PI0010506 (gene) Melon (PI 482460) v1

Overview


Name	PI0010506
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	COX assembly mitochondrial protein
Location	chr12: 10144240 .. 10145668 (+)
RNA-Seq Expression	PI0010506
Synteny	PI0010506

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TGAAAGAATAATTGAACAAAAAAAAAACCTTCTCTTCCGCCCCAAATGGTGTGGGACACCGTTGCGACAACGGAAAGAAAGATATGTTACCAATCGGTGAATCTCCGACATGTGGTGACGGTGGCTGCGAGCGCCTGGAACAAGCTCTCCGAGAGTGTCACAAGCGAGTCCCAGAAGGTCCGGCGCGGCGGTCAGCCTGCCGACACCTGAACCGATCTTTTGCAGAGTGTCTGGTGGCGACGGCATGTCCTAGCGAGGCGGAGGCGGTACGAACCCTCTGCTCCAGCGGCGGAACCGCTCTCAAGAGATCGCAGTGCGAGCAAGCTAAGTTTTCGCTCTCTTTCTGCCTCTCCTCTCTACAATTTTGAAACCCTAGATCCTTGAAATCGGTGTAGAAAAAGGGGAAATCTGTAGTTTGGGGATCGCATCGGTGAAGATGGATTAATGAGTATGTGAAGATAATGAAGCACTCATGTTTTTAAAAATTCCTTAGAACAAACAAATCTTCAAACATCGTTCAAAGTGAGAAAGAATGTGAATCCATATCCCTTCTCGAGGAAAAAACATCAAAATTGTTGAATATACTGAGTGAAATTCCTTCCGAGTCGCATAATTTTGTCATTAGCAACTATATGTTTTAGTTTTGTTACTGAACATGTCATTGATATCAATTGGAAGTCTCAATGTCAAATACTGAATTTTTGTTCAAACAAAGTACTCCCATCTCCTTATTCATCAATCCCACACCTGATGGCTTTTGCTTGTTTGATTGGAAATTGATCAGAATCAATCCATGGTTGAGATATAATCTTAAAGTTGAAGCTGCCATTCCTGATGGCTGTTGCTATTGCAAATGCTCTTGCTTTTTCTTTCCATGTTCTGCCAAAAATTCGGATTTAAATGGAGCTCACTCACCAGGACCCATTTGTTCATAACCTGACAAACCCTTCTGTGAAACTTGAGTTTGATTATAAATGGAGTGATAGTGAATAGTGTTTCGTAATTGATTCCAAGCTCCTCGAGACACCTGCACCCATCTCAAAGTTTGGCCTCAACATCAAGAATTTTTTATATTAAGCTCTCCTAAATATTGGAACTTGAGACTTTAATTAAGTCAGACACTCCAAGTTCTTGCCTAGGAAATATTTTCGTCGTTGTTTCAAGTTTACATGATTTTTTATGCAAATTTGGGAACTGGGACAGTATTGTTCATGCTAATTGGAAAATTCATATCTGGACTTTACTCTATCATTCATTACAAAGCAATCAACCTCAAGGGTGGAAACCAGCAAATACAAAGAATGAGATATTATAGTAGCTTGATTAGAATAATTTGTGTTTGAGGTATAGTCAAATAGTAAAAACTGTAGCAAATAGGAAATATTGTAGCTAATAGGGGATTTTGGCTATTATTATAGTCTTGCATAAT

