PI0010707 (gene) Melon (PI 482460) v1

Overview
NamePI0010707
Typegene
OrganismCucumis metuliferus (Melon (PI 482460) v1)
DescriptionUnknown protein
Locationchr07: 24288861 .. 24289659 (-)
RNA-Seq ExpressionPI0010707
SyntenyPI0010707
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTTGACCAAAACAAGTTGAATTTCATTCAAAGAATCAGGCAGCAAGCAAGCAGTAAAAACCAACAACATTTTGTTATTGTTCAAGTGGGCCTTACACTTTTGTTTACTGCACAGCTCTCGGTGGATACTGGATGGGATTCCCACACTGTTTTCAATGATTGCGAGCCGTTGTGGTTAAAAAGTGGATATCTGCCGTAATGAAAATGTCTCCAAGCCAATAATTAAAATAATAATAAAAAAAAATCAACAGTTATTATTTTTTAATTTTTTTTTTTTTTTAACTTTACCTGAGAATCCCCAATTATGGTCCGGCGGTGGACGTCAGAGAGAGGAGTTCATCGTTGGCTGCTGCATTTGGAGCCTCAACAAATCTACTTTATAATCCTGCACGAAGAGAATCTGAAAAGGCAGTTAGAGAACAAAAGAATGAATGCTTGGTATAAAAAAGTTAAGACTCATTTTGCTGCAATCAGCCATGTTGCTGGTAGCTAATATTCTGTCACATGAATGCCAGATTTACTGCGGCTTCAGACAGTAGTTTGAATGTGTTTCTGAATAAAAAAATCATAATTTCCAATACAACAGATATATAGAAAGTGCTAGTGCTGATGCTAGTAGATGAATCATGAATATTTACTAGTCAAATCTATAAAAGCAAACTAGCTACTGTGATTAATTAGTATCCCTTGAGAATAAATTAATCAGCCTATCGAATAATCAAGTGGCACGTAAAACAAAGTTGTCCAAGTTTGAGGACTGGGACAAGGTAGTGTCCACACAGGACAAGGTTACATAA

mRNA sequence

ATGGTTGACCAAAACAAGTTGAATTTCATTCAAAGAATCAGGCAGCAAGCAAGCAGTAAAAACCAACAACATTTTGTTATTGTTCAAGTGGGCCTTACACTTTTGTTTACTGCACAGCTCTCGGTGGATACTGGATGGGATTCCCACACTGTTTTCAATGATTGCGAGCCGTTGTGGTTAAAAAGTGGATATCTGCCAATCCCCAATTATGGTCCGGCGGTGGACGTCAGAGAGAGGAGTTCATCGTTGGCTGCTGCATTTGGAGCCTCAACAAATCTACTTTATAATCCTGCACGAAGAGAATCTGAAAAGGCAGTTAGAGAACAAAAGAATGAATGCTTGAATAAATTAATCAGCCTATCGAATAATCAAGTGGCACGTAAAACAAAGTTGTCCAAGTTTGAGGACTGGGACAAGGTAGTGTCCACACAGGACAAGGTTACATAA

Coding sequence (CDS)

ATGGTTGACCAAAACAAGTTGAATTTCATTCAAAGAATCAGGCAGCAAGCAAGCAGTAAAAACCAACAACATTTTGTTATTGTTCAAGTGGGCCTTACACTTTTGTTTACTGCACAGCTCTCGGTGGATACTGGATGGGATTCCCACACTGTTTTCAATGATTGCGAGCCGTTGTGGTTAAAAAGTGGATATCTGCCAATCCCCAATTATGGTCCGGCGGTGGACGTCAGAGAGAGGAGTTCATCGTTGGCTGCTGCATTTGGAGCCTCAACAAATCTACTTTATAATCCTGCACGAAGAGAATCTGAAAAGGCAGTTAGAGAACAAAAGAATGAATGCTTGAATAAATTAATCAGCCTATCGAATAATCAAGTGGCACGTAAAACAAAGTTGTCCAAGTTTGAGGACTGGGACAAGGTAGTGTCCACACAGGACAAGGTTACATAA

