PI0010122 (gene) Melon (PI 482460) v1

Overview


Name	PI0010122
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Unknown protein
Location	chr09: 8666985 .. 8668092 (+)
RNA-Seq Expression	PI0010122
Synteny	PI0010122

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGGACTGTAATTTTTCATGGCCTTCCTTCCTCTGCCATTGATGCCTTTGTTATTTCAATTGTCTTTGCTTTTTCAGGTGCTTTGAGTGCTCTTTTGGTTGCTCAAAGACACAACTTAGCAGGATTTTGTGCCTTGTATTCTCTGGTTTCCATGGCTTCTGCTCTGCTTCTACTGATTTGGGGACGGTATCATACACTCATTCTTGGCAAAGCTTATTAGTAGAGAGAGCTTTATGAGATTAGAATGTGTTTGGTTCTTGTTTTTGTTAAACCTCTTGTGAGCTTTTAATCTAAATCTTCTCCCGAGTGTTTTCAGTAATTTTAGCAAATAGTTAAGAGTATGAAGAAGATTTGTTAATTCACCTATACGTTGTACTTTTAAGCCATCTTTTTGAGTTGAATCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTTAATGGAATCAATATGTTTTTCTTGTTTGTGAGATTAGGGTTATGGGTTCGATTTTGGTCCACAAAGTTTCAAAAACTAAAACATTTTTCGTTAAAGAATGACCAATTTCATCCTATAACGAGAGTAGAACCTTGTATTTAGCTTTGTTTTTAGTACAACAATTGTTGGGTGAAGGACCGAATCTTCAACCTCTAGGTTGAAAGACCACGCCAATTACCATAGAGTTAAACTCAATTTGTCTTAGTTCGATAAACAAACGTAGAGTTATTTAGATGTGGAGTTTACAATGTAATGAGCTAATAAAGTCCTGAAATTAATATTTGTTAGTCTGGGCTCACAAACTTTTTGAGCAACCAAATATTAGAGTTAACAAACAACTCCCTCAACTCCTACTCGTTAAGCTAAATATGCCCTATGTGTTTAAAGTGTGGCTCATTGAGTATACAAGAAGAATGATATTTAATCGAATTTATAGTCCTCAATGGATGGATTACTTCTCTTTTAACTCTTCTATTTTCAGCCAAACAGAGAATTTTGCCCCAAAGAAGATTCTAAGCCAATTCTCAATTTTATTTATTGATTTATTGTTTTTTTTTTCAGAAAACAAACAGCAAGAAGACCGAACTACAGAACTACATCAACAGACACAAGTGAAACAAACCACCCAAGATAA

mRNA sequence

ATGGGGACTGTAATTTTTCATGGCCTTCCTTCCTCTGCCATTGATGCCTTTGTTATTTCAATTGTCTTTGCTTTTTCAGGTGCTTTGAGTGCTCTTTTGGTTGCTCAAAGACACAACTTAGCAGGATTTTGTGCCTTGTATTCTCTGGTTTCCATGGCTTCTGCTCTGCTTCTACTGATTTGGGGACGAAAACAAACAGCAAGAAGACCGAACTACAGAACTACATCAACAGACACAAGTGAAACAAACCACCCAAGATAA

Coding sequence (CDS)

ATGGGGACTGTAATTTTTCATGGCCTTCCTTCCTCTGCCATTGATGCCTTTGTTATTTCAATTGTCTTTGCTTTTTCAGGTGCTTTGAGTGCTCTTTTGGTTGCTCAAAGACACAACTTAGCAGGATTTTGTGCCTTGTATTCTCTGGTTTCCATGGCTTCTGCTCTGCTTCTACTGATTTGGGGACGAAAACAAACAGCAAGAAGACCGAACTACAGAACTACATCAACAGACACAAGTGAAACAAACCACCCAAGATAA

Protein sequence

MGTVIFHGLPSSAIDAFVISIVFAFSGALSALLVAQRHNLAGFCALYSLVSMASALLLLIWGRKQTARRPNYRTTSTDTSETNHPR

Homology

[Close]

BLAST of PI0010122 vs. ExPASy TrEMBL
Match: A0A5A7U2V8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold180G00460 PE=4 SV=1)

HSP 1 Score: 104.0 bits (258), Expect = 3.2e-19
Identity = 57/66 (86.36%), Postives = 60/66 (90.91%), Query Frame = 0


Query: 1  MGTVIFHGLPSSAIDAFVISIVFAFSGALSALLVAQRHNLAGFCALYSLVSMASALLLLI 60
          +GTV+FHGL SSAIDAFVISIVFAFSGALSALLV QRHNLA FCA+YSLVSMASALLLLI
Sbjct: 7  VGTVMFHGLSSSAIDAFVISIVFAFSGALSALLVPQRHNLAKFCAVYSLVSMASALLLLI 66