mRNA sequence

TGAAAGAATAATTGAACAAAAAAAAAACCTTCTCTTCCGCCCCAAATGGTGTGGGACACCGTTGCGACAACGGAAAGAAAGATATGTTACCAATCGGTGAATCTCCGACATGTGGTGACGGTGGCTGCGAGCGCCTGGAACAAGCTCTCCGAGAGTGTCACAAGCGAGTCCCAGAAGGTCCGGCGCGGCGGTCAGCCTGCCGACACCTGAACCGATCTTTTGCAGAGTGTCTGGTGGCGACGGCATGTCCTAGCGAGGCGGAGGCGGTACGAACCCTCTGCTCCAGCGGCGGAACCGCTCTCAAGAGATCGCAGTGCGAGCAAGCTAAGTTTTCGCTCTCTTTCTGCCTCTCCTCTCTACAATTTTGAAACCCTAGATCCTTGAAATCGGTGTAGAAAAAGGGGAAATCTGTAGTTTGGGGATCGCATCGGTGAAGATGGATTAATGAGTATGTGAAGATAATGAAGCACTCATGTTTTTAAAAATTCCTTAGAACAAACAAATCTTCAAACATCGTTCAAAGTGAGAAAGAATGTGAATCCATATCCCTTCTCGAGGAAAAAACATCAAAATTGTTGAATATACTGAGTGAAATTCCTTCCGAGTCGCATAATTTTGTCATTAGCAACTATATGTTTTAGTTTTGTTACTGAACATGTCATTGATATCAATTGGAAGTCTCAATGTCAAATACTGAATTTTTGTTCAAACAAAGTACTCCCATCTCCTTATTCATCAATCCCACACCTGATGGCTTTTGCTTGTTTGATTGGAAATTGATCAGAATCAATCCATGGTTGAGATATAATCTTAAAGTTGAAGCTGCCATTCCTGATGGCTGTTGCTATTGCAAATGCTCTTGCTTTTTCTTTCCATGTTCTGCCAAAAATTCGGATTTAAATGGAGCTCACTCACCAGGACCCATTTGTTCATAACCTGACAAACCCTTCTGTGAAACTTGAGTTTGATTATAAATGGAGTGATAGTGAATAGTGTTTCGTAATTGATTCCAAGCTCCTCGAGACACCTGCACCCATCTCAAAGTTTGGCCTCAACATCAAGAATTTTTTATATTAAGCTCTCCTAAATATTGGAACTTGAGACTTTAATTAAGTCAGACACTCCAAGTTCTTGCCTAGGAAATATTTTCGTCGTTGTTTCAAGTTTACATGATTTTTTATGCAAATTTGGGAACTGGGACAGTATTGTTCATGCTAATTGGAAAATTCATATCTGGACTTTACTCTATCATTCATTACAAAGCAATCAACCTCAAGGGTGGAAACCAGCAAATACAAAGAATGAGATATTATAGTAGCTTGATTAGAATAATTTGTGTTTGAGGTATAGTCAAATAGTAAAAACTGTAGCAAATAGGAAATATTGTAGCTAATAGGGGATTTTGGCTATTATTATAGTCTTGCATAAT

Coding sequence (CDS)

ATGTTACCAATCGGTGAATCTCCGACATGTGGTGACGGTGGCTGCGAGCGCCTGGAACAAGCTCTCCGAGAGTGTCACAAGCGAGTCCCAGAAGGTCCGGCGCGGCGGTCAGCCTGCCGACACCTGAACCGATCTTTTGCAGAGTGTCTGGTGGCGACGGCATGTCCTAGCGAGGCGGAGGCGGTACGAACCCTCTGCTCCAGCGGCGGAACCGCTCTCAAGAGATCGCAGTGCGAGCAAGCTAAGTTTTCGCTCTCTTTCTGCCTCTCCTCTCTACAATTTTGA

Protein sequence

MLPIGESPTCGDGGCERLEQALRECHKRVPEGPARRSACRHLNRSFAECLVATACPSEAEAVRTLCSSGGTALKRSQCEQAKFSLSFCLSSLQF

Homology

[Close]

BLAST of PI0010506 vs. ExPASy TrEMBL
Match: A0A5D3CLT3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold302G00190 PE=4 SV=1)

HSP 1 Score: 184.9 bits (468), Expect = 1.6e-43
Identity = 90/94 (95.74%), Postives = 90/94 (95.74%), Query Frame = 0


Query: 1  MLPIGESPTCGDGGCERLEQALRECHKRVPEGPARRSACRHLNRSFAECLVATACPSEAE 60
          MLPIGESP CGD GCERLEQALRECHKRVPEGPARRSACRHLNRS AECLVATACPSE E
Sbjct: 1  MLPIGESPMCGDDGCERLEQALRECHKRVPEGPARRSACRHLNRSLAECLVATACPSEVE 60

Query: 61 AVRTLCSSGGTALKRSQCEQAKFSLSFCLSSLQF 95
          AVRTLCSSGGTALKRSQCEQAKFSLSFCLSSLQF
Sbjct: 61 AVRTLCSSGGTALKRSQCEQAKFSLSFCLSSLQF 94

[Close]

