PI0010213 (gene) Melon (PI 482460) v1

Overview


Name	PI0010213
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Drebrin-like
Location	chr10: 4238021 .. 4239181 (-)
RNA-Seq Expression	PI0010213
Synteny	PI0010213

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCTACACGACATGACAGAACGATTTCCTTGGAGAAGGCAATGTTGCTCTATTGCATCTTGGAGGAAATTCCAATCAATGTGGGTGAAATAATATGCGAACAAATTCACAAGTGGATTTGTAGACCACGAGGAGGCAAGTCTTTCCCTGCGTTGATTGAGAAGCTTTGCTTGGAGGCCATTCCATTATTCGACCACTATCCCAAAATGAAAGTTACGGAAGGCCTCTGCACCATGACATGTTTGTGGTGCATGATTAACCTCCATGTGAATAAAGAAGCAAAGAAGCAAAGTAAATCTTCCAACCCGGGCATAACTATCCAAGATGTGGAGGAAGATGAAGATGAGCCCCAATCACCGCTAAAGAGAAATAGCAAGGATGAGGCGTCTGGGTCTAAAACGCAAGGAAAAAAGCTCAGAATCAATGACTCTAACCCTTTGCCTCTAGCAATCTTGCATCCAATAGTGACCCTTTCTCTTTCTTCAGCCAACTCATGTATCCAACTCTCTTCTGAAAGGTCCAAAACGCCTCCTCCTCTCAAAGAATCCAAAGTACCTTCTCTCGTAAAATCCAAAACGCCTCCACCATAACTTCAATCACAATCTCCACTATCTCCACTTCCCAAAATATCCAAATCTCCCACAAAGTCCAAATCGCCATGCCCTCCCATCATAATCCCAACCTCCCCTTCTCCGCGGTAAGAGGACGATTCTCAGACTCTTGACGTCTCATTACCCTCACCTTCTTCCATTTTCACGTCTGATCTTAACGACCCAAGACTTGAACAAAAAGAGCTTGAAGAAGACTTATTTCACAACCCTATGACTGACTTCCCCACTGATCCTACCACAAGCCCAAAAATAGCCATTTTTCCATAAACGTCTAAGGATCAAAACGTTGCAGCCCTAGTTTCTGTTAGATCATCAGTCGAGGGAAATAAGGAAACTGTTGATGACCCATTCCCTTACGAACAAGCCAACACGGAGGTAGCTGGTGAGACAAGTAGTCCTCCCTGTCTGCCCAAACTAGCAACCATCTATCAGCGGCGGAAAGAAGGAAATGATGAAGAGTATTGCCAGTTTCTGGGGGAAACTTTTGGTAAACCTATGATGGATGCGTTTGATGATGTCTTCGCATCTCAGGTTGACCTTCAAGAGTGA

mRNA sequence

ATGCCTACACGACATGACAGAACGATTTCCTTGGAGAAGGCAATGTTGCTCTATTGCATCTTGGAGGAAATTCCAATCAATGTGGGTGAAATAATATGCGAACAAATTCACAAGTGGATTTGTAGACCACGAGGAGGCAAGTCTTTCCCTGCGTTGATTGAGAAGCTTTGCTTGGAGGCCATTCCATTATTCGACCACTATCCCAAAATGAAAGTTACGGAAGGCCTCTGCACCATGACATGTTTGTGGTGCATGATTAACCTCCATGTGAATAAAGAAGCAAAGAAGCAAAGTAAATCTTCCAACCCGGGCATAACTATCCAAGATGTGGAGGAAGATGAAGATGAGCCCCAATCACCGCTAAAGAGAAATAGCAAGGATGAGGCGTCTGGGTCTAAAACGCAAGGAAAAAAGCTCAGAATCAATGACTCTAACCCTTTGCCTCTAGCAATCTTGCATCCAATAGTGACCCTTTCTCTTTCTTCAGCCAACTCATGTATCCAACTCTCTTCTGAAAGGTCCAAAACGCCTCCTCCTCTCAAAGAATCCAAAGTACCTTCTCTCGATCAAAACGTTGCAGCCCTAGTTTCTGTTAGATCATCAGTCGAGGGAAATAAGGAAACTGTTGATGACCCATTCCCTTACGAACAAGCCAACACGGAGGTAGCTGGTGAGACAAGTAGTCCTCCCTGTCTGCCCAAACTAGCAACCATCTATCAGCGGCGGAAAGAAGGAAATGATGAAGAGTATTGCCAGTTTCTGGGGGAAACTTTTGGTAAACCTATGATGGATGCGTTTGATGATGTCTTCGCATCTCAGGTTGACCTTCAAGAGTGA

