PI0011493 (gene) Melon (PI 482460) v1

Overview


Name	PI0011493
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Ty3-gypsy retrotransposon protein
Location	chr10: 13933285 .. 13936575 (-)
RNA-Seq Expression	PI0011493
Synteny	PI0011493

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACATTCAAAGGCAACACTTCCAAAGCTCTAAGCAACACCGGAAAGAGGCCAAATACTCGCAGCCGCTCAAGGGAGACCCAATCGTCTGAGGACATGCCACCCTTTGAGGTCGCAAAGAGTATCTGGGAAGAGTTGTCAAAACCACCAAAAGGTGAATTATAATAAAAGAAAATCCTGTGATTGAGGAGCACGGTTCGTCTTCTGAACGCTCAAGTGAGGAGATGCCTCACTCAAATATAATGTCGGTTATGGTGACCGATGTCGATACGAGTGAAGATAGAATGGCAGAGCTTGAAAAGAAGATTAACATGCTTCTGAAAGCGGTTGAAGAAAGAGATTATGAGATTGCATCCCTGAGAAATCACATTGAAAGTCGTGACGCTGCTGAATCAAGTCACACATATACCACCAAGAATAAGGACAAAGGGAAGGCAATTTTGCAGGAAAGTCAACCACAAAATTCGACCTCAATTGCATCGTTGTCTGTTCAACAGTTGCAGGATATGATAGCCAACTCCATCCGGACTCAATATGGTGGAACTGCTCAAACTTTCTCTTCATATTCCAAGCCATATACGAAGAGGATCGACAATCTGAAAATGCCGATTGGTTACCAGCCACCTAAGTTCCAGCAATTTGATGGAAAAGGCAATCCAAAGCAACACGTCGCCCACTTTATCGAAACATGTGAAACTGCTGGTGCGCGAGGAGATTTGTTGGTTAGACAGTTCGTCCGAACTCTCAAGGAAAATGCCTTCGACTGGTACACCGATCTTGAGCCTGAAACCATTGATAGTTGGGAGCAGCTTGAGAGGGAATTTCTCAACCGCTTCTACAGCACTCGACGTATTGTTAGCATGATAGAGCTAACGGCCACCAAGCAGCGAAAGGGCGAGCCGGTCATTGACTACATTAATCGCTGGAGAGCGTTAAGCCTTGACTGCAAAGACAGATTAACTGAACTGTCAGCAGTGGAAATGTGCACCCAAGGAATGCATTGGGGGCTTCTGTACATCTTGCAGGGAATAAAACCTCGCACCTTTGAAGAGTTAGCAACTAGAGCTCATGATATGGAGTTAAGTATTGCTAATAGAGGAAACAATGACTTGCTGATCCCAGAAGTGAGAAAGGAAAAGAAGGAAATGAAGAGCACCCTGAAGGTATCAAAGGGTGCTACCAAAGAAGCTATGGTCGTTACTACGGCCCCTTTAAAGTTCGTTCCTAAAGAGAAGAAGATGGATAAACGCCAAGATGAAGGCGAAAAAAGACGCCCAACATTGAAAGAGAGGCAAGAAAAAGTTTACCCTTTTCCAGACTCTGACTTACCTGATATGTTAGAGCAATTACTGGAAAAACAACTCATTCAACTTCCTGAATGTAAACGACCAGCAGAAATTGGGAAGGTAAATGATCCAAATTACTGCAAATATCATCGAGTTATCAGCCACCCTGTAGAGAAATGCTTCGTGTTAAAAGAGTTAATTTTGAAATTAGCTCTAGACAAAAAAATTGAACTTGATCTCGATGATGTGGCACAAACGAATCATATTGCAGTAATGAGTCATGCAGAGGGTCAATCACTTACTACAGGTAGTCTAATCCAATTTGGATCTTTGGAGCCTGTTGTTATATATTCTTCACCGGAGGTCTTACAGAAAAATGACATCCGAGCTGTTCACCCAAAAGAAGAAGGAAAGCACGTGGAGAATGCTGACGAGGGATGGACGCTAGTCACGCGTCGAAAAAAACAAAAACAAAATTACTCTAAAAAAGAGTCTCGCTTGTACCGAGAGTATAAAAGAAAGGGTAAGTCTCAGAGAAGAAAAACAAGGAGGGATGCAAGGAAGTTTCAACCAATCACTAAAGAAGGTGAGGAGCTTCCTCGACCACGAAAACCAATAACTTTGAAAGACTTTTTCCCCGAGAACTTTCCATTCGATATTGTTTCGTGCCATGCTGTCAGTACAACCGAAGATGACGCTTCTCCCTCAAATTCACCAGAAGTCAATACAACTGGGATGACACTTCTCCCTCAAAGTCCGCAGAAGCAACAACCAAGCTAGAGGAATTGCCTTCTATGGACATAAATGATTTGTTGTCACTCCCACGAGAAATCAAAGATACAATTATCGAGATATTAAAAAATGATGATGTCTCGACTATTCCTGCGTCACAGACGAAGGCATGTGATTCATGTTGTACATCGATATCATTCAACGATGAAGATTTGCTACTTGGGTCAAGGCTTCATAACAGACCTTTATTTGTGTCTGGATATGTTCGCGAGCAAAAGCTCAATCAAATTCTCATCGATAATGGCTCTGCCGTCAACATTCTACCAAAATCAACCATGAATCGATTAGGTATCTCAATCGAGGAGTTATCAAGCAGTAAATTGGTGATTCAAGGCTTTAATCAAGGAGCACAGCGGGCGATAGGCACTGTTCGTCTGGAGTTACCATAGGCGACTTGCAGGCAAGCACTATATTTCATGTGATCGATTCAAGAACCACTTACAAGTTGTTGTTAGGACGACCGTGGATTCATGAAAACGGAGTAGTGACTTCCACACTCCATCAATGCTTTAAATTTTATAAACAAGGAATAAAGAAGGTTGATGCTGACACTAAGCCATTTTCAGAGGCTGAGTCTCACTTTGCGGATGCAAAATTTTACACAAAAGGAGATGATATAAGTGAGGTCATATCGACTGAAGTTCCCGTAACCAAAGGCACTTATAAGCCCGAGCAAGGAACGATCACAACAAAAAAGTCAAAGGAAGTGAATGTACTCAAGGGTCGAGAGAATGATAAAATAGCGACCCAAACTAAGTCTGAAGTGCCGGCAAAAGAAAGTATAGCGATTCCTCAAGAAAAAGCCTCAAAACCTCCCGTTTTACGTTACATTCCACTATCTCGACGCAAGAAGGGAGAATCGCCATTTGCAGAAAATTCACAAAATTTGGCGGTTGGAGGTGTCGAAATATTAAAGGAAAGTTTTACCACGCCACTTACCAAGATGGATAAAGGAGGGGCGAAAAGGATTGAGAAAGAGAGCCTAGAAGCATGCCTTCCAGAAAAACGAACGACGGAAGGATTCGATCCAAAAGCATATAAGTTGATGGCAAAGGCGGGTTATGACTTTACAACCCGTACCGAGTTCAAAAGCAAGATATTTGATGAAAGGCATGGGCTTTCTCCTACGCAAAGGAAGCTTCAAAAGCAAGGATATTTTATACCAAATTCAAGACCAGGAGTTGGGTATAGTCTTCCGAGCCTGTTCGAATAA

