PI0009783 (gene) Melon (PI 482460) v1

Overview


Name	PI0009783
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	GATA zinc finger domain-containing protein 10-like isoform X2
Location	chr06: 24742920 .. 24744600 (-)
RNA-Seq Expression	PI0009783
Synteny	PI0009783

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGGAACCTGTTAGCAGTCAGGTGCGTGAAGATTGGCTTAATTTGTGTCATATGTTCCTTGGTGTGATCCCACCTGCTAATAAAATAAAGGGATCAAGATTAAGTCTCACGTGGTTAGCGACAGAATTTTCGAGACTTAATGATGATGCAGAAGAGGAAAACGTCATCATATATGCAAGAGCATACATTTTACAATTAATGGGTGGGAGTCTATTTTCTGACAAATCGGGTCGGTTTGTACATCTGATGTTCCTGCCATTATTGGGCGATTTACATGAGGTGGGTCGAGACTCATGGGGTGGAGCATGCTTGGCATGGTTGTACAGACAACTATGCAAAGCAGCAAAGCGAGATGTTCATCGGTCCGTTGATACTACTTCAAATATGGGCTTAGGAATGATTTCCCACAATGGCTCCACAACTAAGACATGCAAACAATCATCTACTACCTGGACGAGCACACGGTTCATGGTATGCTATTTTATTTTAACTTAGATGAAACAATAGTTTTAATACTAAATGAGTTATATAATTAATTCAAAATCTAAAATATTAGTTTATTAATACATATGGAGAGACCAATTTTGTGTAACAAGATCAGCTACTCATGTACATGTTTGATCTTCTTCAGCGTGATCAGGTACGTCAATACTGAAGCTTGAACTTTTTTATACATTAGTATACATATATTTAGTGATTTTTAATGTAATGTGTGATATTTCAGATTATTTGGGAGCCTTACAAAAATGTAATTCATAATTTACCCAAATTTTGTAAGAACGATCAAGATATATGGCAGACCATCAGTCCTCTCATATGTTTTCATATTGGTGAGTGACATTATCCTAATATGGTGATCAGACAATTCGGTTTTAAACAAGATGTCTCATCAGAATGCAATACTGAGCCACTCCTGCACATATTGACTTGAGAGCCACGGATTGCCAGACAAGGTTGTACATTTGGTAGTGCGATGACAATCTCGTAGAAGATTTATTGTCATTGGAGTTTCGATTCAGCAATTTGATCGGGATGTGACTCAAGAATACATCCACTGGTATAATAATATTACGAGGCTCTACATCACTCGACCAGGAGCAGCTGTGGGTCATCTGGTATGTATTTAAATATTGAATAATTACTTTAAATTATTTACTCAATTAACTATTCTCTAATTTTTTTAAAATTCACAGAGATCGAACAACAGAAGACTTCGTGATGTTGCAGATGATCCACAACAAGTCCTTGATATATGTAATAATAATGAGATGTACATGGAGGAGATACATTATATGTACGATGTACCTATTGTACCTCCACCAGTTAATAGGGGACGTGTTCGAGTGGAAGAACCTGAACTCGATGAAATTTACCATAACGTAAAAGAAGTACCTCCAGTGACACAAACACAGAGCCAAACTGGTTATGGTAGCACGATGATGATGATGCCAGCATTTGGAGCAGGATATTGTTATTCTGAGGTCGGTACTGGATATTATGACTCAGGGGTCGGTCCATCGTCTTCATACATGGATGTCGGACCATCAACTTCTTACATGCATGGACATGGACACGGACGCGCCCGCGGAGAACATAACGAATATTTGTACTATGAAGCACCTACGGACATCCCAGATCCACAAGAGCCCAACAAGAACCAGAGAATCAAGAGGAGCTAG