Coding sequence (CDS)

ATGCCTACACGACATGACAGAACGATTTCCTTGGAGAAGGCAATGTTGCTCTATTGCATCTTGGAGGAAATTCCAATCAATGTGGGTGAAATAATATGCGAACAAATTCACAAGTGGATTTGTAGACCACGAGGAGGCAAGTCTTTCCCTGCGTTGATTGAGAAGCTTTGCTTGGAGGCCATTCCATTATTCGACCACTATCCCAAAATGAAAGTTACGGAAGGCCTCTGCACCATGACATGTTTGTGGTGCATGATTAACCTCCATGTGAATAAAGAAGCAAAGAAGCAAAGTAAATCTTCCAACCCGGGCATAACTATCCAAGATGTGGAGGAAGATGAAGATGAGCCCCAATCACCGCTAAAGAGAAATAGCAAGGATGAGGCGTCTGGGTCTAAAACGCAAGGAAAAAAGCTCAGAATCAATGACTCTAACCCTTTGCCTCTAGCAATCTTGCATCCAATAGTGACCCTTTCTCTTTCTTCAGCCAACTCATGTATCCAACTCTCTTCTGAAAGGTCCAAAACGCCTCCTCCTCTCAAAGAATCCAAAGTACCTTCTCTCGATCAAAACGTTGCAGCCCTAGTTTCTGTTAGATCATCAGTCGAGGGAAATAAGGAAACTGTTGATGACCCATTCCCTTACGAACAAGCCAACACGGAGGTAGCTGGTGAGACAAGTAGTCCTCCCTGTCTGCCCAAACTAGCAACCATCTATCAGCGGCGGAAAGAAGGAAATGATGAAGAGTATTGCCAGTTTCTGGGGGAAACTTTTGGTAAACCTATGATGGATGCGTTTGATGATGTCTTCGCATCTCAGGTTGACCTTCAAGAGTGA

Protein sequence

MPTRHDRTISLEKAMLLYCILEEIPINVGEIICEQIHKWICRPRGGKSFPALIEKLCLEAIPLFDHYPKMKVTEGLCTMTCLWCMINLHVNKEAKKQSKSSNPGITIQDVEEDEDEPQSPLKRNSKDEASGSKTQGKKLRINDSNPLPLAILHPIVTLSLSSANSCIQLSSERSKTPPPLKESKVPSLDQNVAALVSVRSSVEGNKETVDDPFPYEQANTEVAGETSSPPCLPKLATIYQRRKEGNDEEYCQFLGETFGKPMMDAFDDVFASQVDLQE

Homology

[Close]

BLAST of PI0010213 vs. ExPASy TrEMBL
Match: A0A5A7SRQ1 (Drebrin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold156G00660 PE=4 SV=1)

HSP 1 Score: 119.8 bits (299), Expect = 1.8e-23
Identity = 59/146 (40.41%), Postives = 89/146 (60.96%), Query Frame = 0


