PI0010269 (gene) Melon (PI 482460) v1

Overview


Name	PI0010269
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	DNA-directed RNA polymerase III subunit rpc4-like
Location	chr07: 3255686 .. 3260738 (-)
RNA-Seq Expression	PI0010269
Synteny	PI0010269

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGAATCCCGATCCAACTCCTCCGCGCCGAAAGGTAATTAATATAATTTTTCAAATCACACCTAAATATCCTAAACTTCTTCTTCTTCTTCTTTAACTCGATTTAGATCTAAACCCTTCTCCTTCTGCAGGTAAAATTCGCTCCAAAATCCTCACAGCGCAAGAGGCCACCACAACCGGTTCAGAAAACGTACTCCTCTGAATCTCATCTTCTTCCACATTTTGAATTTGTAAAAACCTAATTTGTTTGGGGAATTGCTGCAGTGAAGATGAAGATGGTGAGGGTTATGTTGCTCAAACACGCTACCTCTTACGCCGTGCCAATGTAAGCTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAATAATGATTTTTCGAATTCTTTTGTGTGTTTTTGGTTTGATGTTTAGATGGTTTTTGGTTTGATGTTCTTCTGATCAGTTTAGATTTGGAGGATTTGTGATTTGTGTATAAAACATTTGAAAAGCTTTTCTTCTTCTACTTCTGCTTTTCCGTTTGGTTCCCGAGAAAATTGTTTCATGGAAATGAATACGTTTTTTCTTCTTTATTTTTCTTCCTGGGGAACGTTTGGGGTTTCTCTTTTCTTCTCGTTGATGAAAATTAAATTAAAGGTTAAAGTATTTGGTTAGTTTTAGTTAGGCTACGCTACAAAAAATGCCCCTCGAGTTAAAAAATTCTTAAAAATACGCTTAAATTTTGAAATGAGTACAAAAATATTCTTAACGTTAGTTTCAGATAAAAATCGGTAAAATTTTGTTTAAAAAAATATTCTTCAATTTTCAAAAGTTCCATAACTTAAAAAATAATGTTAAAAATACTCATGCTTATACGACAGAAATCGTTAATATTGTCTTACCACTCTATTTTCTATCTTTTTCTCATTTCCCATCTTCAATACCCTCTTACTTCTCTTTTCGTTAATTATTTGAGAGTTGTTTATGTAAAATAAATTAATAAAATTGCTCACTTTAATTAAGATATATAAACTATAATAAATAAAACATCAAATGATTTTAAGACTTAAATATTTTAACTAAATTGTATGTTAGTCGTTGAGTATGTGTTAATAGTCAAATACTATTTTATTTGACTATTTATTGTTTTGGTACGTTAACAAAATATTAAAGTAATAAAAATTGCTACATAATTATAACTTGCCAACTCAAACTCCAAAACCACTTTTCTGTTAGTCAACTAACAACCAAATTAATTCAAGGATCATTTAAAAGTATTTTTCAAACCTTGGGGACTAAGAAAAAATTTGGTGCATTCGGGATGCACCCATCTAGGTCTCTATCTTTCCATCACACCAAAATAAAATAAAAAACCACTTTTTATAAAAATAAGTTTTAATCTTGTTTTTGTGTGGTGGAGAGATGAAGAGTATGTAGATAGGTGCATCCCAGTATTGCCCGGGGAATAAATTGTTCCTTTTAAAAGTTCATGGACCAAATAGAAACTAATCTCAAACCTTAAGGACTGAAAATATATTTTGCCAATTAATTTTTAATGAACTGGGAAAATGTTTAGTAGTACTAATCTCCTTCTTAATTTGACCCGTCATCAAATATGTATTAATTTATTATTTATTTTCTTTATGAACTTCACATATTTCACATATTTTATATAAAAAAAATTTCATAAATGACCAAATGGTATTTTTTTTTTAAAAAAAAGAAATTATTTCTTATTTTAAGAAAACAGTTTCACTAATGTTAGTTGCTTAAAAAAAACGCTAATGTTAGTTTTTCATGTACTTATATAATTTAGCTTTTTTTTCCTTTGATGAACCTATATAATTTAGCATATGAGATACTATTAGGATGGATGGTTCAATCTCACCCTGCAATAATTAAAGAGGTTTATTAGTAAACTCACATTTCTCAACTCGTTATTCGCATCAACTTTCCTATAATAATTACCAGCTCAACTTAACTTTTATCGTGAACCAATTGTCCCTAAGGTTAAATTACAAATTTAATTCTTAAACTTCTATCTTTATATCTATGAGTTTCTAAACTTTAAATTTTGTGTCCAATAAGTCATTGACTAATTAAAAAATATTTAAAAATTAATTTCATTATTAGATATAAATTTCCTCTAGATATTCAATCTTTTGTTAGACGCAAAATTTCCAAACTATGTTTGAGTTTTATTTTAGCTATTTGGTTTTCTAGATGAGTTTTTTGTCTTTTTTAAAAAAGAAGATGAGTTTGTCCTTCTCTAGCTATATTTGAGTATTTTCTTTACGCTATTATGGATTATTTCTTTTTTTAATATTAATTTTATCAATTACCTTTTGGGTTTAGGCCTCAAAGTTAAAACTATGGACTTATTAAGTTCAAAGTAACATTTCATATCTTTTAAACAATATTGATATTACAATAGTACACATCACAACAATTTTCAACAATATCTTCATACGAAATAATTTTGTTTCATTTTTAGCGTCGTAGATTTATGTTCCTTGATCAAATACGATTTAATTCACCTTTAAAATATGTTAACATGTTCGAAACACATAGCTTATGAATGTAACTACATCCACCGATGATGGCCAGGTAATGAAACAATTGTTTGATTTTTCACTTTCTTTACGCATTGAAAGAGCATCGATTAGTGTTAGACAGTACAAGCTACCTGTTAAGAGTTAAAACAGCAAAGAAGCAACAATTGACACCTTAACTTTTGGCCTTAATATTTAACTGTAAGAATTGATTTGGTTTTCTTTCCACTTTGCAGGAGAATCTCGGAAAACGAGCGAACAAGGTCGAAAAAAATGTATGTGAAGTATTACTTCAAATTTTGAATTAATATCAATAGCTCTATATTGGTTTTTTAATATAATTTGGACGGATTATCCATGTAAACGTATTTGTTTTCATTCATAAGAGAGTGTGGGCTGCTACAATGTGTCTAATAATTTTGTAGAGTTGAATGTAGGAAGGAAAAAATTGCAAAAGTTCCTCGAACATTCGTATCTAATAATTATTAGGGGCATACAGATTTTTAAATCTACCTCCAACGATTCAATAATTTGTCATCACGAGAAAAGAAAATCCCAAGTTCTTAGCAAGGGAAGATGAAGTTTCCATTGTTGGCTTAAGATGATCTCTATTTTCATGTGCATCTCTGCAGCTTCAGTGCAAGTTGCATTCGGGCCTGGTGCTGAATCAACGTCATCTTCTATTAGAACATATGGAGTTCCCAAAGTAGAAAACGGTAGCAGAAAAAATGACATTGAGCCTGAAGTTGATGAAGATGAGGAGTTTGTCTTGCCAATGGCTATGGATGTTAACGAAGATGGGAAAGTTTTTGATAAAAAAACCAAAGATGGAATAGCTGAATCCTCTAGTTCGGCTGTAGTAACCAAGACCAAGAGGGATTACAAAGAACCTTGGGTAATCTCTTTTTCTCTATCTCACTGTTGACACACACACAAAGATTAACTTCCTGATTTCATGATACTTTTTCAGGATTACCAAAATTCTTACTATCCTACTACACTCCCTTTACGGATGCCTTACTCTGGAGATCCTGGTATGTCTTTATTCTTTCCCAAAGAGGAATAGCAGAAGTGTCACATTGTCCACCTTTCGTTTTTTGTTTGTGAAAACTGATAAGTGATTTATGATATGAAATAATCTCAACGGCATCTACATGTTTGTGAGTGATTTTGAAAGTTGCTATGAAACAATGTCTTTATTCATGAGTTTGATTTCACACTTTGAAGTACGAATATCTATACAATCACAATTGACTTTGAATCATTAGAACTATTTTCCGGAGCTATTCTTAAAATGACAAAAATGGTTTTAGTACTTAATCACGCAAAAGCTTATAATCAATCTTGAAAACAAAAGCAGACTTTTACGAGTCCTTAGATAAGGGATTGCTCATCTATGTTGAAATAAACTTTTGACCTTAGTGGAGGATCATTCTGGCTTTGTTCTGTAGTTCAGCTAACTCTTGCCTCTTGTTGGATTTAGAACGACTTGATGAAGCTGAGTTCGGGCAGGATGTGATGAATAGAGAGTATGATGAGAACTCTGTAATACCTGCCTTGGATCTCGGGTTGCAGGTGGGTGAATAAATTGGTAATTGTGGCTTATTTCATATATTAATCATTAGTGTTTTTCTATGCAGAATCTAGTAATATGGCGGTGTTTTGATGCAGGATGAAAACACAGAGAATACCAAGTACTTCTTTCAGCTTCCTGCACGACTTCCTTTACCCGAACAATCGGCTGCTGCAACAGGAAAGGAGAAAGTAGCAAATTTGAGATCTTCAAACAGCACAAGCTCATCCGATCTCGGCGATTTGAAGAAACTGTCTGCTGGATGTATGGGAAAACTTCTGATATACAAGAGTGGAGCTATTAAGTTGAGGCTGGGAGATATTCTTTACGATGTGAGTAACGTCGTTAGCTTTCTACAACCAAAATCAAGCATTGTCGAGTTCTTCTTCTTCTTCTTCTTTTTTTCTTTTTTTTTTTTTGTTGCTGCTGCCCATGTGTAGTTTAGATGTCATATATTGTGATTTATCTGTGTTTGGAATGCCTTTAATATGTTGTCTGCCACTCCAAATGGCTAATCGCGGCAAATCGAGGTCTAGGAATGACACCCTTGGTGGGGGTTCATGCCCTCGGAACCAAAGTTGTATTCGTATTTATGTTATTTACAATTTATGCTCTAAAGTTTAGGAGAGTGCACTATATAAACTCTAACTCAAGAGGCACTTGAATCTGTAAGTTGACACACTACTAAGAAATCACGTAAATGTCAATTCTCTATAGTTTACGTTTTCTGGTTATTTTTTAAGTTAATTTCTTAACAATTTGGTCCTGTTTTGCGGCTGTTGTAGGTTTCTCCTGGATCAAACTGCAGTTTTCTTCAACATGTTGTGGCAATCAACACTGAAGAGGGACAGTGCTGCGATCTCGGAGACATCGGCAAACGAGTTGTTGTAACACCGGATATTAGTTCCCTTTTAAATTCAGTGACTAATTTGAGATGA

