis melo]	[more]
XP_038877548.1	6.4e-154	94.59	ribosomal RNA small subunit methyltransferase E isoform X1 [Benincasa hispida]	[more]
KAA0031377.1	6.0e-152	94.26	ribosomal RNA small subunit methyltransferase E [Cucumis melo var. makuwa]	[more]
TYK06829.1	5.1e-151	90.61	ribosomal RNA small subunit methyltransferase E [Cucumis melo var. makuwa]	[more]

BLAST of PI0011827 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G50000.1	3.8e-96	63.89	methyltransferases	[more]
AT1G50000.2	1.6e-65	64.53	methyltransferases	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR029026	tRNA (guanine-N1-)-methyltransferase, N-terminal	GENE3D	3.40.1280.10		coord: 51..295 e-value: 6.2E-62 score: 210.9
IPR006700	Ribosomal RNA small subunit methyltransferase E	TIGRFAM	TIGR00046	TIGR00046	coord: 67..286 e-value: 5.5E-40 score: 135.1
IPR006700	Ribosomal RNA small subunit methyltransferase E	PFAM	PF04452	Methyltrans_RNA	coord: 69..286 e-value: 9.4E-52 score: 175.6
IPR006700	Ribosomal RNA small subunit methyltransferase E	PANTHER	PTHR30027	RIBOSOMAL RNA SMALL SUBUNIT METHYLTRANSFERASE E	coord: 52..292
None	No IPR available	CDD	cd18084	RsmE-like	coord: 135..283 e-value: 4.53971E-45 score: 148.463
IPR015947	PUA-like superfamily	SUPERFAMILY	88697	PUA domain-like	coord: 55..108
IPR029028	Alpha/beta knot methyltransferases	SUPERFAMILY	75217	alpha/beta knot	coord: 128..289

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0011827.1	PI0011827.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0032259	methylation
biological_process	GO:0006364	rRNA processing
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0008168	methyltransferase activity