Query: 1   MPTRHDRTISLEKAMLLYCILEEIPINVGEIICEQIHKWICRPRGGKSFPALIEKLCLEA 60
           MPTRHD TIS++K +L+YCI+EE+P+NVGEIICE I  W+  P+G + FP LIEKLCL+A
Sbjct: 1   MPTRHDNTISMDKIVLIYCIMEELPVNVGEIICEHIFAWVKHPQGSRPFPHLIEKLCLKA 60

Query: 61  IPLFDHYPKMKVTEGLCTMTCLWCMINLHVNKEAKKQSKSSNPGITIQDVEEDEDEPQSP 120
            P  +  P+++V + + T + L+C I +H NK   K  K+ +   T   ++E+  +P + 
Sbjct: 61  CPSLEKLPQVEVKDRVYTASTLYCFIAIHKNKSRLKHLKTKHEARTSIPLQEEILQPLAS 120

Query: 121 LKRNSKDEASGSKTQGKKLRINDSNP 147
              N     S   +  K    + S+P
Sbjct: 121 TLTNKTKPLSPEGSNRKVFHESFSDP 146

[Close]

BLAST of PI0010213 vs. ExPASy TrEMBL
Match: A0A5D3C0C3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold76994G00060 PE=4 SV=1)

HSP 1 Score: 102.1 bits (253), Expect = 3.9e-18
Identity = 65/160 (40.62%), Postives = 90/160 (56.25%), Query Frame = 0


Query: 1   MPTRHDRTISLEKAMLLYCILEEIPINVGEIICEQIHKWICRPRGGKSFPALIEKLCLEA 60
           MPT  D  IS++K +LLYC +EEI +NVG+IICE I  W+  P   +  P LIE++ L+A
Sbjct: 1   MPTHQDNMISMDKTILLYCNIEEILVNVGKIICEHIQAWVRHPHDARPLPNLIEQIFLKA 60

Query: 61  IPLFDHYPKMKVTEGLCTMTCLWCMINLHVNKEAKKQSKS-------SNPGITIQDVEED 120
                +  K  V + +CT+T +  MINL+ NK   K  K+        +  + I + EE 
Sbjct: 61  CFALKNLLKTMVKDEICTITSVSHMINLNKNKAEDKCLKTKEIEKVKEDDKMEIDEEEER 120

Query: 121 EDEPQSPLKRNSKDE--ASGSKTQGKKLRINDSNP-LPLA 151
           EDE  SPL R  K E  A GS+ + +K +  DS   LPLA
Sbjct: 121 EDETLSPLIRKMKGENKAFGSRKRKRKPKAKDSRDLLPLA 160

[Close]

BLAST of PI0010213 vs. ExPASy TrEMBL
Match: A0A5A7UWQ4 (Drebrin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold22G00550 PE=4 SV=1)

HSP 1 Score: 100.9 bits (250), Expect = 8.8e-18
Identity = 58/139 (41.73%), Postives = 86/139 (61.87%), Query Frame = 0


Query: 1   MPTRHDRTISLEKAMLLYCILEEIPINVGEIICEQIHKWICRPRGGKSFPALIEKLCLEA 60
           MPT HD TIS+E+ ML+Y I+EEI +NVGEII + I   +  PRG + FP LI+KLCL+A
Sbjct: 1   MPTSHDSTISMERIMLVYYIMEEIHVNVGEIISKHIIVGVKHPRGTRPFPQLIKKLCLKA 60

Query: 61  IPLFDHYPKMKVTEGLCTMTCLWCMINLHVNK------EAKKQSKSSNPGITIQDVEEDE 120
               D+ P++ V +G+ +   L+ +I ++ NK      +AK+  KS    +  +D EE++
Sbjct: 61  CSALDNLPQIGVKDGIWSSATLYRIIAINRNKAKLKYLKAKQDGKSEVKEVDDKD-EEEK 120

Query: 121 DEPQSPLKRNSKDEASGSK 134
           +E   PLKR  + E   SK
Sbjct: 121 EEDNVPLKRKRQSEDESSK 138

[Close]

