PI0010864 (gene) Melon (PI 482460) v1

Overview
NamePI0010864
Typegene
OrganismCucumis metuliferus (Melon (PI 482460) v1)
DescriptionKirola-like
Locationchr03: 22291079 .. 22291600 (+)
RNA-Seq ExpressionPI0010864
SyntenyPI0010864
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCTCGTATTGGATCTGCCATGGACGAATGGTTCCGTCGTCTTCAGACTACACCGACCTTTCCAAAATCCAACAGTTTTTCAACCGTACGCGTCGTCGCCGGAGGTCCATGCACCATTGTCGAAGCAACACACGCCTGCCTATTCCGGTCAGAAGCTGTCGACCGACCCTCTTCTACCACCCTTACCTTCATCCGCAACTGTCAGTGTCTCTCACACGCCGTTTTATATTCTGCCCTCTTCCTTCATCCAGCTACCGTTGTTTCAGCCATCCAATTTGTATGCCCTTCCTTCCACTACCACTGTTCCAAACCCTAACAATCATCCAGGGGTTGAGCATCTTCAAATCCACTCAACATTTGTAGTCGGAGAGTCTTCGGCACATTCCAACCCTAACATGCTGACCTCCCCTTCGGGAGTAGCTCACCAGCAATTGGAGGGGTTTCGACAGCAGATTGCAGCAATTGAGGCTTCTTTAGGGGCAACACCCAACACTTCTTATGTGACTAATACAGTGACATAG

mRNA sequence

ATGCTCGTATTGGATCTGCCATGGACGAATGGTTCCGTCGTCTTCAGACTACACCGACCTTTCCAAAATCCAACAGTTTTTCAACCGTACGCGTCGTCGCCGGAGGTCCATGCACCATTGTCGAAGCAACACACGCCTGCCTATTCCGGTCAGAAGCTGTCGACCGACCCTCTTCTACCACCCTTACCTTCATCCGCAACTGTCAGTGTCTCTCACACGCCGTTTTATATTCTGCCCTCTTCCTTCATCCAGCTACCGTTGTTTCAGCCATCCAATTTGTATGCCCTTCCTTCCACTACCACTGTTCCAAACCCTAACAATCATCCAGGGGTTGAGCATCTTCAAATCCACTCAACATTTGTAGTCGGAGAGTCTTCGGCACATTCCAACCCTAACATGCTGACCTCCCCTTCGGGAGTAGCTCACCAGCAATTGGAGGGGTTTCGACAGCAGATTGCAGCAATTGAGGCTTCTTTAGGGGCAACACCCAACACTTCTTATGTGACTAATACAGTGACATAG

Coding sequence (CDS)

ATGCTCGTATTGGATCTGCCATGGACGAATGGTTCCGTCGTCTTCAGACTACACCGACCTTTCCAAAATCCAACAGTTTTTCAACCGTACGCGTCGTCGCCGGAGGTCCATGCACCATTGTCGAAGCAACACACGCCTGCCTATTCCGGTCAGAAGCTGTCGACCGACCCTCTTCTACCACCCTTACCTTCATCCGCAACTGTCAGTGTCTCTCACACGCCGTTTTATATTCTGCCCTCTTCCTTCATCCAGCTACCGTTGTTTCAGCCATCCAATTTGTATGCCCTTCCTTCCACTACCACTGTTCCAAACCCTAACAATCATCCAGGGGTTGAGCATCTTCAAATCCACTCAACATTTGTAGTCGGAGAGTCTTCGGCACATTCCAACCCTAACATGCTGACCTCCCCTTCGGGAGTAGCTCACCAGCAATTGGAGGGGTTTCGACAGCAGATTGCAGCAATTGAGGCTTCTTTAGGGGCAACACCCAACACTTCTTATGTGACTAATACAGTGACATAG

Protein sequence

MLVLDLPWTNGSVVFRLHRPFQNPTVFQPYASSPEVHAPLSKQHTPAYSGQKLSTDPLLPPLPSSATVSVSHTPFYILPSSFIQLPLFQPSNLYALPSTTTVPNPNNHPGVEHLQIHSTFVVGESSAHSNPNMLTSPSGVAHQQLEGFRQQIAAIEASLGATPNTSYVTNTVT
Homology
BLAST of PI0010864 vs. ExPASy TrEMBL
Match: A0A5A7U0S5 (Kirola-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold291G00200 PE=4 SV=1)

HSP 1 Score: 110.2 bits (274), Expect = 9.0e-21
Identity = 74/167 (44.31%), Postives = 92/167 (55.09%), Query Frame = 0