mRNA sequence

ATGACATTCAAAGGCAACACTTCCAAAGCTCTAAGCAACACCGGAAAGAGGCCAAATACTCGCAGCCGCTCAAGGGAGACCCAATCGTCTGAGGACATGCCACCCTTTGAGGTCGCAAAGAGTATCTGGGAAGAGTTGTCAAAACCACCAAAAGAAAATCCTGTGATTGAGGAGCACGGTTCGTCTTCTGAACGCTCAAGTGAGGAGATGCCTCACTCAAATATAATGTCGGTTATGGTGACCGATGTCGATACGAGTGAAGATAGAATGGCAGAGCTTGAAAAGAAGATTAACATGCTTCTGAAAGCGGTTGAAGAAAGAGATTATGAGATTGCATCCCTGAGAAATCACATTGAAAGTCGTGACGCTGCTGAATCAAGTCACACATATACCACCAAGAATAAGGACAAAGGGAAGGCAATTTTGCAGGAAAGTAGTCTAATCCAATTTGGATCTTTGGAGCCTGTTGTTATATATTCTTCACCGGAGGTCTTACAGAAAAATGACATCCGAGCTGTTCACCCAAAAGAAGAAGGAAAGCACGTGGAGAATGCTGACGAGGGATGGACGCTAGTCACGCGTCGAAAAAAACAAAAACAAAATTACTCTAAAAAAGAGTCTCGCTTGTACCGAGAGTATAAAAGAAAGGGTAAGTCTCAGAGAAGAAAAACAAGGAGGGATGCAAGGAAGTTTCAACCAATCACTAAAGAAGGTGAGGAGCTTCCTCGACCACGAAAACCAATAACTTTGAAAGACTTTTTCCCCGAGAACTTTCCATTCGATATTGTTTCGTGCCATGCTGTCAGTACAACCGAAGATGACGCTTCTCCCTCAAATTCACCAGAAGTCAATACAACTGGGATGACACTTCTCCCTCAAATTCCCGTAACCAAAGGCACTTATAAGCCCGAGCAAGGAACGATCACAACAAAAAAGTCAAAGGAAGTGAATGTACTCAAGGGTCGAGAGAATGATAAAATAGCGACCCAAACTAAGTCTGAAGTGCCGGCAAAAGAAAGTATAGCGATTCCTCAAGAAAAAGCCTCAAAACCTCCCGTTTTACGTTACATTCCACTATCTCGACGCAAGAAGGGAGAATCGCCATTTGCAGAAAATTCACAAAATTTGGCGGTTGGAGGTGTCGAAATATTAAAGGAAAGTTTTACCACGCCACTTACCAAGATGGATAAAGGAGGGGCGAAAAGGATTGAGAAAGAGAGCCTAGAAGCATGCCTTCCAGAAAAACGAACGACGGAAGGATTCGATCCAAAAGCATATAAGTTGATGGCAAAGGCGGGTTATGACTTTACAACCCGTACCGAGTTCAAAAGCAAGATATTTGATGAAAGGCATGGGCTTTCTCCTACGCAAAGGAAGCTTCAAAAGCAAGGATATTTTATACCAAATTCAAGACCAGGAGTTGGGTATAGTCTTCCGAGCCTGTTCGAATAA

Coding sequence (CDS)

