PI0011689 (gene) Melon (PI 482460) v1

Overview
NamePI0011689
Typegene
OrganismCucumis metuliferus (Melon (PI 482460) v1)
DescriptionDefensin-like protein 3
Locationchr01: 7189526 .. 7189861 (-)
RNA-Seq ExpressionPI0011689
SyntenyPI0011689
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGGGTAGAAGGATGGAGAAAGCTCACAGTTGTGTTGTTCATCTTGTTATCCCTTGCTTCTGGTAATGAGAGATGCTGGTGCTGGTTGTTTAAATTTTGTATGCATTGTTACAAAAATAATGAAAATTAAATAAATAGAGTAATGATGGAAGGTGTGTATTTGTGTTTGTGTTGTTGCTTCTTTACAGGTTGGATGGTGGCGGAGACGGAAGGAAGGGTTTGCTACAGGGCGAACCCAACGTCCGAGGGACTGTGTAGTTCGGACCAAGAATGTGTTGCAGTTTGCGATGGATTTTGCACCCTTGGAAAGTGCATTTGTGCTGTCCCTTGCTGA

mRNA sequence

ATGGGGGTAGAAGGATGGAGAAAGCTCACAGTTGTGTTGTTCATCTTGTTATCCCTTGCTTCTGGTTGGATGGTGGCGGAGACGGAAGGAAGGGTTTGCTACAGGGCGAACCCAACGTCCGAGGGACTGTGTAGTTCGGACCAAGAATGTGTTGCAGTTTGCGATGGATTTTGCACCCTTGGAAAGTGCATTTGTGCTGTCCCTTGCTGA

Coding sequence (CDS)

ATGGGGGTAGAAGGATGGAGAAAGCTCACAGTTGTGTTGTTCATCTTGTTATCCCTTGCTTCTGGTTGGATGGTGGCGGAGACGGAAGGAAGGGTTTGCTACAGGGCGAACCCAACGTCCGAGGGACTGTGTAGTTCGGACCAAGAATGTGTTGCAGTTTGCGATGGATTTTGCACCCTTGGAAAGTGCATTTGTGCTGTCCCTTGCTGA

Protein sequence

MGVEGWRKLTVVLFILLSLASGWMVAETEGRVCYRANPTSEGLCSSDQECVAVCDGFCTLGKCICAVPC
Homology
BLAST of PI0011689 vs. ExPASy TrEMBL
Match: A0A5D3BEY4 (Defensin-like protein 3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold986G00520 PE=4 SV=1)

HSP 1 Score: 119.8 bits (299), Expect = 4.5e-24
Identity = 54/69 (78.26%), Postives = 63/69 (91.30%), Query Frame = 0

Query: 1  MGVEGWRKLTVVLFILLSLASGWMVAETEGRVCYRANPTSEGLCSSDQECVAVCDGFCTL 60
          MG EG RKLTVVL ILLS+ASGWMVAETEGRVC+R  PT +G+CSSD++C+AVCDGFC+L
Sbjct: 1  MGEEGRRKLTVVLVILLSVASGWMVAETEGRVCFRPRPTLKGVCSSDEDCIAVCDGFCSL 60

Query: 61 GKCICAVPC 70
          GKC+CAVPC
Sbjct: 61 GKCMCAVPC 69

BLAST of PI0011689 vs. ExPASy TrEMBL
Match: W5RQN1 (Defensin-like protein 3 OS=Citrullus lanatus OX=3654 GN=PDF2.3 PE=2 SV=1)

HSP 1 Score: 113.2 bits (282), Expect = 4.3e-22
Identity = 49/68 (72.06%), Postives = 56/68 (82.35%), Query Frame = 0

Query: 2  GVEGWRKLTVVLFILLSLASGWMVAETEGRVCYRANPTSEGLCSSDQECVAVCDGFCTLG 61
          G E WRKLT+VLFI LSLASGWMVAETEGR CYR +P+ +G CSSD++C+ VCDGFC  G
Sbjct: 3  GSEEWRKLTIVLFIFLSLASGWMVAETEGRACYRPSPSFKGRCSSDEDCIGVCDGFCNHG 62