Query: 24  PTVFQPYASSPEVHAPLSKQHTPAYSGQKLSTDPLLPPLPSSATVSVSHTPFYILPSSFI 83
           P+  Q  A     HAP S+ H      Q  ST+P + P  SSAT    H P  +LP    
Sbjct: 7   PSNMQSSAPPTTPHAPPSEIHASVLPPQTASTNPSVQPFSSSATNIAPHAPICVLPPKSG 66

Query: 84  QLPLFQPSNLYALPSTTTVPNPNNHPGVEHLQIHSTFVVGESSAHSNPNMLTSPSGVAHQ 143
           + P   PSNLYALP      + ++HP V++ +IHSTF +GES AHSNPN+  S SG+A Q
Sbjct: 67  RQPPLLPSNLYALPPI----DLSHHPNVKNTKIHSTFEIGESLAHSNPNVQVS-SGIAQQ 126

Query: 144 QLEGFRQQIAAIEASLGATPNTS------------------YVTNTV 173
           QLEG R+QIAA+EA+L  T NTS                  YVTNTV
Sbjct: 127 QLEGLRKQIAALEATLRTTSNTSIPMYSENPVISFPTLSSPYVTNTV 168

BLAST of PI0010864 vs. ExPASy TrEMBL
Match: A0A5D3BCQ1 (Kirola-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold986G00260 PE=4 SV=1)

HSP 1 Score: 109.8 bits (273), Expect = 1.2e-20
Identity = 72/162 (44.44%), Postives = 89/162 (54.94%), Query Frame = 0

Query: 10  NGSVVFRLHRP------FQNPTVFQPYASSPEVHAPLSKQHTPAYSGQKLSTDPLLPPLP 69
           +G   FR  RP      F++P +  P    PE HAP SK   PA+S Q   T+P LP L 
Sbjct: 42  SGFAAFRQRRPTRFYHHFRHPYLHTP---PPEHHAPSSKTFVPAHSVQIPPTNPSLPTLS 101

Query: 70  SSATVSVSHTPFYILPSSFIQLPLFQPSNLYALPSTTTVPNPNNHPGVEHLQIHSTFVVG 129
           S    +V H   ++LP +F+Q      SNLYAL  T    NP+ HP V +LQIHSTF VG
Sbjct: 102 SFVVCNVLHVSLHVLPPNFVQQISLLQSNLYALLPTYFAGNPSYHPKVGNLQIHSTFEVG 161

Query: 130 ESSAHSNPNMLTSPSGVAHQQLEGFRQQIAAIEASLGATPNT 166
           ESSAHSNP++  SPSG+A             IEA+ G T NT
Sbjct: 162 ESSAHSNPSVQASPSGIA-----------GTIEATSGTTSNT 189

BLAST of PI0010864 vs. ExPASy TrEMBL
Match: A0A5D3E0J3 (Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1228G00300 PE=4 SV=1)

HSP 1 Score: 107.5 bits (267), Expect = 5.8e-20
Identity = 60/110 (54.55%), Postives = 74/110 (67.27%), Query Frame = 0

Query: 57  PLLPPLPSSATVSVSHTPFYILPSSFIQLPLFQPSNLYALPSTTTVPNPNNHPGVEHLQI 116
           P + PL SS T  V H P ++LP +  Q P    S LY LP T +  NP+ HP V + QI
Sbjct: 38  PFVSPLSSSTTCIVPHAPLHLLPPNSGQTPPLLQSYLYVLPPTDSTANPSYHPEVRNPQI 97

Query: 117 HSTFVVGESSAHSNPNMLTSP-SGVAHQQLEGFRQQIAAIEASLGATPNT 166
           HSTF VGESS +SNPNM ++P SG+AH QLE  RQQIAA+EA+LG T +T
Sbjct: 98  HSTFKVGESSTYSNPNMPSTPFSGIAHLQLEELRQQIAALEATLGTTSHT 147

BLAST of PI0010864 vs. ExPASy TrEMBL
Match: A0A5A7SV66 (Kirola-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold57G002640 PE=4 SV=1)

HSP 1 Score: 107.5 bits (267), Expect = 5.8e-20
Identity = 60/112 (53.57%), Postives = 75/112 (66.96%), Query Frame = 0

Query: 55  TDPLLPPLPSSATVSVSHTPFYILPSSFIQLPLFQPSNLYALPSTTTVPNPNNHPGVEHL 114
           +DP + PL SS T  V H P ++LP +  Q P    S LY LP T +  NP+ HP V + 
Sbjct: 36  SDPFVSPLSSSTTCIVPHAPLHLLPPNSGQTPPLLQSYLYVLPPTDSTANPSYHPEVRNP 95

Query: 115 QIHSTFVVGESSAHSNPNMLTSP-SGVAHQQLEGFRQQIAAIEASLGATPNT 166
           QIHSTF VGESS +SNPNM ++P SG+AH QLE  R QIAA+EA+LG T +T
Sbjct: 96  QIHSTFKVGESSTYSNPNMPSTPFSGIAHLQLEELRLQIAALEATLGTTSHT 147

