PI0011785 (gene) Melon (PI 482460) v1

Overview


Name	PI0011785
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Unknown protein
Location	chr07: 448481 .. 449053 (+)
RNA-Seq Expression	PI0011785
Synteny	PI0011785

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTAATTCTCTTGTTTTTTTCAGCTATAAATACAAGGCATGGGAAAGCCAATAGAAACCATTATATATAAGTTGTTAAAAAGAGAGAGAGATCACATATGGAGATGAAAAACAAGGTTGCTTTGGTGACCATGGTGGTTGTGATGATGGTTATGGCTCGGTCGGCGACCGTCACCGCTGCCATGGATGAGGCGATTGAACTCCCAGCCAATGATGAAGCGAGTTATTACGATACGCCTCCGCCTCCTCGTGTTTGTCCTATTATGATATTACCATGCAAAACTGATTCTGAGTGTTCTCCATGCTATTGTGTTAATGGCTCCTGCATTTGACAAGCAAAATGAGAAGGAAAAAGAACAAGAAGAATAAAGTTTGTTATTAGTATTGATGTTTCATTTGTGTTTTTTTTTTTTTTCCTTTTTTTTCTCTAAGTTTAATGCAGAATAAACCTTTGCTTCTTTTTGCCCTTCAGCTTGTTGAAGTGCAAAATAATCCATTACTTTTATGTCAGTGTTGATTATTATTGTTTTTTATTTAGTTTTCTAACAATAAACTACTACAAATTTGACTTTCA

mRNA sequence

ATTAATTCTCTTGTTTTTTTCAGCTATAAATACAAGGCATGGGAAAGCCAATAGAAACCATTATATATAAGTTGTTAAAAAGAGAGAGAGATCACATATGGAGATGAAAAACAAGGTTGCTTTGGTGACCATGGTGGTTGTGATGATGGTTATGGCTCGGTCGGCGACCGTCACCGCTGCCATGGATGAGGCGATTGAACTCCCAGCCAATGATGAAGCGAGTTATTACGATACGCCTCCGCCTCCTCGTGTTTGTCCTATTATGATATTACCATGCAAAACTGATTCTGAGTGTTCTCCATGCTATTGTGTTAATGGCTCCTGCATTTGACAAGCAAAATGAGAAGGAAAAAGAACAAGAAGAATAAAGTTTGTTATTAGTATTGATGTTTCATTTGTGTTTTTTTTTTTTTTCCTTTTTTTTCTCTAAGTTTAATGCAGAATAAACCTTTGCTTCTTTTTGCCCTTCAGCTTGTTGAAGTGCAAAATAATCCATTACTTTTATGTCAGTGTTGATTATTATTGTTTTTTATTTAGTTTTCTAACAATAAACTACTACAAATTTGACTTTCA

Coding sequence (CDS)

ATGGAGATGAAAAACAAGGTTGCTTTGGTGACCATGGTGGTTGTGATGATGGTTATGGCTCGGTCGGCGACCGTCACCGCTGCCATGGATGAGGCGATTGAACTCCCAGCCAATGATGAAGCGAGTTATTACGATACGCCTCCGCCTCCTCGTGTTTGTCCTATTATGATATTACCATGCAAAACTGATTCTGAGTGTTCTCCATGCTATTGTGTTAATGGCTCCTGCATTTGA

Protein sequence

MEMKNKVALVTMVVVMMVMARSATVTAAMDEAIELPANDEASYYDTPPPPRVCPIMILPCKTDSECSPCYCVNGSCI

Homology

[Close]

BLAST of PI0011785 vs. ExPASy TrEMBL
Match: A0A0A0KY39 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G000850 PE=4 SV=1)

HSP 1 Score: 138.3 bits (347), Expect = 1.4e-29
Identity = 70/77 (90.91%), Postives = 71/77 (92.21%), Query Frame = 0