Query: 61 WGRKQT 67
          WG   T
Sbjct: 67 WGLYHT 72

[Close]

BLAST of PI0010122 vs. ExPASy TrEMBL
Match: A0A0A0KLQ9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G137420 PE=4 SV=1)

HSP 1 Score: 102.4 bits (254), Expect = 9.4e-19
Identity = 55/66 (83.33%), Postives = 58/66 (87.88%), Query Frame = 0


Query: 1   MGTVIFHGLPSSAIDAFVISIVFAFSGALSALLVAQRHNLAGFCALYSLVSMASALLLLI 60
           +GTVIFHG PSSAIDAF+ISIVFAFSGALSALLV QRH LA FCALYSL S+ASALLLLI
Sbjct: 56  VGTVIFHGFPSSAIDAFIISIVFAFSGALSALLVPQRHKLARFCALYSLASLASALLLLI 115

Query: 61  WGRKQT 67
           WG   T
Sbjct: 116 WGLYHT 121

[Close]

BLAST of PI0010122 vs. ExPASy TrEMBL
Match: A0A7J7HBL0 (Uncharacterized protein OS=Camellia sinensis OX=4442 GN=HYC85_011920 PE=4 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 2.0e-05
Identity = 32/62 (51.61%), Postives = 46/62 (74.19%), Query Frame = 0


Query: 3   TVIFHGLPSSAIDAFVISIVFAFSGALSALLV---AQRHNLAGFCALYSLVSMASALLLL 62
           T+IF+G+PSS   AFV+S+++AF+GAL+ALL+   A    LA FC L S++ M SA+ LL
Sbjct: 56  TMIFNGIPSSGFHAFVVSLLYAFTGALTALLIHDTAATSFLARFCELVSILCMTSAVSLL 115

[Close]

BLAST of PI0010122 vs. ExPASy TrEMBL
Match: A0A7J7H8J9 (Uncharacterized protein OS=Camellia sinensis OX=4442 GN=HYC85_011256 PE=4 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 2.6e-05
Identity = 33/62 (53.23%), Postives = 45/62 (72.58%), Query Frame = 0


Query: 3   TVIFHGLPSSAIDAFVISIVFAFSGALSALLV---AQRHNLAGFCALYSLVSMASALLLL 62
           TVIF+G+PSS   AFV+S+V+AF+GAL+ALL+        LA FC L S++ M SA+ LL
Sbjct: 56  TVIFNGIPSSWFHAFVVSLVYAFTGALTALLIHDTVAASFLARFCELVSILCMTSAVSLL 115

[Close]

BLAST of PI0010122 vs. ExPASy TrEMBL
Match: A0A6J1JTM5 (uncharacterized protein LOC111488762 OS=Cucurbita maxima OX=3661 GN=LOC111488762 PE=4 SV=1)

HSP 1 Score: 57.0 bits (136), Expect = 4.5e-05
Identity = 34/65 (52.31%), Postives = 47/65 (72.31%), Query Frame = 0


Query: 3   TVIFHGLPSSAIDAFVISIVFAFSGALSALLV-AQRHNLAGFCALYSLVSMASALLLLIW 62
           T+IF GLPS+   AF++S V AFSGA +AL++ A +  +A FC+ YS+  MASA++LLIW
Sbjct: 103 TIIFKGLPST-FHAFLLSTVMAFSGAFNALMLSANKPKIARFCSYYSMAFMASAVVLLIW 162

Query: 63  GRKQT 67
              QT
Sbjct: 163 AVYQT 166

[Close]

BLAST of PI0010122 vs. NCBI nr
Match: KAA0050243.1 (hypothetical protein E6C27_scaffold355G00870 [Cucumis melo var. makuwa] >TYJ98163.1 hypothetical protein E5676_scaffold180G00460 [Cucumis melo var. makuwa])

HSP 1 Score: 104.0 bits (258), Expect = 6.6e-19
Identity = 57/66 (86.36%), Postives = 60/66 (90.91%), Query Frame = 0


Query: 1  MGTVIFHGLPSSAIDAFVISIVFAFSGALSALLVAQRHNLAGFCALYSLVSMASALLLLI 60
          +GTV+FHGL SSAIDAFVISIVFAFSGALSALLV QRHNLA FCA+YSLVSMASALLLLI
Sbjct: 7  VGTVMFHGLSSSAIDAFVISIVFAFSGALSALLVPQRHNLAKFCAVYSLVSMASALLLLI 66

Query: 61 WGRKQT 67
          WG   T
Sbjct: 67 WGLYHT 72

[Close]

BLAST of PI0010122 vs. NCBI nr
Match: KGN49809.1 (hypothetical protein Csa_004648 [Cucumis sativus])

