PI0010436 (gene) Melon (PI 482460) v1

Overview


Name	PI0010436
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	succinate dehydrogenase subunit 5, mitochondrial
Location	chr03: 1482971 .. 1484815 (-)
RNA-Seq Expression	PI0010436
Synteny	PI0010436

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGAAAACGGTGATTCTTAGATCACTATTGCGTTCCGTTCGCGCCAGATCTTACGGCATCGCCGGAGTCACTCACCGGAATTTACTCCAAAGTAATCATCAGGTTGCACGAAGCTTCTTCTATCTCTCGTCCCATCGTTCTTCTTTCTCAGATTCTCCACAGAGAGTTTCTTCTGGTACGCTTCGGCTTCCTAATTAGATATTTTCCTTTCATAGATTTAAATCTTTCCTGATTAATTTTGGAAAGAAGCGGAATTCCGCTAAAGTTGTTCGCTATTCTTTGTTCAACTTAGTTAATGCTAGCTATTGAGCTTTTTTCTCAGTTGATTGCTGATATGCTTGTGTATTACTGGTCATTAGTTAAATGTATGGTTCTTCTTCCATGAAGTACACATACAGATGCAGTTCTTTCCAATTTAAAGTATTGCTCGCTGTATTCGTTTAGTAAATTGCTACATTATTTTCTGTATTAGTTTCTATCATCAGGTCAATTGTGCGACGAGTCTTCAGAGTGCGTGCAGTGTGCAATGTGTGGTAAATTTTGCTGTGAAATGCCAAACTTCTCTTTATTGTAACTTTAAGCAATGCCTTTGTCTCAAAGAGTTGTAACAAAATCAATTTCGTATTTGGGGCCAAGGAATATCAACTAAAATTTTAAAATTCATTTACCATTGTATTTTATTGTTTCAGGTCGCCACGGTGATCTGAAGTTTATGAACAATGTAGATACACTCATTTAAATTCTTATTTCTGTATTTTAATGTTTGAAAATATATCATATTCCTTTCTCTGGTAAATTTCTGCAGATTGTAGCTATCCATCTGGTGTAGGGCATGCTAGATTTTTTAGTGCTGATGTAGTTAGTATGCCTACAATTGGAGATCCCGAGCTTAAGAACGTTTTCAAGGATTTGATGGCTGCAAGTTGGGATAAGCTTCCTGAGTCGGTTATCTATGATGTAAAGACCGCATTATCTAGAAGCACTGATGACAAAGCTGGAAAAGAAATTGTGGAAAATGTTTTCCGAGCAGCTGAAGCCGCTGAGGAGTTCGGGGATATACTTATCAACTTGAAAATGGAAATTGATGATAGCATTGGTCTTAGTGGCGAGGTATTGCAATTACAGATTTATCATTTTGTATTATTTTTTGCCAGTTTATAATGTAAAAACTTCTGAGTCAATCTGCAGAATGTGAAGCCTTTGTCCGATGAGCTTAAGAATGCATTGCGTACGGTTCATGATCGCTATACAGCCTACTTGGATTCATTTGGTCCTGAGGAAAACTATCTGCGGAAGAAAGTGGAAACAGAGTTAGGATCAAAGATGATATACTTGAAAATGAGATGCAGTGGCCTTGGATCTGAGTGGGGAAAGGTAAATAGCCTCTTTGCTATGTAGTTTGTAAGTTGCTATTTTCAAACATTTAAGTTGGTGAATTAAATATGGCCCATTAGGCAATTTCTGCAGTACAATTGCCAACTTAGAATCCTTGCACCATTGCATGATAAAAGAGTAGAATCTTTTGATCATCATATGTTAATTTTGGACTGGTAAGGAAGCTTATATGGGAACACTGGGCTAGGAGTTTGGTGACTCATCCTTGTTTACTTTTATAAGCCCTGCAGATTAATACATGTTCAGCTACAATAATTTAATCATATACTTGCATTGGAAAGAGGTCACACTTCTGTCATTCTAATAAATGTTTTTTTTTTTTTTAATTCTAATAGATGAATTTGATTGCTTGGTTTTGTTAACCATGCCATCTTTTTTATTTTACTACAGGTTTCTGTGCTGGGAACCTCTGGTCTATCGGGGTCATATGTTGAGCAAAGAGCATAA