Query: 1  MEMKNKVALVTMVVVMMVMARSATVTAAMDEAIELPANDEASYYDTPPPPRVCPIMILPC 60
          MEMKNKVALV MVVVM+VM RSATVTAAMDE IELP N EASYYDTPPPPRVCPIMILPC
Sbjct: 1  MEMKNKVALVAMVVVMVVMTRSATVTAAMDEGIELPTNGEASYYDTPPPPRVCPIMILPC 60

Query: 61 KTDSECSPCYCVNGSCI 78
          KTDSECSPCYC NGSCI
Sbjct: 61 KTDSECSPCYCNNGSCI 77

[Close]

BLAST of PI0011785 vs. ExPASy TrEMBL
Match: A0A5A7TRY5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold46G00670 PE=4 SV=1)

HSP 1 Score: 72.8 bits (177), Expect = 7.1e-10
Identity = 46/79 (58.23%), Postives = 51/79 (64.56%), Query Frame = 0


Query: 1  MEMKNKVALVTMVVVMMVMARSATVTAAMDEAIELPANDEASYYDTPPPPRVCPIMILPC 60
          MEMKNK ALV MVV M+VMA+S T T   DE IEL   +  +        RVCP  ILPC
Sbjct: 1  MEMKNKAALVAMVVFMVVMAQSVT-TITADETIELSGGENTA--------RVCPATILPC 60

Query: 61 KTDSECSPCYC--VNGSCI 78
          KTDSECSPC C   +GSCI
Sbjct: 61 KTDSECSPCICNLQSGSCI 70

[Close]

BLAST of PI0011785 vs. ExPASy TrEMBL
Match: A0A5D3E1Q5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold655G00670 PE=4 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 1.6e-09
Identity = 45/79 (56.96%), Postives = 51/79 (64.56%), Query Frame = 0


Query: 1  MEMKNKVALVTMVVVMMVMARSATVTAAMDEAIELPANDEASYYDTPPPPRVCPIMILPC 60
          MEMKNK ALV MVV M+VMA+S T T   DE IE+   +  +        RVCP  ILPC
Sbjct: 1  MEMKNKAALVAMVVFMVVMAQSVT-TITADETIEVSGGENTA--------RVCPATILPC 60

Query: 61 KTDSECSPCYC--VNGSCI 78
          KTDSECSPC C   +GSCI
Sbjct: 61 KTDSECSPCICNLQSGSCI 70

[Close]

BLAST of PI0011785 vs. ExPASy TrEMBL
Match: A0A0A0KWE9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G000860 PE=4 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 1.0e-08
Identity = 42/79 (53.16%), Postives = 51/79 (64.56%), Query Frame = 0


Query: 1  MEMKNKVALVTMVVVMMVMARSATVTAAMDEAIELPANDEASYYDTPPPPRVCPIMILPC 60
          MEMKNK ALV MVV M+VMA+S T T   DE IEL   +  +        RVCP  +LPC
Sbjct: 1  MEMKNKAALVAMVVFMVVMAQSVT-TITADETIELSGGENTA--------RVCPATLLPC 60

Query: 61 KTDSECSPCYC--VNGSCI 78
          +TDSECSPC C   +G+C+
Sbjct: 61 ETDSECSPCICNVKSGACV 70

[Close]

BLAST of PI0011785 vs. NCBI nr
Match: KGN52766.1 (hypothetical protein Csa_015422 [Cucumis sativus])

HSP 1 Score: 138.3 bits (347), Expect = 2.8e-29
Identity = 70/77 (90.91%), Postives = 71/77 (92.21%), Query Frame = 0


Query: 1  MEMKNKVALVTMVVVMMVMARSATVTAAMDEAIELPANDEASYYDTPPPPRVCPIMILPC 60
          MEMKNKVALV MVVVM+VM RSATVTAAMDE IELP N EASYYDTPPPPRVCPIMILPC
Sbjct: 1  MEMKNKVALVAMVVVMVVMTRSATVTAAMDEGIELPTNGEASYYDTPPPPRVCPIMILPC 60

Query: 61 KTDSECSPCYCVNGSCI 78
          KTDSECSPCYC NGSCI
Sbjct: 61 KTDSECSPCYCNNGSCI 77

[Close]