BLAST of PI0010506 vs. ExPASy TrEMBL
Match: A0A1S3C8S8 (uncharacterized protein LOC103498267 OS=Cucumis melo OX=3656 GN=LOC103498267 PE=4 SV=1)

HSP 1 Score: 184.9 bits (468), Expect = 1.6e-43
Identity = 90/94 (95.74%), Postives = 90/94 (95.74%), Query Frame = 0


Query: 1  MLPIGESPTCGDGGCERLEQALRECHKRVPEGPARRSACRHLNRSFAECLVATACPSEAE 60
          MLPIGESP CGD GCERLEQALRECHKRVPEGPARRSACRHLNRS AECLVATACPSE E
Sbjct: 1  MLPIGESPMCGDDGCERLEQALRECHKRVPEGPARRSACRHLNRSLAECLVATACPSEVE 60

Query: 61 AVRTLCSSGGTALKRSQCEQAKFSLSFCLSSLQF 95
          AVRTLCSSGGTALKRSQCEQAKFSLSFCLSSLQF
Sbjct: 61 AVRTLCSSGGTALKRSQCEQAKFSLSFCLSSLQF 94

[Close]

BLAST of PI0010506 vs. ExPASy TrEMBL
Match: A0A0A0LYC1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G702000 PE=4 SV=1)

HSP 1 Score: 182.2 bits (461), Expect = 1.0e-42
Identity = 89/94 (94.68%), Postives = 91/94 (96.81%), Query Frame = 0


Query: 1  MLPIGESPTCGDGGCERLEQALRECHKRVPEGPARRSACRHLNRSFAECLVATACPSEAE 60
          MLP+GESP  GDGGC+RLEQALRECHKRVPEGPARRSACRHLNRS AECLVATACPSEAE
Sbjct: 1  MLPMGESPLGGDGGCDRLEQALRECHKRVPEGPARRSACRHLNRSLAECLVATACPSEAE 60

Query: 61 AVRTLCSSGGTALKRSQCEQAKFSLSFCLSSLQF 95
          AVRTLCSSGGTALKRSQCEQAKFSLSFCLSSLQF
Sbjct: 61 AVRTLCSSGGTALKRSQCEQAKFSLSFCLSSLQF 94

[Close]

BLAST of PI0010506 vs. ExPASy TrEMBL
Match: A0A6J1K2P5 (uncharacterized protein LOC111490507 OS=Cucurbita maxima OX=3661 GN=LOC111490507 PE=4 SV=1)

HSP 1 Score: 165.2 bits (417), Expect = 1.3e-37
Identity = 79/93 (84.95%), Postives = 85/93 (91.40%), Query Frame = 0


Query: 1  MLPIGESPTCGDGGCERLEQALRECHKRVPEGPARRSACRHLNRSFAECLVATACPSEAE 60
          M+P G++P  GDGGCERLEQALR+CHKR+PEGPARRS C HLNRSFAECLVAT CP+EAE
Sbjct: 1  MVPTGKAPIGGDGGCERLEQALRDCHKRLPEGPARRSGCWHLNRSFAECLVATVCPNEAE 60

Query: 61 AVRTLCSSGGTALKRSQCEQAKFSLSFCLSSLQ 94
          AVRTLCSSGGTALKRSQCEQAKFS S CLSSLQ
Sbjct: 61 AVRTLCSSGGTALKRSQCEQAKFSFSLCLSSLQ 93

[Close]

BLAST of PI0010506 vs. ExPASy TrEMBL
Match: A0A6J1GSM0 (uncharacterized protein LOC111457119 OS=Cucurbita moschata OX=3662 GN=LOC111457119 PE=4 SV=1)

HSP 1 Score: 164.1 bits (414), Expect = 2.9e-37
Identity = 78/93 (83.87%), Postives = 85/93 (91.40%), Query Frame = 0


Query: 1  MLPIGESPTCGDGGCERLEQALRECHKRVPEGPARRSACRHLNRSFAECLVATACPSEAE 60
          M+P G++P  GDGGCERLEQALR+CHKR+PEGPARRS C HLNRSFAECLVAT CP+EAE
Sbjct: 1  MVPTGKAPIGGDGGCERLEQALRDCHKRLPEGPARRSGCWHLNRSFAECLVATVCPNEAE 60