ATGACATTCAAAGGCAACACTTCCAAAGCTCTAAGCAACACCGGAAAGAGGCCAAATACTCGCAGCCGCTCAAGGGAGACCCAATCGTCTGAGGACATGCCACCCTTTGAGGTCGCAAAGAGTATCTGGGAAGAGTTGTCAAAACCACCAAAAGAAAATCCTGTGATTGAGGAGCACGGTTCGTCTTCTGAACGCTCAAGTGAGGAGATGCCTCACTCAAATATAATGTCGGTTATGGTGACCGATGTCGATACGAGTGAAGATAGAATGGCAGAGCTTGAAAAGAAGATTAACATGCTTCTGAAAGCGGTTGAAGAAAGAGATTATGAGATTGCATCCCTGAGAAATCACATTGAAAGTCGTGACGCTGCTGAATCAAGTCACACATATACCACCAAGAATAAGGACAAAGGGAAGGCAATTTTGCAGGAAAGTAGTCTAATCCAATTTGGATCTTTGGAGCCTGTTGTTATATATTCTTCACCGGAGGTCTTACAGAAAAATGACATCCGAGCTGTTCACCCAAAAGAAGAAGGAAAGCACGTGGAGAATGCTGACGAGGGATGGACGCTAGTCACGCGTCGAAAAAAACAAAAACAAAATTACTCTAAAAAAGAGTCTCGCTTGTACCGAGAGTATAAAAGAAAGGGTAAGTCTCAGAGAAGAAAAACAAGGAGGGATGCAAGGAAGTTTCAACCAATCACTAAAGAAGGTGAGGAGCTTCCTCGACCACGAAAACCAATAACTTTGAAAGACTTTTTCCCCGAGAACTTTCCATTCGATATTGTTTCGTGCCATGCTGTCAGTACAACCGAAGATGACGCTTCTCCCTCAAATTCACCAGAAGTCAATACAACTGGGATGACACTTCTCCCTCAAATTCCCGTAACCAAAGGCACTTATAAGCCCGAGCAAGGAACGATCACAACAAAAAAGTCAAAGGAAGTGAATGTACTCAAGGGTCGAGAGAATGATAAAATAGCGACCCAAACTAAGTCTGAAGTGCCGGCAAAAGAAAGTATAGCGATTCCTCAAGAAAAAGCCTCAAAACCTCCCGTTTTACGTTACATTCCACTATCTCGACGCAAGAAGGGAGAATCGCCATTTGCAGAAAATTCACAAAATTTGGCGGTTGGAGGTGTCGAAATATTAAAGGAAAGTTTTACCACGCCACTTACCAAGATGGATAAAGGAGGGGCGAAAAGGATTGAGAAAGAGAGCCTAGAAGCATGCCTTCCAGAAAAACGAACGACGGAAGGATTCGATCCAAAAGCATATAAGTTGATGGCAAAGGCGGGTTATGACTTTACAACCCGTACCGAGTTCAAAAGCAAGATATTTGATGAAAGGCATGGGCTTTCTCCTACGCAAAGGAAGCTTCAAAAGCAAGGATATTTTATACCAAATTCAAGACCAGGAGTTGGGTATAGTCTTCCGAGCCTGTTCGAATAA

Protein sequence

MTFKGNTSKALSNTGKRPNTRSRSRETQSSEDMPPFEVAKSIWEELSKPPKENPVIEEHGSSSERSSEEMPHSNIMSVMVTDVDTSEDRMAELEKKINMLLKAVEERDYEIASLRNHIESRDAAESSHTYTTKNKDKGKAILQESSLIQFGSLEPVVIYSSPEVLQKNDIRAVHPKEEGKHVENADEGWTLVTRRKKQKQNYSKKESRLYREYKRKGKSQRRKTRRDARKFQPITKEGEELPRPRKPITLKDFFPENFPFDIVSCHAVSTTEDDASPSNSPEVNTTGMTLLPQIPVTKGTYKPEQGTITTKKSKEVNVLKGRENDKIATQTKSEVPAKESIAIPQEKASKPPVLRYIPLSRRKKGESPFAENSQNLAVGGVEILKESFTTPLTKMDKGGAKRIEKESLEACLPEKRTTEGFDPKAYKLMAKAGYDFTTRTEFKSKIFDERHGLSPTQRKLQKQGYFIPNSRPGVGYSLPSLFE

Homology

[Close]

BLAST of PI0011493 vs. ExPASy TrEMBL
Match: A0A5A7UJR2 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold135G001080 PE=4 SV=1)

HSP 1 Score: 430.6 bits (1106), Expect = 8.4e-117
Identity = 334/940 (35.53%), Postives = 391/940 (41.60%), Query Frame = 0


Query: 1   MTFKGNTSKALSNTGKRPNTRSRSRETQSSEDMPPFEVAKSIWEELSKPP------KENP 60
           MT +GNTSKALS+ GKRPNTRSRSRE QSSEDMPPFEVAK+IWE++SKPP      KENP
Sbjct: 1   MTSQGNTSKALSDIGKRPNTRSRSREIQSSEDMPPFEVAKNIWEQISKPPKGGIVIKENP 60

Query: 61  VIEEHGSSSERSSEEMPHSNIMSVMVTDVDTSEDRMAELEKKINMLLKAVEERDYEIASL 120
            I+EH S SER +EE+P  NIMSVMVTDVDTSEDRMA+LEKK+NM +K VEERD+EIA L
Sbjct: 61  AIDEHNSLSERLNEEVPQPNIMSVMVTDVDTSEDRMADLEKKVNMFMKGVEERDFEIALL 120

Query: 121 RNHIESRDAAESSHTYTTKNKDKGKAILQES----------------------------- 180
           +NHIESRDAAESSHT+T KN +KGKAI+QES                             
Sbjct: 121 KNHIESRDAAESSHTHTIKNANKGKAIMQESQPQNSTSIASLSVQKLQEMIANSIKTQYG 180

Query: 181 ------------------------------------------------------------ 240
                                                                       
Sbjct: 181 RPAQTLMERAIQNNMLLISSKLMKLLGIKPRTFEELATRAQDMELSIANRGNNDLLVPEV 240

Query: 241 ------------------------------------------------------------ 300
                                                                       
Sbjct: 241 RKEKKEVKSTQKVLKGATKEAMVVSTTPLKLVSKEKKMEKRQDEGKKRRPTLKERQEKIY 300

Query: 301 ------------------------------------------------------------ 360
                                                                       
Sbjct: 301 PFPDSDLPDMLDQLLEKQLIQLPECKRPAEMGKVNDPNYCKYHRVISHPVEKCFVLKELI 360

Query: 361 ------------------------------------SLIQFGSLEPVVIYSSPEVLQKND 420
                                               SLIQFGSLE +VIYSSPE LQ ND
Sbjct: 361 LKLALDKKIELELDDVAQTNHAAVIIQSDSRLSIIGSLIQFGSLELIVIYSSPEDLQNND 420