mRNA sequence

ATGGAGAAAACGGTGATTCTTAGATCACTATTGCGTTCCGTTCGCGCCAGATCTTACGGCATCGCCGGAGTCACTCACCGGAATTTACTCCAAAGTAATCATCAGGTTGCACGAAGCTTCTTCTATCTCTCGTCCCATCGTTCTTCTTTCTCAGATTCTCCACAGAGAGTTTCTTCTGATTGTAGCTATCCATCTGGTGTAGGGCATGCTAGATTTTTTAGTGCTGATGTAGTTAGTATGCCTACAATTGGAGATCCCGAGCTTAAGAACGTTTTCAAGGATTTGATGGCTGCAAGTTGGGATAAGCTTCCTGAGTCGGTTATCTATGATGTAAAGACCGCATTATCTAGAAGCACTGATGACAAAGCTGGAAAAGAAATTGTGGAAAATGTTTTCCGAGCAGCTGAAGCCGCTGAGGAGTTCGGGGATATACTTATCAACTTGAAAATGGAAATTGATGATAGCATTGGTCTTAGTGGCGAGAATGTGAAGCCTTTGTCCGATGAGCTTAAGAATGCATTGCGTACGGTTCATGATCGCTATACAGCCTACTTGGATTCATTTGGTCCTGAGGAAAACTATCTGCGGAAGAAAGTGGAAACAGAGTTAGGATCAAAGATGATATACTTGAAAATGAGATGCAGTGGCCTTGGATCTGAGTGGGGAAAGGTTTCTGTGCTGGGAACCTCTGGTCTATCGGGGTCATATGTTGAGCAAAGAGCATAA

Coding sequence (CDS)

ATGGAGAAAACGGTGATTCTTAGATCACTATTGCGTTCCGTTCGCGCCAGATCTTACGGCATCGCCGGAGTCACTCACCGGAATTTACTCCAAAGTAATCATCAGGTTGCACGAAGCTTCTTCTATCTCTCGTCCCATCGTTCTTCTTTCTCAGATTCTCCACAGAGAGTTTCTTCTGATTGTAGCTATCCATCTGGTGTAGGGCATGCTAGATTTTTTAGTGCTGATGTAGTTAGTATGCCTACAATTGGAGATCCCGAGCTTAAGAACGTTTTCAAGGATTTGATGGCTGCAAGTTGGGATAAGCTTCCTGAGTCGGTTATCTATGATGTAAAGACCGCATTATCTAGAAGCACTGATGACAAAGCTGGAAAAGAAATTGTGGAAAATGTTTTCCGAGCAGCTGAAGCCGCTGAGGAGTTCGGGGATATACTTATCAACTTGAAAATGGAAATTGATGATAGCATTGGTCTTAGTGGCGAGAATGTGAAGCCTTTGTCCGATGAGCTTAAGAATGCATTGCGTACGGTTCATGATCGCTATACAGCCTACTTGGATTCATTTGGTCCTGAGGAAAACTATCTGCGGAAGAAAGTGGAAACAGAGTTAGGATCAAAGATGATATACTTGAAAATGAGATGCAGTGGCCTTGGATCTGAGTGGGGAAAGGTTTCTGTGCTGGGAACCTCTGGTCTATCGGGGTCATATGTTGAGCAAAGAGCATAA

Protein sequence

MEKTVILRSLLRSVRARSYGIAGVTHRNLLQSNHQVARSFFYLSSHRSSFSDSPQRVSSDCSYPSGVGHARFFSADVVSMPTIGDPELKNVFKDLMAASWDKLPESVIYDVKTALSRSTDDKAGKEIVENVFRAAEAAEEFGDILINLKMEIDDSIGLSGENVKPLSDELKNALRTVHDRYTAYLDSFGPEENYLRKKVETELGSKMIYLKMRCSGLGSEWGKVSVLGTSGLSGSYVEQRA

Homology

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BLAST of PI0010436 vs. ExPASy Swiss-Prot
Match: Q9SX77 (Succinate dehydrogenase subunit 5, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=SDH5 PE=1 SV=1)

HSP 1 Score: 251.1 bits (640), Expect = 1.2e-65
Identity = 126/187 (67.38%), Postives = 151/187 (80.75%), Query Frame = 0


Query: 57  VSSDCSYP--SGVGHARFFSADVVSMPTIGDPELKNVFKDLMAASWDKLPESVIYDVKTA 116
           VS D  YP   G+G  R FS DV  MP + D ++ N FKDLMAA W +LP +V+ D KTA
Sbjct: 71  VSRDLQYPRAMGMGQVRRFSEDVSHMPEMEDSDVLNAFKDLMAADWAELPSAVVKDAKTA 130

Query: 117 LSRSTDDKAGKEIVENVFRAAEAAEEFGDILINLKMEIDDSIGLSGENVKPLSDELKNAL 176
           +S++TDDKAG+E ++NVFRAAEA EEFG IL ++KMEIDDSIG+SGE VKPL +++ +AL
Sbjct: 131 ISKNTDDKAGQEALKNVFRAAEAVEEFGGILTSIKMEIDDSIGMSGEGVKPLPNDITDAL 190

Query: 177 RTVHDRYTAYLDSFGPEENYLRKKVETELGSKMIYLKMRCSGLGSEWGKVSVLGTSGLSG 236
           RT + RY  YLDSF PEE YL+KKVE ELG+KMI+LKMRCSGLGSEWGKV+VLGTSGLSG
Sbjct: 191 RTAYQRYAEYLDSFEPEEVYLKKKVEMELGTKMIHLKMRCSGLGSEWGKVTVLGTSGLSG 250