mRNA sequence

ATGAAGAATCCCGATCCAACTCCTCCGCGCCGAAAGGTAAAATTCGCTCCAAAATCCTCACAGCGCAAGAGGCCACCACAACCGGTTCAGAAAACTGAAGATGAAGATGGTGAGGGTTATGTTGCTCAAACACGCTACCTCTTACGCCGTGCCAATGAGAATCTCGGAAAACGAGCGAACAAGGTCGAAAAAAATGTATCTTCAGTGCAAGTTGCATTCGGGCCTGGTGCTGAATCAACGTCATCTTCTATTAGAACATATGGAGTTCCCAAAGTAGAAAACGGTAGCAGAAAAAATGACATTGAGCCTGAAGTTGATGAAGATGAGGAGTTTGTCTTGCCAATGGCTATGGATGTTAACGAAGATGGGAAAGTTTTTGATAAAAAAACCAAAGATGGAATAGCTGAATCCTCTAGTTCGGCTGTAGTAACCAAGACCAAGAGGGATTACAAAGAACCTTGGGATTACCAAAATTCTTACTATCCTACTACACTCCCTTTACGGATGCCTTACTCTGGAGATCCTGAACGACTTGATGAAGCTGAGTTCGGGCAGGATGTGATGAATAGAGAGTATGATGAGAACTCTGTAATACCTGCCTTGGATCTCGGGTTGCAGGATGAAAACACAGAGAATACCAAGTACTTCTTTCAGCTTCCTGCACGACTTCCTTTACCCGAACAATCGGCTGCTGCAACAGGAAAGGAGAAAGTAGCAAATTTGAGATCTTCAAACAGCACAAGCTCATCCGATCTCGGCGATTTGAAGAAACTGTCTGCTGGATGTATGGGAAAACTTCTGATATACAAGAGTGGAGCTATTAAGTTGAGGCTGGGAGATATTCTTTACGATGTTTCTCCTGGATCAAACTGCAGTTTTCTTCAACATGTTGTGGCAATCAACACTGAAGAGGGACAGTGCTGCGATCTCGGAGACATCGGCAAACGAGTTGTTGTAACACCGGATATTAGTTCCCTTTTAAATTCAGTGACTAATTTGAGATGA

Coding sequence (CDS)

ATGAAGAATCCCGATCCAACTCCTCCGCGCCGAAAGGTAAAATTCGCTCCAAAATCCTCACAGCGCAAGAGGCCACCACAACCGGTTCAGAAAACTGAAGATGAAGATGGTGAGGGTTATGTTGCTCAAACACGCTACCTCTTACGCCGTGCCAATGAGAATCTCGGAAAACGAGCGAACAAGGTCGAAAAAAATGTATCTTCAGTGCAAGTTGCATTCGGGCCTGGTGCTGAATCAACGTCATCTTCTATTAGAACATATGGAGTTCCCAAAGTAGAAAACGGTAGCAGAAAAAATGACATTGAGCCTGAAGTTGATGAAGATGAGGAGTTTGTCTTGCCAATGGCTATGGATGTTAACGAAGATGGGAAAGTTTTTGATAAAAAAACCAAAGATGGAATAGCTGAATCCTCTAGTTCGGCTGTAGTAACCAAGACCAAGAGGGATTACAAAGAACCTTGGGATTACCAAAATTCTTACTATCCTACTACACTCCCTTTACGGATGCCTTACTCTGGAGATCCTGAACGACTTGATGAAGCTGAGTTCGGGCAGGATGTGATGAATAGAGAGTATGATGAGAACTCTGTAATACCTGCCTTGGATCTCGGGTTGCAGGATGAAAACACAGAGAATACCAAGTACTTCTTTCAGCTTCCTGCACGACTTCCTTTACCCGAACAATCGGCTGCTGCAACAGGAAAGGAGAAAGTAGCAAATTTGAGATCTTCAAACAGCACAAGCTCATCCGATCTCGGCGATTTGAAGAAACTGTCTGCTGGATGTATGGGAAAACTTCTGATATACAAGAGTGGAGCTATTAAGTTGAGGCTGGGAGATATTCTTTACGATGTTTCTCCTGGATCAAACTGCAGTTTTCTTCAACATGTTGTGGCAATCAACACTGAAGAGGGACAGTGCTGCGATCTCGGAGACATCGGCAAACGAGTTGTTGTAACACCGGATATTAGTTCCCTTTTAAATTCAGTGACTAATTTGAGATGA