Query: 421 IRAVHPKEEGKHVENADEGWTLVTRRKKQKQNYSKKESRLYREYKRKGKSQRRKTRRDAR 477
            R   PKEE K V+N +EGWTLVTRRKK+KQ++S+KES  YR Y+ KGKSQRR TR++ R
Sbjct: 421 FRTDSPKEEEKQVDNVEEGWTLVTRRKKRKQSFSQKESGSYRTYRSKGKSQRRNTRKNLR 480

[Close]

BLAST of PI0011493 vs. ExPASy TrEMBL
Match: A0A5D3D1E5 (Ribonuclease H OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold306G004020 PE=4 SV=1)

HSP 1 Score: 409.8 bits (1052), Expect = 1.5e-110
Identity = 336/1006 (33.40%), Postives = 391/1006 (38.87%), Query Frame = 0


Query: 1    MTFKGNTSKALSNTGKRPNTRSRSRETQSSEDMPPFEVAKSIWEELSKPP------KENP 60
            M  +GNTSKA S+  KRPNTRSRSR+ QSSEDMPPFEVAK+IWE++SKPP      KENP
Sbjct: 1    MISQGNTSKAFSDIDKRPNTRSRSRKIQSSEDMPPFEVAKNIWEQISKPPKGGIVIKENP 60

Query: 61   VIEEHGSSSERSSEEMPHSNIMSVMVTDVDTSEDRMAELEKKINMLLKAVEERDYEIASL 120
             I+EH S  ERS+EE    NIMSVMVTDVDTSEDRMAELEKK+NML+KAVEERD+ IA  
Sbjct: 61   TIDEHNSLYERSNEEASQPNIMSVMVTDVDTSEDRMAELEKKVNMLMKAVEERDFVIALF 120

Query: 121  RNHIESRDAAESSHTYTTKNKDKGKAILQES----------------------------- 180
            +NHIESRDAAESSHT T KN +KGKAI+QES                             
Sbjct: 121  KNHIESRDAAESSHTQTIKNVNKGKAIMQESQPQNSTSIASLSIQQLQEMIANSIKTQYG 180

Query: 181  ------------------------------------------------------------ 240
                                                                        
Sbjct: 181  GPAQTHPSFNSSMERAIQNNMLLISSKLVKLLYTGLEPESIDSWNLLERDFLNRFYSTRR 240

Query: 241  ------------------------------------------------------------ 300
                                                                        
Sbjct: 241  IVSMIELTATKQRKGEPFIDYINHWRALSLDCKDRLTELSAVEMCTQGIHWGLLYILQGI 300

Query: 301  ------------------------------------------------------------ 360
                                                                        
Sbjct: 301  KPLPEVRKEKKEVKSTQKVLKGATKEAMVVSTTPLKLVSKEKKMEKRQDEGENRRPTLKE 360

Query: 361  ------------------------------------------------------------ 420
                                                                        
Sbjct: 361  RQEKIYPFPDSDLPDMLDQLLEKQLIQLPECKRPTEMGRVNDPIIANIIGSSAIPLKNVF 420

Query: 421  ------------------------------------------SLIQFGSLEPVVIYSSPE 477
                                                      SLIQFGSLEPVVIYSSPE
Sbjct: 421  VLKELILKLALDKKIELELDDVAQTNHAAVIIQSDSRLSAIGSLIQFGSLEPVVIYSSPE 480

[Close]

BLAST of PI0011493 vs. ExPASy TrEMBL
Match: A0A5D3BIH8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold180G001270 PE=4 SV=1)

HSP 1 Score: 402.9 bits (1034), Expect = 1.9e-108
Identity = 340/1054 (32.26%), Postives = 397/1054 (37.67%), Query Frame = 0


Query: 1    MTFKGNTSKALSNTGKRPNTRSRSRETQSSEDMPPFEVAKSIWEELSKPP------KENP 60
            MT +GNTSKALS+ GKRPNTRSRSRE QSSEDMPPFEVAK+IW+++SKPP      KENP
Sbjct: 1    MTSQGNTSKALSDIGKRPNTRSRSREIQSSEDMPPFEVAKNIWKQISKPPKGGIVIKENP 60

Query: 61   VIEEHGSSSERSSEEMPHSNIMSVMVTDVDTSEDRMAELEKKINMLLKAVEERDYEIASL 120
             I+EH S SERS+EE+P  NIMSVMVTDVDTSEDRM  LEKK+NM +KAVEERD+EIA L
Sbjct: 61   AIDEHNSLSERSNEEVPQPNIMSVMVTDVDTSEDRMVVLEKKVNMHMKAVEERDFEIALL 120

Query: 121  RNHIESRDAAESSHTYTTKNKDKGKAILQES----------------------------- 180
            +NHIESRDAAESSHT+T KN +KGKAI+QES                             
Sbjct: 121  KNHIESRDAAESSHTHTIKNANKGKAIMQESQPQNSTSIASLSVQQLQEMIANSIKTQYG 180