Query: 237 SYVEQRA 242
           SYVEQRA
Sbjct: 251 SYVEQRA 257

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BLAST of PI0010436 vs. ExPASy Swiss-Prot
Match: Q0JDA2 (Succinate dehydrogenase subunit 5, mitochondrial OS=Oryza sativa subsp. japonica OX=39947 GN=SDH5 PE=1 SV=1)

HSP 1 Score: 226.5 bits (576), Expect = 3.3e-58
Identity = 105/171 (61.40%), Postives = 140/171 (81.87%), Query Frame = 0


Query: 71  RFFSADVVSMPTIGDPELKNVFKDLMAASWDKLPESVIYDVKTALSRSTDDKAGKEIVEN 130
           R FS++   +P I DPE+++ FKDLMAASW  LP+S++ + K A S++TDDKAGKE + N
Sbjct: 61  RLFSSNEKHLPAISDPEVESAFKDLMAASWTGLPDSLVIEAKKAASKATDDKAGKEALLN 120

Query: 131 VFRAAEAAEEFGDILINLKMEIDDSIGLSGENVKPLSDELKNALRTVHDRYTAYLDSFGP 190
           VFRAAEA EEFG +L+ L+M +DD  G++GENV PL   +++A+++ + RY  YL+SFGP
Sbjct: 121 VFRAAEACEEFGGVLVTLRMALDDLCGITGENVGPLPGYIEDAVKSAYKRYMKYLESFGP 180

Query: 191 EENYLRKKVETELGSKMIYLKMRCSGLGSEWGKVSVLGTSGLSGSYVEQRA 242
           EENYLRKKVE ELG+KMI+LKMRCSG+GSEWGK++++GTSG+SGSYVE RA
Sbjct: 181 EENYLRKKVENELGTKMIHLKMRCSGVGSEWGKITLIGTSGISGSYVELRA 231

[Close]

BLAST of PI0010436 vs. ExPASy TrEMBL
Match: A0A0A0LP60 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G360050 PE=4 SV=1)

HSP 1 Score: 447.2 bits (1149), Expect = 4.3e-122
Identity = 228/241 (94.61%), Postives = 235/241 (97.51%), Query Frame = 0


Query: 1   MEKTVILRSLLRSVRARSYGIAGVTHRNLLQSNHQVARSFFYLSSHRSSFSDSPQRVSSD 60
           MEKTVILRSLLRSVRARSYGIAGVTHRNLLQSNHQVARSFFYLSSHR SFSDSPQRVSSD
Sbjct: 1   MEKTVILRSLLRSVRARSYGIAGVTHRNLLQSNHQVARSFFYLSSHRPSFSDSPQRVSSD 60

Query: 61  CSYPSGVGHARFFSADVVSMPTIGDPELKNVFKDLMAASWDKLPESVIYDVKTALSRSTD 120
           CSYPSGVGHAR+FSADVVSMPTI DP+L+NVFKDLMAASWDKLPE+VIYDVKTALS STD
Sbjct: 61  CSYPSGVGHARYFSADVVSMPTIEDPKLQNVFKDLMAASWDKLPEAVIYDVKTALSGSTD 120

Query: 121 DKAGKEIVENVFRAAEAAEEFGDILINLKMEIDDSIGLSGENVKPLSDELKNALRTVHDR 180
           DKAGKEIVENVFRAAEAAEEFGD+LINLKMEIDDSIGLSGENVKPLSDELK AL TVH+R
Sbjct: 121 DKAGKEIVENVFRAAEAAEEFGDMLINLKMEIDDSIGLSGENVKPLSDELKKALHTVHER 180

Query: 181 YTAYLDSFGPEENYLRKKVETELGSKMIYLKMRCSGLGSEWGKVSVLGTSGLSGSYVEQR 240
           Y AYLDSFGPEENYLRKKVETELG+KMIYLKMRCSGLGSEWGKVSVLGTSGLSGSYVEQR
Sbjct: 181 YIAYLDSFGPEENYLRKKVETELGTKMIYLKMRCSGLGSEWGKVSVLGTSGLSGSYVEQR 240

Query: 241 A 242
           A
Sbjct: 241 A 241

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BLAST of PI0010436 vs. ExPASy TrEMBL
Match: A0A1S3BAR6 (succinate dehydrogenase subunit 5, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103487909 PE=4 SV=1)

HSP 1 Score: 434.5 bits (1116), Expect = 2.9e-118
Identity = 224/241 (92.95%), Postives = 228/241 (94.61%), Query Frame = 0


Query: 1   MEKTVILRSLLRSVRARSYGIAGVTHRNLLQSNHQVARSFFYLSSHRSSFSDSPQRVSSD 60
           MEKTVILRSLLRSVRARSYGIAGVTHRNLLQSNHQVARS FYLSSHRSSFSDSPQRVS D
Sbjct: 1   MEKTVILRSLLRSVRARSYGIAGVTHRNLLQSNHQVARSVFYLSSHRSSFSDSPQRVSYD 60

