PI0011324 (gene) Melon (PI 482460) v1

Overview


Name	PI0011324
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	28 kDa ribonucleoprotein, chloroplastic-like
Location	chr02: 24689133 .. 24690890 (+)
RNA-Seq Expression	PI0011324
Synteny	PI0011324

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTTCTACATCAGCCACTTCCGTTTTCAAGCCTTTATCCAAGCCGGATTCTTGCTTTCTCTCTTTACCTTCTCTATTCACTGGCAGACCCCCACATACTTTCCTCTCTTTCCCTTCGAAATTCATCCCCTTCCATCTTTCCTCTTCGTCTTCCCATTCTTCATGTTTTTCCCCTTCAAAGAAGAAACCCCATCTTCCCTCTGTAGCTCAAACTTCCGACTGGGCTCAAGAAGATGAAACTATCACCATTGACCCAAAACTCGGCAACGACGAAGGTGCGGAAGAAGAAGACGGCCCCCATTGGGAAAATGAAGAGCTCAGTGAAACTGAGTCTCGTATTTCTGCTTGGGAAGGTGAAGGTGAAGATGGAGGAAGTGAGGCTGAAGTAGGTGGAGATGAAGAAGAAGAAGTGGAAGGACCTTATGAAGAGCCAAACGAAGATGCTAAATTGTTTGTTGGGAATTTGCCTTATGATGTTGACAGTGAAAAGTTAGCAATGCTCTTTGAGAAGGCTGGAACTGTGGAGATTGCTGAGGTGAGCTTTAGTTACATTGTTGCTGTCGGTTTTGTTTATGGATTTGGTTTAAACTTTTAATCTGCTTGTGATTGTGAGGAGTGCAGGTTATTTACAACAGGGAAACAGATCGGAGTCGTGGTTTTGGGTTTGTGACAATGAGTACTGTCGAAGAAGCTGAGAAAGCTGTGGATACCTTCAACCGTTATGTAAGCTTTTCTAGACATGATTCAGTCATATTTGAGTATCATGAATGAAACCTTATCTTCATTCTTACTTTTCAATGGAAGCATTTACTGCCATACTTATCTTTGCATTTAACCATTTCATTTTATTCTGAAGAGTTTAAATGATCTGGTTTTCATGAATCTGAGGACTTGTTTGTGTAGGACTTAGCCATTAGGACGACAGGTGAGTTTGTTGAATTCACGTAATATTGAAAATAAGTTATTTTTTAGTGTTTGGCCACCATTCAAAAAGCTTTCAAAGTTTATTTTCTCTAGTCAATCCTTACATATCCATAGCTGTAATGATTTGTTTGTTTGAATGTTTGATGATGAGATTGATTTTGCTATCAGGATAAGCTAAGGTTCCCCTAGAGGCCATGTTCTTGTGTAGAATAGAGTATTTCAAACAAATGTAATTGTTTGTTTTCTTTGATTGAGATACCCCTTGACTTTTGCTTGGTATGTTTAAACTTTTTCATTGTCAGTTCTACAGAGGAATTTATGGGGATAAAATGTATTTTTCTGGGTTTATAGGAGTTATCAGGGAGGCTGTTGACTGTTAATAAGGCTGCCCCAAGAGGTTCGAGGCAAGAACGCGAACCTCGAACATTCCAATCCACTTTTAGAATCTATGTGGGCAATCTTCCCTGGGATGTAGACAATGCACGCCTGGAGCAGGTCTTTAGTGAACATGGTAAGGTAGTAGATGCTCGGGTTCTTTATGACCGGGACAGTGGCCGTTCTCGTGGCTTTGGCTTTGTGACCATGGCTGATGAAACCGGAATGAATGATGCCATTGCTGCTCTGGATGGACAGGTATGAAAACTGGAGTTTCAATTGGTTTAACACTTTTAGGATCAGCACAACACAAATGATGAAGCTTTCATGTCTCCATAAGAAAAAAAAAACTTACCAACTGATTACAAAACATCTTGAAATTTGAAATGTGCAGAGTCTAGAAGGAAGAGCAATCAGAGTAAATGTTGCTGAGGAAAGACCAAGGCGCAACTTCTGA

mRNA sequence

ATGGCTTCTACATCAGCCACTTCCGTTTTCAAGCCTTTATCCAAGCCGGATTCTTGCTTTCTCTCTTTACCTTCTCTATTCACTGGCAGACCCCCACATACTTTCCTCTCTTTCCCTTCGAAATTCATCCCCTTCCATCTTTCCTCTTCGTCTTCCCATTCTTCATGTTTTTCCCCTTCAAAGAAGAAACCCCATCTTCCCTCTGTAGCTCAAACTTCCGACTGGGCTCAAGAAGATGAAACTATCACCATTGACCCAAAACTCGGCAACGACGAAGGTGCGGAAGAAGAAGACGGCCCCCATTGGGAAAATGAAGAGCTCAGTGAAACTGAGTCTCGTATTTCTGCTTGGGAAGGTGAAGGTGAAGATGGAGGAAGTGAGGCTGAAGTAGGTGGAGATGAAGAAGAAGAAGTGGAAGGACCTTATGAAGAGCCAAACGAAGATGCTAAATTGTTTGTTGGGAATTTGCCTTATGATGTTGACAGTGAAAAGTTAGCAATGCTCTTTGAGAAGGCTGGAACTGTGGAGATTGCTGAGGTTATTTACAACAGGGAAACAGATCGGAGTCGTGGTTTTGGGTTTGTGACAATGAGTACTGTCGAAGAAGCTGAGAAAGCTGTGGATACCTTCAACCGTTATGAGTTATCAGGGAGGCTGTTGACTGTTAATAAGGCTGCCCCAAGAGGTTCGAGGCAAGAACGCGAACCTCGAACATTCCAATCCACTTTTAGAATCTATGTGGGCAATCTTCCCTGGGATGTAGACAATGCACGCCTGGAGCAGGTCTTTAGTGAACATGGTAAGGTAGTAGATGCTCGGGTTCTTTATGACCGGGACAGTGGCCGTTCTCGTGGCTTTGGCTTTGTGACCATGGCTGATGAAACCGGAATGAATGATGCCATTGCTGCTCTGGATGGACAGAGTCTAGAAGGAAGAGCAATCAGAGTAAATGTTGCTGAGGAAAGACCAAGGCGCAACTTCTGA

Coding sequence (CDS)

ATGGCTTCTACATCAGCCACTTCCGTTTTCAAGCCTTTATCCAAGCCGGATTCTTGCTTTCTCTCTTTACCTTCTCTATTCACTGGCAGACCCCCACATACTTTCCTCTCTTTCCCTTCGAAATTCATCCCCTTCCATCTTTCCTCTTCGTCTTCCCATTCTTCATGTTTTTCCCCTTCAAAGAAGAAACCCCATCTTCCCTCTGTAGCTCAAACTTCCGACTGGGCTCAAGAAGATGAAACTATCACCATTGACCCAAAACTCGGCAACGACGAAGGTGCGGAAGAAGAAGACGGCCCCCATTGGGAAAATGAAGAGCTCAGTGAAACTGAGTCTCGTATTTCTGCTTGGGAAGGTGAAGGTGAAGATGGAGGAAGTGAGGCTGAAGTAGGTGGAGATGAAGAAGAAGAAGTGGAAGGACCTTATGAAGAGCCAAACGAAGATGCTAAATTGTTTGTTGGGAATTTGCCTTATGATGTTGACAGTGAAAAGTTAGCAATGCTCTTTGAGAAGGCTGGAACTGTGGAGATTGCTGAGGTTATTTACAACAGGGAAACAGATCGGAGTCGTGGTTTTGGGTTTGTGACAATGAGTACTGTCGAAGAAGCTGAGAAAGCTGTGGATACCTTCAACCGTTATGAGTTATCAGGGAGGCTGTTGACTGTTAATAAGGCTGCCCCAAGAGGTTCGAGGCAAGAACGCGAACCTCGAACATTCCAATCCACTTTTAGAATCTATGTGGGCAATCTTCCCTGGGATGTAGACAATGCACGCCTGGAGCAGGTCTTTAGTGAACATGGTAAGGTAGTAGATGCTCGGGTTCTTTATGACCGGGACAGTGGCCGTTCTCGTGGCTTTGGCTTTGTGACCATGGCTGATGAAACCGGAATGAATGATGCCATTGCTGCTCTGGATGGACAGAGTCTAGAAGGAAGAGCAATCAGAGTAAATGTTGCTGAGGAAAGACCAAGGCGCAACTTCTGA