BLAST of PI0010213 vs. ExPASy TrEMBL
Match: A0A5A7UUR1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold279G00010 PE=4 SV=1)

HSP 1 Score: 99.8 bits (247), Expect = 2.0e-17
Identity = 66/181 (36.46%), Postives = 98/181 (54.14%), Query Frame = 0


Query: 1   MPTRHDRTISLEKAMLLYCILEEIPINVGEIICEQIHKWICRPRGGKSFPALIEKLCLEA 60
           MPTRHD TI LE AM++YCI +++ +N+G II   I   +  P+    FP  I+ LCL+A
Sbjct: 1   MPTRHDNTIPLEYAMMIYCIKKKMVVNLGAIIRNSILSLMEAPKDIMPFPFTIKALCLKA 60

Query: 61  IPLFDHYPKMKVTEGLCTMTCLWCMINLHVNKEAKKQSKSSNPGITIQDVEEDEDEPQSP 120
           +P    + +  +++G+C    L   I LH NKE ++  K+ N    ++  EE+   P  P
Sbjct: 61  VPELSTFLQAPISDGVCFQATLNQTIMLHQNKEEERCIKTLN---KVKGEEEEASSPPPP 120

Query: 121 LKR-NSKDEASGSKTQGKKLRI-NDSNPLPLAILHPIVTLSLSSANSCIQLSSERSKTPP 180
           LKR  S D     + +GK++   +D NP PLAIL P+   S  + +      S   KT P
Sbjct: 121 LKRKKSHDSVFSLQKKGKEMEARHDINPKPLAIL-PLTLPSPPAKSKSFDPPSPHLKTQP 177

[Close]

BLAST of PI0010213 vs. ExPASy TrEMBL
Match: A0A5D3DVQ6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1142G00370 PE=4 SV=1)

HSP 1 Score: 98.6 bits (244), Expect = 4.4e-17
Identity = 43/78 (55.13%), Postives = 56/78 (71.79%), Query Frame = 0


Query: 1   MPTRHDRTISLEKAMLLYCILEEIPINVGEIICEQIHKWICRPRGGKSFPALIEKLCLEA 60
           MPTRHD TIS E+ MLLYCI+EEIP++V EIIC+ I  W+  PRG K FP LIE+LCL +
Sbjct: 211 MPTRHDNTISFERIMLLYCIMEEIPVDVDEIICDHIKAWVQHPRGAKPFPHLIERLCLRS 270

Query: 61  IPLFDHYPKMK-VTEGLC 78
               +  P++  V +G+C
Sbjct: 271 CSELEQSPQIACVQDGMC 288

[Close]

BLAST of PI0010213 vs. NCBI nr
Match: KAA0032726.1 (drebrin-like [Cucumis melo var. makuwa] >TYJ98758.1 drebrin-like [Cucumis melo var. makuwa])

HSP 1 Score: 119.8 bits (299), Expect = 3.8e-23
Identity = 59/146 (40.41%), Postives = 89/146 (60.96%), Query Frame = 0


Query: 1   MPTRHDRTISLEKAMLLYCILEEIPINVGEIICEQIHKWICRPRGGKSFPALIEKLCLEA 60
           MPTRHD TIS++K +L+YCI+EE+P+NVGEIICE I  W+  P+G + FP LIEKLCL+A
Sbjct: 1   MPTRHDNTISMDKIVLIYCIMEELPVNVGEIICEHIFAWVKHPQGSRPFPHLIEKLCLKA 60

Query: 61  IPLFDHYPKMKVTEGLCTMTCLWCMINLHVNKEAKKQSKSSNPGITIQDVEEDEDEPQSP 120
            P  +  P+++V + + T + L+C I +H NK   K  K+ +   T   ++E+  +P + 
Sbjct: 61  CPSLEKLPQVEVKDRVYTASTLYCFIAIHKNKSRLKHLKTKHEARTSIPLQEEILQPLAS 120