Query: 61  CSYPSGVGHARFFSADVVSMPTIGDPELKNVFKDLMAASWDKLPESVIYDVKTALSRSTD 120
           CSYPSGVGHAR+FSADVVSMP I DP+L  VFKDLMAASWDKLPE VIY+ KTALS STD
Sbjct: 61  CSYPSGVGHARYFSADVVSMPAIQDPKLNIVFKDLMAASWDKLPEPVIYEAKTALSGSTD 120

Query: 121 DKAGKEIVENVFRAAEAAEEFGDILINLKMEIDDSIGLSGENVKPLSDELKNALRTVHDR 180
           DKAGKEIVENVFRAA AAEEFGDILINLKMEIDDSIGLSGENVKPLSDELK AL TVHDR
Sbjct: 121 DKAGKEIVENVFRAAVAAEEFGDILINLKMEIDDSIGLSGENVKPLSDELKKALHTVHDR 180

Query: 181 YTAYLDSFGPEENYLRKKVETELGSKMIYLKMRCSGLGSEWGKVSVLGTSGLSGSYVEQR 240
           Y AYLDSFGPEENYLRKKVETELG+KMIYLKMRCSGLGSEWGKVSVLGTSGLSGSYVEQR
Sbjct: 181 YIAYLDSFGPEENYLRKKVETELGTKMIYLKMRCSGLGSEWGKVSVLGTSGLSGSYVEQR 240

Query: 241 A 242
           A
Sbjct: 241 A 241

[Close]

BLAST of PI0010436 vs. ExPASy TrEMBL
Match: A0A6J1HCU3 (succinate dehydrogenase subunit 5, mitochondrial-like OS=Cucurbita moschata OX=3662 GN=LOC111462814 PE=4 SV=1)

HSP 1 Score: 403.3 bits (1035), Expect = 7.2e-109
Identity = 208/238 (87.39%), Postives = 222/238 (93.28%), Query Frame = 0


Query: 5   VILRSLLRSVRARSYGIAGVTHRNLLQSNHQVARSFFYLSSHRSSFSDSPQRVSS-DCSY 64
           VILRSLLRSVRARSY IAGVTHRNLLQS+HQ ARSFF LSSHRSSFSD P RVSS DC Y
Sbjct: 2   VILRSLLRSVRARSYVIAGVTHRNLLQSHHQAARSFFSLSSHRSSFSDFPPRVSSADCGY 61

Query: 65  PSGVGHARFFSADVVSMPTIGDPELKNVFKDLMAASWDKLPESVIYDVKTALSRSTDDKA 124
            SGV HARFFS DVV+MPTIGD +L+N FKDLMAASWD LPESV+YDVK ALS ST+DKA
Sbjct: 62  LSGVAHARFFSVDVVNMPTIGDTKLQNAFKDLMAASWDNLPESVVYDVKAALSGSTEDKA 121

Query: 125 GKEIVENVFRAAEAAEEFGDILINLKMEIDDSIGLSGENVKPLSDELKNALRTVHDRYTA 184
           GKEIVENVFRAAEAAE+FGDIL+NLKMEIDDSIG+SGE+VKPLSDELK AL+TV+DRYTA
Sbjct: 122 GKEIVENVFRAAEAAEDFGDILVNLKMEIDDSIGVSGEDVKPLSDELKKALQTVYDRYTA 181

Query: 185 YLDSFGPEENYLRKKVETELGSKMIYLKMRCSGLGSEWGKVSVLGTSGLSGSYVEQRA 242
           YLD+FGPEENYLRKKVETELG+KMIYLKMRCSGLGSEWGKVSVLGTSGLSGSYVEQRA
Sbjct: 182 YLDAFGPEENYLRKKVETELGTKMIYLKMRCSGLGSEWGKVSVLGTSGLSGSYVEQRA 239

[Close]

BLAST of PI0010436 vs. ExPASy TrEMBL
Match: A0A6J1CS25 (succinate dehydrogenase subunit 5, mitochondrial-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC111014059 PE=4 SV=1)

HSP 1 Score: 402.9 bits (1034), Expect = 9.4e-109
Identity = 204/241 (84.65%), Postives = 218/241 (90.46%), Query Frame = 0


Query: 1   MEKTVILRSLLRSVRARSYGIAGVTHRNLLQSNHQVARSFFYLSSHRSSFSDSPQRVSSD 60
           MEK +ILRSLLRSVR  SYG+AGV HRNLLQS+HQ ARS F+LSSHRSS SDS QRVSSD
Sbjct: 1   MEKMMILRSLLRSVRVGSYGVAGVRHRNLLQSHHQAARSLFHLSSHRSSVSDSLQRVSSD 60