HSP 1 Score: 102.4 bits (254), Expect = 1.9e-18
Identity = 55/66 (83.33%), Postives = 58/66 (87.88%), Query Frame = 0


Query: 1   MGTVIFHGLPSSAIDAFVISIVFAFSGALSALLVAQRHNLAGFCALYSLVSMASALLLLI 60
           +GTVIFHG PSSAIDAF+ISIVFAFSGALSALLV QRH LA FCALYSL S+ASALLLLI
Sbjct: 56  VGTVIFHGFPSSAIDAFIISIVFAFSGALSALLVPQRHKLARFCALYSLASLASALLLLI 115

Query: 61  WGRKQT 67
           WG   T
Sbjct: 116 WGLYHT 121

[Close]

BLAST of PI0010122 vs. NCBI nr
Match: KAG6579131.1 (hypothetical protein SDJN03_23579, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 99.0 bits (245), Expect = 2.1e-17
Identity = 54/61 (88.52%), Postives = 54/61 (88.52%), Query Frame = 0


Query: 2   GTVIFHGLPSSAIDAFVISIVFAFSGALSALLVAQRHNLAGFCALYSLVSMASALLLLIW 61
           G VIFH LPSS IDAFVISI FAFSGALSALLV QRHNLA FCALYSL SMASALLLLIW
Sbjct: 45  GNVIFHDLPSSTIDAFVISIFFAFSGALSALLVPQRHNLATFCALYSLASMASALLLLIW 104

Query: 62  G 63
           G
Sbjct: 105 G 105

[Close]

BLAST of PI0010122 vs. NCBI nr
Match: KAG6601931.1 (hypothetical protein SDJN03_07164, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 72.4 bits (176), Expect = 2.1e-09
Identity = 45/75 (60.00%), Postives = 52/75 (69.33%), Query Frame = 0


Query: 4   VIFHGL--PSSAIDAFVISIVFAFSGALSALLVAQRHNLAGFCALYSLVSMASALLLLIW 63
           +IF GL  PSSA DAFV+SI FAF GAL ALL+  + NLA F  LYS+ SMASALLLLIW
Sbjct: 48  LIFDGLSNPSSAFDAFVLSITFAFLGALGALLIPHKPNLATFYTLYSVASMASALLLLIW 107

Query: 64  GRKQTARRPNYRTTS 77
           G   +     Y TT+
Sbjct: 108 GLYYSFVHGRYSTTA 122

[Close]

BLAST of PI0010122 vs. NCBI nr
Match: KAF5949927.1 (hypothetical protein HYC85_011920 [Camellia sinensis])

HSP 1 Score: 58.2 bits (139), Expect = 4.2e-05
Identity = 32/62 (51.61%), Postives = 46/62 (74.19%), Query Frame = 0


Query: 3   TVIFHGLPSSAIDAFVISIVFAFSGALSALLV---AQRHNLAGFCALYSLVSMASALLLL 62
           T+IF+G+PSS   AFV+S+++AF+GAL+ALL+   A    LA FC L S++ M SA+ LL
Sbjct: 56  TMIFNGIPSSGFHAFVVSLLYAFTGALTALLIHDTAATSFLARFCELVSILCMTSAVSLL 115

The following BLAST results are available for this feature:

BLAST of PI0010122 vs.


Match Name	E-value	Identity	Description

BLAST of PI0010122 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7U2V8	3.2e-19	86.36	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A0A0KLQ9	9.4e-19	83.33	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G137420 PE=4 SV=1	[more]
A0A7J7HBL0	2.0e-05	51.61	Uncharacterized protein OS=Camellia sinensis OX=4442 GN=HYC85_011920 PE=4 SV=1	[more]
A0A7J7H8J9	2.6e-05	53.23	Uncharacterized protein OS=Camellia sinensis OX=4442 GN=HYC85_011256 PE=4 SV=1	[more]
A0A6J1JTM5	4.5e-05	52.31	uncharacterized protein LOC111488762 OS=Cucurbita maxima OX=3661 GN=LOC111488762...	[more]

BLAST of PI0010122 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0050243.1	6.6e-19	86.36	hypothetical protein E6C27_scaffold355G00870 [Cucumis melo var. makuwa] >TYJ9816...	[more]
KGN49809.1	1.9e-18	83.33	hypothetical protein Csa_004648 [Cucumis sativus]	[more]
KAG6579131.1	2.1e-17	88.52	hypothetical protein SDJN03_23579, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KAG6601931.1	2.1e-09	60.00	hypothetical protein SDJN03_07164, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KAF5949927.1	4.2e-05	51.61	hypothetical protein HYC85_011920 [Camellia sinensis]	[more]

BLAST of PI0010122 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 67..86
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 68..86

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0010122.1	PI0010122.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane