PI0010062 (gene) Melon (PI 482460) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTCATTTCTTCCCCACAAAAACAAACCCAAATTTCAGAAACTCTCTCTCTCTCTCTCACTGACTACAGTTTGGATTGAGAAGGAATAGAAAAAAAACCAATCCCATCAATCAGCAAAAAAAAAAAACTTAGTTGTTCTACCTTTTTTAGAAAACCCCAAACCAATATCCTTTCAACTTCACAAATCTACAACCAAAAAAAAAATCTCTCCTTTTTCATCTCCTTCTACATTTTTTTTTCAAAAAAAAACATTCAAAATCCCACCACCAGAGAGAAAGTCCAAGAAAGATAACAGCTTTCTTGTGTAGTCTTCTCAGATCTTGTTCCCTATCTCATCAAAAATCCATCTCTTTATTTACCCTTTTTTTAAAAAAAAAAAATCCTCTTCTTGTTTGGTTACAATCCCAATATCATACAGGCCTATAAGAAGGAGGAGAAAAAAAATCAAAAGAAGAAGAAGAAGAAGAAGAAACCCTAGAAGAATCTTTGAGGTGAGAGCTTTTTTATGGCAAAAACCTAAAATGTTATGAGAAAGTATAAGCTAAATTGTTACACAATATTGGTAAATTAACAATTGGGATTTACTTTCTTTCTTTCCTTTTTTCTTCCCTAATTTCTCTATTCTATCTAATTGTTGAAAATCAAATACAGCAAGCAACAGTCTTTTCTTAAAAAAAAAAAAAAAATCCAAAAAAATTAGGGATGGACTTCTCAAGTAGTAGCAGCCATAATATCATCATCAACAACAATAACAACACCATCAACCACCAACAACCTGCACCAACCTCCTCTTCAAGCAGCAGATATGAGAATCAAAAGCGTCGTGATTGGAAAACTTTCGGTCAATACCTCAACAATCATCGCCCCCCGCTCGCCCTCTCACGGTGTAGCGGAGCTCATGTTCTTGAATTCCTCAGGTATCGAACAAAGATGTTTCTTTTAGATAATATAATAAAATTATTCTCTCCCTCTCTTGGTAGATGTAACTAACACACGGTTAGTAAATCACGCGATTTTCTGTTTTGATAGGTATCTAGATCAATTTGGAAAGACAAAAGTGCACACGGCTATTTGCCCTTTCTACGGACTGCCGAACCCTCCAGCACCGTGCCCATGCCCTCTTCGGCAGGCGTGGGGGAGCCTCGACGCGTTGGTTGGACGGCTTCGAGCAGCTTTCGAAGAGAATGGTGGGAAACCAGAAGCCAATCCATTTGGGGCTAGAGCAGTGAGATTGTATCTACGTGAGGTTCGTGATTTACAATCAAAGGCAAGAGGAATTAGCTATGAGAAGAAAAGAAAACGCCCACCTTCTCAATTGCCTTTAACTCAACAAACAACTCATGGTGCATCTTCATGAAAAAAAAAGGTGCAAATTTTCAGAAAAGGAAAGAAATTCCTTAATTGGGTATTGCTCTAAACCTATTTTGAAAACATGGGTTTTCTTTAAATTTTAAATTTTTATAAGTTTTTTTTTTTTTTAATTTCTTGAATAAGTTTAAGGGTTTTCACTCTCTCTACTACGTCTGCTAGGGTTTGAAAATTTGAAGCATTTTTATTTAATTTTGGCTTTGATGAATAAATTTTTTTTTCTGAAAAAGTTTCTAAGAACGACTGTGTAAAGGTGTAGATCTCTGCTTTTGATGCAAATACTAGCAGTGTTACTATTTGTAAATTTGTACTCTCTAGTAATATTCATGTAATATGCTTATTGAACACCATGGTTTATAATTTATATTTGTCACATTTCTCTTCC TTCATTTCTTCCCCACAAAAACAAACCCAAATTTCAGAAACTCTCTCTCTCTCTCTCACTGACTACAGTTTGGATTGAGAAGGAATAGAAAAAAAACCAATCCCATCAATCAGCAAAAAAAAAAAACTTAGTTGTTCTACCTTTTTTAGAAAACCCCAAACCAATATCCTTTCAACTTCACAAATCTACAACCAAAAAAAAAATCTCTCCTTTTTCATCTCCTTCTACATTTTTTTTTCAAAAAAAAACATTCAAAATCCCACCACCAGAGAGAAAGTCCAAGAAAGATAACAGCTTTCTTGTGTAGTCTTCTCAGATCTTGTTCCCTATCTCATCAAAAATCCATCTCTTTATTTACCCTTTTTTTAAAAAAAAAAAATCCTCTTCTTGTTTGGTTACAATCCCAATATCATACAGGCCTATAAGAAGGAGGAGAAAAAAAATCAAAAGAAGAAGAAGAAGAAGAAGAAACCCTAGAAGAATCTTTGAGCAAGCAACAGTCTTTTCTTAAAAAAAAAAAAAAAATCCAAAAAAATTAGGGATGGACTTCTCAAGTAGTAGCAGCCATAATATCATCATCAACAACAATAACAACACCATCAACCACCAACAACCTGCACCAACCTCCTCTTCAAGCAGCAGATATGAGAATCAAAAGCGTCGTGATTGGAAAACTTTCGGTCAATACCTCAACAATCATCGCCCCCCGCTCGCCCTCTCACGGTGTAGCGGAGCTCATGTTCTTGAATTCCTCAGGTATCTAGATCAATTTGGAAAGACAAAAGTGCACACGGCTATTTGCCCTTTCTACGGACTGCCGAACCCTCCAGCACCGTGCCCATGCCCTCTTCGGCAGGCGTGGGGGAGCCTCGACGCGTTGGTTGGACGGCTTCGAGCAGCTTTCGAAGAGAATGGTGGGAAACCAGAAGCCAATCCATTTGGGGCTAGAGCAGTGAGATTGTATCTACGTGAGGTTCGTGATTTACAATCAAAGGCAAGAGGAATTAGCTATGAGAAGAAAAGAAAACGCCCACCTTCTCAATTGCCTTTAACTCAACAAACAACTCATGGTGCATCTTCATGAAAAAAAAAGGTGCAAATTTTCAGAAAAGGAAAGAAATTCCTTAATTGGGTATTGCTCTAAACCTATTTTGAAAACATGGGTTTTCTTTAAATTTTAAATTTTTATAAGTTTTTTTTTTTTTTAATTTCTTGAATAAGTTTAAGGGTTTTCACTCTCTCTACTACGTCTGCTAGGGTTTGAAAATTTGAAGCATTTTTATTTAATTTTGGCTTTGATGAATAAATTTTTTTTTCTGAAAAAGTTTCTAAGAACGACTGTGTAAAGGTGTAGATCTCTGCTTTTGATGCAAATACTAGCAGTGTTACTATTTGTAAATTTGTACTCTCTAGTAATATTCATGTAATATGCTTATTGAACACCATGGTTTATAATTTATATTTGTCACATTTCTCTTCC ATGGACTTCTCAAGTAGTAGCAGCCATAATATCATCATCAACAACAATAACAACACCATCAACCACCAACAACCTGCACCAACCTCCTCTTCAAGCAGCAGATATGAGAATCAAAAGCGTCGTGATTGGAAAACTTTCGGTCAATACCTCAACAATCATCGCCCCCCGCTCGCCCTCTCACGGTGTAGCGGAGCTCATGTTCTTGAATTCCTCAGGTATCTAGATCAATTTGGAAAGACAAAAGTGCACACGGCTATTTGCCCTTTCTACGGACTGCCGAACCCTCCAGCACCGTGCCCATGCCCTCTTCGGCAGGCGTGGGGGAGCCTCGACGCGTTGGTTGGACGGCTTCGAGCAGCTTTCGAAGAGAATGGTGGGAAACCAGAAGCCAATCCATTTGGGGCTAGAGCAGTGAGATTGTATCTACGTGAGGTTCGTGATTTACAATCAAAGGCAAGAGGAATTAGCTATGAGAAGAAAAGAAAACGCCCACCTTCTCAATTGCCTTTAACTCAACAAACAACTCATGGTGCATCTTCATGA MDFSSSSSHNIIINNNNNTINHQQPAPTSSSSSRYENQKRRDWKTFGQYLNNHRPPLALSRCSGAHVLEFLRYLDQFGKTKVHTAICPFYGLPNPPAPCPCPLRQAWGSLDALVGRLRAAFEENGGKPEANPFGARAVRLYLREVRDLQSKARGISYEKKRKRPPSQLPLTQQTTHGASS Homology
BLAST of PI0010062 vs. ExPASy Swiss-Prot
Match: O82268 (Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 3 OS=Arabidopsis thaliana OX=3702 GN=LSH3 PE=1 SV=1) HSP 1 Score: 262.7 bits (670), Expect = 3.1e-69 Identity = 133/179 (74.30%), Postives = 146/179 (81.56%), Query Frame = 0
BLAST of PI0010062 vs. ExPASy Swiss-Prot
Match: Q9LW68 (Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 4 OS=Arabidopsis thaliana OX=3702 GN=LSH4 PE=1 SV=1) HSP 1 Score: 260.0 bits (663), Expect = 2.0e-68 Identity = 123/141 (87.23%), Postives = 128/141 (90.78%), Query Frame = 0
BLAST of PI0010062 vs. ExPASy Swiss-Prot
Match: A2XAV5 (Protein G1-like6 OS=Oryza sativa subsp. indica OX=39946 GN=OsI_09389 PE=3 SV=1) HSP 1 Score: 258.1 bits (658), Expect = 7.5e-68 Identity = 118/144 (81.94%), Postives = 133/144 (92.36%), Query Frame = 0