Query: 61  CSYPSGVGHARFFSADVVSMPTIGDPELKNVFKDLMAASWDKLPESVIYDVKTALSRSTD 120
           C YPSGVG  RFFS DVV MPTI D +L+NVFKDLMA SWD+LP S++YDVK ALS STD
Sbjct: 61  CGYPSGVGRVRFFSVDVVHMPTIEDSKLQNVFKDLMATSWDELPNSIVYDVKAALSGSTD 120

Query: 121 DKAGKEIVENVFRAAEAAEEFGDILINLKMEIDDSIGLSGENVKPLSDELKNALRTVHDR 180
           DKAGKE+VENVFRAAEA EEFG ILINLKM+IDDSIGLSGE+VKPLSDELKNAL TVHDR
Sbjct: 121 DKAGKEVVENVFRAAEAVEEFGGILINLKMKIDDSIGLSGEDVKPLSDELKNALHTVHDR 180

Query: 181 YTAYLDSFGPEENYLRKKVETELGSKMIYLKMRCSGLGSEWGKVSVLGTSGLSGSYVEQR 240
           YT YLD+FGPEENYLRKKVETELG+KMIYLKMRCSGLGSEWGKVSVLGTSGLSGSYVEQR
Sbjct: 181 YTTYLDAFGPEENYLRKKVETELGTKMIYLKMRCSGLGSEWGKVSVLGTSGLSGSYVEQR 240

Query: 241 A 242
           A
Sbjct: 241 A 241

[Close]

BLAST of PI0010436 vs. ExPASy TrEMBL
Match: A0A6J1C282 (succinate dehydrogenase subunit 5, mitochondrial-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC111007602 PE=4 SV=1)

HSP 1 Score: 397.9 bits (1021), Expect = 3.0e-107
Identity = 203/241 (84.23%), Postives = 217/241 (90.04%), Query Frame = 0


Query: 1   MEKTVILRSLLRSVRARSYGIAGVTHRNLLQSNHQVARSFFYLSSHRSSFSDSPQRVSSD 60
           MEK VILRSLLRSVR  SYG+AGV HRNLLQS+HQ ARSFFYLSSHRSS SD PQRVSSD
Sbjct: 1   MEKMVILRSLLRSVRVGSYGVAGVRHRNLLQSHHQAARSFFYLSSHRSSLSDFPQRVSSD 60

Query: 61  CSYPSGVGHARFFSADVVSMPTIGDPELKNVFKDLMAASWDKLPESVIYDVKTALSRSTD 120
           C Y SGVG AR FS DVV M TI D +L+NVFKDLMA SWD+LP SV+YDVK ALS STD
Sbjct: 61  CCYLSGVGRARLFSVDVVRMATIEDSKLQNVFKDLMATSWDELPNSVVYDVKAALSGSTD 120

Query: 121 DKAGKEIVENVFRAAEAAEEFGDILINLKMEIDDSIGLSGENVKPLSDELKNALRTVHDR 180
           DKAGKE+VENVFRAAEA EEFG ILI+LKM+IDDSIGLSGE+VKPLSDELKNAL TVHDR
Sbjct: 121 DKAGKEVVENVFRAAEAVEEFGGILISLKMKIDDSIGLSGEDVKPLSDELKNALHTVHDR 180

Query: 181 YTAYLDSFGPEENYLRKKVETELGSKMIYLKMRCSGLGSEWGKVSVLGTSGLSGSYVEQR 240
           YT YLD+FGPEENYLRKKVET+LG+KMIYLK+RCSGLGSEWGKVSVLGTSGLSGSYVEQR
Sbjct: 181 YTTYLDAFGPEENYLRKKVETDLGTKMIYLKIRCSGLGSEWGKVSVLGTSGLSGSYVEQR 240

Query: 241 A 242
           A
Sbjct: 241 A 241

[Close]

BLAST of PI0010436 vs. NCBI nr
Match: XP_004152731.1 (succinate dehydrogenase subunit 5, mitochondrial [Cucumis sativus] >KGN62537.1 hypothetical protein Csa_021793 [Cucumis sativus])

HSP 1 Score: 447.2 bits (1149), Expect = 9.0e-122
Identity = 228/241 (94.61%), Postives = 235/241 (97.51%), Query Frame = 0


Query: 1   MEKTVILRSLLRSVRARSYGIAGVTHRNLLQSNHQVARSFFYLSSHRSSFSDSPQRVSSD 60
           MEKTVILRSLLRSVRARSYGIAGVTHRNLLQSNHQVARSFFYLSSHR SFSDSPQRVSSD
Sbjct: 1   MEKTVILRSLLRSVRARSYGIAGVTHRNLLQSNHQVARSFFYLSSHRPSFSDSPQRVSSD 60

Query: 61  CSYPSGVGHARFFSADVVSMPTIGDPELKNVFKDLMAASWDKLPESVIYDVKTALSRSTD 120
           CSYPSGVGHAR+FSADVVSMPTI DP+L+NVFKDLMAASWDKLPE+VIYDVKTALS STD
Sbjct: 61  CSYPSGVGHARYFSADVVSMPTIEDPKLQNVFKDLMAASWDKLPEAVIYDVKTALSGSTD 120