Query: 181  ------------------------------------------------------------ 240
                                                                        
Sbjct: 181  GPAQTHPSFNSSMERGNPKQHVAHFIETCETAGTRGDLLVKQFVRTLKGNAFDWYTDLEP 240

Query: 241  ------------------------------------------------------------ 300
                                                                        
Sbjct: 241  ESIDSWEQLERDFLNRFYSTRRIVSMIELTATKQRKGEPVIDYINRWRALSLDCKDRLTE 300

Query: 301  ------------------------------------------------------------ 360
                                                                        
Sbjct: 301  LSAVEMCTQGMHWGLLYILQGIKPRTFEELATRAHDMELSIANRGNNDLLVPEVRKEKKE 360

Query: 361  ------------------------------------------------------------ 420
                                                                        
Sbjct: 361  VKSTQKALKGVTKEAMVVSTTPLKLVSKEKKMEKRQDEGEKRRPTLKERQEKVYPFPDSD 420

Query: 421  ------------------------------------------------------------ 477
                                                                        
Sbjct: 421  LPDMLDQLLEKQLIQLPECKRPAEMGRVNDPNYCKYHRVISHPVEKCFVLKELILKLALD 480

[Close]

BLAST of PI0011493 vs. ExPASy TrEMBL
Match: A0A5A7TZU9 (Ribonuclease H OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold498G00940 PE=4 SV=1)

HSP 1 Score: 400.6 bits (1028), Expect = 9.3e-108
Identity = 342/1076 (31.78%), Postives = 400/1076 (37.17%), Query Frame = 0


Query: 1    MTFKGNTSKALSNTGKRPNTRSRSRETQSSEDMPPFEVAKSIWEELSKPP------KENP 60
            MT +GNTSKALS+ GKRPNTRSRSRE QSSEDMPPF+VAK+IWE++SKPP      KENP
Sbjct: 1    MTSQGNTSKALSDIGKRPNTRSRSREIQSSEDMPPFDVAKNIWEQISKPPKGGIVIKENP 60

Query: 61   VIEEHGSSSERSSEEMPHSNIMSVMVTDVDTSEDRMAELEKKINMLLKAVEERDYEIASL 120
             ++EH S SERS+EE+P  NIMSVMVTDVDTSEDRMAELEKK+NML+KAVEERD+EIA L
Sbjct: 61   AMDEHNSLSERSNEEVPQPNIMSVMVTDVDTSEDRMAELEKKVNMLMKAVEERDFEIALL 120

Query: 121  RNHIESRDAAESSHTYTTKNKDKGKAILQES----------------------------- 180
            +NHIESRDAAESSHT+T KN +KGKAI+QES                             
Sbjct: 121  KNHIESRDAAESSHTHTIKNANKGKAIMQESQPQNSTSIASLSVQQLQEMIANSIKTQYG 180

Query: 181  ------------------------------------------------------------ 240
                                                                        
Sbjct: 181  GPAQTFSLYSKPYTKRIDNMRMPHGYQPPKFQQFDGKGNPKQHVAHFIETCETAGTRGDL 240

Query: 241  ------------------------------------------------------------ 300
                                                                        
Sbjct: 241  LVKQFVRTLKGNAFDWYTDLEPESIDSWEQLERDFLNRFYSTRRIVSMIELTATKQRKGE 300

Query: 301  ------------------------------------------------------------ 360
                                                                        
Sbjct: 301  PVIDYINRWRALSLDCKDRLTELSAVEMCTQGMHWGLLYILQGIKPRTFEELATRAHDME 360

Query: 361  ------------------------------------------------------------ 420
                                                                        
Sbjct: 361  LSIANRGNNDLLVPEVRKEKKEVKSTQKALKGVTKEAMVVSTTPLKLVSKEKKMEKRQDE 420

Query: 421  ------------------------------------------------------------ 477
                                                                        
Sbjct: 421  GEKRRPTLKERQEKVYPFPDSDLPDMLDQLLEKQLIQLPECKRPAEMGRVNDPNYCKYHR 480

[Close]

BLAST of PI0011493 vs. ExPASy TrEMBL
Match: A0A5A7TSN4 (Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold114G00760 PE=4 SV=1)

HSP 1 Score: 345.5 bits (885), Expect = 3.6e-91
Identity = 240/597 (40.20%), Postives = 309/597 (51.76%), Query Frame = 0


Query: 40  KSIWEELSKPPKENPVIEEHGSSSERSSEEMPHSNIMSVMVTDVDTSEDRMAELEKKINM 99
           K + +E     +++   + H +  ER  +  P  N      +D+  + D++  LEK +  
Sbjct: 143 KLVSKEKKMEKRQDEGEKRHPTLKERQEKIYPFPN------SDLPDTLDQL--LEKHLIQ 202

Query: 100 LLKAVEERDYEIASLRNHIESRDAAESSHTYTTKNKDKGKAILQESSLIQFGSLEPVVIY 159
           L +++++        +  +E  D  +++H       +   + +   SLIQFGSLEPVVIY
Sbjct: 203 LPESLDK--------KIELELDDVTQTNHAAVIIQSNSRLSAI--GSLIQFGSLEPVVIY 262

Query: 160 SSPEVLQKNDIRAVHPKEEGKHVENADEGWTLVTRRKKQKQNYSKKESRLYREYKRKGKS 219
           SSPE LQ ND RA   KEE K V+N +EGWTLVTRRKK KQ++S+KES  YR Y  KGKS
Sbjct: 263 SSPEDLQNNDFRADGLKEEEKQVDNVEEGWTLVTRRKKHKQSFSQKESGSYRTYMSKGKS 322

Query: 220 QRRKTRRDARKFQPITKEGEELPRPRKPITLKDFFPENFPFDIVSCHAVSTTEDDASPSN 279
           QRR TR++ RKF PI ++ E L RPR+PI LKDFFP+NFP +IVSCH  STTE+DA P N
Sbjct: 323 QRRNTRKNLRKFLPIIEKSEGLSRPRRPIILKDFFPKNFPMEIVSCHTTSTTEEDAFPLN 382

Query: 280 -----------------------------------SPEVNTT------------------ 339
                                              + +V+TT                  
Sbjct: 383 AMKETPRPEDLLSLGINDLLTLSREVKDTIIEILKNDDVSTTVTSPTKACDSCCMSISFS 442