Protein sequence

MASTSATSVFKPLSKPDSCFLSLPSLFTGRPPHTFLSFPSKFIPFHLSSSSSHSSCFSPSKKKPHLPSVAQTSDWAQEDETITIDPKLGNDEGAEEEDGPHWENEELSETESRISAWEGEGEDGGSEAEVGGDEEEEVEGPYEEPNEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVDTFNRYELSGRLLTVNKAAPRGSRQEREPRTFQSTFRIYVGNLPWDVDNARLEQVFSEHGKVVDARVLYDRDSGRSRGFGFVTMADETGMNDAIAALDGQSLEGRAIRVNVAEERPRRNF

Homology

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BLAST of PI0011324 vs. ExPASy Swiss-Prot
Match: Q04836 (31 kDa ribonucleoprotein, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CP31A PE=1 SV=1)

HSP 1 Score: 310.8 bits (795), Expect = 1.8e-83
Identity = 194/337 (57.57%), Postives = 233/337 (69.14%), Query Frame = 0


Query: 1   MASTSATSVFKPLSKPD---SCFLSLPSLFTG------RPPHTFLSFPSKFIPFHLSSSS 60
           MAS+  TS  KPL+  D   S   S PS+ +       R     L      +P   S  S
Sbjct: 1   MASSIVTSSLKPLAMADSSSSTIFSHPSISSTISSSRIRSSSVSLLTGRINLPLSFSRVS 60

Query: 61  SHSSCFSPSKKKPHLPSVAQTSDWAQEDETITIDPKLGNDEGAEEEDGPHWENEELSE-T 120
                 +  KK P +  VAQTSDWA+E          G    A EE     E++++SE  
Sbjct: 61  LSLKTKTHLKKSPFVSFVAQTSDWAEEG---------GEGSVAVEETENSLESQDVSEGD 120

Query: 121 ESRISAWEGEGEDGG-SEAEVG-GDEEEEVEGPYEEPNEDAKLFVGNLPYDVDSEKLAML 180
           ES   A EG+  +G  SE +V  G   E  E P  EP+E+AKLFVGNL YDV+S+ LAML
Sbjct: 121 ESEGDASEGDVSEGDESEGDVSEGAVSERAEFP--EPSEEAKLFVGNLAYDVNSQALAML 180

Query: 181 FEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVDTFNRYELSGRLLTVNKAAPR 240
           FE+AGTVEIAEVIYNRETD+SRGFGFVTMS+V+EAE AV+ FNRY+L+GRLLTVNKAAPR
Sbjct: 181 FEQAGTVEIAEVIYNRETDQSRGFGFVTMSSVDEAETAVEKFNRYDLNGRLLTVNKAAPR 240

Query: 241 GSRQEREPRTFQSTFRIYVGNLPWDVDNARLEQVFSEHGKVVDARVLYDRDSGRSRGFGF 300
           GSR ER PR ++  FR+YVGNLPWDVDN RLEQ+FSEHGKVV+ARV+YDR++GRSRGFGF
Sbjct: 241 GSRPERAPRVYEPAFRVYVGNLPWDVDNGRLEQLFSEHGKVVEARVVYDRETGRSRGFGF 300

Query: 301 VTMADETGMNDAIAALDGQSLEGRAIRVNVAEERPRR 326
           VTM+D   +N+AI+ALDGQ+LEGRAIRVNVAEERP R
Sbjct: 301 VTMSDVDELNEAISALDGQNLEGRAIRVNVAEERPPR 326

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BLAST of PI0011324 vs. ExPASy Swiss-Prot
Match: P19683 (31 kDa ribonucleoprotein, chloroplastic OS=Nicotiana sylvestris OX=4096 PE=1 SV=1)

HSP 1 Score: 308.9 bits (790), Expect = 6.8e-83
Identity = 184/325 (56.62%), Postives = 221/325 (68.00%), Query Frame = 0


Query: 11  KPLSKP-----DSCFLSLPSLFTGRPPHTFLSFP---SKFIPFH-LSSSSSHSSCFSPSK 70
           KP+ KP     +SC +SLP LF         ++P   +   P   L  S ++S C    K
Sbjct: 6   KPIIKPSSMATNSCLISLPPLFATTTKSKSFAYPYLSNTLKPIKLLHLSCTYSPCILSPK 65

Query: 71  KKPHLPSVAQTSDWAQEDETITIDPKLGNDEGAEEEDGPHWENEELSETESRISAWEGEG 130
           KK         S   +E+ T+ +D       G  +E G  +  E   E        E  G
Sbjct: 66  KK------TSVSALQEEENTLILD-------GQGQESGDLFNFEPSGEETEEEGFVEAVG 125

Query: 131 EDGGSEAEVGGDEEEEVEGPYEEPNEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVI 190
            D G   EV  DEEEE    ++EP EDAKLFVGNLPYDVDSE LA LFE+AG VEIAEVI
Sbjct: 126 -DAGESDEVEADEEEE---EFQEPPEDAKLFVGNLPYDVDSEGLARLFEQAGVVEIAEVI 185

Query: 191 YNRETDRSRGFGFVTMSTVEEAEKAVDTFNRYELSGRLLTVNKAAPRGSRQEREPRTFQS 250
           YNR+TD+SRGFGFVTMSTVEEAEKAV+ +NRY+++GRLLTVNKAA RG R ER PRTF+ 
Sbjct: 186 YNRDTDQSRGFGFVTMSTVEEAEKAVEMYNRYDVNGRLLTVNKAARRGERPERPPRTFEQ 245

Query: 251 TFRIYVGNLPWDVDNARLEQVFSEHGKVVDARVLYDRDSGRSRGFGFVTMADETGMNDAI 310
           ++RIYVGN+PW +D+ARLEQ+FSEHGKVV ARV+YDR++GRSRGFGFVTMA E  M+DAI
Sbjct: 246 SYRIYVGNIPWGIDDARLEQLFSEHGKVVSARVVYDRETGRSRGFGFVTMASEAEMSDAI 305

Query: 311 AALDGQSLEGRAIRVNVAEERPRRN 327
           A LDGQSL+GR IRVNVAE+R RRN
Sbjct: 306 ANLDGQSLDGRTIRVNVAEDRSRRN 313

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BLAST of PI0011324 vs. ExPASy Swiss-Prot
Match: P19682 (28 kDa ribonucleoprotein, chloroplastic OS=Nicotiana sylvestris OX=4096 PE=1 SV=1)

HSP 1 Score: 300.8 bits (769), Expect = 1.8e-80
Identity = 172/310 (55.48%), Postives = 212/310 (68.39%), Query Frame = 0


Query: 17  DSCFLSLPSLFTGRPPHTFLSFPSKFIPFHLSSSSSHSSCFSPSKKKPHLPSVAQTSDWA 76
           + C +SLP  FT     +   F S  +   +S SSS  +  S +K+    P+    S  +
Sbjct: 4   NGCLISLPPFFTTTKSISSYPFLSTQLK-PISLSSSLPTLLSLNKRTTQFPTF--VSVLS 63

Query: 77  QEDETITIDPKLGNDEGAEEEDGPHWENEELSETESRISAWEGEGEDGGSEAEVGGDEEE 136
           ++D T+ +D                                  + E GG      G+  E
Sbjct: 64  EDDNTLVLD----------------------------------DQEQGGDFPSFVGEAGE 123

Query: 137 EVEGPYEEPNEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVT 196
             E  Y+EP+EDAKLFVGNLPYD+DSE LA LF++AG VEIAEVIYNRETDRSRGFGFVT
Sbjct: 124 TEE--YQEPSEDAKLFVGNLPYDIDSEGLAQLFQQAGVVEIAEVIYNRETDRSRGFGFVT 183

Query: 197 MSTVEEAEKAVDTFNRYELSGRLLTVNKAAPRGSRQEREPRTFQSTFRIYVGNLPWDVDN 256
           MSTVEEA+KAV+ +++Y+L+GRLLTVNKAAPRGSR ER PRTFQ T+RIYVGN+PWD+D+
Sbjct: 184 MSTVEEADKAVELYSQYDLNGRLLTVNKAAPRGSRPERAPRTFQPTYRIYVGNIPWDIDD 243