Query: 121 DKAGKEIVENVFRAAEAAEEFGDILINLKMEIDDSIGLSGENVKPLSDELKNALRTVHDR 180
           DKAGKEIVENVFRAAEAAEEFGD+LINLKMEIDDSIGLSGENVKPLSDELK AL TVH+R
Sbjct: 121 DKAGKEIVENVFRAAEAAEEFGDMLINLKMEIDDSIGLSGENVKPLSDELKKALHTVHER 180

Query: 181 YTAYLDSFGPEENYLRKKVETELGSKMIYLKMRCSGLGSEWGKVSVLGTSGLSGSYVEQR 240
           Y AYLDSFGPEENYLRKKVETELG+KMIYLKMRCSGLGSEWGKVSVLGTSGLSGSYVEQR
Sbjct: 181 YIAYLDSFGPEENYLRKKVETELGTKMIYLKMRCSGLGSEWGKVSVLGTSGLSGSYVEQR 240

Query: 241 A 242
           A
Sbjct: 241 A 241

[Close]

BLAST of PI0010436 vs. NCBI nr
Match: XP_008444638.1 (PREDICTED: succinate dehydrogenase subunit 5, mitochondrial [Cucumis melo])

HSP 1 Score: 434.5 bits (1116), Expect = 6.0e-118
Identity = 224/241 (92.95%), Postives = 228/241 (94.61%), Query Frame = 0


Query: 1   MEKTVILRSLLRSVRARSYGIAGVTHRNLLQSNHQVARSFFYLSSHRSSFSDSPQRVSSD 60
           MEKTVILRSLLRSVRARSYGIAGVTHRNLLQSNHQVARS FYLSSHRSSFSDSPQRVS D
Sbjct: 1   MEKTVILRSLLRSVRARSYGIAGVTHRNLLQSNHQVARSVFYLSSHRSSFSDSPQRVSYD 60

Query: 61  CSYPSGVGHARFFSADVVSMPTIGDPELKNVFKDLMAASWDKLPESVIYDVKTALSRSTD 120
           CSYPSGVGHAR+FSADVVSMP I DP+L  VFKDLMAASWDKLPE VIY+ KTALS STD
Sbjct: 61  CSYPSGVGHARYFSADVVSMPAIQDPKLNIVFKDLMAASWDKLPEPVIYEAKTALSGSTD 120

Query: 121 DKAGKEIVENVFRAAEAAEEFGDILINLKMEIDDSIGLSGENVKPLSDELKNALRTVHDR 180
           DKAGKEIVENVFRAA AAEEFGDILINLKMEIDDSIGLSGENVKPLSDELK AL TVHDR
Sbjct: 121 DKAGKEIVENVFRAAVAAEEFGDILINLKMEIDDSIGLSGENVKPLSDELKKALHTVHDR 180

Query: 181 YTAYLDSFGPEENYLRKKVETELGSKMIYLKMRCSGLGSEWGKVSVLGTSGLSGSYVEQR 240
           Y AYLDSFGPEENYLRKKVETELG+KMIYLKMRCSGLGSEWGKVSVLGTSGLSGSYVEQR
Sbjct: 181 YIAYLDSFGPEENYLRKKVETELGTKMIYLKMRCSGLGSEWGKVSVLGTSGLSGSYVEQR 240

Query: 241 A 242
           A
Sbjct: 241 A 241

[Close]

BLAST of PI0010436 vs. NCBI nr
Match: XP_038884886.1 (succinate dehydrogenase subunit 5, mitochondrial [Benincasa hispida])

HSP 1 Score: 426.0 bits (1094), Expect = 2.1e-115
Identity = 216/241 (89.63%), Postives = 227/241 (94.19%), Query Frame = 0


Query: 1   MEKTVILRSLLRSVRARSYGIAGVTHRNLLQSNHQVARSFFYLSSHRSSFSDSPQRVSSD 60
           MEK VILRSLLRSVRARSY IAGVT+RNLLQSNHQ ARSFFYLSSHRSSFSDSPQ+VSSD
Sbjct: 1   MEKMVILRSLLRSVRARSYAIAGVTYRNLLQSNHQAARSFFYLSSHRSSFSDSPQKVSSD 60

Query: 61  CSYPSGVGHARFFSADVVSMPTIGDPELKNVFKDLMAASWDKLPESVIYDVKTALSRSTD 120
           C Y SGVGHARFFS DVVSMPTIGD  L+N FKDLMAASWDKLPES++YDVK AL+ STD
Sbjct: 61  CGYLSGVGHARFFSVDVVSMPTIGDSNLRNAFKDLMAASWDKLPESLVYDVKAALTGSTD 120