BLAST of PI0010062 vs. ExPASy Swiss-Prot
Match: Q6K5X1 (Protein G1-like6 OS=Oryza sativa subsp. japonica OX=39947 GN=G1L6 PE=1 SV=1) HSP 1 Score: 258.1 bits (658), Expect = 7.5e-68 Identity = 118/144 (81.94%), Postives = 133/144 (92.36%), Query Frame = 0
BLAST of PI0010062 vs. ExPASy Swiss-Prot
Match: A2YG32 (Protein G1-like2 OS=Oryza sativa subsp. indica OX=39946 GN=OsI_24078 PE=3 SV=1) HSP 1 Score: 253.1 bits (645), Expect = 2.4e-66 Identity = 121/149 (81.21%), Postives = 132/149 (88.59%), Query Frame = 0
BLAST of PI0010062 vs. ExPASy TrEMBL
Match: A0A0A0L7E1 (ALOG domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G383760 PE=3 SV=1) HSP 1 Score: 367.9 bits (943), Expect = 2.5e-98 Identity = 179/180 (99.44%), Postives = 179/180 (99.44%), Query Frame = 0
BLAST of PI0010062 vs. ExPASy TrEMBL
Match: A0A5D3DAV8 (Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold237G001490 PE=3 SV=1) HSP 1 Score: 366.3 bits (939), Expect = 7.3e-98 Identity = 178/180 (98.89%), Postives = 180/180 (100.00%), Query Frame = 0
BLAST of PI0010062 vs. ExPASy TrEMBL
Match: A0A1S3BGU6 (protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 3-like OS=Cucumis melo OX=3656 GN=LOC103489867 PE=3 SV=1) HSP 1 Score: 366.3 bits (939), Expect = 7.3e-98 Identity = 178/180 (98.89%), Postives = 180/180 (100.00%), Query Frame = 0
BLAST of PI0010062 vs. ExPASy TrEMBL
Match: A0A6J1DS94 (protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 3-like OS=Momordica charantia OX=3673 GN=LOC111022718 PE=3 SV=1) HSP 1 Score: 322.8 bits (826), Expect = 9.2e-85 Identity = 160/179 (89.39%), Postives = 164/179 (91.62%), Query Frame = 0
BLAST of PI0010062 vs. ExPASy TrEMBL
Match: A0A6J1ETL1 (protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 3-like OS=Cucurbita moschata OX=3662 GN=LOC111437437 PE=3 SV=1) HSP 1 Score: 319.3 bits (817), Expect = 1.0e-83 Identity = 157/174 (90.23%), Postives = 162/174 (93.10%), Query Frame = 0
BLAST of PI0010062 vs. NCBI nr
Match: XP_004152053.1 (protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 3 [Cucumis sativus] >KGN57900.1 hypothetical protein Csa_011754 [Cucumis sativus]) HSP 1 Score: 367.9 bits (943), Expect = 5.2e-98 Identity = 179/180 (99.44%), Postives = 179/180 (99.44%), Query Frame = 0
BLAST of PI0010062 vs. NCBI nr