Protein sequence

MKNPDPTPPRRKVKFAPKSSQRKRPPQPVQKTEDEDGEGYVAQTRYLLRRANENLGKRANKVEKNVSSVQVAFGPGAESTSSSIRTYGVPKVENGSRKNDIEPEVDEDEEFVLPMAMDVNEDGKVFDKKTKDGIAESSSSAVVTKTKRDYKEPWDYQNSYYPTTLPLRMPYSGDPERLDEAEFGQDVMNREYDENSVIPALDLGLQDENTENTKYFFQLPARLPLPEQSAAATGKEKVANLRSSNSTSSSDLGDLKKLSAGCMGKLLIYKSGAIKLRLGDILYDVSPGSNCSFLQHVVAINTEEGQCCDLGDIGKRVVVTPDISSLLNSVTNLR

Homology

[Close]

BLAST of PI0010269 vs. ExPASy Swiss-Prot
Match: Q91WD1 (DNA-directed RNA polymerase III subunit RPC4 OS=Mus musculus OX=10090 GN=Polr3d PE=2 SV=2)

HSP 1 Score: 61.2 bits (147), Expect = 2.5e-08
Identity = 32/77 (41.56%), Postives = 50/77 (64.94%), Query Frame = 0


Query: 255 LKKLSAGCMGKLLIYKSGAIKLRLGDILYDVSPGSNCSFLQHVVAI---NTEEGQCCDLG 314
           L  L+ G +GKLLI KSG ++L LG +  DV+ G+ CSFLQ +V++   ++  G+   LG
Sbjct: 318 LADLTEGQVGKLLIRKSGKVQLLLGKVTLDVTMGTTCSFLQELVSVGLGDSRTGEMTVLG 377

Query: 315 DIGKRVVVTPDISSLLN 329
            +  ++V +PD  SLL+
Sbjct: 378 HVKHKLVCSPDFESLLD 394

[Close]

BLAST of PI0010269 vs. ExPASy Swiss-Prot
Match: P05423 (DNA-directed RNA polymerase III subunit RPC4 OS=Homo sapiens OX=9606 GN=POLR3D PE=1 SV=2)

HSP 1 Score: 60.5 bits (145), Expect = 4.3e-08
Identity = 32/77 (41.56%), Postives = 50/77 (64.94%), Query Frame = 0


Query: 255 LKKLSAGCMGKLLIYKSGAIKLRLGDILYDVSPGSNCSFLQHVVAI---NTEEGQCCDLG 314
           L  L+ G +GKLLI KSG ++L LG +  DV+ G+ CSFLQ +V++   ++  G+   LG
Sbjct: 318 LADLTEGQVGKLLIRKSGRVQLLLGKVTLDVTMGTACSFLQELVSVGLGDSRTGEMTVLG 377

Query: 315 DIGKRVVVTPDISSLLN 329
            +  ++V +PD  SLL+
Sbjct: 378 HVKHKLVCSPDFESLLD 394

[Close]

BLAST of PI0010269 vs. ExPASy Swiss-Prot
Match: Q5E9Z7 (DNA-directed RNA polymerase III subunit RPC4 OS=Bos taurus OX=9913 GN=POLR3D PE=2 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 2.1e-07
Identity = 36/97 (37.11%), Postives = 56/97 (57.73%), Query Frame = 0


Query: 235 KEKVANLRSSNSTSSSDLGDLKKLSAGCMGKLLIYKSGAIKLRLGDILYDVSPGSNCSFL 294
           K++ A L  +  T       L  L+ G +GKLLI KSG ++L LG +  DV+ G+ CSFL
Sbjct: 305 KDREARLAENTCT-------LADLTEGQVGKLLIRKSGKVQLLLGKVTLDVTMGTTCSFL 364

Query: 295 QHVVAI---NTEEGQCCDLGDIGKRVVVTPDISSLLN 329
           Q +V++   ++  G    LG I  ++V +P+  SLL+
Sbjct: 365 QELVSVGLGDSRTGDMTVLGHIKHKLVCSPNFESLLD 394

[Close]

BLAST of PI0010269 vs. ExPASy Swiss-Prot
Match: P25441 (DNA-directed RNA polymerase III subunit RPC4 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=RPC53 PE=1 SV=2)

HSP 1 Score: 56.6 bits (135), Expect = 6.2e-07
Identity = 36/119 (30.25%), Postives = 66/119 (55.46%), Query Frame = 0


Query: 217 FQLPARLPLPEQSAAATGKEKVANLRSSNSTSSSDLGDLKKLS----------AGCMGKL 276
           FQLP RLP  E+ A    KE+  ++ +  S  S    ++KK            AG +G +
Sbjct: 307 FQLPTRLPAFERPAV---KEEKEDMETQASDPSKKKKNIKKKDTKDALSTRELAGKVGSI 366

Query: 277 LIYKSGAIKLRLGDILYDVSPGSNCSFLQHVVAIN-TEEGQCCD-LGDIGKRVVVTPDI 324
            ++KSG + +++G+++ D+  G+  +FLQ V+A++  ++    + LG +  ++VVTP I
Sbjct: 367 RVHKSGKLSVKIGNVVMDIGKGAETTFLQDVIALSIADDASSAELLGRVDGKIVVTPQI 422

[Close]

BLAST of PI0010269 vs. ExPASy Swiss-Prot
Match: Q8T1V7 (DNA-directed RNA polymerase III subunit rpc4 OS=Dictyostelium discoideum OX=44689 GN=polr3d PE=3 SV=2)

HSP 1 Score: 49.7 bits (117), Expect = 7.6e-05
Identity = 27/77 (35.06%), Postives = 41/77 (53.25%), Query Frame = 0


Query: 255 LKKLSAGCMGKLLIYKSGAIKLRLGDILYDVSPGSNCSFLQHVVAINTEEG-----QCCD 314
           +K++ +G +G L IYKSG   L++G + YD+S G    FL+ V    T+ G      C  
Sbjct: 351 IKEMPSGKLGTLKIYKSGKSILKIGTVEYDISSGDKLKFLEEVQCFQTKGGPDNSPTCYT 410

Query: 315 LGDIGKRVVVTPDISSL 327
           LG   + +V  P IS +
Sbjct: 411 LGIPSQHLVAAPIISQI 427

[Close]

BLAST of PI0010269 vs. ExPASy TrEMBL
Match: A0A5A7TN83 (DNA-directed RNA polymerase III subunit rpc4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold46G004050 PE=4 SV=1)

HSP 1 Score: 604.0 bits (1556), Expect = 3.8e-169
Identity = 313/335 (93.43%), Postives = 322/335 (96.12%), Query Frame = 0


Query: 1   MKNPDPTPPRRKVKFAPKSSQRKR-PPQPVQKTEDEDGEGYVAQTRYLLRRANENLGKRA 60
           MKN D +PPRRKVKFAPKSSQR+R PP PVQKTEDEDGEGYVAQTRYLLRRANENLGKRA
Sbjct: 1   MKNQDSSPPRRKVKFAPKSSQRRRPPPPPVQKTEDEDGEGYVAQTRYLLRRANENLGKRA 60

Query: 61  NKVEKNVSSVQVAFGPGAESTSSSIRTYGVPKVENGSRKNDIEPEVDEDEEFVLPMAMDV 120
           NKVE+  SSVQVAFGPGAESTSSSIRTYGVPKVENGSRKNDIEPEVDEDEEFVLP+AMDV
Sbjct: 61  NKVERK-SSVQVAFGPGAESTSSSIRTYGVPKVENGSRKNDIEPEVDEDEEFVLPVAMDV 120

