PI0011522 (gene) Melon (PI 482460) v1

Overview


Name	PI0011522
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Transposase
Location	chr01: 18121691 .. 18122455 (-)
RNA-Seq Expression	PI0011522
Synteny	PI0011522

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCTGGGGCCGCATGGGAAGTAACGCAACGGGGAAGTATCAGTTGTATCCACATCAGCTAACCACTGAGGCGAGCGTGTGGTTGTTTTTTATCAAGAAGAAGATTTTCCCAACGCGCCATGATAGCACCATCAACTTAGAGTCAACAATGCTACTCTATTGTATCTTGGCGAAGAAGCGCGTCAACCTTGGCGATCTTATAGCCACATCCATTCTATCCTGGATGCGAGCTCCCAAAGGCGTCATGCCCTTCCCTTCTACCATTAAGGCCCTTTGCCTTAAAGCTGTGTCATTCTTATCCGCCATCCAAAAAATTCCAATACCAGGCGGGCTGTGTAATCAAATGGCTTTAAACCGCATGATTATTTCCATGGACACAAGGAAATGGAAAGGCGCGCAAAGACATTGGGCGACACACTTGAAGGAAATCCCCAGTCGTCGCATCAACCCCCCACCTAAAGCCAAAAAAGCAAAGGTTGATGTGGTGAAGCAGCCTCCACTGAAAATTATCCACCCCTCATCCCGCCCAAAACAGCAAGCTCCCAATCAGTCCAACAGAAATCCAGCAGCTCTTAACCTCCCCGCTCTTCTTCGCCCATCCAATCACCCACACCTTTGCCAAACCTCTCTCCCCGCCATTCACCTCTCCGCCACATTCTTCCCCTATCAACGTCCCTCACCTTTCCCCCCAACCGCCTACCCGTCCGCCCACAAAATCTACTTCACCCTTTCCTTCCAAATTACCTTCACCTTGCCGATCTGA

mRNA sequence

ATGGCCTGGGGCCGCATGGGAAGTAACGCAACGGGGAAGTATCAGTTGTATCCACATCAGCTAACCACTGAGGCGAGCGTGTGGTTGTTTTTTATCAAGAAGAAGATTTTCCCAACGCGCCATGATAGCACCATCAACTTAGAGTCAACAATGCTACTCTATTGTATCTTGGCGAAGAAGCGCGTCAACCTTGGCGATCTTATAGCCACATCCATTCTATCCTGGATGCGAGCTCCCAAAGGCGTCATGCCCTTCCCTTCTACCATTAAGGCCCTTTGCCTTAAAGCTGTGTCATTCTTATCCGCCATCCAAAAAATTCCAATACCAGGCGGGCTGTGTAATCAAATGGCTTTAAACCGCATGATTATTTCCATGGACACAAGGAAATGGAAAGGCGCGCAAAGACATTGGGCGACACACTTGAAGGAAATCCCCAGTCGTCGCATCAACCCCCCACCTAAAGCCAAAAAAGCAAAGGTTGATGTGGTGAAGCAGCCTCCACTGAAAATTATCCACCCCTCATCCCGCCCAAAACAGCAAGCTCCCAATCAGTCCAACAGAAATCCAGCAGCTCTTAACCTCCCCGCTCTTCTTCGCCCATCCAATCACCCACACCTTTGCCAAACCTCTCTCCCCGCCATTCACCTCTCCGCCACATTCTTCCCCTATCAACGTCCCTCACCTTTCCCCCCAACCGCCTACCCGTCCGCCCACAAAATCTACTTCACCCTTTCCTTCCAAATTACCTTCACCTTGCCGATCTGA

Coding sequence (CDS)