Query: 62 KCICAVPC 70
           CIC VPC
Sbjct: 63 SCICTVPC 70

BLAST of PI0011689 vs. ExPASy TrEMBL
Match: A0A5D3BCI9 (Defensin-like protein 3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold986G00530 PE=4 SV=1)

HSP 1 Score: 80.9 bits (198), Expect = 2.3e-12
Identity = 35/70 (50.00%), Postives = 49/70 (70.00%), Query Frame = 0

Query: 6  WRKLTVVLFILLSLASGWMVAETEGRVCYRANPTSEGLCSSDQECVAVCD------GFCT 65
          W+KLT V F+ LS+ASGWM+ ETEG++C++ +P+ +G C+S+ ECV  CD      G C+
Sbjct: 5  WKKLTFVAFVFLSIASGWMMEETEGKICFKQSPSFKGKCTSNDECVKACDIDMWYNGVCS 64

Query: 66 LGKCICAVPC 70
           G CIC V C
Sbjct: 65 NGLCICTVIC 74

BLAST of PI0011689 vs. ExPASy TrEMBL
Match: A0A5A7V3H5 (Defensin-like protein 3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold986G00550 PE=4 SV=1)

HSP 1 Score: 77.4 bits (189), Expect = 2.6e-11
Identity = 39/76 (51.32%), Postives = 47/76 (61.84%), Query Frame = 0

Query: 1  MGVEGWRKLTVVLFILLSLASGWMVAETEGRVCYRANPTSEGLCSSDQECVAVC------ 60
          MG EG RKLTVV+ I L  ASGWMV +TEG  CY+ +   +G C+S +EC  VC      
Sbjct: 1  MGGEGLRKLTVVVLIFLVFASGWMVVQTEGLTCYKPSTAFQGTCNSAEECGRVCFYQEGW 60

Query: 61 -DGFCTLGKCICAVPC 70
           DGFC+  KCIC   C
Sbjct: 61 DDGFCSGDKCICTEKC 76

BLAST of PI0011689 vs. ExPASy TrEMBL
Match: A0A0A0K447 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G239060 PE=4 SV=1)

HSP 1 Score: 75.5 bits (184), Expect = 9.8e-11
Identity = 36/72 (50.00%), Postives = 49/72 (68.06%), Query Frame = 0

Query: 5  GWRKLTVVLFI-LLSLASGWMVAETEGRVCYRANPTSEGLCSSDQECVAVC------DGF 64
          GW+KLT V FI LL++ASGWM+ ET G++C++ + + +G C S+ ECV  C      DGF
Sbjct: 4  GWKKLTFVAFIFLLAIASGWMMVETAGKICFKQSRSFKGKCISNDECVKACDTDMWYDGF 63

Query: 65 CTLGKCICAVPC 70
          C+ G CIC V C
Sbjct: 64 CSNGLCICTVIC 75

BLAST of PI0011689 vs. NCBI nr
Match: KAA0062795.1 (defensin-like protein 3 [Cucumis melo var. makuwa] >TYJ96758.1 defensin-like protein 3 [Cucumis melo var. makuwa])

HSP 1 Score: 119.8 bits (299), Expect = 9.4e-24
Identity = 54/69 (78.26%), Postives = 63/69 (91.30%), Query Frame = 0

Query: 1  MGVEGWRKLTVVLFILLSLASGWMVAETEGRVCYRANPTSEGLCSSDQECVAVCDGFCTL 60
          MG EG RKLTVVL ILLS+ASGWMVAETEGRVC+R  PT +G+CSSD++C+AVCDGFC+L
Sbjct: 1  MGEEGRRKLTVVLVILLSVASGWMVAETEGRVCFRPRPTLKGVCSSDEDCIAVCDGFCSL 60

Query: 61 GKCICAVPC 70
          GKC+CAVPC
Sbjct: 61 GKCMCAVPC 69

BLAST of PI0011689 vs. NCBI nr
Match: XP_031744629.1 (defensin-1-like [Cucumis sativus])

HSP 1 Score: 118.2 bits (295), Expect = 2.7e-23
Identity = 52/66 (78.79%), Postives = 60/66 (90.91%), Query Frame = 0