Query: 121 NEDGKVFDKKTKDGIAESSSSAVVTKTKRDYKEPWDYQNSYYPTTLPLRMPYSGDPERLD 180
           NEDGK FDKKTKDGIAESSSSA+VTKTKRDYKEPWDYQNSYYPTTLPLRMPYSGDPERLD
Sbjct: 121 NEDGKFFDKKTKDGIAESSSSAMVTKTKRDYKEPWDYQNSYYPTTLPLRMPYSGDPERLD 180

Query: 181 EAEFGQDVMNREYDENSVIPALDLGLQDENTENTKYFFQLPARLPLPEQSAAATGKEKVA 240
           EAEFGQD MNREYDENSVIPALDLGLQDENTENTKYFFQLPARLPLP+QS+ ATGKEKV 
Sbjct: 181 EAEFGQDAMNREYDENSVIPALDLGLQDENTENTKYFFQLPARLPLPKQSSTATGKEKVG 240

Query: 241 NLRSSNSTSSSDLGDLKKLSAGCMGKLLIYKSGAIKLRLGDILYDVSPGSNCSFLQHVVA 300
           N RSSNSTSSSDL DLKKLSAGCMGKLLIYKSGAIKLRLGDILYDVS GS+CSFLQHVVA
Sbjct: 241 NSRSSNSTSSSDLDDLKKLSAGCMGKLLIYKSGAIKLRLGDILYDVSSGSDCSFLQHVVA 300

Query: 301 INTEEGQCCDLGDIGKRVVVTPDISSLLNSVTNLR 335
           INTE+GQCCDLGDIGKRVVVTPDISSLLNSVTNLR
Sbjct: 301 INTEKGQCCDLGDIGKRVVVTPDISSLLNSVTNLR 334

[Close]

BLAST of PI0010269 vs. ExPASy TrEMBL
Match: A0A0A0KZ61 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G022870 PE=4 SV=1)

HSP 1 Score: 601.7 bits (1550), Expect = 1.9e-168
Identity = 313/335 (93.43%), Postives = 319/335 (95.22%), Query Frame = 0


Query: 1   MKNPDPTPPRRKVKFAPKSSQRKR-PPQPVQKTEDEDGEGYVAQTRYLLRRANENLGKRA 60
           MKN DP+PPRRKVKFAPKSSQRKR PP PVQKTEDEDGEGYVAQTRYLLRRANENLGKRA
Sbjct: 1   MKNSDPSPPRRKVKFAPKSSQRKRPPPPPVQKTEDEDGEGYVAQTRYLLRRANENLGKRA 60

Query: 61  NKVEKNVSSVQVAFGPGAESTSSSIRTYGVPKVENGSRKNDIEPEVDEDEEFVLPMAMDV 120
           NKVEK  SSVQVAFGPGAESTSSSIRTYGVPKVENGSRKNDIEPEVDEDEEFVLP+A DV
Sbjct: 61  NKVEKK-SSVQVAFGPGAESTSSSIRTYGVPKVENGSRKNDIEPEVDEDEEFVLPVARDV 120

Query: 121 NEDGKVFDKKTKDGIAESSSSAVVTKTKRDYKEPWDYQNSYYPTTLPLRMPYSGDPERLD 180
           NEDGK FDKKTKDGI ESSSSA+ TKTKRDYKEPWDYQNSYYPTTLPLRMPYSGDPERLD
Sbjct: 121 NEDGKYFDKKTKDGITESSSSAMETKTKRDYKEPWDYQNSYYPTTLPLRMPYSGDPERLD 180

Query: 181 EAEFGQDVMNREYDENSVIPALDLGLQDENTENTKYFFQLPARLPLPEQSAAATGKEKVA 240
           EAEFGQDVMNREYDENSVIPALDLGL DENTE+TKYFFQLPARLPLP+QS+ ATGKEKV 
Sbjct: 181 EAEFGQDVMNREYDENSVIPALDLGLLDENTESTKYFFQLPARLPLPKQSSTATGKEKVG 240

Query: 241 NLRSSNSTSSSDLGDLKKLSAGCMGKLLIYKSGAIKLRLGDILYDVSPGSNCSFLQHVVA 300
           N RSSNSTSSSDL DLKKLSAGCMGKLLIYKSGAIKLRLGDILYDVS GSNCSFLQHVVA
Sbjct: 241 NSRSSNSTSSSDLDDLKKLSAGCMGKLLIYKSGAIKLRLGDILYDVSSGSNCSFLQHVVA 300

Query: 301 INTEEGQCCDLGDIGKRVVVTPDISSLLNSVTNLR 335
           INTEEGQCCDLGDIG RVVVTPDISSLLNSVTNLR
Sbjct: 301 INTEEGQCCDLGDIGNRVVVTPDISSLLNSVTNLR 334

[Close]

BLAST of PI0010269 vs. ExPASy TrEMBL
Match: A0A1S3BYJ9 (DNA-directed RNA polymerase III subunit rpc4-like OS=Cucumis melo OX=3656 GN=LOC103494480 PE=4 SV=1)

HSP 1 Score: 601.7 bits (1550), Expect = 1.9e-168
Identity = 313/335 (93.43%), Postives = 321/335 (95.82%), Query Frame = 0


Query: 1   MKNPDPTPPRRKVKFAPKSSQRKR-PPQPVQKTEDEDGEGYVAQTRYLLRRANENLGKRA 60
           MKN D +PPRRKVKFAPKSSQR+R PP PVQKTEDEDGEGYVAQTRYLLRRANENLGKRA
Sbjct: 1   MKNQDSSPPRRKVKFAPKSSQRRRPPPPPVQKTEDEDGEGYVAQTRYLLRRANENLGKRA 60

Query: 61  NKVEKNVSSVQVAFGPGAESTSSSIRTYGVPKVENGSRKNDIEPEVDEDEEFVLPMAMDV 120
           NKVEK  SSVQVAFGPGAESTSSSIRTYGVPKVENGSRKNDIEPEVDEDEEFVLP+AMDV
Sbjct: 61  NKVEKK-SSVQVAFGPGAESTSSSIRTYGVPKVENGSRKNDIEPEVDEDEEFVLPVAMDV 120

Query: 121 NEDGKVFDKKTKDGIAESSSSAVVTKTKRDYKEPWDYQNSYYPTTLPLRMPYSGDPERLD 180
           NEDGK FDKKTKDGIAESSSSA+VTKTKRDYKEPWDYQNSYYPTTLPLRMPYSGD ERLD
Sbjct: 121 NEDGKFFDKKTKDGIAESSSSAMVTKTKRDYKEPWDYQNSYYPTTLPLRMPYSGDHERLD 180

Query: 181 EAEFGQDVMNREYDENSVIPALDLGLQDENTENTKYFFQLPARLPLPEQSAAATGKEKVA 240
           EAEFGQD MNREYDENSVIPALDLGLQDENTENTKYFFQLPARLPLP+QS+ ATGKEKV 
Sbjct: 181 EAEFGQDAMNREYDENSVIPALDLGLQDENTENTKYFFQLPARLPLPKQSSTATGKEKVG 240

Query: 241 NLRSSNSTSSSDLGDLKKLSAGCMGKLLIYKSGAIKLRLGDILYDVSPGSNCSFLQHVVA 300
           N RSSNSTSSSDL DLKKLSAGCMGKLLIYKSGAIKLRLGDILYDVS GS+CSFLQHVVA
Sbjct: 241 NSRSSNSTSSSDLDDLKKLSAGCMGKLLIYKSGAIKLRLGDILYDVSSGSDCSFLQHVVA 300