Query: 121 LKRNSKDEASGSKTQGKKLRINDSNP 147
              N     S   +  K    + S+P
Sbjct: 121 TLTNKTKPLSPEGSNRKVFHESFSDP 146

[Close]

BLAST of PI0010213 vs. NCBI nr
Match: KAA0058409.1 (hypothetical protein E6C27_scaffold409G001210 [Cucumis melo var. makuwa] >TYK04704.1 hypothetical protein E5676_scaffold76994G00060 [Cucumis melo var. makuwa])

HSP 1 Score: 102.1 bits (253), Expect = 8.2e-18
Identity = 65/160 (40.62%), Postives = 90/160 (56.25%), Query Frame = 0


Query: 1   MPTRHDRTISLEKAMLLYCILEEIPINVGEIICEQIHKWICRPRGGKSFPALIEKLCLEA 60
           MPT  D  IS++K +LLYC +EEI +NVG+IICE I  W+  P   +  P LIE++ L+A
Sbjct: 1   MPTHQDNMISMDKTILLYCNIEEILVNVGKIICEHIQAWVRHPHDARPLPNLIEQIFLKA 60

Query: 61  IPLFDHYPKMKVTEGLCTMTCLWCMINLHVNKEAKKQSKS-------SNPGITIQDVEED 120
                +  K  V + +CT+T +  MINL+ NK   K  K+        +  + I + EE 
Sbjct: 61  CFALKNLLKTMVKDEICTITSVSHMINLNKNKAEDKCLKTKEIEKVKEDDKMEIDEEEER 120

Query: 121 EDEPQSPLKRNSKDE--ASGSKTQGKKLRINDSNP-LPLA 151
           EDE  SPL R  K E  A GS+ + +K +  DS   LPLA
Sbjct: 121 EDETLSPLIRKMKGENKAFGSRKRKRKPKAKDSRDLLPLA 160

[Close]

BLAST of PI0010213 vs. NCBI nr
Match: KAA0060282.1 (drebrin-like [Cucumis melo var. makuwa])

HSP 1 Score: 100.9 bits (250), Expect = 1.8e-17
Identity = 58/139 (41.73%), Postives = 86/139 (61.87%), Query Frame = 0


Query: 1   MPTRHDRTISLEKAMLLYCILEEIPINVGEIICEQIHKWICRPRGGKSFPALIEKLCLEA 60
           MPT HD TIS+E+ ML+Y I+EEI +NVGEII + I   +  PRG + FP LI+KLCL+A
Sbjct: 1   MPTSHDSTISMERIMLVYYIMEEIHVNVGEIISKHIIVGVKHPRGTRPFPQLIKKLCLKA 60

Query: 61  IPLFDHYPKMKVTEGLCTMTCLWCMINLHVNK------EAKKQSKSSNPGITIQDVEEDE 120
               D+ P++ V +G+ +   L+ +I ++ NK      +AK+  KS    +  +D EE++
Sbjct: 61  CSALDNLPQIGVKDGIWSSATLYRIIAINRNKAKLKYLKAKQDGKSEVKEVDDKD-EEEK 120

Query: 121 DEPQSPLKRNSKDEASGSK 134
           +E   PLKR  + E   SK
Sbjct: 121 EEDNVPLKRKRQSEDESSK 138

[Close]

BLAST of PI0010213 vs. NCBI nr
Match: KAA0057279.1 (hypothetical protein E6C27_scaffold280G001200 [Cucumis melo var. makuwa] >TYK27636.1 hypothetical protein E5676_scaffold279G00010 [Cucumis melo var. makuwa])

HSP 1 Score: 99.8 bits (247), Expect = 4.0e-17
Identity = 66/181 (36.46%), Postives = 98/181 (54.14%), Query Frame = 0