Query: 61 AVRTLCSSGGTALKRSQCEQAKFSLSFCLSSLQ 94
          AVRTLCSSGGTALKRSQCE+AKFS S CLSSLQ
Sbjct: 61 AVRTLCSSGGTALKRSQCEEAKFSFSLCLSSLQ 93

[Close]

BLAST of PI0010506 vs. NCBI nr
Match: XP_008459043.1 (PREDICTED: uncharacterized protein LOC103498267 [Cucumis melo] >KAA0043206.1 uncharacterized protein E6C27_scaffold110G00780 [Cucumis melo var. makuwa] >TYK12262.1 uncharacterized protein E5676_scaffold302G00190 [Cucumis melo var. makuwa])

HSP 1 Score: 184.9 bits (468), Expect = 3.2e-43
Identity = 90/94 (95.74%), Postives = 90/94 (95.74%), Query Frame = 0


Query: 1  MLPIGESPTCGDGGCERLEQALRECHKRVPEGPARRSACRHLNRSFAECLVATACPSEAE 60
          MLPIGESP CGD GCERLEQALRECHKRVPEGPARRSACRHLNRS AECLVATACPSE E
Sbjct: 1  MLPIGESPMCGDDGCERLEQALRECHKRVPEGPARRSACRHLNRSLAECLVATACPSEVE 60

Query: 61 AVRTLCSSGGTALKRSQCEQAKFSLSFCLSSLQF 95
          AVRTLCSSGGTALKRSQCEQAKFSLSFCLSSLQF
Sbjct: 61 AVRTLCSSGGTALKRSQCEQAKFSLSFCLSSLQF 94

[Close]

BLAST of PI0010506 vs. NCBI nr
Match: XP_004145445.1 (uncharacterized protein LOC101219184 [Cucumis sativus])

HSP 1 Score: 182.2 bits (461), Expect = 2.1e-42
Identity = 89/94 (94.68%), Postives = 91/94 (96.81%), Query Frame = 0


Query: 1  MLPIGESPTCGDGGCERLEQALRECHKRVPEGPARRSACRHLNRSFAECLVATACPSEAE 60
          MLP+GESP  GDGGC+RLEQALRECHKRVPEGPARRSACRHLNRS AECLVATACPSEAE
Sbjct: 1  MLPMGESPLGGDGGCDRLEQALRECHKRVPEGPARRSACRHLNRSLAECLVATACPSEAE 60

Query: 61 AVRTLCSSGGTALKRSQCEQAKFSLSFCLSSLQF 95
          AVRTLCSSGGTALKRSQCEQAKFSLSFCLSSLQF
Sbjct: 61 AVRTLCSSGGTALKRSQCEQAKFSLSFCLSSLQF 94

[Close]

BLAST of PI0010506 vs. NCBI nr
Match: XP_038893663.1 (uncharacterized protein LOC120082530 [Benincasa hispida])

HSP 1 Score: 179.1 bits (453), Expect = 1.8e-41
Identity = 87/94 (92.55%), Postives = 89/94 (94.68%), Query Frame = 0


Query: 1  MLPIGESPTCGDGGCERLEQALRECHKRVPEGPARRSACRHLNRSFAECLVATACPSEAE 60
          MLP G +  CGDGGCERLEQALRECHKR+PEGPARRSACRHLNRS AECLVATACPSEAE
Sbjct: 6  MLPTGGASICGDGGCERLEQALRECHKRLPEGPARRSACRHLNRSLAECLVATACPSEAE 65

Query: 61 AVRTLCSSGGTALKRSQCEQAKFSLSFCLSSLQF 95
          AVRTLCSSGGTALKRSQCEQAKFSLSFCLSSLQF
Sbjct: 66 AVRTLCSSGGTALKRSQCEQAKFSLSFCLSSLQF 99

[Close]

BLAST of PI0010506 vs. NCBI nr
Match: XP_023542217.1 (uncharacterized protein LOC111802182 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 165.6 bits (418), Expect = 2.0e-37
Identity = 79/93 (84.95%), Postives = 85/93 (91.40%), Query Frame = 0


Query: 1  MLPIGESPTCGDGGCERLEQALRECHKRVPEGPARRSACRHLNRSFAECLVATACPSEAE 60
          M+P G++P  GDGGCERLEQALR+CHKR+PEGPARRS C HLNRSFAECLVAT CP+EAE
Sbjct: 1  MVPTGKAPIGGDGGCERLEQALRDCHKRLPEGPARRSGCGHLNRSFAECLVATVCPNEAE 60