Query: 301 INTEEGQCCDLGDIGKRVVVTPDISSLLNSVTNLR 335
           INTE+GQCCDLGDIGKRVVVTPDISSLLNSVTNLR
Sbjct: 301 INTEKGQCCDLGDIGKRVVVTPDISSLLNSVTNLR 334

[Close]

BLAST of PI0010269 vs. ExPASy TrEMBL
Match: A0A5D3D2X2 (Ribosomal protein L15 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold130G00760 PE=3 SV=1)

HSP 1 Score: 572.4 bits (1474), Expect = 1.2e-159
Identity = 297/319 (93.10%), Postives = 305/319 (95.61%), Query Frame = 0


Query: 1   MKNPDPTPPRRKVKFAPKSSQRKR-PPQPVQKTEDEDGEGYVAQTRYLLRRANENLGKRA 60
           MKN D +PPRRKVKFAPKSSQR+R PP PVQKTEDEDGEGYVAQTRYLLRRANENLGKRA
Sbjct: 1   MKNQDSSPPRRKVKFAPKSSQRRRPPPPPVQKTEDEDGEGYVAQTRYLLRRANENLGKRA 60

Query: 61  NKVEKNVSSVQVAFGPGAESTSSSIRTYGVPKVENGSRKNDIEPEVDEDEEFVLPMAMDV 120
           NKVEK  SSVQVAFGPGAESTSSSIRTYGVPKVENGSRKNDIEPEVDEDEEFVLP+AMDV
Sbjct: 61  NKVEKK-SSVQVAFGPGAESTSSSIRTYGVPKVENGSRKNDIEPEVDEDEEFVLPVAMDV 120

Query: 121 NEDGKVFDKKTKDGIAESSSSAVVTKTKRDYKEPWDYQNSYYPTTLPLRMPYSGDPERLD 180
           NEDGK FDKKTKDGIAESSSSA+VTKTKRDYKEPWDYQNSYYPTTLPLRMPYSGD ERLD
Sbjct: 121 NEDGKFFDKKTKDGIAESSSSAMVTKTKRDYKEPWDYQNSYYPTTLPLRMPYSGDHERLD 180

Query: 181 EAEFGQDVMNREYDENSVIPALDLGLQDENTENTKYFFQLPARLPLPEQSAAATGKEKVA 240
           EAEFGQD MNREYDENSVIPALDLGLQDENTENTKYFFQLPARLPLP+QS+ ATGKEKV 
Sbjct: 181 EAEFGQDAMNREYDENSVIPALDLGLQDENTENTKYFFQLPARLPLPKQSSTATGKEKVG 240

Query: 241 NLRSSNSTSSSDLGDLKKLSAGCMGKLLIYKSGAIKLRLGDILYDVSPGSNCSFLQHVVA 300
           N RSSNSTSSSDL DLKKLSAGCMGKLLIYKSGAIKLRLGDILYDVS GS+CSFLQHVVA
Sbjct: 241 NSRSSNSTSSSDLDDLKKLSAGCMGKLLIYKSGAIKLRLGDILYDVSSGSDCSFLQHVVA 300

Query: 301 INTEEGQCCDLGDIGKRVV 319
           INTE+GQCCDLGDIGKRVV
Sbjct: 301 INTEKGQCCDLGDIGKRVV 318

[Close]

BLAST of PI0010269 vs. ExPASy TrEMBL
Match: A0A6J1E8A8 (DNA-directed RNA polymerase III subunit rpc4-like OS=Cucurbita moschata OX=3662 GN=LOC111430793 PE=4 SV=1)

HSP 1 Score: 470.7 bits (1210), Expect = 5.1e-129
Identity = 250/335 (74.63%), Postives = 277/335 (82.69%), Query Frame = 0


Query: 1   MKNPDPTPPRRKVKFAPKSSQRKRPPQPVQKTEDEDGEGYVAQTRYLLRRANENLGKRAN 60
           MKNPDP+PPRRK+KFAPKS+ R+RPP P  KTEDED  G VAQTRYLLRRA ENLGKR N
Sbjct: 1   MKNPDPSPPRRKIKFAPKSTPRRRPP-PAPKTEDEDVVGNVAQTRYLLRRATENLGKRGN 60

Query: 61  KVEKNVSSVQVAFGPGAEST--SSSIRTYGVPKVENGSRKNDIEPEVDEDEEFVLPMAMD 120
           KVEK  SSVQVAFGPGA S   SSSIRTYGVPK+ N SRK DIEPE  EDEE +LP  MD
Sbjct: 61  KVEKK-SSVQVAFGPGAASASESSSIRTYGVPKIGNSSRKKDIEPESAEDEELILPPPMD 120

Query: 121 VNEDGKVFDKKTKDGIAESSSSAVVTKTKRDYKEPWDYQNSYYPTTLPLRMPYSGDPERL 180
             E GK  ++KT+D           TK  +DYKEPWDY NSYYPTTLPLRMPYSGDPE L
Sbjct: 121 FEEYGKNLNEKTED----------ATKNTKDYKEPWDYHNSYYPTTLPLRMPYSGDPEML 180

Query: 181 DEAEFGQDVMNREYDENSVIPALDLGLQDENTENTKYFFQLPARLPLPEQSAAATGKEKV 240
           DEAEFGQDVM+REYDENS IPALDLGL DEN+ENT+YFFQLPA LP P++S+ +TGKEKV
Sbjct: 181 DEAEFGQDVMDREYDENSSIPALDLGLLDENSENTRYFFQLPACLPFPKRSSTSTGKEKV 240

Query: 241 ANLRSSNSTSSSDLGDLKKLSAGCMGKLLIYKSGAIKLRLGDILYDVSPGSNCSFLQHVV 300
            NLRSS ST+SS+LGDL+ L  G MGKLLIYKSGA+KLRLGD LYDVS G +CSFLQHVV
Sbjct: 241 GNLRSSISTASSELGDLRNLPGGYMGKLLIYKSGAVKLRLGDTLYDVSSGLDCSFLQHVV 300

Query: 301 AINTEEGQCCDLGDIGKRVVVTPDISSLLNSVTNL 334
           AINT++GQCCDLG+IGKRVVVTPDI SLLNS+T+L
Sbjct: 301 AINTDKGQCCDLGEIGKRVVVTPDIGSLLNSMTDL 323

[Close]

BLAST of PI0010269 vs. NCBI nr
Match: KAA0044650.1 (DNA-directed RNA polymerase III subunit rpc4-like [Cucumis melo var. makuwa])

HSP 1 Score: 604.0 bits (1556), Expect = 7.9e-169
Identity = 313/335 (93.43%), Postives = 322/335 (96.12%), Query Frame = 0


Query: 1   MKNPDPTPPRRKVKFAPKSSQRKR-PPQPVQKTEDEDGEGYVAQTRYLLRRANENLGKRA 60
           MKN D +PPRRKVKFAPKSSQR+R PP PVQKTEDEDGEGYVAQTRYLLRRANENLGKRA
Sbjct: 1   MKNQDSSPPRRKVKFAPKSSQRRRPPPPPVQKTEDEDGEGYVAQTRYLLRRANENLGKRA 60

Query: 61  NKVEKNVSSVQVAFGPGAESTSSSIRTYGVPKVENGSRKNDIEPEVDEDEEFVLPMAMDV 120
           NKVE+  SSVQVAFGPGAESTSSSIRTYGVPKVENGSRKNDIEPEVDEDEEFVLP+AMDV
Sbjct: 61  NKVERK-SSVQVAFGPGAESTSSSIRTYGVPKVENGSRKNDIEPEVDEDEEFVLPVAMDV 120

