PI0010160 (gene) Melon (PI 482460) v1

Overview
NamePI0010160
Typegene
OrganismCucumis metuliferus (Melon (PI 482460) v1)
DescriptionUnknown protein
Locationchr07: 16684027 .. 16684421 (+)
RNA-Seq ExpressionPI0010160
SyntenyPI0010160
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTGAGTTTTGGTAGGATTTGGGCCATTTTTGTTGATTATCTATTTGATGCACCCGCAATAGATCTGATGCGCTTAAATTATTGGGCCTTAACTTTCCAAGTTTCAAGTCGGTAAAGCTCAGTTTCGATTTTTGGGTTCTGAGCAGTTTAGCAGCTCTGATATTGCCCCAATTTCGCCTGGGACTCATGTAGGCCTTCAATTTGGTCTTTCTCGACTATCTTCGAGCATGAAGGGGTGGAGGCTTTTCTCTTCACGATCATCAACTCTCCATCTCCGACCCTATCTCCATCTTCACAGTTTTGCCATTGTCCAATTTTCCACTTGGGTTCCTTCTCACGATTCAAGTTAGTAGTCTCACGAACGGAAGTTCCTTTGAGTTGTATCAGCTCTAG

mRNA sequence

ATGGTGAGTTTTGGTAGGATTTGGGCCATTTTTGTTGATTATCTATTTGATGCACCCGCAATAGATCTGATGCGCTTAAATTATTGGGCCTTAACTTTCCAAGTTTCAACTCTGATATTGCCCCAATTTCGCCTGGGACTCATGGGTGGAGGCTTTTCTCTTCACGATCATCAACTCTCCATCTCCGACCCTATCTCCATCTTCACAGTTTTGCCATTGTCCAATTTTCCACTTGGGTTCCTTCTCACGATTCAAGTTAGTAGTCTCACGAACGGAAGTTCCTTTGAGTTGTATCAGCTCTAG

Coding sequence (CDS)

ATGGTGAGTTTTGGTAGGATTTGGGCCATTTTTGTTGATTATCTATTTGATGCACCCGCAATAGATCTGATGCGCTTAAATTATTGGGCCTTAACTTTCCAAGTTTCAACTCTGATATTGCCCCAATTTCGCCTGGGACTCATGGGTGGAGGCTTTTCTCTTCACGATCATCAACTCTCCATCTCCGACCCTATCTCCATCTTCACAGTTTTGCCATTGTCCAATTTTCCACTTGGGTTCCTTCTCACGATTCAAGTTAGTAGTCTCACGAACGGAAGTTCCTTTGAGTTGTATCAGCTCTAG

Protein sequence

MVSFGRIWAIFVDYLFDAPAIDLMRLNYWALTFQVSTLILPQFRLGLMGGGFSLHDHQLSISDPISIFTVLPLSNFPLGFLLTIQVSSLTNGSSFELYQL
Homology
[Close]
BLAST of PI0010160 vs. ExPASy TrEMBL
Match: A0A0A0KZF8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G124890 PE=4 SV=1)

HSP 1 Score: 115.5 bits (288), Expect = 1.2e-22
Identity = 70/123 (56.91%), Postives = 80/123 (65.04%), Query Frame = 0 

Query: 1   MVSFGRIWAIFVDYLFDAPAIDLMRLNYWALTF--------QVSTL----ILPQFRLGLM 60
           MVSFGRIWAIFVDYLFDAP  DL  LNYWA  F        ++S+     ILP+  LGL 
Sbjct: 1   MVSFGRIWAIFVDYLFDAPTPDLRCLNYWAFNFPNFESVKLKLSSSDIAPILPRTHLGLE 60

Query: 61  GGGF-----------SLHDHQLSISDPISIFTVLPLSNFPLGFLLTIQVSSLTNGSSFEL 101
              F           S+HDHQL I++PISIFTVLPLS+FPL FLL  QVSSL N +S E+
Sbjct: 61  IRSFPTIFEHGGLEASVHDHQLLITNPISIFTVLPLSSFPLEFLLRFQVSSLANQNSSEV 120

[Close]
BLAST of PI0010160 vs. NCBI nr
Match: KGN53767.1 (hypothetical protein Csa_014492 [Cucumis sativus])

HSP 1 Score: 115.5 bits (288), Expect = 2.6e-22
Identity = 70/123 (56.91%), Postives = 80/123 (65.04%), Query Frame = 0 

Query: 1   MVSFGRIWAIFVDYLFDAPAIDLMRLNYWALTF--------QVSTL----ILPQFRLGLM 60
           MVSFGRIWAIFVDYLFDAP  DL  LNYWA  F        ++S+     ILP+  LGL 
Sbjct: 1   MVSFGRIWAIFVDYLFDAPTPDLRCLNYWAFNFPNFESVKLKLSSSDIAPILPRTHLGLE 60

Query: 61  GGGF-----------SLHDHQLSISDPISIFTVLPLSNFPLGFLLTIQVSSLTNGSSFEL 101
              F           S+HDHQL I++PISIFTVLPLS+FPL FLL  QVSSL N +S E+
Sbjct: 61  IRSFPTIFEHGGLEASVHDHQLLITNPISIFTVLPLSSFPLEFLLRFQVSSLANQNSSEV 120

The following BLAST results are available for this feature:
BLAST of PI0010160 vs.
Match NameE-valueIdentityDescription
BLAST of PI0010160 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KZF81.2e-2256.91Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G124890 PE=4 SV=1[more]
BLAST of PI0010160 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN53767.12.6e-2256.91hypothetical protein Csa_014492 [Cucumis sativus][more]
BLAST of PI0010160 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
PI0010160.1PI0010160.1mRNA