Query: 121 DKAGKEIVENVFRAAEAAEEFGDILINLKMEIDDSIGLSGENVKPLSDELKNALRTVHDR 180
           DKAGKEIVENVFRAAEAAEEFG ILI++KMEIDDSIGLSGE+VKP+SDELKNALRTVHDR
Sbjct: 121 DKAGKEIVENVFRAAEAAEEFGGILISMKMEIDDSIGLSGEDVKPVSDELKNALRTVHDR 180

Query: 181 YTAYLDSFGPEENYLRKKVETELGSKMIYLKMRCSGLGSEWGKVSVLGTSGLSGSYVEQR 240
           Y  YLDSFGPEENYLRKKVETELG+KMIYLKMRCSGLGSEWGKVSVLGTSGLSGSYVEQR
Sbjct: 181 YVTYLDSFGPEENYLRKKVETELGTKMIYLKMRCSGLGSEWGKVSVLGTSGLSGSYVEQR 240

Query: 241 A 242
           A
Sbjct: 241 A 241

[Close]

BLAST of PI0010436 vs. NCBI nr
Match: KAG6598386.1 (Succinate dehydrogenase subunit 5, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 407.9 bits (1047), Expect = 6.0e-110
Identity = 208/237 (87.76%), Postives = 222/237 (93.67%), Query Frame = 0


Query: 5   VILRSLLRSVRARSYGIAGVTHRNLLQSNHQVARSFFYLSSHRSSFSDSPQRVSSDCSYP 64
           VILRSLLRSVRARSY IAGVTHRNLLQS+HQ ARSFF LSSHRSSFSD P RVSSDC Y 
Sbjct: 2   VILRSLLRSVRARSYVIAGVTHRNLLQSHHQAARSFFSLSSHRSSFSDFPPRVSSDCGYL 61

Query: 65  SGVGHARFFSADVVSMPTIGDPELKNVFKDLMAASWDKLPESVIYDVKTALSRSTDDKAG 124
           SGV HARFFS DVV+MPTIGD +L+N FKDLMAASWD LPESV+YDVK ALS ST+DKAG
Sbjct: 62  SGVAHARFFSVDVVNMPTIGDTKLQNAFKDLMAASWDNLPESVVYDVKAALSGSTEDKAG 121

Query: 125 KEIVENVFRAAEAAEEFGDILINLKMEIDDSIGLSGENVKPLSDELKNALRTVHDRYTAY 184
           KEIVENVFRAAEAAE+FGDIL+NLKMEIDDSIG+SGE+VKPLSDELK AL+TV+DRYTAY
Sbjct: 122 KEIVENVFRAAEAAEDFGDILVNLKMEIDDSIGVSGEDVKPLSDELKKALQTVYDRYTAY 181

Query: 185 LDSFGPEENYLRKKVETELGSKMIYLKMRCSGLGSEWGKVSVLGTSGLSGSYVEQRA 242
           LD+FGPEENYLRKKVETELG+KMIYLKMRCSGLGSEWGKVSVLGTSGLSGSYVEQRA
Sbjct: 182 LDAFGPEENYLRKKVETELGTKMIYLKMRCSGLGSEWGKVSVLGTSGLSGSYVEQRA 238

[Close]

BLAST of PI0010436 vs. NCBI nr
Match: XP_023546793.1 (succinate dehydrogenase subunit 5, mitochondrial-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 404.8 bits (1039), Expect = 5.1e-109
Identity = 208/237 (87.76%), Postives = 221/237 (93.25%), Query Frame = 0


Query: 5   VILRSLLRSVRARSYGIAGVTHRNLLQSNHQVARSFFYLSSHRSSFSDSPQRVSSDCSYP 64
           VILRSLLRSVRARSY IAGVTHRNLLQS+ Q ARSFF LSSHRSSFSD P RVSSDC Y 
Sbjct: 2   VILRSLLRSVRARSYVIAGVTHRNLLQSHRQAARSFFSLSSHRSSFSDFPLRVSSDCGYL 61

Query: 65  SGVGHARFFSADVVSMPTIGDPELKNVFKDLMAASWDKLPESVIYDVKTALSRSTDDKAG 124
           SGV HARFFS DVV+MPTIGD +L+N FKDLMAASWD LPESV+YDVK ALS ST+DKAG
Sbjct: 62  SGVAHARFFSVDVVNMPTIGDTKLQNAFKDLMAASWDNLPESVVYDVKAALSGSTEDKAG 121

Query: 125 KEIVENVFRAAEAAEEFGDILINLKMEIDDSIGLSGENVKPLSDELKNALRTVHDRYTAY 184
           KEIVENVFRAAEAAE+FGDILINLKMEIDDSIG+SGE+VKPLSDELK AL+TV+DRYTAY
Sbjct: 122 KEIVENVFRAAEAAEDFGDILINLKMEIDDSIGVSGEDVKPLSDELKKALQTVYDRYTAY 181