Query: 121 NEDGKVFDKKTKDGIAESSSSAVVTKTKRDYKEPWDYQNSYYPTTLPLRMPYSGDPERLD 180
           NEDGK FDKKTKDGIAESSSSA+VTKTKRDYKEPWDYQNSYYPTTLPLRMPYSGDPERLD
Sbjct: 121 NEDGKFFDKKTKDGIAESSSSAMVTKTKRDYKEPWDYQNSYYPTTLPLRMPYSGDPERLD 180

Query: 181 EAEFGQDVMNREYDENSVIPALDLGLQDENTENTKYFFQLPARLPLPEQSAAATGKEKVA 240
           EAEFGQD MNREYDENSVIPALDLGLQDENTENTKYFFQLPARLPLP+QS+ ATGKEKV 
Sbjct: 181 EAEFGQDAMNREYDENSVIPALDLGLQDENTENTKYFFQLPARLPLPKQSSTATGKEKVG 240

Query: 241 NLRSSNSTSSSDLGDLKKLSAGCMGKLLIYKSGAIKLRLGDILYDVSPGSNCSFLQHVVA 300
           N RSSNSTSSSDL DLKKLSAGCMGKLLIYKSGAIKLRLGDILYDVS GS+CSFLQHVVA
Sbjct: 241 NSRSSNSTSSSDLDDLKKLSAGCMGKLLIYKSGAIKLRLGDILYDVSSGSDCSFLQHVVA 300

Query: 301 INTEEGQCCDLGDIGKRVVVTPDISSLLNSVTNLR 335
           INTE+GQCCDLGDIGKRVVVTPDISSLLNSVTNLR
Sbjct: 301 INTEKGQCCDLGDIGKRVVVTPDISSLLNSVTNLR 334

[Close]

BLAST of PI0010269 vs. NCBI nr
Match: XP_004146914.1 (DNA-directed RNA polymerase III subunit rpc4 [Cucumis sativus] >KGN53151.1 hypothetical protein Csa_015254 [Cucumis sativus])

HSP 1 Score: 601.7 bits (1550), Expect = 3.9e-168
Identity = 313/335 (93.43%), Postives = 319/335 (95.22%), Query Frame = 0


Query: 1   MKNPDPTPPRRKVKFAPKSSQRKR-PPQPVQKTEDEDGEGYVAQTRYLLRRANENLGKRA 60
           MKN DP+PPRRKVKFAPKSSQRKR PP PVQKTEDEDGEGYVAQTRYLLRRANENLGKRA
Sbjct: 1   MKNSDPSPPRRKVKFAPKSSQRKRPPPPPVQKTEDEDGEGYVAQTRYLLRRANENLGKRA 60

Query: 61  NKVEKNVSSVQVAFGPGAESTSSSIRTYGVPKVENGSRKNDIEPEVDEDEEFVLPMAMDV 120
           NKVEK  SSVQVAFGPGAESTSSSIRTYGVPKVENGSRKNDIEPEVDEDEEFVLP+A DV
Sbjct: 61  NKVEKK-SSVQVAFGPGAESTSSSIRTYGVPKVENGSRKNDIEPEVDEDEEFVLPVARDV 120

Query: 121 NEDGKVFDKKTKDGIAESSSSAVVTKTKRDYKEPWDYQNSYYPTTLPLRMPYSGDPERLD 180
           NEDGK FDKKTKDGI ESSSSA+ TKTKRDYKEPWDYQNSYYPTTLPLRMPYSGDPERLD
Sbjct: 121 NEDGKYFDKKTKDGITESSSSAMETKTKRDYKEPWDYQNSYYPTTLPLRMPYSGDPERLD 180

Query: 181 EAEFGQDVMNREYDENSVIPALDLGLQDENTENTKYFFQLPARLPLPEQSAAATGKEKVA 240
           EAEFGQDVMNREYDENSVIPALDLGL DENTE+TKYFFQLPARLPLP+QS+ ATGKEKV 
Sbjct: 181 EAEFGQDVMNREYDENSVIPALDLGLLDENTESTKYFFQLPARLPLPKQSSTATGKEKVG 240

Query: 241 NLRSSNSTSSSDLGDLKKLSAGCMGKLLIYKSGAIKLRLGDILYDVSPGSNCSFLQHVVA 300
           N RSSNSTSSSDL DLKKLSAGCMGKLLIYKSGAIKLRLGDILYDVS GSNCSFLQHVVA
Sbjct: 241 NSRSSNSTSSSDLDDLKKLSAGCMGKLLIYKSGAIKLRLGDILYDVSSGSNCSFLQHVVA 300

Query: 301 INTEEGQCCDLGDIGKRVVVTPDISSLLNSVTNLR 335
           INTEEGQCCDLGDIG RVVVTPDISSLLNSVTNLR
Sbjct: 301 INTEEGQCCDLGDIGNRVVVTPDISSLLNSVTNLR 334

[Close]

BLAST of PI0010269 vs. NCBI nr
Match: XP_008453902.1 (PREDICTED: DNA-directed RNA polymerase III subunit rpc4-like [Cucumis melo])

HSP 1 Score: 601.7 bits (1550), Expect = 3.9e-168
Identity = 313/335 (93.43%), Postives = 321/335 (95.82%), Query Frame = 0


Query: 1   MKNPDPTPPRRKVKFAPKSSQRKR-PPQPVQKTEDEDGEGYVAQTRYLLRRANENLGKRA 60
           MKN D +PPRRKVKFAPKSSQR+R PP PVQKTEDEDGEGYVAQTRYLLRRANENLGKRA
Sbjct: 1   MKNQDSSPPRRKVKFAPKSSQRRRPPPPPVQKTEDEDGEGYVAQTRYLLRRANENLGKRA 60

Query: 61  NKVEKNVSSVQVAFGPGAESTSSSIRTYGVPKVENGSRKNDIEPEVDEDEEFVLPMAMDV 120
           NKVEK  SSVQVAFGPGAESTSSSIRTYGVPKVENGSRKNDIEPEVDEDEEFVLP+AMDV
Sbjct: 61  NKVEKK-SSVQVAFGPGAESTSSSIRTYGVPKVENGSRKNDIEPEVDEDEEFVLPVAMDV 120

Query: 121 NEDGKVFDKKTKDGIAESSSSAVVTKTKRDYKEPWDYQNSYYPTTLPLRMPYSGDPERLD 180
           NEDGK FDKKTKDGIAESSSSA+VTKTKRDYKEPWDYQNSYYPTTLPLRMPYSGD ERLD
Sbjct: 121 NEDGKFFDKKTKDGIAESSSSAMVTKTKRDYKEPWDYQNSYYPTTLPLRMPYSGDHERLD 180

Query: 181 EAEFGQDVMNREYDENSVIPALDLGLQDENTENTKYFFQLPARLPLPEQSAAATGKEKVA 240
           EAEFGQD MNREYDENSVIPALDLGLQDENTENTKYFFQLPARLPLP+QS+ ATGKEKV 
Sbjct: 181 EAEFGQDAMNREYDENSVIPALDLGLQDENTENTKYFFQLPARLPLPKQSSTATGKEKVG 240

Query: 241 NLRSSNSTSSSDLGDLKKLSAGCMGKLLIYKSGAIKLRLGDILYDVSPGSNCSFLQHVVA 300
           N RSSNSTSSSDL DLKKLSAGCMGKLLIYKSGAIKLRLGDILYDVS GS+CSFLQHVVA
Sbjct: 241 NSRSSNSTSSSDLDDLKKLSAGCMGKLLIYKSGAIKLRLGDILYDVSSGSDCSFLQHVVA 300