ATGGCCTGGGGCCGCATGGGAAGTAACGCAACGGGGAAGTATCAGTTGTATCCACATCAGCTAACCACTGAGGCGAGCGTGTGGTTGTTTTTTATCAAGAAGAAGATTTTCCCAACGCGCCATGATAGCACCATCAACTTAGAGTCAACAATGCTACTCTATTGTATCTTGGCGAAGAAGCGCGTCAACCTTGGCGATCTTATAGCCACATCCATTCTATCCTGGATGCGAGCTCCCAAAGGCGTCATGCCCTTCCCTTCTACCATTAAGGCCCTTTGCCTTAAAGCTGTGTCATTCTTATCCGCCATCCAAAAAATTCCAATACCAGGCGGGCTGTGTAATCAAATGGCTTTAAACCGCATGATTATTTCCATGGACACAAGGAAATGGAAAGGCGCGCAAAGACATTGGGCGACACACTTGAAGGAAATCCCCAGTCGTCGCATCAACCCCCCACCTAAAGCCAAAAAAGCAAAGGTTGATGTGGTGAAGCAGCCTCCACTGAAAATTATCCACCCCTCATCCCGCCCAAAACAGCAAGCTCCCAATCAGTCCAACAGAAATCCAGCAGCTCTTAACCTCCCCGCTCTTCTTCGCCCATCCAATCACCCACACCTTTGCCAAACCTCTCTCCCCGCCATTCACCTCTCCGCCACATTCTTCCCCTATCAACGTCCCTCACCTTTCCCCCCAACCGCCTACCCGTCCGCCCACAAAATCTACTTCACCCTTTCCTTCCAAATTACCTTCACCTTGCCGATCTGA

Protein sequence

MAWGRMGSNATGKYQLYPHQLTTEASVWLFFIKKKIFPTRHDSTINLESTMLLYCILAKKRVNLGDLIATSILSWMRAPKGVMPFPSTIKALCLKAVSFLSAIQKIPIPGGLCNQMALNRMIISMDTRKWKGAQRHWATHLKEIPSRRINPPPKAKKAKVDVVKQPPLKIIHPSSRPKQQAPNQSNRNPAALNLPALLRPSNHPHLCQTSLPAIHLSATFFPYQRPSPFPPTAYPSAHKIYFTLSFQITFTLPI

Homology

[Close]

BLAST of PI0011522 vs. ExPASy TrEMBL
Match: A0A5A7U806 (Transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold163G00620 PE=4 SV=1)

HSP 1 Score: 122.5 bits (306), Expect = 2.6e-24
Identity = 62/108 (57.41%), Postives = 75/108 (69.44%), Query Frame = 0


Query: 8    SNATGKYQLYPHQLTTEASVWLFFIKKKIFPTRHDSTINLESTMLLYCILAKKRVNLGDL 67
            S  T + QL+PHQLT EA+VWLFFIKKKIFPT HDSTI  E  ++LYCI AKK  NLG +
Sbjct: 1282 STPTRRLQLFPHQLTIEANVWLFFIKKKIFPTHHDSTILTEYALVLYCINAKKPFNLGYV 1341

Query: 68   IATSILSWMRAPKGVMPFPSTIKALCLKAV-SFLSAIQKIPIPGGLCN 115
            +  + LSWMR PK   PFP+T+K LCLK +      I +I + GG CN
Sbjct: 1342 MNEAFLSWMRNPKNAKPFPTTVKKLCLKYLDEEPREIPQIDMVGGKCN 1389

[Close]

BLAST of PI0011522 vs. ExPASy TrEMBL
Match: A0A5D3CVL7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold94G00870 PE=4 SV=1)

HSP 1 Score: 122.5 bits (306), Expect = 2.6e-24
Identity = 62/108 (57.41%), Postives = 75/108 (69.44%), Query Frame = 0


Query: 8   SNATGKYQLYPHQLTTEASVWLFFIKKKIFPTRHDSTINLESTMLLYCILAKKRVNLGDL 67
           S  T + QL+PHQLT EA+VWLFFIKKKIFPT HDSTI  E  ++LYCI AKK  NLG +
Sbjct: 121 STPTRRLQLFPHQLTIEANVWLFFIKKKIFPTHHDSTILTEYALVLYCINAKKPFNLGYV 180