BLAST of PI0010864 vs. ExPASy TrEMBL
Match: A0A5A7U0M6 (Chloride channel protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold133G00240 PE=3 SV=1)

HSP 1 Score: 99.0 bits (245), Expect = 2.1e-17
Identity = 62/129 (48.06%), Postives = 76/129 (58.91%), Query Frame = 0

Query: 37  HAPLSKQHTPAYSGQKLSTDPLLPPLPSSATVSVSHTPFYILPSSFIQLPLFQPSNLYAL 96
           H P S+ H   +    +   P + P  SSA    SH P ++L  +  Q PL  PSNLYAL
Sbjct: 765 HTPPSELHMLVHPPLIVLVIPFVQPSSSSAAYIASHAPIHVLSPNSGQPPLLLPSNLYAL 824

Query: 97  PSTTTVPNPNNHPGVEHLQIHSTFVVGESSAHSNPNMLTSPSGVAHQQLEGFRQQIAAIE 156
           P T      + H  V++ QIHSTF VGESS +SN NM  S  G+A QQLEG +QQIA IE
Sbjct: 825 PPTYL----SYHLDVKNSQIHSTFEVGESSTNSNLNMQASSLGIAQQQLEGLQQQIAEIE 884

Query: 157 ASLGATPNT 166
           A+LG T NT
Sbjct: 885 ATLGTTSNT 889

BLAST of PI0010864 vs. NCBI nr
Match: KAA0048808.1 (kirola-like [Cucumis melo var. makuwa] >TYK20760.1 kirola-like [Cucumis melo var. makuwa])

HSP 1 Score: 110.2 bits (274), Expect = 1.9e-20
Identity = 74/167 (44.31%), Postives = 92/167 (55.09%), Query Frame = 0

Query: 24  PTVFQPYASSPEVHAPLSKQHTPAYSGQKLSTDPLLPPLPSSATVSVSHTPFYILPSSFI 83
           P+  Q  A     HAP S+ H      Q  ST+P + P  SSAT    H P  +LP    
Sbjct: 7   PSNMQSSAPPTTPHAPPSEIHASVLPPQTASTNPSVQPFSSSATNIAPHAPICVLPPKSG 66

Query: 84  QLPLFQPSNLYALPSTTTVPNPNNHPGVEHLQIHSTFVVGESSAHSNPNMLTSPSGVAHQ 143
           + P   PSNLYALP      + ++HP V++ +IHSTF +GES AHSNPN+  S SG+A Q
Sbjct: 67  RQPPLLPSNLYALPPI----DLSHHPNVKNTKIHSTFEIGESLAHSNPNVQVS-SGIAQQ 126

Query: 144 QLEGFRQQIAAIEASLGATPNTS------------------YVTNTV 173
           QLEG R+QIAA+EA+L  T NTS                  YVTNTV
Sbjct: 127 QLEGLRKQIAALEATLRTTSNTSIPMYSENPVISFPTLSSPYVTNTV 168

BLAST of PI0010864 vs. NCBI nr
Match: TYJ96736.1 (kirola-like [Cucumis melo var. makuwa])

HSP 1 Score: 109.8 bits (273), Expect = 2.4e-20
Identity = 72/162 (44.44%), Postives = 89/162 (54.94%), Query Frame = 0

Query: 10  NGSVVFRLHRP------FQNPTVFQPYASSPEVHAPLSKQHTPAYSGQKLSTDPLLPPLP 69
           +G   FR  RP      F++P +  P    PE HAP SK   PA+S Q   T+P LP L 
Sbjct: 42  SGFAAFRQRRPTRFYHHFRHPYLHTP---PPEHHAPSSKTFVPAHSVQIPPTNPSLPTLS 101

Query: 70  SSATVSVSHTPFYILPSSFIQLPLFQPSNLYALPSTTTVPNPNNHPGVEHLQIHSTFVVG 129
           S    +V H   ++LP +F+Q      SNLYAL  T    NP+ HP V +LQIHSTF VG
Sbjct: 102 SFVVCNVLHVSLHVLPPNFVQQISLLQSNLYALLPTYFAGNPSYHPKVGNLQIHSTFEVG 161

Query: 130 ESSAHSNPNMLTSPSGVAHQQLEGFRQQIAAIEASLGATPNT 166
           ESSAHSNP++  SPSG+A             IEA+ G T NT
Sbjct: 162 ESSAHSNPSVQASPSGIA-----------GTIEATSGTTSNT 189

BLAST of PI0010864 vs. NCBI nr
Match: TYK29238.1 (Beta-galactosidase [Cucumis melo var. makuwa])