Query: 257 ARLEQVFSEHGKVVDARVLYDRDSGRSRGFGFVTMADETGMNDAIAALDGQSLEGRAIRV 316
           ARLEQVFSEHGKVV ARV++DR+SGRSRGFGFVTM+ E  M++AIA LDGQ+L+GR IRV
Sbjct: 244 ARLEQVFSEHGKVVSARVVFDRESGRSRGFGFVTMSSEAEMSEAIANLDGQTLDGRTIRV 274

Query: 317 NVAEERPRRN 327
           N AEERPRRN
Sbjct: 304 NAAEERPRRN 274

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BLAST of PI0011324 vs. ExPASy Swiss-Prot
Match: Q9FGS0 (RNA-binding protein CP31B, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CP31B PE=1 SV=1)

HSP 1 Score: 291.6 bits (745), Expect = 1.1e-77
Identity = 164/281 (58.36%), Postives = 201/281 (71.53%), Query Frame = 0


Query: 45  FHLSSSSSHSSCFSPSKKKPHLPSVAQTSDWAQEDETITIDPKLGNDEGAEEEDGPHWEN 104
           F++SSS SH   FS S +  +L    ++         +T   +  N   AEEE+G     
Sbjct: 30  FNISSSESHRFNFSLSSRPVNLTLSLKSKTLRNSSPVVTFVSQTSN--WAEEEEGE---- 89

Query: 105 EELSETESRISAWEGEGEDGGSEAEVGGDEEEEVEGPYEEPNEDAKLFVGNLPYDVDSEK 164
                          +G  GG+   V    E E    + EP E+AKLFVGNLPYDVDS+ 
Sbjct: 90  ---------------DGSIGGTSVTVDESFESEDGVGFPEPPEEAKLFVGNLPYDVDSQA 149

Query: 165 LAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVDTFNRYELSGRLLTVNK 224
           LAMLFE+AGTVEI+EVIYNR+TD+SRGFGFVTMSTVEEAEKAV+ FN +E++GR LTVN+
Sbjct: 150 LAMLFEQAGTVEISEVIYNRDTDQSRGFGFVTMSTVEEAEKAVEKFNSFEVNGRRLTVNR 209

Query: 225 AAPRGSRQEREPRTFQSTFRIYVGNLPWDVDNARLEQVFSEHGKVVDARVLYDRDSGRSR 284
           AAPRGSR ER+PR + + FRIYVGNLPWDVD+ RLE++FSEHGKVVDARV+ DR++GRSR
Sbjct: 210 AAPRGSRPERQPRVYDAAFRIYVGNLPWDVDSGRLERLFSEHGKVVDARVVSDRETGRSR 269

Query: 285 GFGFVTMADETGMNDAIAALDGQSLEGRAIRVNVAEERPRR 326
           GFGFV M++E  +N AIAALDGQ+LEGRAI+VNVAEER RR
Sbjct: 270 GFGFVQMSNENEVNVAIAALDGQNLEGRAIKVNVAEERTRR 289

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BLAST of PI0011324 vs. ExPASy Swiss-Prot
Match: P28644 (28 kDa ribonucleoprotein, chloroplastic OS=Spinacia oleracea OX=3562 PE=1 SV=1)

HSP 1 Score: 288.1 bits (736), Expect = 1.2e-76
Identity = 161/260 (61.92%), Postives = 188/260 (72.31%), Query Frame = 0


Query: 69  VAQTSDWAQEDETITIDPKLGNDEGAEEEDGPHWENEELSETESRISAWEGEGEDGGSEA 128
           VAQTS+W QE  T  +     + EGA                     +W       GSE 
Sbjct: 2   VAQTSEWEQEGSTNAVLEGESDPEGA--------------------VSW-------GSET 61

Query: 129 EVGGDEEEEVEGPYEEPNEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDR 188
           +V  +   E    + EP E+AKLFVGNLPYDVDSEKLA +F+ AG VEIAEVIYNRETDR
Sbjct: 62  QVSDEGGVEGGQGFSEPPEEAKLFVGNLPYDVDSEKLAGIFDAAGVVEIAEVIYNRETDR 121

Query: 189 SRGFGFVTMSTVEEAEKAVDTFNRYELSGRLLTVNKAAPRGSRQEREPR-TFQSTFRIYV 248
           SRGFGFVTMSTVEEAEKAV+  N Y++ GR LTVNKAAPRGS  ER PR  F+ + R+YV
Sbjct: 122 SRGFGFVTMSTVEEAEKAVELLNGYDMDGRQLTVNKAAPRGS-PERAPRGDFEPSCRVYV 181

Query: 249 GNLPWDVDNARLEQVFSEHGKVVDARVLYDRDSGRSRGFGFVTMADETGMNDAIAALDGQ 308
           GNLPWDVD +RLEQ+FSEHGKVV ARV+ DR++GRSRGFGFVTM+ E+ +NDAIAALDGQ
Sbjct: 182 GNLPWDVDTSRLEQLFSEHGKVVSARVVSDRETGRSRGFGFVTMSSESEVNDAIAALDGQ 233

Query: 309 SLEGRAIRVNVAEERPRRNF 328
           +L+GRA+RVNVAEERPRR F
Sbjct: 242 TLDGRAVRVNVAEERPRRAF 233

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BLAST of PI0011324 vs. ExPASy TrEMBL
Match: A0A5D3BIH5 (28 kDa ribonucleoprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold350G00930 PE=4 SV=1)

HSP 1 Score: 608.2 bits (1567), Expect = 2.0e-170
Identity = 312/330 (94.55%), Postives = 318/330 (96.36%), Query Frame = 0


Query: 1   MASTSATSVFKPLSKPDSCFLSLPSLFTGRPPHTFLSFPSKFIPFHLSSSSSHSSCFSPS 60
           MASTSATS+FKPLSKPDSCFLSLPSLFTGRPPHTFLSFPSKFIPFHLSSSSSHSSCF PS
Sbjct: 1   MASTSATSLFKPLSKPDSCFLSLPSLFTGRPPHTFLSFPSKFIPFHLSSSSSHSSCFYPS 60

Query: 61  KKKPHLPSVAQTSDWAQEDETITIDPKLGNDEGAEEEDGPHWENEELSETESRISAWEGE 120
           KKKPHLPSVAQTSDWAQED+T+TIDPKL NDE AEEE GPHWENEELSETESRIS WEGE
Sbjct: 61  KKKPHLPSVAQTSDWAQEDDTMTIDPKLDNDEDAEEEGGPHWENEELSETESRISDWEGE 120

Query: 121 GEDGGSEAEVGGDEEEEVE---GPYEEPNEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEI 180
           GEDGGSEAEVGGDEEEE E   GPYEEPNEDAKLFVGNLPYD+DSEKLAMLFEKAGTVEI
Sbjct: 121 GEDGGSEAEVGGDEEEEEEGEQGPYEEPNEDAKLFVGNLPYDIDSEKLAMLFEKAGTVEI 180

Query: 181 AEVIYNRETDRSRGFGFVTMSTVEEAEKAVDTFNRYELSGRLLTVNKAAPRGSRQEREPR 240
           AEVIYNRETDRSRGFGFVTMSTVEEAEKAVDTFNRYELSGRLLTVNKAAPRG+RQER+PR
Sbjct: 181 AEVIYNRETDRSRGFGFVTMSTVEEAEKAVDTFNRYELSGRLLTVNKAAPRGTRQERQPR 240

Query: 241 TFQSTFRIYVGNLPWDVDNARLEQVFSEHGKVVDARVLYDRDSGRSRGFGFVTMADETGM 300
            FQ  FRIYVGNLPWDVDNARLEQVFSEHGKVVDARVLYDRDSGRSRGFGFVTMADETGM
Sbjct: 241 PFQPAFRIYVGNLPWDVDNARLEQVFSEHGKVVDARVLYDRDSGRSRGFGFVTMADETGM 300

Query: 301 NDAIAALDGQSLEGRAIRVNVAEERPRRNF 328
           NDAIAALDGQSLEGRAIRVNVAEERPRRNF
Sbjct: 301 NDAIAALDGQSLEGRAIRVNVAEERPRRNF 330

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BLAST of PI0011324 vs. ExPASy TrEMBL
Match: A0A5A7USX4 (Ribonucleoprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G00900 PE=4 SV=1)

HSP 1 Score: 599.4 bits (1544), Expect = 9.3e-168
Identity = 310/331 (93.66%), Postives = 317/331 (95.77%), Query Frame = 0