Query: 68  IATSILSWMRAPKGVMPFPSTIKALCLKAV-SFLSAIQKIPIPGGLCN 115
           +  + LSWMR PK   PFP+T+K LCLK +      I +I + GG CN
Sbjct: 181 MNEAFLSWMRNPKNAKPFPTTVKKLCLKYLDEEPREIPQIDMVGGKCN 228

[Close]

BLAST of PI0011522 vs. ExPASy TrEMBL
Match: A0A5A7V6M5 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold683G00020 PE=4 SV=1)

HSP 1 Score: 112.5 bits (280), Expect = 2.7e-21
Identity = 52/95 (54.74%), Postives = 73/95 (76.84%), Query Frame = 0


Query: 13  KYQLYPHQLTTEASVWLFFIKKKIFPTRHDSTINLESTMLLYCILAKKRVNLGDLIATSI 72
           +YQLYPH LTT+A+VW+FF K KIFPT +DSTI+++ T++LYCI+ KK +NL ++I  +I
Sbjct: 85  RYQLYPH-LTTKANVWMFFTKNKIFPTCYDSTISMDYTVILYCIMIKKAINLDEIIKAAI 144

Query: 73  LSWMRAPKGVMPFPSTIKALCLKAVSFLSAIQKIP 108
           L+WM  PK  MPFPS ++ LCLK   FL ++ + P
Sbjct: 145 LTWMEIPKEAMPFPSLMEKLCLK---FLPSLVRYP 175

[Close]

BLAST of PI0011522 vs. ExPASy TrEMBL
Match: A0A5D3DVQ6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1142G00370 PE=4 SV=1)

HSP 1 Score: 111.3 bits (277), Expect = 5.9e-21
Identity = 55/117 (47.01%), Postives = 78/117 (66.67%), Query Frame = 0


Query: 1   MAWGRMGSNATG--KYQLYPHQLTTEASVWLFFIKKKIFPTRHDSTINLESTMLLYCILA 60
           +AW R   + T   KY+L+ H LTTEASVWL FIKKK+ PTRHD+TI+ E  MLLYCI+ 
Sbjct: 173 VAWARKKWDVTSIKKYRLFLHNLTTEASVWLVFIKKKLMPTRHDNTISFERIMLLYCIME 232

Query: 61  KKRVNLGDLIATSILSWMRAPKGVMPFPSTIKALCLKAVSFLSAIQKIP-IPGGLCN 115
           +  V++ ++I   I +W++ P+G  PFP  I+ LCL++ S L    +I  +  G+CN
Sbjct: 233 EIPVDVDEIICDHIKAWVQHPRGAKPFPHLIERLCLRSCSELEQSPQIACVQDGMCN 289

[Close]

BLAST of PI0011522 vs. ExPASy TrEMBL
Match: A0A5A7UUR1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold279G00010 PE=4 SV=1)

HSP 1 Score: 100.9 bits (250), Expect = 8.0e-18
Identity = 57/122 (46.72%), Postives = 73/122 (59.84%), Query Frame = 0


Query: 38  PTRHDSTINLESTMLLYCILAKKRVNLGDLIATSILSWMRAPKGVMPFPSTIKALCLKAV 97
           PTRHD+TI LE  M++YCI  K  VNLG +I  SILS M APK +MPFP TIKALCLKAV
Sbjct: 2   PTRHDNTIPLEYAMMIYCIKKKMVVNLGAIIRNSILSLMEAPKDIMPFPFTIKALCLKAV 61

Query: 98  SFLSAIQKIPIPGGLCNQMALNRMIISMDTRKWKGAQRHWATHLKEIPSRRINPPPKAKK 157
             LS   + PI  G+C Q  LN+ I+    ++ +   +     +K       +PPP  K+
Sbjct: 62  PELSTFLQAPISDGVCFQATLNQTIMLHQNKEEERCIK-TLNKVKGEEEEASSPPPPLKR 121