Query: 61 AVRTLCSSGGTALKRSQCEQAKFSLSFCLSSLQ 94
          AVRTLCSSGGTALKRSQCEQAKFS S CLSSLQ
Sbjct: 61 AVRTLCSSGGTALKRSQCEQAKFSFSLCLSSLQ 93

[Close]

BLAST of PI0010506 vs. NCBI nr
Match: XP_022994930.1 (uncharacterized protein LOC111490507 [Cucurbita maxima])

HSP 1 Score: 165.2 bits (417), Expect = 2.7e-37
Identity = 79/93 (84.95%), Postives = 85/93 (91.40%), Query Frame = 0


Query: 1  MLPIGESPTCGDGGCERLEQALRECHKRVPEGPARRSACRHLNRSFAECLVATACPSEAE 60
          M+P G++P  GDGGCERLEQALR+CHKR+PEGPARRS C HLNRSFAECLVAT CP+EAE
Sbjct: 1  MVPTGKAPIGGDGGCERLEQALRDCHKRLPEGPARRSGCWHLNRSFAECLVATVCPNEAE 60

Query: 61 AVRTLCSSGGTALKRSQCEQAKFSLSFCLSSLQ 94
          AVRTLCSSGGTALKRSQCEQAKFS S CLSSLQ
Sbjct: 61 AVRTLCSSGGTALKRSQCEQAKFSFSLCLSSLQ 93

[Close]

BLAST of PI0010506 vs. TAIR 10
Match: AT1G31175.1 (unknown protein; Has 20 Blast hits to 20 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 20; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 124.0 bits (310), Expect = 6.3e-29
Identity = 57/79 (72.15%), Postives = 69/79 (87.34%), Query Frame = 0


Query: 15  CERLEQALRECHKRVPEGPARRSACRHLNRSFAECLVATACPSEAEAVRTLCSSGGTALK 74
           C+RLE+AL +CH+R+PEGPARRS CRHLN++FAEC+VA ACP E+EAVR+LCSSGGT+LK
Sbjct: 34  CDRLEEALLQCHRRMPEGPARRSGCRHLNKAFAECVVAEACPEESEAVRSLCSSGGTSLK 93

Query: 75  RSQCEQAKFSLSFCLSSLQ 94
           R QCE A+ SLS CLS  Q
Sbjct: 94  RKQCEYAQLSLSLCLSRHQ 112

The following BLAST results are available for this feature:

BLAST of PI0010506 vs.


Match Name	E-value	Identity	Description

BLAST of PI0010506 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CLT3	1.6e-43	95.74	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3C8S8	1.6e-43	95.74	uncharacterized protein LOC103498267 OS=Cucumis melo OX=3656 GN=LOC103498267 PE=...	[more]
A0A0A0LYC1	1.0e-42	94.68	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G702000 PE=4 SV=1	[more]
A0A6J1K2P5	1.3e-37	84.95	uncharacterized protein LOC111490507 OS=Cucurbita maxima OX=3661 GN=LOC111490507...	[more]
A0A6J1GSM0	2.9e-37	83.87	uncharacterized protein LOC111457119 OS=Cucurbita moschata OX=3662 GN=LOC1114571...	[more]

BLAST of PI0010506 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008459043.1	3.2e-43	95.74	PREDICTED: uncharacterized protein LOC103498267 [Cucumis melo] >KAA0043206.1 unc...	[more]
XP_004145445.1	2.1e-42	94.68	uncharacterized protein LOC101219184 [Cucumis sativus]	[more]
XP_038893663.1	1.8e-41	92.55	uncharacterized protein LOC120082530 [Benincasa hispida]	[more]
XP_023542217.1	2.0e-37	84.95	uncharacterized protein LOC111802182 [Cucurbita pepo subsp. pepo]	[more]
XP_022994930.1	2.7e-37	84.95	uncharacterized protein LOC111490507 [Cucurbita maxima]	[more]

BLAST of PI0010506 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G31175.1	6.3e-29	72.15	unknown protein; Has 20 Blast hits to 20 proteins in 10 species: Archae - 0; Bac...	[more]

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0010506.1	PI0010506.1	mRNA