Query: 4  EGWRKLTVVLFILLSLASGWMVAETEGRVCYRANPTSEGLCSSDQECVAVCDGFCTLGKC 63
          EGWRKLTVVLFILLSLASGWMVAETEGRVCYR +P  +G+CSS+ +C+AVCDGFC+ GKC
Sbjct: 4  EGWRKLTVVLFILLSLASGWMVAETEGRVCYRPSPRLKGVCSSNDDCIAVCDGFCSHGKC 63

Query: 64 ICAVPC 70
          +C VPC
Sbjct: 64 MCEVPC 69

BLAST of PI0011689 vs. NCBI nr
Match: AHA50469.1 (defensin-like protein 3 [Citrullus lanatus])

HSP 1 Score: 113.2 bits (282), Expect = 8.8e-22
Identity = 49/68 (72.06%), Postives = 56/68 (82.35%), Query Frame = 0

Query: 2  GVEGWRKLTVVLFILLSLASGWMVAETEGRVCYRANPTSEGLCSSDQECVAVCDGFCTLG 61
          G E WRKLT+VLFI LSLASGWMVAETEGR CYR +P+ +G CSSD++C+ VCDGFC  G
Sbjct: 3  GSEEWRKLTIVLFIFLSLASGWMVAETEGRACYRPSPSFKGRCSSDEDCIGVCDGFCNHG 62

Query: 62 KCICAVPC 70
           CIC VPC
Sbjct: 63 SCICTVPC 70

BLAST of PI0011689 vs. NCBI nr
Match: XP_038887289.1 (defensin-like protein 2 [Benincasa hispida])

HSP 1 Score: 94.7 bits (234), Expect = 3.2e-16
Identity = 44/75 (58.67%), Postives = 54/75 (72.00%), Query Frame = 0

Query: 1  MGVEGWRKLTVVLFILLSLASGWMVAETEGRVCYRANPTSEGLCSSDQECVAVCD----- 60
          M  EGWRKLTVVLFI L+LASGWMV ETEG+ C++ +P+  G C+S+ ECV  CD     
Sbjct: 1  MAGEGWRKLTVVLFIFLALASGWMVVETEGKTCFKQSPSFRGQCTSNNECVGACDNDMWY 60

Query: 61 -GFCTLGKCICAVPC 70
           G+C+ G CICAV C
Sbjct: 61 NGYCSNGLCICAVHC 75

BLAST of PI0011689 vs. NCBI nr
Match: KAE8646110.1 (hypothetical protein Csa_016182 [Cucumis sativus])

HSP 1 Score: 81.6 bits (200), Expect = 2.8e-12
Identity = 39/76 (51.32%), Postives = 48/76 (63.16%), Query Frame = 0

Query: 1  MGVEGWRKLTVVLFILLSLASGWMVAETEGRVCYRANPTSEGLCSSDQECVAVC------ 60
          MG EG RKLTVV+ I L+ ASGWMV +TEG  CYR +   +G C++ QEC  VC      
Sbjct: 1  MGGEGLRKLTVVVLIFLAFASGWMVVQTEGLTCYRPSTVFQGTCNTAQECAIVCFYQEGW 60

Query: 61 -DGFCTLGKCICAVPC 70
           DGFC+  KC+C   C
Sbjct: 61 DDGFCSADKCVCTKQC 76

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5D3BEY44.5e-2478.26Defensin-like protein 3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
W5RQN14.3e-2272.06Defensin-like protein 3 OS=Citrullus lanatus OX=3654 GN=PDF2.3 PE=2 SV=1[more]
A0A5D3BCI92.3e-1250.00Defensin-like protein 3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5A7V3H52.6e-1151.32Defensin-like protein 3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A0A0K4479.8e-1150.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G239060 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
KAA0062795.19.4e-2478.26defensin-like protein 3 [Cucumis melo var. makuwa] >TYJ96758.1 defensin-like pro... [more]
XP_031744629.12.7e-2378.79defensin-1-like [Cucumis sativus][more]
AHA50469.18.8e-2272.06defensin-like protein 3 [Citrullus lanatus][more]
XP_038887289.13.2e-1658.67defensin-like protein 2 [Benincasa hispida][more]
KAE8646110.12.8e-1251.32hypothetical protein Csa_016182 [Cucumis sativus][more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
PI0011689.1PI0011689.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006952 defense response