Query: 185 LDSFGPEENYLRKKVETELGSKMIYLKMRCSGLGSEWGKVSVLGTSGLSGSYVEQRA 242
           LD+FGPEENYLRKKVETELG+KMIYLKMRCSGLGSEWGKVSVLGTSGLSGSYVEQRA
Sbjct: 182 LDAFGPEENYLRKKVETELGTKMIYLKMRCSGLGSEWGKVSVLGTSGLSGSYVEQRA 238

[Close]

BLAST of PI0010436 vs. TAIR 10
Match: AT1G47420.1 (succinate dehydrogenase 5 )

HSP 1 Score: 251.1 bits (640), Expect = 8.8e-67
Identity = 126/187 (67.38%), Postives = 151/187 (80.75%), Query Frame = 0


Query: 57  VSSDCSYP--SGVGHARFFSADVVSMPTIGDPELKNVFKDLMAASWDKLPESVIYDVKTA 116
           VS D  YP   G+G  R FS DV  MP + D ++ N FKDLMAA W +LP +V+ D KTA
Sbjct: 71  VSRDLQYPRAMGMGQVRRFSEDVSHMPEMEDSDVLNAFKDLMAADWAELPSAVVKDAKTA 130

Query: 117 LSRSTDDKAGKEIVENVFRAAEAAEEFGDILINLKMEIDDSIGLSGENVKPLSDELKNAL 176
           +S++TDDKAG+E ++NVFRAAEA EEFG IL ++KMEIDDSIG+SGE VKPL +++ +AL
Sbjct: 131 ISKNTDDKAGQEALKNVFRAAEAVEEFGGILTSIKMEIDDSIGMSGEGVKPLPNDITDAL 190

Query: 177 RTVHDRYTAYLDSFGPEENYLRKKVETELGSKMIYLKMRCSGLGSEWGKVSVLGTSGLSG 236
           RT + RY  YLDSF PEE YL+KKVE ELG+KMI+LKMRCSGLGSEWGKV+VLGTSGLSG
Sbjct: 191 RTAYQRYAEYLDSFEPEEVYLKKKVEMELGTKMIHLKMRCSGLGSEWGKVTVLGTSGLSG 250

Query: 237 SYVEQRA 242
           SYVEQRA
Sbjct: 251 SYVEQRA 257

The following BLAST results are available for this feature:

BLAST of PI0010436 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SX77	1.2e-65	67.38	Succinate dehydrogenase subunit 5, mitochondrial OS=Arabidopsis thaliana OX=3702...	[more]
Q0JDA2	3.3e-58	61.40	Succinate dehydrogenase subunit 5, mitochondrial OS=Oryza sativa subsp. japonica...	[more]

BLAST of PI0010436 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LP60	4.3e-122	94.61	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G360050 PE=4 SV=1	[more]
A0A1S3BAR6	2.9e-118	92.95	succinate dehydrogenase subunit 5, mitochondrial OS=Cucumis melo OX=3656 GN=LOC1...	[more]
A0A6J1HCU3	7.2e-109	87.39	succinate dehydrogenase subunit 5, mitochondrial-like OS=Cucurbita moschata OX=3...	[more]
A0A6J1CS25	9.4e-109	84.65	succinate dehydrogenase subunit 5, mitochondrial-like isoform X1 OS=Momordica ch...	[more]
A0A6J1C282	3.0e-107	84.23	succinate dehydrogenase subunit 5, mitochondrial-like isoform X1 OS=Momordica ch...	[more]

BLAST of PI0010436 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004152731.1	9.0e-122	94.61	succinate dehydrogenase subunit 5, mitochondrial [Cucumis sativus] >KGN62537.1 h...	[more]
XP_008444638.1	6.0e-118	92.95	PREDICTED: succinate dehydrogenase subunit 5, mitochondrial [Cucumis melo]	[more]
XP_038884886.1	2.1e-115	89.63	succinate dehydrogenase subunit 5, mitochondrial [Benincasa hispida]	[more]
KAG6598386.1	6.0e-110	87.76	Succinate dehydrogenase subunit 5, mitochondrial, partial [Cucurbita argyrosperm...	[more]
XP_023546793.1	5.1e-109	87.76	succinate dehydrogenase subunit 5, mitochondrial-like isoform X2 [Cucurbita pepo...	[more]

BLAST of PI0010436 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G47420.1	8.8e-67	67.38	succinate dehydrogenase 5	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR025397	Succinate dehydrogenase subunit 5, mitochondrial	PFAM	PF14290	DUF4370	coord: 1..241 e-value: 1.1E-106 score: 356.0
IPR025397	Succinate dehydrogenase subunit 5, mitochondrial	PANTHER	PTHR36139	SUCCINATE DEHYDROGENASE SUBUNIT 5, MITOCHONDRIAL	coord: 2..241
None	No IPR available	PANTHER	PTHR36139:SF1	SUCCINATE DEHYDROGENASE SUBUNIT 5, MITOCHONDRIAL	coord: 2..241

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0010436.1	PI0010436.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006099	tricarboxylic acid cycle
cellular_component	GO:0045273	respiratory chain complex II