Query: 1   MASTSATSVFKPLSKPDSCFLSLPSLFTGRPPHTFLSFPSKFIPFHLSSSSSHSSCFSPS 60
           MASTSATS+FK LSKPDSCFLSLPSLFTGRPPHTFLSFPSKFIPFHLSSSSSHSSCF PS
Sbjct: 1   MASTSATSLFKTLSKPDSCFLSLPSLFTGRPPHTFLSFPSKFIPFHLSSSSSHSSCFYPS 60

Query: 61  KKKPHLPSVAQTSDWAQEDETITIDPKLGNDEGAEEEDGPHWENEELSETESRISAW--E 120
           KKKPHLPSVAQTSDWAQED+T+TIDPKL NDE AEEE GPHWENEELSETESRIS W  E
Sbjct: 61  KKKPHLPSVAQTSDWAQEDDTMTIDPKLDNDEDAEEEGGPHWENEELSETESRISDWEGE 120

Query: 121 GEGEDGGSEAEVGGDEEEE--VEGPYEEPNEDAKLFVGNLPYDVDSEKLAMLFEKAGTVE 180
           GEGEDGGSEAEVGGDEEEE   +GPYEEPNEDAKLFVGNLPYD+DSEKLAMLFEKAGTVE
Sbjct: 121 GEGEDGGSEAEVGGDEEEEEGEQGPYEEPNEDAKLFVGNLPYDIDSEKLAMLFEKAGTVE 180

Query: 181 IAEVIYNRETDRSRGFGFVTMSTVEEAEKAVDTFNRYELSGRLLTVNKAAPRGSRQEREP 240
           IAEVIYNRETDRSRGFGFVTMSTVEEAEKAVDTFNRYELSGRLLTVNKAAPRG+RQER+P
Sbjct: 181 IAEVIYNRETDRSRGFGFVTMSTVEEAEKAVDTFNRYELSGRLLTVNKAAPRGTRQERQP 240

Query: 241 RTFQSTFRIYVGNLPWDVDNARLEQVFSEHGKVVDARVLYDRDSGRSRGFGFVTMADETG 300
           R FQ  FRIYVGNLPWDVDNARLEQVFSEHGKVVDARVLYDRDSGRSRGFGFVTMADETG
Sbjct: 241 RPFQPAFRIYVGNLPWDVDNARLEQVFSEHGKVVDARVLYDRDSGRSRGFGFVTMADETG 300

Query: 301 MNDAIAALDGQSLEGRAIRVNVAEERPRRNF 328
           MNDAIAALDGQSLEGRAIRVNVAEERPRRNF
Sbjct: 301 MNDAIAALDGQSLEGRAIRVNVAEERPRRNF 331

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BLAST of PI0011324 vs. ExPASy TrEMBL
Match: A0A0A0LNS8 (Ribonucleoprotein OS=Cucumis sativus OX=3659 GN=Csa_1G002890 PE=4 SV=1)

HSP 1 Score: 597.4 bits (1539), Expect = 3.5e-167
Identity = 307/330 (93.03%), Postives = 316/330 (95.76%), Query Frame = 0


Query: 1   MASTSATSVFKPLSKPDSCFLSLPSLFTGRPPHTFLSFPSKFIPFHLSSSSSHSSCFSPS 60
           MAS+SATS+FKPLSKPDSCFLSLPSLFTGRPPHTFLSFPSKFIPFHLSSSSS+SS FSPS
Sbjct: 74  MASSSATSLFKPLSKPDSCFLSLPSLFTGRPPHTFLSFPSKFIPFHLSSSSSYSSGFSPS 133

Query: 61  KKKPHLPSVAQTSDWAQEDETITIDPKLGNDEGAEEEDGPHWENEELSETESRISAWEGE 120
           KKKPHLPSVAQTSDWAQED+TITIDPKL NDE   EE GPHWENEELSETESRIS WEGE
Sbjct: 134 KKKPHLPSVAQTSDWAQEDDTITIDPKLDNDENGGEEGGPHWENEELSETESRISDWEGE 193

Query: 121 GEDGGSEAEVGGDEEEEVE---GPYEEPNEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEI 180
           GEDGGSEAEVGGDEEE+ E   GPYEEPNEDAKLFVGNLPYD+DSEKLAMLFEKAGTVEI
Sbjct: 194 GEDGGSEAEVGGDEEEDEEGEQGPYEEPNEDAKLFVGNLPYDIDSEKLAMLFEKAGTVEI 253

Query: 181 AEVIYNRETDRSRGFGFVTMSTVEEAEKAVDTFNRYELSGRLLTVNKAAPRGSRQEREPR 240
           AEVIYNRETDRSRGFGFVTMSTVEEAEKAVDTFNRY+LSGRLLTVNKAAPRGSRQEREPR
Sbjct: 254 AEVIYNRETDRSRGFGFVTMSTVEEAEKAVDTFNRYDLSGRLLTVNKAAPRGSRQEREPR 313

Query: 241 TFQSTFRIYVGNLPWDVDNARLEQVFSEHGKVVDARVLYDRDSGRSRGFGFVTMADETGM 300
            FQ TFRIYVGNLPWDVDN RLEQ+FSEHGKVVDARVLYDRDSGRSRGFGFVTMADETGM
Sbjct: 314 PFQPTFRIYVGNLPWDVDNGRLEQLFSEHGKVVDARVLYDRDSGRSRGFGFVTMADETGM 373

Query: 301 NDAIAALDGQSLEGRAIRVNVAEERPRRNF 328
           NDAIAALDGQSL+GRAIRVNVAEERPRRNF
Sbjct: 374 NDAIAALDGQSLDGRAIRVNVAEERPRRNF 403

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BLAST of PI0011324 vs. ExPASy TrEMBL
Match: A0A6J1C316 (28 kDa ribonucleoprotein, chloroplastic-like OS=Momordica charantia OX=3673 GN=LOC111006981 PE=4 SV=1)

HSP 1 Score: 538.1 bits (1385), Expect = 2.5e-149
Identity = 288/337 (85.46%), Postives = 303/337 (89.91%), Query Frame = 0


Query: 1   MASTSATSVFKPLSKPDSCFLSLPSLFTGRPPHTFLSFPSKFIPFHLSSSSSHSSCFSPS 60
           MASTSATS+ KPLSK DSC LSLPS+FT RPPH+FLSFPSK I FHL SSSSHSS FS S
Sbjct: 1   MASTSATSILKPLSKADSCLLSLPSVFTCRPPHSFLSFPSKLIRFHL-SSSSHSSPFSLS 60

Query: 61  KKKPHLPS----VAQTSDWAQEDETITIDPKLGNDEGAEEEDGPHWENEELSETESRISA 120
           KKKPH  S    VAQTSDWAQED+TITIDPKLG DE  E+E GPHWEN+ELSETESRIS 
Sbjct: 61  KKKPHPSSLVSFVAQTSDWAQEDDTITIDPKLGGDEEEEDEQGPHWENQELSETESRISD 120

Query: 121 WEGEGEDGGSEAE----VGG--DEEEEVEGPYEEPNEDAKLFVGNLPYDVDSEKLAMLFE 180
           WEGE EDGGSEAE     GG  +EEEE EG YEEPNEDAKLFVGNLPYDVDS+KLAM+F 
Sbjct: 121 WEGEAEDGGSEAEGEDGEGGLLEEEEEEEGSYEEPNEDAKLFVGNLPYDVDSQKLAMIFG 180

Query: 181 KAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVDTFNRYELSGRLLTVNKAAPRGS 240
           KAGTVEIAEVIYNRETD+SRGFGFVTMSTVEEAEKAVDTFNRYEL GRLLTVNKAAPRG+
Sbjct: 181 KAGTVEIAEVIYNRETDQSRGFGFVTMSTVEEAEKAVDTFNRYELEGRLLTVNKAAPRGA 240

Query: 241 RQEREPRTFQSTFRIYVGNLPWDVDNARLEQVFSEHGKVVDARVLYDRDSGRSRGFGFVT 300
           R ER PRTFQS+FRIYVGNLPWDVDNARLEQVFSEHGKVV+ARVLYDRD+GRSRGFGFVT
Sbjct: 241 RPERTPRTFQSSFRIYVGNLPWDVDNARLEQVFSEHGKVVEARVLYDRDTGRSRGFGFVT 300

Query: 301 MADETGMNDAIAALDGQSLEGRAIRVNVAEERPRRNF 328
           MADETGMNDAIAALDGQSL+GRAIRVNVAEERPRRNF
Sbjct: 301 MADETGMNDAIAALDGQSLDGRAIRVNVAEERPRRNF 336