Query: 340 -----------------------------------GMTLLP------------------- 399
                                               + +LP                   
Sbjct: 443 DEDLLLGSKLHNRPLYVSGYVREQRLNQILIDNGSAVNILPKSTMNQLGISVEELSNSKL 502

Query: 400 ----------------------------------------------------QIPVTKGT 459
                                                               ++PVTKGT
Sbjct: 503 LIQGFNQGAQRAIGTGIWKVDADSRPFTKAESHFADAKFYTKSEDVSEIISTEVPVTKGT 562

Query: 460 YKPEQGTITTKKSKEVNVLKGRENDKIATQTKSEVPAKESIAIPQEKASKPPVLRYIPLS 477
           +K EQ  IT+KK+ + + L  ++N ++ T+TK   P  E IA  Q++ S PPVLRYIPLS
Sbjct: 563 FKNEQEMITSKKTNKGDALNSQQNGELTTETKLRAPEAEKIATLQKEVSNPPVLRYIPLS 622

[Close]

BLAST of PI0011493 vs. NCBI nr
Match: KAA0053731.1 (uncharacterized protein E6C27_scaffold135G001080 [Cucumis melo var. makuwa])

HSP 1 Score: 430.6 bits (1106), Expect = 1.7e-116
Identity = 334/940 (35.53%), Postives = 391/940 (41.60%), Query Frame = 0


Query: 1   MTFKGNTSKALSNTGKRPNTRSRSRETQSSEDMPPFEVAKSIWEELSKPP------KENP 60
           MT +GNTSKALS+ GKRPNTRSRSRE QSSEDMPPFEVAK+IWE++SKPP      KENP
Sbjct: 1   MTSQGNTSKALSDIGKRPNTRSRSREIQSSEDMPPFEVAKNIWEQISKPPKGGIVIKENP 60

Query: 61  VIEEHGSSSERSSEEMPHSNIMSVMVTDVDTSEDRMAELEKKINMLLKAVEERDYEIASL 120
            I+EH S SER +EE+P  NIMSVMVTDVDTSEDRMA+LEKK+NM +K VEERD+EIA L
Sbjct: 61  AIDEHNSLSERLNEEVPQPNIMSVMVTDVDTSEDRMADLEKKVNMFMKGVEERDFEIALL 120

Query: 121 RNHIESRDAAESSHTYTTKNKDKGKAILQES----------------------------- 180
           +NHIESRDAAESSHT+T KN +KGKAI+QES                             
Sbjct: 121 KNHIESRDAAESSHTHTIKNANKGKAIMQESQPQNSTSIASLSVQKLQEMIANSIKTQYG 180

Query: 181 ------------------------------------------------------------ 240
                                                                       
Sbjct: 181 RPAQTLMERAIQNNMLLISSKLMKLLGIKPRTFEELATRAQDMELSIANRGNNDLLVPEV 240

Query: 241 ------------------------------------------------------------ 300
                                                                       
Sbjct: 241 RKEKKEVKSTQKVLKGATKEAMVVSTTPLKLVSKEKKMEKRQDEGKKRRPTLKERQEKIY 300

Query: 301 ------------------------------------------------------------ 360
                                                                       
Sbjct: 301 PFPDSDLPDMLDQLLEKQLIQLPECKRPAEMGKVNDPNYCKYHRVISHPVEKCFVLKELI 360

Query: 361 ------------------------------------SLIQFGSLEPVVIYSSPEVLQKND 420
                                               SLIQFGSLE +VIYSSPE LQ ND
Sbjct: 361 LKLALDKKIELELDDVAQTNHAAVIIQSDSRLSIIGSLIQFGSLELIVIYSSPEDLQNND 420

Query: 421 IRAVHPKEEGKHVENADEGWTLVTRRKKQKQNYSKKESRLYREYKRKGKSQRRKTRRDAR 477
            R   PKEE K V+N +EGWTLVTRRKK+KQ++S+KES  YR Y+ KGKSQRR TR++ R
Sbjct: 421 FRTDSPKEEEKQVDNVEEGWTLVTRRKKRKQSFSQKESGSYRTYRSKGKSQRRNTRKNLR 480

[Close]

BLAST of PI0011493 vs. NCBI nr
Match: TYK18071.1 (uncharacterized protein E5676_scaffold306G004020 [Cucumis melo var. makuwa])

HSP 1 Score: 409.8 bits (1052), Expect = 3.2e-110
Identity = 336/1006 (33.40%), Postives = 391/1006 (38.87%), Query Frame = 0


Query: 1    MTFKGNTSKALSNTGKRPNTRSRSRETQSSEDMPPFEVAKSIWEELSKPP------KENP 60
            M  +GNTSKA S+  KRPNTRSRSR+ QSSEDMPPFEVAK+IWE++SKPP      KENP
Sbjct: 1    MISQGNTSKAFSDIDKRPNTRSRSRKIQSSEDMPPFEVAKNIWEQISKPPKGGIVIKENP 60

Query: 61   VIEEHGSSSERSSEEMPHSNIMSVMVTDVDTSEDRMAELEKKINMLLKAVEERDYEIASL 120
             I+EH S  ERS+EE    NIMSVMVTDVDTSEDRMAELEKK+NML+KAVEERD+ IA  
Sbjct: 61   TIDEHNSLYERSNEEASQPNIMSVMVTDVDTSEDRMAELEKKVNMLMKAVEERDFVIALF 120

Query: 121  RNHIESRDAAESSHTYTTKNKDKGKAILQES----------------------------- 180
            +NHIESRDAAESSHT T KN +KGKAI+QES                             
Sbjct: 121  KNHIESRDAAESSHTQTIKNVNKGKAIMQESQPQNSTSIASLSIQQLQEMIANSIKTQYG 180