HSP 1 Score: 107.5 bits (267), Expect = 1.2e-19
Identity = 60/110 (54.55%), Postives = 74/110 (67.27%), Query Frame = 0

Query: 57  PLLPPLPSSATVSVSHTPFYILPSSFIQLPLFQPSNLYALPSTTTVPNPNNHPGVEHLQI 116
           P + PL SS T  V H P ++LP +  Q P    S LY LP T +  NP+ HP V + QI
Sbjct: 38  PFVSPLSSSTTCIVPHAPLHLLPPNSGQTPPLLQSYLYVLPPTDSTANPSYHPEVRNPQI 97

Query: 117 HSTFVVGESSAHSNPNMLTSP-SGVAHQQLEGFRQQIAAIEASLGATPNT 166
           HSTF VGESS +SNPNM ++P SG+AH QLE  RQQIAA+EA+LG T +T
Sbjct: 98  HSTFKVGESSTYSNPNMPSTPFSGIAHLQLEELRQQIAALEATLGTTSHT 147

BLAST of PI0010864 vs. NCBI nr
Match: KAA0035164.1 (kirola-like [Cucumis melo var. makuwa])

HSP 1 Score: 107.5 bits (267), Expect = 1.2e-19
Identity = 60/112 (53.57%), Postives = 75/112 (66.96%), Query Frame = 0

Query: 55  TDPLLPPLPSSATVSVSHTPFYILPSSFIQLPLFQPSNLYALPSTTTVPNPNNHPGVEHL 114
           +DP + PL SS T  V H P ++LP +  Q P    S LY LP T +  NP+ HP V + 
Sbjct: 36  SDPFVSPLSSSTTCIVPHAPLHLLPPNSGQTPPLLQSYLYVLPPTDSTANPSYHPEVRNP 95

Query: 115 QIHSTFVVGESSAHSNPNMLTSP-SGVAHQQLEGFRQQIAAIEASLGATPNT 166
           QIHSTF VGESS +SNPNM ++P SG+AH QLE  R QIAA+EA+LG T +T
Sbjct: 96  QIHSTFKVGESSTYSNPNMPSTPFSGIAHLQLEELRLQIAALEATLGTTSHT 147

BLAST of PI0010864 vs. NCBI nr
Match: KAA0047786.1 (chloride channel protein CLC-e [Cucumis melo var. makuwa])

HSP 1 Score: 99.0 bits (245), Expect = 4.3e-17
Identity = 62/129 (48.06%), Postives = 76/129 (58.91%), Query Frame = 0

Query: 37  HAPLSKQHTPAYSGQKLSTDPLLPPLPSSATVSVSHTPFYILPSSFIQLPLFQPSNLYAL 96
           H P S+ H   +    +   P + P  SSA    SH P ++L  +  Q PL  PSNLYAL
Sbjct: 765 HTPPSELHMLVHPPLIVLVIPFVQPSSSSAAYIASHAPIHVLSPNSGQPPLLLPSNLYAL 824

Query: 97  PSTTTVPNPNNHPGVEHLQIHSTFVVGESSAHSNPNMLTSPSGVAHQQLEGFRQQIAAIE 156
           P T      + H  V++ QIHSTF VGESS +SN NM  S  G+A QQLEG +QQIA IE
Sbjct: 825 PPTYL----SYHLDVKNSQIHSTFEVGESSTNSNLNMQASSLGIAQQQLEGLQQQIAEIE 884

Query: 157 ASLGATPNT 166
           A+LG T NT
Sbjct: 885 ATLGTTSNT 889

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5A7U0S59.0e-2144.31Kirola-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold291G00200 PE... [more]
A0A5D3BCQ11.2e-2044.44Kirola-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold986G00260 PE... [more]
A0A5D3E0J35.8e-2054.55Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1228G... [more]
A0A5A7SV665.8e-2053.57Kirola-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold57G002640 PE... [more]
A0A5A7U0M62.1e-1748.06Chloride channel protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffol... [more]
Match NameE-valueIdentityDescription
KAA0048808.11.9e-2044.31kirola-like [Cucumis melo var. makuwa] >TYK20760.1 kirola-like [Cucumis melo var... [more]
TYJ96736.12.4e-2044.44kirola-like [Cucumis melo var. makuwa][more]
TYK29238.11.2e-1954.55Beta-galactosidase [Cucumis melo var. makuwa][more]
KAA0035164.11.2e-1953.57kirola-like [Cucumis melo var. makuwa][more]
KAA0047786.14.3e-1748.06chloride channel protein CLC-e [Cucumis melo var. makuwa][more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
PI0010864.1PI0010864.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009987 cellular process
biological_process GO:0008152 metabolic process
biological_process GO:0006810 transport