[Close]

BLAST of PI0011324 vs. ExPASy TrEMBL
Match: A0A6J1JFY1 (28 kDa ribonucleoprotein, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111484771 PE=4 SV=1)

HSP 1 Score: 493.4 bits (1269), Expect = 7.2e-136
Identity = 270/338 (79.88%), Postives = 290/338 (85.80%), Query Frame = 0


Query: 1   MASTSATSVFKPLSKPDSCFLSLPSLFTGRPPHTFLSFPSKF--IPFHLSSSSSHSSCFS 60
           MAS+SATS+ KPLSK DSC LSLPSLFT RPPH+FLSFPSKF   PFHLSSS   SS FS
Sbjct: 1   MASSSATSILKPLSKADSCLLSLPSLFTCRPPHSFLSFPSKFTTAPFHLSSSHC-SSLFS 60

Query: 61  PSKKKPHL----PSVAQTSDWAQEDETITIDPKLGNDEGAEEEDGPHWENEELSETESRI 120
            SKKK HL     SVAQ+S+W QED+TITIDPKL  DE  EE  GPHWEN+ELSE ESRI
Sbjct: 61  SSKKKTHLLSLVASVAQSSEWGQEDDTITIDPKLSGDEDGEE--GPHWENQELSENESRI 120

Query: 121 SAWEGEGE---DGGSEAEVGGDEE--EEVEGPYEEPNEDAKLFVGNLPYDVDSEKLAMLF 180
           S WEGEGE   DGGSE E GG  E  +E EGP EEPNEDAKL+VGNL YDVDS+KLAMLF
Sbjct: 121 SDWEGEGEGEDDGGSEGEGGGVLELGDEEEGPLEEPNEDAKLYVGNLSYDVDSQKLAMLF 180

Query: 181 EKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVDTFNRYELSGRLLTVNKAAPRG 240
           EKAGTVEIAEVIY+R++DRSRGFGFVTMS+VEEAEKAVDTFNRYE  GR L VNKAA RG
Sbjct: 181 EKAGTVEIAEVIYDRQSDRSRGFGFVTMSSVEEAEKAVDTFNRYEFLGRTLVVNKAAARG 240

Query: 241 SRQEREPRTFQSTFRIYVGNLPWDVDNARLEQVFSEHGKVVDARVLYDRDSGRSRGFGFV 300
           SR ER+PRTFQ  FRIYVGNL W+VD+ARLEQVFSEHGKVVDARVLYDRDSGRSRGFGFV
Sbjct: 241 SRPERQPRTFQPAFRIYVGNLAWEVDSARLEQVFSEHGKVVDARVLYDRDSGRSRGFGFV 300

Query: 301 TMADETGMNDAIAALDGQSLEGRAIRVNVAEERPRRNF 328
           TMADETGMNDAIAALDGQS++GRAIRVNVAEE+PRRNF
Sbjct: 301 TMADETGMNDAIAALDGQSVDGRAIRVNVAEEKPRRNF 335

[Close]

BLAST of PI0011324 vs. NCBI nr
Match: TYJ98491.1 (28 kDa ribonucleoprotein [Cucumis melo var. makuwa])

HSP 1 Score: 608.2 bits (1567), Expect = 4.1e-170
Identity = 312/330 (94.55%), Postives = 318/330 (96.36%), Query Frame = 0


Query: 1   MASTSATSVFKPLSKPDSCFLSLPSLFTGRPPHTFLSFPSKFIPFHLSSSSSHSSCFSPS 60
           MASTSATS+FKPLSKPDSCFLSLPSLFTGRPPHTFLSFPSKFIPFHLSSSSSHSSCF PS
Sbjct: 1   MASTSATSLFKPLSKPDSCFLSLPSLFTGRPPHTFLSFPSKFIPFHLSSSSSHSSCFYPS 60

Query: 61  KKKPHLPSVAQTSDWAQEDETITIDPKLGNDEGAEEEDGPHWENEELSETESRISAWEGE 120
           KKKPHLPSVAQTSDWAQED+T+TIDPKL NDE AEEE GPHWENEELSETESRIS WEGE
Sbjct: 61  KKKPHLPSVAQTSDWAQEDDTMTIDPKLDNDEDAEEEGGPHWENEELSETESRISDWEGE 120

Query: 121 GEDGGSEAEVGGDEEEEVE---GPYEEPNEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEI 180
           GEDGGSEAEVGGDEEEE E   GPYEEPNEDAKLFVGNLPYD+DSEKLAMLFEKAGTVEI
Sbjct: 121 GEDGGSEAEVGGDEEEEEEGEQGPYEEPNEDAKLFVGNLPYDIDSEKLAMLFEKAGTVEI 180

Query: 181 AEVIYNRETDRSRGFGFVTMSTVEEAEKAVDTFNRYELSGRLLTVNKAAPRGSRQEREPR 240
           AEVIYNRETDRSRGFGFVTMSTVEEAEKAVDTFNRYELSGRLLTVNKAAPRG+RQER+PR
Sbjct: 181 AEVIYNRETDRSRGFGFVTMSTVEEAEKAVDTFNRYELSGRLLTVNKAAPRGTRQERQPR 240

Query: 241 TFQSTFRIYVGNLPWDVDNARLEQVFSEHGKVVDARVLYDRDSGRSRGFGFVTMADETGM 300
            FQ  FRIYVGNLPWDVDNARLEQVFSEHGKVVDARVLYDRDSGRSRGFGFVTMADETGM
Sbjct: 241 PFQPAFRIYVGNLPWDVDNARLEQVFSEHGKVVDARVLYDRDSGRSRGFGFVTMADETGM 300

Query: 301 NDAIAALDGQSLEGRAIRVNVAEERPRRNF 328
           NDAIAALDGQSLEGRAIRVNVAEERPRRNF
Sbjct: 301 NDAIAALDGQSLEGRAIRVNVAEERPRRNF 330

[Close]

BLAST of PI0011324 vs. NCBI nr
Match: KAA0057807.1 (Ribonucleoprotein [Cucumis melo var. makuwa])

HSP 1 Score: 599.4 bits (1544), Expect = 1.9e-167
Identity = 310/331 (93.66%), Postives = 317/331 (95.77%), Query Frame = 0


Query: 1   MASTSATSVFKPLSKPDSCFLSLPSLFTGRPPHTFLSFPSKFIPFHLSSSSSHSSCFSPS 60
           MASTSATS+FK LSKPDSCFLSLPSLFTGRPPHTFLSFPSKFIPFHLSSSSSHSSCF PS
Sbjct: 1   MASTSATSLFKTLSKPDSCFLSLPSLFTGRPPHTFLSFPSKFIPFHLSSSSSHSSCFYPS 60

Query: 61  KKKPHLPSVAQTSDWAQEDETITIDPKLGNDEGAEEEDGPHWENEELSETESRISAW--E 120
           KKKPHLPSVAQTSDWAQED+T+TIDPKL NDE AEEE GPHWENEELSETESRIS W  E
Sbjct: 61  KKKPHLPSVAQTSDWAQEDDTMTIDPKLDNDEDAEEEGGPHWENEELSETESRISDWEGE 120

Query: 121 GEGEDGGSEAEVGGDEEEE--VEGPYEEPNEDAKLFVGNLPYDVDSEKLAMLFEKAGTVE 180
           GEGEDGGSEAEVGGDEEEE   +GPYEEPNEDAKLFVGNLPYD+DSEKLAMLFEKAGTVE
Sbjct: 121 GEGEDGGSEAEVGGDEEEEEGEQGPYEEPNEDAKLFVGNLPYDIDSEKLAMLFEKAGTVE 180

Query: 181 IAEVIYNRETDRSRGFGFVTMSTVEEAEKAVDTFNRYELSGRLLTVNKAAPRGSRQEREP 240
           IAEVIYNRETDRSRGFGFVTMSTVEEAEKAVDTFNRYELSGRLLTVNKAAPRG+RQER+P
Sbjct: 181 IAEVIYNRETDRSRGFGFVTMSTVEEAEKAVDTFNRYELSGRLLTVNKAAPRGTRQERQP 240