Query: 1   MPTRHDRTISLEKAMLLYCILEEIPINVGEIICEQIHKWICRPRGGKSFPALIEKLCLEA 60
           MPTRHD TI LE AM++YCI +++ +N+G II   I   +  P+    FP  I+ LCL+A
Sbjct: 1   MPTRHDNTIPLEYAMMIYCIKKKMVVNLGAIIRNSILSLMEAPKDIMPFPFTIKALCLKA 60

Query: 61  IPLFDHYPKMKVTEGLCTMTCLWCMINLHVNKEAKKQSKSSNPGITIQDVEEDEDEPQSP 120
           +P    + +  +++G+C    L   I LH NKE ++  K+ N    ++  EE+   P  P
Sbjct: 61  VPELSTFLQAPISDGVCFQATLNQTIMLHQNKEEERCIKTLN---KVKGEEEEASSPPPP 120

Query: 121 LKR-NSKDEASGSKTQGKKLRI-NDSNPLPLAILHPIVTLSLSSANSCIQLSSERSKTPP 180
           LKR  S D     + +GK++   +D NP PLAIL P+   S  + +      S   KT P
Sbjct: 121 LKRKKSHDSVFSLQKKGKEMEARHDINPKPLAIL-PLTLPSPPAKSKSFDPPSPHLKTQP 177

[Close]

BLAST of PI0010213 vs. NCBI nr
Match: KAA0066376.1 (hypothetical protein E6C27_scaffold21G004490 [Cucumis melo var. makuwa])

HSP 1 Score: 98.6 bits (244), Expect = 9.0e-17
Identity = 44/104 (42.31%), Postives = 68/104 (65.38%), Query Frame = 0


Query: 1   MPTRHDRTISLEKAMLLYCILEEIPINVGEIICEQIHKWICRPRGGKSFPALIEKLCLEA 60
           M TR +  +S+++ ML+YCI+EE+ +N+GEIICE I + +  P G +SFP LIEKLCL+ 
Sbjct: 98  MRTRQESIVSMDRMMLIYCIMEELQVNLGEIICEHILECVKHPYGARSFPHLIEKLCLKT 157

Query: 61  IPLFDHYPKMKVTEGLCTMTCLWCMINLHVNKEAKKQSKSSNPG 105
               +  P+++V +G+CT   L  +I +H NK   K+ K+   G
Sbjct: 158 CLALEKLPQVEVKDGMCTTITLPRIIAIHKNKARLKRLKTKKEG 201

The following BLAST results are available for this feature:

BLAST of PI0010213 vs.


Match Name	E-value	Identity	Description

BLAST of PI0010213 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7SRQ1	1.8e-23	40.41	Drebrin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold156G00660 P...	[more]
A0A5D3C0C3	3.9e-18	40.63	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5A7UWQ4	8.8e-18	41.73	Drebrin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold22G00550 PE...	[more]
A0A5A7UUR1	2.0e-17	36.46	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5D3DVQ6	4.4e-17	55.13	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]

BLAST of PI0010213 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0032726.1	3.8e-23	40.41	drebrin-like [Cucumis melo var. makuwa] >TYJ98758.1 drebrin-like [Cucumis melo v...	[more]
KAA0058409.1	8.2e-18	40.63	hypothetical protein E6C27_scaffold409G001210 [Cucumis melo var. makuwa] >TYK047...	[more]
KAA0060282.1	1.8e-17	41.73	drebrin-like [Cucumis melo var. makuwa]	[more]
KAA0057279.1	4.0e-17	36.46	hypothetical protein E6C27_scaffold280G001200 [Cucumis melo var. makuwa] >TYK276...	[more]
KAA0066376.1	9.0e-17	42.31	hypothetical protein E6C27_scaffold21G004490 [Cucumis melo var. makuwa]	[more]

BLAST of PI0010213 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 116..134
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 95..141

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0010213.1	PI0010213.1	mRNA