Query: 181  ------------------------------------------------------------ 240
                                                                        
Sbjct: 181  GPAQTHPSFNSSMERAIQNNMLLISSKLVKLLYTGLEPESIDSWNLLERDFLNRFYSTRR 240

Query: 241  ------------------------------------------------------------ 300
                                                                        
Sbjct: 241  IVSMIELTATKQRKGEPFIDYINHWRALSLDCKDRLTELSAVEMCTQGIHWGLLYILQGI 300

Query: 301  ------------------------------------------------------------ 360
                                                                        
Sbjct: 301  KPLPEVRKEKKEVKSTQKVLKGATKEAMVVSTTPLKLVSKEKKMEKRQDEGENRRPTLKE 360

Query: 361  ------------------------------------------------------------ 420
                                                                        
Sbjct: 361  RQEKIYPFPDSDLPDMLDQLLEKQLIQLPECKRPTEMGRVNDPIIANIIGSSAIPLKNVF 420

Query: 421  ------------------------------------------SLIQFGSLEPVVIYSSPE 477
                                                      SLIQFGSLEPVVIYSSPE
Sbjct: 421  VLKELILKLALDKKIELELDDVAQTNHAAVIIQSDSRLSAIGSLIQFGSLEPVVIYSSPE 480

[Close]

BLAST of PI0011493 vs. NCBI nr
Match: TYJ98225.1 (uncharacterized protein E5676_scaffold180G001270 [Cucumis melo var. makuwa])

HSP 1 Score: 402.9 bits (1034), Expect = 3.9e-108
Identity = 340/1054 (32.26%), Postives = 397/1054 (37.67%), Query Frame = 0


Query: 1    MTFKGNTSKALSNTGKRPNTRSRSRETQSSEDMPPFEVAKSIWEELSKPP------KENP 60
            MT +GNTSKALS+ GKRPNTRSRSRE QSSEDMPPFEVAK+IW+++SKPP      KENP
Sbjct: 1    MTSQGNTSKALSDIGKRPNTRSRSREIQSSEDMPPFEVAKNIWKQISKPPKGGIVIKENP 60

Query: 61   VIEEHGSSSERSSEEMPHSNIMSVMVTDVDTSEDRMAELEKKINMLLKAVEERDYEIASL 120
             I+EH S SERS+EE+P  NIMSVMVTDVDTSEDRM  LEKK+NM +KAVEERD+EIA L
Sbjct: 61   AIDEHNSLSERSNEEVPQPNIMSVMVTDVDTSEDRMVVLEKKVNMHMKAVEERDFEIALL 120

Query: 121  RNHIESRDAAESSHTYTTKNKDKGKAILQES----------------------------- 180
            +NHIESRDAAESSHT+T KN +KGKAI+QES                             
Sbjct: 121  KNHIESRDAAESSHTHTIKNANKGKAIMQESQPQNSTSIASLSVQQLQEMIANSIKTQYG 180

Query: 181  ------------------------------------------------------------ 240
                                                                        
Sbjct: 181  GPAQTHPSFNSSMERGNPKQHVAHFIETCETAGTRGDLLVKQFVRTLKGNAFDWYTDLEP 240

Query: 241  ------------------------------------------------------------ 300
                                                                        
Sbjct: 241  ESIDSWEQLERDFLNRFYSTRRIVSMIELTATKQRKGEPVIDYINRWRALSLDCKDRLTE 300

Query: 301  ------------------------------------------------------------ 360
                                                                        
Sbjct: 301  LSAVEMCTQGMHWGLLYILQGIKPRTFEELATRAHDMELSIANRGNNDLLVPEVRKEKKE 360

Query: 361  ------------------------------------------------------------ 420
                                                                        
Sbjct: 361  VKSTQKALKGVTKEAMVVSTTPLKLVSKEKKMEKRQDEGEKRRPTLKERQEKVYPFPDSD 420

Query: 421  ------------------------------------------------------------ 477
                                                                        
Sbjct: 421  LPDMLDQLLEKQLIQLPECKRPAEMGRVNDPNYCKYHRVISHPVEKCFVLKELILKLALD 480

[Close]

BLAST of PI0011493 vs. NCBI nr
Match: KAA0047477.1 (uncharacterized protein E6C27_scaffold498G00940 [Cucumis melo var. makuwa])

HSP 1 Score: 400.6 bits (1028), Expect = 1.9e-107
Identity = 342/1076 (31.78%), Postives = 400/1076 (37.17%), Query Frame = 0


Query: 1    MTFKGNTSKALSNTGKRPNTRSRSRETQSSEDMPPFEVAKSIWEELSKPP------KENP 60
            MT +GNTSKALS+ GKRPNTRSRSRE QSSEDMPPF+VAK+IWE++SKPP      KENP
Sbjct: 1    MTSQGNTSKALSDIGKRPNTRSRSREIQSSEDMPPFDVAKNIWEQISKPPKGGIVIKENP 60

Query: 61   VIEEHGSSSERSSEEMPHSNIMSVMVTDVDTSEDRMAELEKKINMLLKAVEERDYEIASL 120
             ++EH S SERS+EE+P  NIMSVMVTDVDTSEDRMAELEKK+NML+KAVEERD+EIA L
Sbjct: 61   AMDEHNSLSERSNEEVPQPNIMSVMVTDVDTSEDRMAELEKKVNMLMKAVEERDFEIALL 120

Query: 121  RNHIESRDAAESSHTYTTKNKDKGKAILQES----------------------------- 180
            +NHIESRDAAESSHT+T KN +KGKAI+QES                             
Sbjct: 121  KNHIESRDAAESSHTHTIKNANKGKAIMQESQPQNSTSIASLSVQQLQEMIANSIKTQYG 180