Query: 241 RTFQSTFRIYVGNLPWDVDNARLEQVFSEHGKVVDARVLYDRDSGRSRGFGFVTMADETG 300
           R FQ  FRIYVGNLPWDVDNARLEQVFSEHGKVVDARVLYDRDSGRSRGFGFVTMADETG
Sbjct: 241 RPFQPAFRIYVGNLPWDVDNARLEQVFSEHGKVVDARVLYDRDSGRSRGFGFVTMADETG 300

Query: 301 MNDAIAALDGQSLEGRAIRVNVAEERPRRNF 328
           MNDAIAALDGQSLEGRAIRVNVAEERPRRNF
Sbjct: 301 MNDAIAALDGQSLEGRAIRVNVAEERPRRNF 331

[Close]

BLAST of PI0011324 vs. NCBI nr
Match: XP_004138078.1 (28 kDa ribonucleoprotein, chloroplastic [Cucumis sativus] >KAE8652388.1 hypothetical protein Csa_013384 [Cucumis sativus])

HSP 1 Score: 597.4 bits (1539), Expect = 7.3e-167
Identity = 307/330 (93.03%), Postives = 316/330 (95.76%), Query Frame = 0


Query: 1   MASTSATSVFKPLSKPDSCFLSLPSLFTGRPPHTFLSFPSKFIPFHLSSSSSHSSCFSPS 60
           MAS+SATS+FKPLSKPDSCFLSLPSLFTGRPPHTFLSFPSKFIPFHLSSSSS+SS FSPS
Sbjct: 1   MASSSATSLFKPLSKPDSCFLSLPSLFTGRPPHTFLSFPSKFIPFHLSSSSSYSSGFSPS 60

Query: 61  KKKPHLPSVAQTSDWAQEDETITIDPKLGNDEGAEEEDGPHWENEELSETESRISAWEGE 120
           KKKPHLPSVAQTSDWAQED+TITIDPKL NDE   EE GPHWENEELSETESRIS WEGE
Sbjct: 61  KKKPHLPSVAQTSDWAQEDDTITIDPKLDNDENGGEEGGPHWENEELSETESRISDWEGE 120

Query: 121 GEDGGSEAEVGGDEEEEVE---GPYEEPNEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEI 180
           GEDGGSEAEVGGDEEE+ E   GPYEEPNEDAKLFVGNLPYD+DSEKLAMLFEKAGTVEI
Sbjct: 121 GEDGGSEAEVGGDEEEDEEGEQGPYEEPNEDAKLFVGNLPYDIDSEKLAMLFEKAGTVEI 180

Query: 181 AEVIYNRETDRSRGFGFVTMSTVEEAEKAVDTFNRYELSGRLLTVNKAAPRGSRQEREPR 240
           AEVIYNRETDRSRGFGFVTMSTVEEAEKAVDTFNRY+LSGRLLTVNKAAPRGSRQEREPR
Sbjct: 181 AEVIYNRETDRSRGFGFVTMSTVEEAEKAVDTFNRYDLSGRLLTVNKAAPRGSRQEREPR 240

Query: 241 TFQSTFRIYVGNLPWDVDNARLEQVFSEHGKVVDARVLYDRDSGRSRGFGFVTMADETGM 300
            FQ TFRIYVGNLPWDVDN RLEQ+FSEHGKVVDARVLYDRDSGRSRGFGFVTMADETGM
Sbjct: 241 PFQPTFRIYVGNLPWDVDNGRLEQLFSEHGKVVDARVLYDRDSGRSRGFGFVTMADETGM 300

Query: 301 NDAIAALDGQSLEGRAIRVNVAEERPRRNF 328
           NDAIAALDGQSL+GRAIRVNVAEERPRRNF
Sbjct: 301 NDAIAALDGQSLDGRAIRVNVAEERPRRNF 330

[Close]

BLAST of PI0011324 vs. NCBI nr
Match: XP_038878997.1 (28 kDa ribonucleoprotein, chloroplastic-like [Benincasa hispida])

HSP 1 Score: 561.2 bits (1445), Expect = 5.8e-156
Identity = 298/330 (90.30%), Postives = 308/330 (93.33%), Query Frame = 0


Query: 1   MASTSATSVFKPLSKPDSCFLSLPSLFTGRPPHTFLSFPSKFIPFHLSSSSSHSSCFSPS 60
           MASTSATS+ KPLSKPDSCFLSLPSLFTGRPPHTFLSFPSKFIPF+L  SSSH+S FS S
Sbjct: 1   MASTSATSILKPLSKPDSCFLSLPSLFTGRPPHTFLSFPSKFIPFNL--SSSHTSLFSSS 60

Query: 61  KKKPHLPSVAQTSDWAQEDETITIDPKLGNDEGAEEEDGPHWENEELSETESRISAWEGE 120
           KKK HLPSVAQTSDWAQED+TITIDPKLG+DE AEE  GPHWEN+ELSETESRIS WEGE
Sbjct: 61  KKKTHLPSVAQTSDWAQEDDTITIDPKLGDDEAAEE--GPHWENQELSETESRISDWEGE 120

Query: 121 GE---DGGSEAEVGGDEEEEVEGPYEEPNEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEI 180
            E   DGGSEAE  GDEE   EGPYEEPNEDAKLFVGNLPYDVDS+KLAMLFEKAGTVEI
Sbjct: 121 AEGEDDGGSEAE--GDEE---EGPYEEPNEDAKLFVGNLPYDVDSQKLAMLFEKAGTVEI 180

Query: 181 AEVIYNRETDRSRGFGFVTMSTVEEAEKAVDTFNRYELSGRLLTVNKAAPRGSRQEREPR 240
           AEVIYNRETD+SRGFGFVTMSTVEEAEKAVDTFNRYELSGRLLTVNKAAPRGSR ER+PR
Sbjct: 181 AEVIYNRETDQSRGFGFVTMSTVEEAEKAVDTFNRYELSGRLLTVNKAAPRGSRPERQPR 240

Query: 241 TFQSTFRIYVGNLPWDVDNARLEQVFSEHGKVVDARVLYDRDSGRSRGFGFVTMADETGM 300
           TFQ  FRIYVGNLPWDVDNARLEQVFSEHGKVV+ARVLYDRDSGRSRGFGFVTMADETGM
Sbjct: 241 TFQPAFRIYVGNLPWDVDNARLEQVFSEHGKVVEARVLYDRDSGRSRGFGFVTMADETGM 300

Query: 301 NDAIAALDGQSLEGRAIRVNVAEERPRRNF 328
           NDAIAALDGQSLEGRAIRVNVAEERPRRNF
Sbjct: 301 NDAIAALDGQSLEGRAIRVNVAEERPRRNF 321

[Close]

BLAST of PI0011324 vs. NCBI nr
Match: XP_022134798.1 (28 kDa ribonucleoprotein, chloroplastic-like [Momordica charantia])

HSP 1 Score: 538.1 bits (1385), Expect = 5.2e-149
Identity = 288/337 (85.46%), Postives = 303/337 (89.91%), Query Frame = 0


Query: 1   MASTSATSVFKPLSKPDSCFLSLPSLFTGRPPHTFLSFPSKFIPFHLSSSSSHSSCFSPS 60
           MASTSATS+ KPLSK DSC LSLPS+FT RPPH+FLSFPSK I FHL SSSSHSS FS S
Sbjct: 1   MASTSATSILKPLSKADSCLLSLPSVFTCRPPHSFLSFPSKLIRFHL-SSSSHSSPFSLS 60

Query: 61  KKKPHLPS----VAQTSDWAQEDETITIDPKLGNDEGAEEEDGPHWENEELSETESRISA 120
           KKKPH  S    VAQTSDWAQED+TITIDPKLG DE  E+E GPHWEN+ELSETESRIS 
Sbjct: 61  KKKPHPSSLVSFVAQTSDWAQEDDTITIDPKLGGDEEEEDEQGPHWENQELSETESRISD 120

Query: 121 WEGEGEDGGSEAE----VGG--DEEEEVEGPYEEPNEDAKLFVGNLPYDVDSEKLAMLFE 180
           WEGE EDGGSEAE     GG  +EEEE EG YEEPNEDAKLFVGNLPYDVDS+KLAM+F 
Sbjct: 121 WEGEAEDGGSEAEGEDGEGGLLEEEEEEEGSYEEPNEDAKLFVGNLPYDVDSQKLAMIFG 180

Query: 181 KAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVDTFNRYELSGRLLTVNKAAPRGS 240
           KAGTVEIAEVIYNRETD+SRGFGFVTMSTVEEAEKAVDTFNRYEL GRLLTVNKAAPRG+
Sbjct: 181 KAGTVEIAEVIYNRETDQSRGFGFVTMSTVEEAEKAVDTFNRYELEGRLLTVNKAAPRGA 240