Query: 158 AK 160
            K
Sbjct: 122 KK 122

[Close]

BLAST of PI0011522 vs. NCBI nr
Match: KAA0049609.1 (transposase [Cucumis melo var. makuwa])

HSP 1 Score: 122.5 bits (306), Expect = 5.3e-24
Identity = 62/108 (57.41%), Postives = 75/108 (69.44%), Query Frame = 0


Query: 8    SNATGKYQLYPHQLTTEASVWLFFIKKKIFPTRHDSTINLESTMLLYCILAKKRVNLGDL 67
            S  T + QL+PHQLT EA+VWLFFIKKKIFPT HDSTI  E  ++LYCI AKK  NLG +
Sbjct: 1282 STPTRRLQLFPHQLTIEANVWLFFIKKKIFPTHHDSTILTEYALVLYCINAKKPFNLGYV 1341

Query: 68   IATSILSWMRAPKGVMPFPSTIKALCLKAV-SFLSAIQKIPIPGGLCN 115
            +  + LSWMR PK   PFP+T+K LCLK +      I +I + GG CN
Sbjct: 1342 MNEAFLSWMRNPKNAKPFPTTVKKLCLKYLDEEPREIPQIDMVGGKCN 1389

[Close]

BLAST of PI0011522 vs. NCBI nr
Match: TYK15967.1 (hypothetical protein E5676_scaffold94G00870 [Cucumis melo var. makuwa])

HSP 1 Score: 122.5 bits (306), Expect = 5.3e-24
Identity = 62/108 (57.41%), Postives = 75/108 (69.44%), Query Frame = 0


Query: 8   SNATGKYQLYPHQLTTEASVWLFFIKKKIFPTRHDSTINLESTMLLYCILAKKRVNLGDL 67
           S  T + QL+PHQLT EA+VWLFFIKKKIFPT HDSTI  E  ++LYCI AKK  NLG +
Sbjct: 121 STPTRRLQLFPHQLTIEANVWLFFIKKKIFPTHHDSTILTEYALVLYCINAKKPFNLGYV 180

Query: 68  IATSILSWMRAPKGVMPFPSTIKALCLKAV-SFLSAIQKIPIPGGLCN 115
           +  + LSWMR PK   PFP+T+K LCLK +      I +I + GG CN
Sbjct: 181 MNEAFLSWMRNPKNAKPFPTTVKKLCLKYLDEEPREIPQIDMVGGKCN 228

[Close]

BLAST of PI0011522 vs. NCBI nr
Match: KAA0062900.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 112.5 bits (280), Expect = 5.5e-21
Identity = 52/95 (54.74%), Postives = 73/95 (76.84%), Query Frame = 0


Query: 13  KYQLYPHQLTTEASVWLFFIKKKIFPTRHDSTINLESTMLLYCILAKKRVNLGDLIATSI 72
           +YQLYPH LTT+A+VW+FF K KIFPT +DSTI+++ T++LYCI+ KK +NL ++I  +I
Sbjct: 85  RYQLYPH-LTTKANVWMFFTKNKIFPTCYDSTISMDYTVILYCIMIKKAINLDEIIKAAI 144

Query: 73  LSWMRAPKGVMPFPSTIKALCLKAVSFLSAIQKIP 108
           L+WM  PK  MPFPS ++ LCLK   FL ++ + P
Sbjct: 145 LTWMEIPKEAMPFPSLMEKLCLK---FLPSLVRYP 175

[Close]

BLAST of PI0011522 vs. NCBI nr
Match: KAA0054837.1 (hypothetical protein E6C27_scaffold406G00150 [Cucumis melo var. makuwa] >TYK27771.1 hypothetical protein E5676_scaffold1142G00370 [Cucumis melo var. makuwa])