Query: 301 INTEEGQCCDLGDIGKRVVVTPDISSLLNSVTNLR 335
           INTE+GQCCDLGDIGKRVVVTPDISSLLNSVTNLR
Sbjct: 301 INTEKGQCCDLGDIGKRVVVTPDISSLLNSVTNLR 334

[Close]

BLAST of PI0010269 vs. NCBI nr
Match: TYK16939.1 (DNA-directed RNA polymerase III subunit rpc4-like [Cucumis melo var. makuwa])

HSP 1 Score: 572.4 bits (1474), Expect = 2.6e-159
Identity = 297/319 (93.10%), Postives = 305/319 (95.61%), Query Frame = 0


Query: 1   MKNPDPTPPRRKVKFAPKSSQRKR-PPQPVQKTEDEDGEGYVAQTRYLLRRANENLGKRA 60
           MKN D +PPRRKVKFAPKSSQR+R PP PVQKTEDEDGEGYVAQTRYLLRRANENLGKRA
Sbjct: 1   MKNQDSSPPRRKVKFAPKSSQRRRPPPPPVQKTEDEDGEGYVAQTRYLLRRANENLGKRA 60

Query: 61  NKVEKNVSSVQVAFGPGAESTSSSIRTYGVPKVENGSRKNDIEPEVDEDEEFVLPMAMDV 120
           NKVEK  SSVQVAFGPGAESTSSSIRTYGVPKVENGSRKNDIEPEVDEDEEFVLP+AMDV
Sbjct: 61  NKVEKK-SSVQVAFGPGAESTSSSIRTYGVPKVENGSRKNDIEPEVDEDEEFVLPVAMDV 120

Query: 121 NEDGKVFDKKTKDGIAESSSSAVVTKTKRDYKEPWDYQNSYYPTTLPLRMPYSGDPERLD 180
           NEDGK FDKKTKDGIAESSSSA+VTKTKRDYKEPWDYQNSYYPTTLPLRMPYSGD ERLD
Sbjct: 121 NEDGKFFDKKTKDGIAESSSSAMVTKTKRDYKEPWDYQNSYYPTTLPLRMPYSGDHERLD 180

Query: 181 EAEFGQDVMNREYDENSVIPALDLGLQDENTENTKYFFQLPARLPLPEQSAAATGKEKVA 240
           EAEFGQD MNREYDENSVIPALDLGLQDENTENTKYFFQLPARLPLP+QS+ ATGKEKV 
Sbjct: 181 EAEFGQDAMNREYDENSVIPALDLGLQDENTENTKYFFQLPARLPLPKQSSTATGKEKVG 240

Query: 241 NLRSSNSTSSSDLGDLKKLSAGCMGKLLIYKSGAIKLRLGDILYDVSPGSNCSFLQHVVA 300
           N RSSNSTSSSDL DLKKLSAGCMGKLLIYKSGAIKLRLGDILYDVS GS+CSFLQHVVA
Sbjct: 241 NSRSSNSTSSSDLDDLKKLSAGCMGKLLIYKSGAIKLRLGDILYDVSSGSDCSFLQHVVA 300

Query: 301 INTEEGQCCDLGDIGKRVV 319
           INTE+GQCCDLGDIGKRVV
Sbjct: 301 INTEKGQCCDLGDIGKRVV 318

[Close]

BLAST of PI0010269 vs. NCBI nr
Match: XP_038879339.1 (DNA-directed RNA polymerase III subunit rpc4-like [Benincasa hispida])

HSP 1 Score: 557.8 bits (1436), Expect = 6.5e-155
Identity = 284/333 (85.29%), Postives = 308/333 (92.49%), Query Frame = 0


Query: 1   MKNPDPTPPRRKVKFAPKSSQRKRPPQPVQKTEDEDGEGYVAQTRYLLRRANENLGKRAN 60
           MKNPD +PPRRKVKFAPKS+ R+RPP PVQK EDEDG+GYVAQTRYLLRRA ENLGKR N
Sbjct: 1   MKNPDSSPPRRKVKFAPKSAPRRRPP-PVQKIEDEDGDGYVAQTRYLLRRATENLGKRGN 60

Query: 61  KVEKNVSSVQVAFGPGAESTSSSIRTYGVPKVENGSRKNDIEPEVDEDEEFVLPMAMDVN 120
           KV++  SSVQVAFGPGA STSSSIRTYGVPKVEN SRKNDIEP+VDEDEEF+LP+ MDV 
Sbjct: 61  KVQRK-SSVQVAFGPGAASTSSSIRTYGVPKVENSSRKNDIEPDVDEDEEFILPLPMDVE 120

Query: 121 EDGKVFDKKTKDGIAESSSSAVVTKTKRDYKEPWDYQNSYYPTTLPLRMPYSGDPERLDE 180
           E+GK+FDKKTKDGIAESSSSA+VTKTK+DYKEPWDY NS YPTTLP+RMPYSGDPE+LDE
Sbjct: 121 ENGKIFDKKTKDGIAESSSSAIVTKTKKDYKEPWDYHNSNYPTTLPIRMPYSGDPEQLDE 180

Query: 181 AEFGQDVMNREYDENSVIPALDLGLQDENTENTKYFFQLPARLPLPEQSAAATGKEKVAN 240
           AEFGQD  +REYDE+SVIPALDLGL DE TENTKYFFQLPARLPLP+QS+ ATGKEKV N
Sbjct: 181 AEFGQDATDREYDEDSVIPALDLGLLDEKTENTKYFFQLPARLPLPKQSSTATGKEKVGN 240

Query: 241 LRSSNSTSSSDLGDLKKLSAGCMGKLLIYKSGAIKLRLGDILYDVSPGSNCSFLQHVVAI 300
           LRSS S  SS+LGDLKKLSAGCMGKLLIYKSGAIKLRLGD LYDVS GS+CSFLQHVVAI
Sbjct: 241 LRSSKSMGSSELGDLKKLSAGCMGKLLIYKSGAIKLRLGDTLYDVSSGSDCSFLQHVVAI 300

Query: 301 NTEEGQCCDLGDIGKRVVVTPDISSLLNSVTNL 334
           NT+EGQCCDLGDIGKRV+VTPDISSLLNS+TNL
Sbjct: 301 NTKEGQCCDLGDIGKRVIVTPDISSLLNSMTNL 331

[Close]

BLAST of PI0010269 vs. TAIR 10
Match: AT4G25180.1 (RNA polymerase III RPC4 )

HSP 1 Score: 184.5 bits (467), Expect = 1.4e-46
Identity = 126/328 (38.41%), Postives = 177/328 (53.96%), Query Frame = 0


Query: 10  RRKVKFAPKSSQRKRPPQPVQKTEDEDGEGYVAQTRYLLRRANENLGKRANKVEKNVSSV 69
           +R+ +  P    R+ P  P   TE E+ E  +  +R   RR    +G+R  K E   SS 
Sbjct: 9   KRRFQPNPPRPSRRLPIAPTSNTEAEEDEENIKASRQFDRRI---VGRRP-KTETKASSP 68

Query: 70  QVAFGPGAESTSSSIRTYGVPKVENGSRKNDIEPEVDEDEEFVLPMAMDV---NEDGKVF 129
           +VAF P    +  +IR++GVPK E+    +D+ P        +LP    V    EDG+  
Sbjct: 69  EVAFQPSL--SPLAIRSFGVPK-EDDKPNSDVNP---SSPASILPAVSSVTAAQEDGEEV 128

Query: 130 DKKTKDGIAESSSSAVVTKTKRDYKEPWDYQNSYYPTTLPLRMPYSGDPERLDEAEFGQD 189
                           VT+T  DY EPWDY+NSYYPT LPLR P SGD E LD+ EFG+ 
Sbjct: 129 HN-------------FVTRTGDDYVEPWDYRNSYYPTVLPLRKPNSGDIELLDQEEFGEV 188