Query: 241 RQEREPRTFQSTFRIYVGNLPWDVDNARLEQVFSEHGKVVDARVLYDRDSGRSRGFGFVT 300
           R ER PRTFQS+FRIYVGNLPWDVDNARLEQVFSEHGKVV+ARVLYDRD+GRSRGFGFVT
Sbjct: 241 RPERTPRTFQSSFRIYVGNLPWDVDNARLEQVFSEHGKVVEARVLYDRDTGRSRGFGFVT 300

Query: 301 MADETGMNDAIAALDGQSLEGRAIRVNVAEERPRRNF 328
           MADETGMNDAIAALDGQSL+GRAIRVNVAEERPRRNF
Sbjct: 301 MADETGMNDAIAALDGQSLDGRAIRVNVAEERPRRNF 336

[Close]

BLAST of PI0011324 vs. TAIR 10
Match: AT4G24770.1 (31-kDa RNA binding protein )

HSP 1 Score: 310.8 bits (795), Expect = 1.3e-84
Identity = 194/337 (57.57%), Postives = 233/337 (69.14%), Query Frame = 0


Query: 1   MASTSATSVFKPLSKPD---SCFLSLPSLFTG------RPPHTFLSFPSKFIPFHLSSSS 60
           MAS+  TS  KPL+  D   S   S PS+ +       R     L      +P   S  S
Sbjct: 1   MASSIVTSSLKPLAMADSSSSTIFSHPSISSTISSSRIRSSSVSLLTGRINLPLSFSRVS 60

Query: 61  SHSSCFSPSKKKPHLPSVAQTSDWAQEDETITIDPKLGNDEGAEEEDGPHWENEELSE-T 120
                 +  KK P +  VAQTSDWA+E          G    A EE     E++++SE  
Sbjct: 61  LSLKTKTHLKKSPFVSFVAQTSDWAEEG---------GEGSVAVEETENSLESQDVSEGD 120

Query: 121 ESRISAWEGEGEDGG-SEAEVG-GDEEEEVEGPYEEPNEDAKLFVGNLPYDVDSEKLAML 180
           ES   A EG+  +G  SE +V  G   E  E P  EP+E+AKLFVGNL YDV+S+ LAML
Sbjct: 121 ESEGDASEGDVSEGDESEGDVSEGAVSERAEFP--EPSEEAKLFVGNLAYDVNSQALAML 180

Query: 181 FEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVDTFNRYELSGRLLTVNKAAPR 240
           FE+AGTVEIAEVIYNRETD+SRGFGFVTMS+V+EAE AV+ FNRY+L+GRLLTVNKAAPR
Sbjct: 181 FEQAGTVEIAEVIYNRETDQSRGFGFVTMSSVDEAETAVEKFNRYDLNGRLLTVNKAAPR 240

Query: 241 GSRQEREPRTFQSTFRIYVGNLPWDVDNARLEQVFSEHGKVVDARVLYDRDSGRSRGFGF 300
           GSR ER PR ++  FR+YVGNLPWDVDN RLEQ+FSEHGKVV+ARV+YDR++GRSRGFGF
Sbjct: 241 GSRPERAPRVYEPAFRVYVGNLPWDVDNGRLEQLFSEHGKVVEARVVYDRETGRSRGFGF 300

Query: 301 VTMADETGMNDAIAALDGQSLEGRAIRVNVAEERPRR 326
           VTM+D   +N+AI+ALDGQ+LEGRAIRVNVAEERP R
Sbjct: 301 VTMSDVDELNEAISALDGQNLEGRAIRVNVAEERPPR 326

[Close]

BLAST of PI0011324 vs. TAIR 10
Match: AT5G50250.1 (chloroplast RNA-binding protein 31B )

HSP 1 Score: 291.6 bits (745), Expect = 8.0e-79
Identity = 164/281 (58.36%), Postives = 201/281 (71.53%), Query Frame = 0


Query: 45  FHLSSSSSHSSCFSPSKKKPHLPSVAQTSDWAQEDETITIDPKLGNDEGAEEEDGPHWEN 104
           F++SSS SH   FS S +  +L    ++         +T   +  N   AEEE+G     
Sbjct: 30  FNISSSESHRFNFSLSSRPVNLTLSLKSKTLRNSSPVVTFVSQTSN--WAEEEEGE---- 89

Query: 105 EELSETESRISAWEGEGEDGGSEAEVGGDEEEEVEGPYEEPNEDAKLFVGNLPYDVDSEK 164
                          +G  GG+   V    E E    + EP E+AKLFVGNLPYDVDS+ 
Sbjct: 90  ---------------DGSIGGTSVTVDESFESEDGVGFPEPPEEAKLFVGNLPYDVDSQA 149

Query: 165 LAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVDTFNRYELSGRLLTVNK 224
           LAMLFE+AGTVEI+EVIYNR+TD+SRGFGFVTMSTVEEAEKAV+ FN +E++GR LTVN+
Sbjct: 150 LAMLFEQAGTVEISEVIYNRDTDQSRGFGFVTMSTVEEAEKAVEKFNSFEVNGRRLTVNR 209

Query: 225 AAPRGSRQEREPRTFQSTFRIYVGNLPWDVDNARLEQVFSEHGKVVDARVLYDRDSGRSR 284
           AAPRGSR ER+PR + + FRIYVGNLPWDVD+ RLE++FSEHGKVVDARV+ DR++GRSR
Sbjct: 210 AAPRGSRPERQPRVYDAAFRIYVGNLPWDVDSGRLERLFSEHGKVVDARVVSDRETGRSR 269

Query: 285 GFGFVTMADETGMNDAIAALDGQSLEGRAIRVNVAEERPRR 326
           GFGFV M++E  +N AIAALDGQ+LEGRAI+VNVAEER RR
Sbjct: 270 GFGFVQMSNENEVNVAIAALDGQNLEGRAIKVNVAEERTRR 289

[Close]

BLAST of PI0011324 vs. TAIR 10
Match: AT2G37220.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 198.4 bits (503), Expect = 9.2e-51
Identity = 115/220 (52.27%), Postives = 140/220 (63.64%), Query Frame = 0


Query: 126 SEAEVGGDEEEEVEGPYEEP-NEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNR 185
           SE EV  D   +V  P E+  + D KLFVGNLP++VDS +LA LFE AG VE+ EVIY++
Sbjct: 67  SEFEVEEDGFADVAPPKEQSFSADLKLFVGNLPFNVDSAQLAQLFESAGNVEMVEVIYDK 126

Query: 186 ETDRSRGFGFVTMSTVEEAEKAVDTFNRYELSGRLLTVNKAAPRGSRQEREPRTFQSTF- 245
            T RSRGFGFVTMS+V E E A   FN YEL GR L VN   P   R++   R  +S+F 
Sbjct: 127 ITGRSRGFGFVTMSSVSEVEAAAQQFNGYELDGRPLRVNAGPPPPKREDGFSRGPRSSFG 186

Query: 246 ------------------RIYVGNLPWDVDNARLEQVFSEHGKVVDARVLYDRDSGRSRG 305
                             R+YVGNL W VD+  LE +FSE GKVV+ARV+YDRDSGRS+G
Sbjct: 187 SSGSGYGGGGGSGAGSGNRVYVGNLSWGVDDMALESLFSEQGKVVEARVIYDRDSGRSKG 246

Query: 306 FGFVTMADETGMNDAIAALDGQSLEGRAIRVNVAEERPRR 326
           FGFVT      + +AI +LDG  L+GR IRV+ AE RP R
Sbjct: 247 FGFVTYDSSQEVQNAIKSLDGADLDGRQIRVSEAEARPPR 286

[Close]

BLAST of PI0011324 vs. TAIR 10
Match: AT3G53460.1 (chloroplast RNA-binding protein 29 )

HSP 1 Score: 165.6 bits (418), Expect = 6.6e-41
Identity = 140/391 (35.81%), Postives = 177/391 (45.27%), Query Frame = 0


Query: 2   ASTSATSVFKPLSKPDSCFLSLPSLFTGRPPHTFLSFPSKFIPFHLSS--SSSHSSCFSP 61
           AS S+ S F P S P    +S P+  +  PP   LSF  K    HL S  +SS   C SP
Sbjct: 3   ASASSLSAFNPKSLP--LCVSRPASVSVLPPS--LSF--KLHSDHLVSIFASSALKCSSP 62