BLAST of PI0011785 vs. NCBI nr
Match: KAA0044341.1 (hypothetical protein E6C27_scaffold46G00670 [Cucumis melo var. makuwa])

HSP 1 Score: 72.8 bits (177), Expect = 1.5e-09
Identity = 46/79 (58.23%), Postives = 51/79 (64.56%), Query Frame = 0


Query: 1  MEMKNKVALVTMVVVMMVMARSATVTAAMDEAIELPANDEASYYDTPPPPRVCPIMILPC 60
          MEMKNK ALV MVV M+VMA+S T T   DE IEL   +  +        RVCP  ILPC
Sbjct: 1  MEMKNKAALVAMVVFMVVMAQSVT-TITADETIELSGGENTA--------RVCPATILPC 60

Query: 61 KTDSECSPCYC--VNGSCI 78
          KTDSECSPC C   +GSCI
Sbjct: 61 KTDSECSPCICNLQSGSCI 70

[Close]

BLAST of PI0011785 vs. NCBI nr
Match: TYK29470.1 (hypothetical protein E5676_scaffold655G00670 [Cucumis melo var. makuwa])

HSP 1 Score: 71.6 bits (174), Expect = 3.3e-09
Identity = 45/79 (56.96%), Postives = 51/79 (64.56%), Query Frame = 0


Query: 1  MEMKNKVALVTMVVVMMVMARSATVTAAMDEAIELPANDEASYYDTPPPPRVCPIMILPC 60
          MEMKNK ALV MVV M+VMA+S T T   DE IE+   +  +        RVCP  ILPC
Sbjct: 1  MEMKNKAALVAMVVFMVVMAQSVT-TITADETIEVSGGENTA--------RVCPATILPC 60

Query: 61 KTDSECSPCYC--VNGSCI 78
          KTDSECSPC C   +GSCI
Sbjct: 61 KTDSECSPCICNLQSGSCI 70

[Close]

BLAST of PI0011785 vs. NCBI nr
Match: KGN52767.1 (hypothetical protein Csa_015168 [Cucumis sativus])

HSP 1 Score: 68.9 bits (167), Expect = 2.1e-08
Identity = 42/79 (53.16%), Postives = 51/79 (64.56%), Query Frame = 0


Query: 1  MEMKNKVALVTMVVVMMVMARSATVTAAMDEAIELPANDEASYYDTPPPPRVCPIMILPC 60
          MEMKNK ALV MVV M+VMA+S T T   DE IEL   +  +        RVCP  +LPC
Sbjct: 1  MEMKNKAALVAMVVFMVVMAQSVT-TITADETIELSGGENTA--------RVCPATLLPC 60

Query: 61 KTDSECSPCYC--VNGSCI 78
          +TDSECSPC C   +G+C+
Sbjct: 61 ETDSECSPCICNVKSGACV 70

The following BLAST results are available for this feature:

BLAST of PI0011785 vs.


Match Name	E-value	Identity	Description

BLAST of PI0011785 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KY39	1.4e-29	90.91	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G000850 PE=4 SV=1	[more]
A0A5A7TRY5	7.1e-10	58.23	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5D3E1Q5	1.6e-09	56.96	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A0A0KWE9	1.0e-08	53.16	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G000860 PE=4 SV=1	[more]

BLAST of PI0011785 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN52766.1	2.8e-29	90.91	hypothetical protein Csa_015422 [Cucumis sativus]	[more]
KAA0044341.1	1.5e-09	58.23	hypothetical protein E6C27_scaffold46G00670 [Cucumis melo var. makuwa]	[more]
TYK29470.1	3.3e-09	56.96	hypothetical protein E5676_scaffold655G00670 [Cucumis melo var. makuwa]	[more]
KGN52767.1	2.1e-08	53.16	hypothetical protein Csa_015168 [Cucumis sativus]	[more]

BLAST of PI0011785 vs. NCBI nr


Match Name	E-value	Identity	Description

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0011785.1	PI0011785.1	mRNA