Query: 190 VMNREYDENSVIPALDLGLQD-ENTENTKYFFQLPARLPLPEQSAAATGKEKVANLRSSN 249
             NR+YDEN++  A +LGL   ++++   + F++P  LP+ +Q+  AT K      RS  
Sbjct: 189 AKNRDYDENTINSAEELGLTSVQHSKKQMFIFKIPDCLPVVKQTTGATTK------RSVR 248

Query: 250 STSSSDLGDLKKLSAGCMGKLLIYKSGAIKLRLGDILYDVSPGSNCSFLQHVVAINTEEG 309
             SS      + L  G MGK+L+YKSGA+KL++GD L+DVSPG        VVAI+ +  
Sbjct: 249 EYSSGISNPFEGLPEGFMGKMLVYKSGAVKLKVGDALFDVSPGPGTKIPNDVVAIDIKGR 307

Query: 310 QCCDLGDIGKRVVVTPDISSLLNSVTNL 334
            C  +G   K V VTPD+ SLLN  +++
Sbjct: 309 NCSRIGSSAKFVTVTPDVESLLNPASDM 307

[Close]

BLAST of PI0010269 vs. TAIR 10
Match: AT5G09380.1 (RNA polymerase III RPC4 )

HSP 1 Score: 170.2 bits (430), Expect = 2.7e-42
Identity = 124/326 (38.04%), Postives = 170/326 (52.15%), Query Frame = 0


Query: 8   PPRRKVKFAPKSSQRKRPPQPVQKTEDEDGEGYVAQTRYLLRRANENLGKRANKVEKNVS 67
           PP RK+KFAPK+   KR P+P  K E  +     AQ   LLRR NE    R  K +K V 
Sbjct: 5   PPVRKMKFAPKAPP-KRVPKPEVKPEVVEDNSNSAQASELLRRVNER-SLRKPKADKKVP 64

Query: 68  SVQVAFGPGAESTSSSIRTYGVPKVENGSRKNDIEPEVDEDEEFVLPMAMDVNEDGKVFD 127
           + QVA+  G               V N +R N                        K  +
Sbjct: 65  ASQVAWLGG---------------VVNSTRSN------------------------KYLN 124

Query: 128 KKTKDGIAESSSSAVVTKTKRDYKEPWDYQNSYYPTTLPLRMPYSGDPERLDEAEFGQDV 187
           +   +G   S+S+  +     +YKEPWDY  SYYP TLP+R PY+GDPE LD  EF Q  
Sbjct: 125 R--SNGAYGSTSTQEI-----EYKEPWDYY-SYYPITLPMRRPYAGDPEVLDVEEFMQ-- 184

Query: 188 MNREYDENSVIPALDLGLQDENTENTKYFFQLPARLPLPEQSAAATGKEKVANLRSSNST 247
               + E+S+  A +LGL +++ E   +F +LP+ +PL     A+T  E +    +    
Sbjct: 185 -AGGHHEDSLNTAANLGLMEDSGEQKMFFMRLPS-VPL-----ASTPTENLETRPNIKGP 244

Query: 248 SSSDLGDLKKLSAGCMGKLLIYKSGAIKLRLGDILYDVSPGSNCSFLQHVVAINTEEGQC 307
                 DLK L  G MGKLL+YKSGA+K++LG++LYDVSPG    F Q V+ +NTE+  C
Sbjct: 245 VEKKTVDLKALPEGYMGKLLVYKSGAVKMKLGEVLYDVSPGLKSEFAQDVMVVNTEQKNC 272

Query: 308 CDLGDIGKRVVVTPDISSLLNSVTNL 334
           C +GD+ K  V+TPDI S+L  + N+
Sbjct: 305 CLVGDVYKHAVLTPDIDSILKDIENI 272

The following BLAST results are available for this feature:

BLAST of PI0010269 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q91WD1	2.5e-08	41.56	DNA-directed RNA polymerase III subunit RPC4 OS=Mus musculus OX=10090 GN=Polr3d ...	[more]
P05423	4.3e-08	41.56	DNA-directed RNA polymerase III subunit RPC4 OS=Homo sapiens OX=9606 GN=POLR3D P...	[more]
Q5E9Z7	2.1e-07	37.11	DNA-directed RNA polymerase III subunit RPC4 OS=Bos taurus OX=9913 GN=POLR3D PE=...	[more]
P25441	6.2e-07	30.25	DNA-directed RNA polymerase III subunit RPC4 OS=Saccharomyces cerevisiae (strain...	[more]
Q8T1V7	7.6e-05	35.06	DNA-directed RNA polymerase III subunit rpc4 OS=Dictyostelium discoideum OX=4468...	[more]

BLAST of PI0010269 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TN83	3.8e-169	93.43	DNA-directed RNA polymerase III subunit rpc4-like OS=Cucumis melo var. makuwa OX...	[more]
A0A0A0KZ61	1.9e-168	93.43	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G022870 PE=4 SV=1	[more]
A0A1S3BYJ9	1.9e-168	93.43	DNA-directed RNA polymerase III subunit rpc4-like OS=Cucumis melo OX=3656 GN=LOC...	[more]
A0A5D3D2X2	1.2e-159	93.10	Ribosomal protein L15 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13...	[more]
A0A6J1E8A8	5.1e-129	74.63	DNA-directed RNA polymerase III subunit rpc4-like OS=Cucurbita moschata OX=3662 ...	[more]

BLAST of PI0010269 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0044650.1	7.9e-169	93.43	DNA-directed RNA polymerase III subunit rpc4-like [Cucumis melo var. makuwa]	[more]
XP_004146914.1	3.9e-168	93.43	DNA-directed RNA polymerase III subunit rpc4 [Cucumis sativus] >KGN53151.1 hypot...	[more]
XP_008453902.1	3.9e-168	93.43	PREDICTED: DNA-directed RNA polymerase III subunit rpc4-like [Cucumis melo]	[more]
TYK16939.1	2.6e-159	93.10	DNA-directed RNA polymerase III subunit rpc4-like [Cucumis melo var. makuwa]	[more]
XP_038879339.1	6.5e-155	85.29	DNA-directed RNA polymerase III subunit rpc4-like [Benincasa hispida]	[more]

BLAST of PI0010269 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G25180.1	1.4e-46	38.41	RNA polymerase III RPC4	[more]
AT5G09380.1	2.7e-42	38.04	RNA polymerase III RPC4	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007811	DNA-directed RNA polymerase III subunit RPC4	PFAM	PF05132	RNA_pol_Rpc4	coord: 217..323 e-value: 1.4E-25 score: 90.4
IPR007811	DNA-directed RNA polymerase III subunit RPC4	PANTHER	PTHR13408	DNA-DIRECTED RNA POLYMERASE III	coord: 1..333
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 238..252
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 229..252
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 74..89
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..41
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 74..99
None	No IPR available	PANTHER	PTHR13408:SF6	DNA-DIRECTED RNA POLYMERASE III SUBUNIT RPC4-LIKE ISOFORM X1	coord: 1..333

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0010269.1	PI0010269.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006383	transcription by RNA polymerase III
biological_process	GO:0006412	translation
cellular_component	GO:0005829	cytosol
cellular_component	GO:0005840	ribosome
cellular_component	GO:0005666	RNA polymerase III complex
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003899	DNA-directed 5'-3' RNA polymerase activity
molecular_function	GO:0003729	mRNA binding
molecular_function	GO:0003735	structural constituent of ribosome