HSP 1 Score: 111.3 bits (277), Expect = 1.2e-20
Identity = 55/117 (47.01%), Postives = 78/117 (66.67%), Query Frame = 0


Query: 1   MAWGRMGSNATG--KYQLYPHQLTTEASVWLFFIKKKIFPTRHDSTINLESTMLLYCILA 60
           +AW R   + T   KY+L+ H LTTEASVWL FIKKK+ PTRHD+TI+ E  MLLYCI+ 
Sbjct: 173 VAWARKKWDVTSIKKYRLFLHNLTTEASVWLVFIKKKLMPTRHDNTISFERIMLLYCIME 232

Query: 61  KKRVNLGDLIATSILSWMRAPKGVMPFPSTIKALCLKAVSFLSAIQKIP-IPGGLCN 115
           +  V++ ++I   I +W++ P+G  PFP  I+ LCL++ S L    +I  +  G+CN
Sbjct: 233 EIPVDVDEIICDHIKAWVQHPRGAKPFPHLIERLCLRSCSELEQSPQIACVQDGMCN 289

[Close]

BLAST of PI0011522 vs. NCBI nr
Match: KAA0057279.1 (hypothetical protein E6C27_scaffold280G001200 [Cucumis melo var. makuwa] >TYK27636.1 hypothetical protein E5676_scaffold279G00010 [Cucumis melo var. makuwa])

HSP 1 Score: 100.9 bits (250), Expect = 1.7e-17
Identity = 57/122 (46.72%), Postives = 73/122 (59.84%), Query Frame = 0


Query: 38  PTRHDSTINLESTMLLYCILAKKRVNLGDLIATSILSWMRAPKGVMPFPSTIKALCLKAV 97
           PTRHD+TI LE  M++YCI  K  VNLG +I  SILS M APK +MPFP TIKALCLKAV
Sbjct: 2   PTRHDNTIPLEYAMMIYCIKKKMVVNLGAIIRNSILSLMEAPKDIMPFPFTIKALCLKAV 61

Query: 98  SFLSAIQKIPIPGGLCNQMALNRMIISMDTRKWKGAQRHWATHLKEIPSRRINPPPKAKK 157
             LS   + PI  G+C Q  LN+ I+    ++ +   +     +K       +PPP  K+
Sbjct: 62  PELSTFLQAPISDGVCFQATLNQTIMLHQNKEEERCIK-TLNKVKGEEEEASSPPPPLKR 121

Query: 158 AK 160
            K
Sbjct: 122 KK 122

The following BLAST results are available for this feature:

BLAST of PI0011522 vs.


Match Name	E-value	Identity	Description

BLAST of PI0011522 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7U806	2.6e-24	57.41	Transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold163G00620 PE...	[more]
A0A5D3CVL7	2.6e-24	57.41	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5A7V6M5	2.7e-21	54.74	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold683G0002...	[more]
A0A5D3DVQ6	5.9e-21	47.01	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5A7UUR1	8.0e-18	46.72	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]

BLAST of PI0011522 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0049609.1	5.3e-24	57.41	transposase [Cucumis melo var. makuwa]	[more]
TYK15967.1	5.3e-24	57.41	hypothetical protein E5676_scaffold94G00870 [Cucumis melo var. makuwa]	[more]
KAA0062900.1	5.5e-21	54.74	gag/pol protein [Cucumis melo var. makuwa]	[more]
KAA0054837.1	1.2e-20	47.01	hypothetical protein E6C27_scaffold406G00150 [Cucumis melo var. makuwa] >TYK2777...	[more]
KAA0057279.1	1.7e-17	46.72	hypothetical protein E6C27_scaffold280G001200 [Cucumis melo var. makuwa] >TYK276...	[more]

BLAST of PI0011522 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 176..190
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 169..190

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0011522.1	PI0011522.1	mRNA