Query: 181  ------------------------------------------------------------ 240
                                                                        
Sbjct: 181  GPAQTFSLYSKPYTKRIDNMRMPHGYQPPKFQQFDGKGNPKQHVAHFIETCETAGTRGDL 240

Query: 241  ------------------------------------------------------------ 300
                                                                        
Sbjct: 241  LVKQFVRTLKGNAFDWYTDLEPESIDSWEQLERDFLNRFYSTRRIVSMIELTATKQRKGE 300

Query: 301  ------------------------------------------------------------ 360
                                                                        
Sbjct: 301  PVIDYINRWRALSLDCKDRLTELSAVEMCTQGMHWGLLYILQGIKPRTFEELATRAHDME 360

Query: 361  ------------------------------------------------------------ 420
                                                                        
Sbjct: 361  LSIANRGNNDLLVPEVRKEKKEVKSTQKALKGVTKEAMVVSTTPLKLVSKEKKMEKRQDE 420

Query: 421  ------------------------------------------------------------ 477
                                                                        
Sbjct: 421  GEKRRPTLKERQEKVYPFPDSDLPDMLDQLLEKQLIQLPECKRPAEMGRVNDPNYCKYHR 480

[Close]

BLAST of PI0011493 vs. NCBI nr
Match: KAA0046553.1 (ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 345.5 bits (885), Expect = 7.4e-91
Identity = 240/597 (40.20%), Postives = 309/597 (51.76%), Query Frame = 0


Query: 40  KSIWEELSKPPKENPVIEEHGSSSERSSEEMPHSNIMSVMVTDVDTSEDRMAELEKKINM 99
           K + +E     +++   + H +  ER  +  P  N      +D+  + D++  LEK +  
Sbjct: 143 KLVSKEKKMEKRQDEGEKRHPTLKERQEKIYPFPN------SDLPDTLDQL--LEKHLIQ 202

Query: 100 LLKAVEERDYEIASLRNHIESRDAAESSHTYTTKNKDKGKAILQESSLIQFGSLEPVVIY 159
           L +++++        +  +E  D  +++H       +   + +   SLIQFGSLEPVVIY
Sbjct: 203 LPESLDK--------KIELELDDVTQTNHAAVIIQSNSRLSAI--GSLIQFGSLEPVVIY 262

Query: 160 SSPEVLQKNDIRAVHPKEEGKHVENADEGWTLVTRRKKQKQNYSKKESRLYREYKRKGKS 219
           SSPE LQ ND RA   KEE K V+N +EGWTLVTRRKK KQ++S+KES  YR Y  KGKS
Sbjct: 263 SSPEDLQNNDFRADGLKEEEKQVDNVEEGWTLVTRRKKHKQSFSQKESGSYRTYMSKGKS 322

Query: 220 QRRKTRRDARKFQPITKEGEELPRPRKPITLKDFFPENFPFDIVSCHAVSTTEDDASPSN 279
           QRR TR++ RKF PI ++ E L RPR+PI LKDFFP+NFP +IVSCH  STTE+DA P N
Sbjct: 323 QRRNTRKNLRKFLPIIEKSEGLSRPRRPIILKDFFPKNFPMEIVSCHTTSTTEEDAFPLN 382

Query: 280 -----------------------------------SPEVNTT------------------ 339
                                              + +V+TT                  
Sbjct: 383 AMKETPRPEDLLSLGINDLLTLSREVKDTIIEILKNDDVSTTVTSPTKACDSCCMSISFS 442

Query: 340 -----------------------------------GMTLLP------------------- 399
                                               + +LP                   
Sbjct: 443 DEDLLLGSKLHNRPLYVSGYVREQRLNQILIDNGSAVNILPKSTMNQLGISVEELSNSKL 502

Query: 400 ----------------------------------------------------QIPVTKGT 459
                                                               ++PVTKGT
Sbjct: 503 LIQGFNQGAQRAIGTGIWKVDADSRPFTKAESHFADAKFYTKSEDVSEIISTEVPVTKGT 562

Query: 460 YKPEQGTITTKKSKEVNVLKGRENDKIATQTKSEVPAKESIAIPQEKASKPPVLRYIPLS 477
           +K EQ  IT+KK+ + + L  ++N ++ T+TK   P  E IA  Q++ S PPVLRYIPLS
Sbjct: 563 FKNEQEMITSKKTNKGDALNSQQNGELTTETKLRAPEAEKIATLQKEVSNPPVLRYIPLS 622

The following BLAST results are available for this feature:

BLAST of PI0011493 vs.


Match Name	E-value	Identity	Description

BLAST of PI0011493 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UJR2	8.4e-117	35.53	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold13...	[more]
A0A5D3D1E5	1.5e-110	33.40	Ribonuclease H OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold306G00402...	[more]
A0A5D3BIH8	1.9e-108	32.26	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5A7TZU9	9.3e-108	31.78	Ribonuclease H OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold498G00940...	[more]
A0A5A7TSN4	3.6e-91	40.20	Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2...	[more]

BLAST of PI0011493 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0053731.1	1.7e-116	35.53	uncharacterized protein E6C27_scaffold135G001080 [Cucumis melo var. makuwa]	[more]
TYK18071.1	3.2e-110	33.40	uncharacterized protein E5676_scaffold306G004020 [Cucumis melo var. makuwa]	[more]
TYJ98225.1	3.9e-108	32.26	uncharacterized protein E5676_scaffold180G001270 [Cucumis melo var. makuwa]	[more]
KAA0047477.1	1.9e-107	31.78	uncharacterized protein E6C27_scaffold498G00940 [Cucumis melo var. makuwa]	[more]
KAA0046553.1	7.4e-91	40.20	ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]	[more]

BLAST of PI0011493 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 83..103
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..18
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..76
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 44..66
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 194..247
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 214..229
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 230..247

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0011493.1	PI0011493.1	mRNA