Query: 62  SK-KKPHLPSVAQTSDWAQEDETITIDPKLGNDEGAEEEDGPHWENEELSETESRISAWE 121
           ++     + +VA +SD+  E++ +  D                                 
Sbjct: 63  AEYPSRFVRNVAVSSDFEVEEDDMFAD--------------------------------- 122

Query: 122 GEGEDGGSEAEVGGDEEEEVEGPYEEPNEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIA 181
                        GD+   VE     P  D KLFVGNL ++VDS +LA LFE AG VE+ 
Sbjct: 123 -------------GDDSAPVERNSFSP--DLKLFVGNLSFNVDSAQLAQLFESAGNVEMV 182

Query: 182 EVIYNRETDRSRGFGFVTMSTVEEAEKAVDTFNRYELSGRLLTVNKAAPRGSRQE---RE 241
           EVIY++ T RSRGFGFVTMST  E E A   FN YE  GR L VN   P   R+E   R 
Sbjct: 183 EVIYDKVTGRSRGFGFVTMSTAAEVEAAAQQFNGYEFEGRPLRVNAGPPPPKREESFSRG 242

Query: 242 PRT--------------------------------------------------------- 301
           PR+                                                         
Sbjct: 243 PRSGGYGSERGGGYGSERGGGYGSERGGGYGSERGGGYGSQRSGGGYGGSQRSSYGSGSG 302

Query: 302 ----FQSTFRIYVGNLPWDVDNARLEQVFSEHGKVVDARVLYDRDSGRSRGFGFVTMADE 326
                 S  R+YVGNL W VD+  LE +F+E GKVV+ARV+YDRDSGRS+GFGFVT++  
Sbjct: 303 SGSGSGSGNRLYVGNLSWGVDDMALENLFNEQGKVVEARVIYDRDSGRSKGFGFVTLSSS 339

[Close]

BLAST of PI0011324 vs. TAIR 10
Match: AT3G53460.2 (chloroplast RNA-binding protein 29 )

HSP 1 Score: 165.6 bits (418), Expect = 6.6e-41
Identity = 140/391 (35.81%), Postives = 177/391 (45.27%), Query Frame = 0


Query: 2   ASTSATSVFKPLSKPDSCFLSLPSLFTGRPPHTFLSFPSKFIPFHLSS--SSSHSSCFSP 61
           AS S+ S F P S P    +S P+  +  PP   LSF  K    HL S  +SS   C SP
Sbjct: 3   ASASSLSAFNPKSLP--LCVSRPASVSVLPPS--LSF--KLHSDHLVSIFASSALKCSSP 62

Query: 62  SK-KKPHLPSVAQTSDWAQEDETITIDPKLGNDEGAEEEDGPHWENEELSETESRISAWE 121
           ++     + +VA +SD+  E++ +  D                                 
Sbjct: 63  AEYPSRFVRNVAVSSDFEVEEDDMFAD--------------------------------- 122

Query: 122 GEGEDGGSEAEVGGDEEEEVEGPYEEPNEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIA 181
                        GD+   VE     P  D KLFVGNL ++VDS +LA LFE AG VE+ 
Sbjct: 123 -------------GDDSAPVERNSFSP--DLKLFVGNLSFNVDSAQLAQLFESAGNVEMV 182

Query: 182 EVIYNRETDRSRGFGFVTMSTVEEAEKAVDTFNRYELSGRLLTVNKAAPRGSRQE---RE 241
           EVIY++ T RSRGFGFVTMST  E E A   FN YE  GR L VN   P   R+E   R 
Sbjct: 183 EVIYDKVTGRSRGFGFVTMSTAAEVEAAAQQFNGYEFEGRPLRVNAGPPPPKREESFSRG 242

Query: 242 PRT--------------------------------------------------------- 301
           PR+                                                         
Sbjct: 243 PRSGGYGSERGGGYGSERGGGYGSERGGGYGSERGGGYGSQRSGGGYGGSQRSSYGSGSG 302

Query: 302 ----FQSTFRIYVGNLPWDVDNARLEQVFSEHGKVVDARVLYDRDSGRSRGFGFVTMADE 326
                 S  R+YVGNL W VD+  LE +F+E GKVV+ARV+YDRDSGRS+GFGFVT++  
Sbjct: 303 SGSGSGSGNRLYVGNLSWGVDDMALENLFNEQGKVVEARVIYDRDSGRSKGFGFVTLSSS 339

The following BLAST results are available for this feature:

BLAST of PI0011324 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q04836	1.8e-83	57.57	31 kDa ribonucleoprotein, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CP31A...	[more]
P19683	6.8e-83	56.62	31 kDa ribonucleoprotein, chloroplastic OS=Nicotiana sylvestris OX=4096 PE=1 SV=...	[more]
P19682	1.8e-80	55.48	28 kDa ribonucleoprotein, chloroplastic OS=Nicotiana sylvestris OX=4096 PE=1 SV=...	[more]
Q9FGS0	1.1e-77	58.36	RNA-binding protein CP31B, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CP31...	[more]
P28644	1.2e-76	61.92	28 kDa ribonucleoprotein, chloroplastic OS=Spinacia oleracea OX=3562 PE=1 SV=1	[more]

BLAST of PI0011324 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BIH5	2.0e-170	94.55	28 kDa ribonucleoprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol...	[more]
A0A5A7USX4	9.3e-168	93.66	Ribonucleoprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G00...	[more]
A0A0A0LNS8	3.5e-167	93.03	Ribonucleoprotein OS=Cucumis sativus OX=3659 GN=Csa_1G002890 PE=4 SV=1	[more]
A0A6J1C316	2.5e-149	85.46	28 kDa ribonucleoprotein, chloroplastic-like OS=Momordica charantia OX=3673 GN=L...	[more]
A0A6J1JFY1	7.2e-136	79.88	28 kDa ribonucleoprotein, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC1...	[more]

BLAST of PI0011324 vs. NCBI nr


Match Name	E-value	Identity	Description
TYJ98491.1	4.1e-170	94.55	28 kDa ribonucleoprotein [Cucumis melo var. makuwa]	[more]
KAA0057807.1	1.9e-167	93.66	Ribonucleoprotein [Cucumis melo var. makuwa]	[more]
XP_004138078.1	7.3e-167	93.03	28 kDa ribonucleoprotein, chloroplastic [Cucumis sativus] >KAE8652388.1 hypothet...	[more]
XP_038878997.1	5.8e-156	90.30	28 kDa ribonucleoprotein, chloroplastic-like [Benincasa hispida]	[more]
XP_022134798.1	5.2e-149	85.46	28 kDa ribonucleoprotein, chloroplastic-like [Momordica charantia]	[more]

BLAST of PI0011324 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G24770.1	1.3e-84	57.57	31-kDa RNA binding protein	[more]
AT5G50250.1	8.0e-79	58.36	chloroplast RNA-binding protein 31B	[more]
AT2G37220.1	9.2e-51	52.27	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT3G53460.1	6.6e-41	35.81	chloroplast RNA-binding protein 29	[more]
AT3G53460.2	6.6e-41	35.81	chloroplast RNA-binding protein 29	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 244..317 e-value: 1.8E-28 score: 110.5 coord: 150..223 e-value: 3.3E-26 score: 103.1
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 151..220 e-value: 1.2E-20 score: 73.1 coord: 245..315 e-value: 1.4E-20 score: 72.9
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 243..321 score: 20.149988
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 149..227 score: 18.785557
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 235..326 e-value: 1.4E-28 score: 101.5
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 85..234 e-value: 4.3E-29 score: 103.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 105..120
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 122..143
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 54..79
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 54..147
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 80..95
None	No IPR available	PANTHER	PTHR48025:SF8	RIBONUCLEOPROTEIN	coord: 1..326
None	No IPR available	PANTHER	PTHR48025	OS02G0815200 PROTEIN	coord: 1..326
None	No IPR available	CDD	cd12399	RRM_HP0827_like	coord: 244..320 e-value: 1.35827E-33 score: 116.944
None	No IPR available	CDD	cd12399	RRM_HP0827_like	coord: 150..227 e-value: 4.42296E-35 score: 120.796
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 239..325
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 144..236

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0011324.1	PI0011324.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:1901259	chloroplast rRNA processing
molecular_function	GO:0003729	mRNA binding
molecular_function	GO:0003676	nucleic acid binding