Match: XP_008447415.1 (PREDICTED: protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 3-like [Cucumis melo] >KAA0038043.1 protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 3-like [Cucumis melo var. makuwa] >TYK20560.1 protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 3-like [Cucumis melo var. makuwa]) HSP 1 Score: 366.3 bits (939), Expect = 1.5e-97 Identity = 178/180 (98.89%), Postives = 180/180 (100.00%), Query Frame = 0
BLAST of PI0010062 vs. NCBI nr
Match: XP_038888358.1 (protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 3-like [Benincasa hispida] >XP_038888359.1 protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 3-like [Benincasa hispida]) HSP 1 Score: 342.8 bits (878), Expect = 1.8e-90 Identity = 172/183 (93.99%), Postives = 174/183 (95.08%), Query Frame = 0
BLAST of PI0010062 vs. NCBI nr
Match: KAG7036313.1 (Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 3 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 325.5 bits (833), Expect = 2.9e-85 Identity = 158/170 (92.94%), Postives = 162/170 (95.29%), Query Frame = 0
BLAST of PI0010062 vs. NCBI nr
Match: XP_022155631.1 (protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 3-like [Momordica charantia] >XP_022155633.1 protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 3-like [Momordica charantia]) HSP 1 Score: 322.8 bits (826), Expect = 1.9e-84 Identity = 160/179 (89.39%), Postives = 164/179 (91.62%), Query Frame = 0
BLAST of PI0010062 vs. TAIR 10
Match: AT2G31160.1 (Protein of unknown function (DUF640) ) HSP 1 Score: 262.7 bits (670), Expect = 2.2e-70 Identity = 133/179 (74.30%), Postives = 146/179 (81.56%), Query Frame = 0
BLAST of PI0010062 vs. TAIR 10
Match: AT3G23290.2 (Protein of unknown function (DUF640) ) HSP 1 Score: 260.0 bits (663), Expect = 1.4e-69 Identity = 123/141 (87.23%), Postives = 128/141 (90.78%), Query Frame = 0
BLAST of PI0010062 vs. TAIR 10
Match: AT5G28490.1 (Protein of unknown function (DUF640) ) HSP 1 Score: 249.2 bits (635), Expect = 2.5e-66 Identity = 121/161 (75.16%), Postives = 133/161 (82.61%), Query Frame = 0
BLAST of PI0010062 vs. TAIR 10
Match: AT3G04510.1 (Protein of unknown function (DUF640) ) HSP 1 Score: 243.4 bits (620), Expect = 1.4e-64 Identity = 124/185 (67.03%), Postives = 144/185 (77.84%), Query Frame = 0
BLAST of PI0010062 vs. TAIR 10
Match: AT1G07090.1 (Protein of unknown function (DUF640) ) HSP 1 Score: 229.2 bits (583), Expect = 2.7e-60 Identity = 109/159 (68.55%), Postives = 131/159 (82.39%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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