Protein sequence

MVDQNKLNFIQRIRQQASSKNQQHFVIVQVGLTLLFTAQLSVDTGWDSHTVFNDCEPLWLKSGYLPIPNYGPAVDVRERSSSLAAAFGASTNLLYNPARRESEKAVREQKNECLNKLISLSNNQVARKTKLSKFEDWDKVVSTQDKVT
Homology
[Close]
BLAST of PI0010707 vs. ExPASy TrEMBL
Match: A0A0A0L4F8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G652890 PE=4 SV=1)

HSP 1 Score: 235.7 bits (600), Expect = 1.2e-58
Identity = 124/150 (82.67%), Postives = 128/150 (85.33%), Query Frame = 0 

Query: 1   MVDQ-NKLNFIQRIRQQASSKNQQHFVIVQVGLTLLFTAQLSVDTGWDSHTVFNDCEPLW 60
           MVDQ  KLNFIQRIRQQASSKNQQHFVIVQVGLTLLFTAQLSVDTGWDSHTVFNDCEPLW
Sbjct: 1   MVDQTTKLNFIQRIRQQASSKNQQHFVIVQVGLTLLFTAQLSVDTGWDSHTVFNDCEPLW 60

Query: 61  LKSGYLPIPNYGPAVDVRERSSSLAAA-FGASTNLLYNPARRESEKAVREQKNECLNKLI 120
           LKSGYLPIPNY PAVDVRE+        +    NLLYNPARRESEKAVREQKNECL    
Sbjct: 61  LKSGYLPIPNYAPAVDVREKEFIAGCCIWSLKKNLLYNPARRESEKAVREQKNECL---- 120

Query: 121 SLSNNQVARKTKLSKFEDWDKVVSTQDKVT 149
            +SNNQV  KTKLS+FEDWDKVVSTQDKVT
Sbjct: 121 PISNNQVTGKTKLSEFEDWDKVVSTQDKVT 146

[Close]
BLAST of PI0010707 vs. NCBI nr
Match: KGN55477.1 (hypothetical protein Csa_012711 [Cucumis sativus])

HSP 1 Score: 235.7 bits (600), Expect = 2.5e-58
Identity = 124/150 (82.67%), Postives = 128/150 (85.33%), Query Frame = 0 

Query: 1   MVDQ-NKLNFIQRIRQQASSKNQQHFVIVQVGLTLLFTAQLSVDTGWDSHTVFNDCEPLW 60
           MVDQ  KLNFIQRIRQQASSKNQQHFVIVQVGLTLLFTAQLSVDTGWDSHTVFNDCEPLW
Sbjct: 1   MVDQTTKLNFIQRIRQQASSKNQQHFVIVQVGLTLLFTAQLSVDTGWDSHTVFNDCEPLW 60

Query: 61  LKSGYLPIPNYGPAVDVRERSSSLAAA-FGASTNLLYNPARRESEKAVREQKNECLNKLI 120
           LKSGYLPIPNY PAVDVRE+        +    NLLYNPARRESEKAVREQKNECL    
Sbjct: 61  LKSGYLPIPNYAPAVDVREKEFIAGCCIWSLKKNLLYNPARRESEKAVREQKNECL---- 120

Query: 121 SLSNNQVARKTKLSKFEDWDKVVSTQDKVT 149
            +SNNQV  KTKLS+FEDWDKVVSTQDKVT
Sbjct: 121 PISNNQVTGKTKLSEFEDWDKVVSTQDKVT 146

The following BLAST results are available for this feature:
BLAST of PI0010707 vs.
Match NameE-valueIdentityDescription
BLAST of PI0010707 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L4F81.2e-5882.67Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G652890 PE=4 SV=1[more]
BLAST of PI0010707 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN55477.12.5e-5882.67hypothetical protein Csa_012711 [Cucumis sativus][more]
BLAST of PI0010707 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
PI0010707.1PI0010707.1mRNA