mRNA sequence

ATGGGGAACCTGTTAGCAAGATCGAACAACAGAAGACTTCGTGATGTTGCAGATGATCCACAACAAGTCCTTGATATATGTAATAATAATGAGATGTACATGGAGGAGATACATTATATGTACGATGTACCTATTGTACCTCCACCAGTTAATAGGGGACGTGTTCGAGTGGAAGAACCTGAACTCGATGAAATTTACCATAACGTAAAAGAAGTACCTCCAGTGACACAAACACAGAGCCAAACTGGTTATGGTAGCACGATGATGATGATGCCAGCATTTGGAGCAGGATATTGTTATTCTGAGGTCGGTACTGGATATTATGACTCAGGGGTCGGTCCATCGTCTTCATACATGGATGTCGGACCATCAACTTCTTACATGCATGGACATGGACACGGACGCGCCCGCGGAGAACATAACGAATATTTGTACTATGAAGCACCTACGGACATCCCAGATCCACAAGAGCCCAACAAGAACCAGAGAATCAAGAGGAGCTAG

Coding sequence (CDS)

ATGGGGAACCTGTTAGCAAGATCGAACAACAGAAGACTTCGTGATGTTGCAGATGATCCACAACAAGTCCTTGATATATGTAATAATAATGAGATGTACATGGAGGAGATACATTATATGTACGATGTACCTATTGTACCTCCACCAGTTAATAGGGGACGTGTTCGAGTGGAAGAACCTGAACTCGATGAAATTTACCATAACGTAAAAGAAGTACCTCCAGTGACACAAACACAGAGCCAAACTGGTTATGGTAGCACGATGATGATGATGCCAGCATTTGGAGCAGGATATTGTTATTCTGAGGTCGGTACTGGATATTATGACTCAGGGGTCGGTCCATCGTCTTCATACATGGATGTCGGACCATCAACTTCTTACATGCATGGACATGGACACGGACGCGCCCGCGGAGAACATAACGAATATTTGTACTATGAAGCACCTACGGACATCCCAGATCCACAAGAGCCCAACAAGAACCAGAGAATCAAGAGGAGCTAG

Protein sequence

MGNLLARSNNRRLRDVADDPQQVLDICNNNEMYMEEIHYMYDVPIVPPPVNRGRVRVEEPELDEIYHNVKEVPPVTQTQSQTGYGSTMMMMPAFGAGYCYSEVGTGYYDSGVGPSSSYMDVGPSTSYMHGHGHGRARGEHNEYLYYEAPTDIPDPQEPNKNQRIKRS

Homology

[Close]

BLAST of PI0009783 vs. ExPASy TrEMBL
Match: A0A5D3DJV7 (Serine/threonine-protein phosphatase 7 long form-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold419G00060 PE=4 SV=1)

HSP 1 Score: 241.1 bits (614), Expect = 3.3e-60
Identity = 118/151 (78.15%), Postives = 129/151 (85.43%), Query Frame = 0


Query: 7   RSNNRRLRDVADDPQQVLDICNNNEMYMEEIHYMYDVPIVPPPVNRGRVRVEEPELDEIY 66
           RSNN RLRDV +DPQQVLDICNNNE YME+IH +YD+PIVPPPV+R R RVEE ELDE+Y
Sbjct: 317 RSNNARLRDVVNDPQQVLDICNNNERYMEKIHNIYDLPIVPPPVHRERFRVEEAELDEVY 376

Query: 67  HNVKEVPPVTQTQSQTGYGSTMMMMPAFGAGYCYSEVGTGYYDSGVGPSSSYMDVGPSTS 126
           HNV+EVPP TQTQSQTGYGS M MMP FGAGYC SEV  GYYD+ VGP SSYMDVGPSTS
Sbjct: 377 HNVEEVPPTTQTQSQTGYGSPMTMMPTFGAGYCDSEVSIGYYDAVVGPLSSYMDVGPSTS 436

Query: 127 YMHGHGHGRARGEHNEYLYYEAPTDIPDPQE 158
           YM+GHG G   GEHNEYLY+EAPTD+ D QE
Sbjct: 437 YMYGHGRG--YGEHNEYLYHEAPTDVSDRQE 465

[Close]

BLAST of PI0009783 vs. ExPASy TrEMBL
Match: A0A5A7VEC1 (GATA zinc finger domain-containing protein 10-like isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold119G001470 PE=4 SV=1)

HSP 1 Score: 240.0 bits (611), Expect = 7.3e-60
Identity = 117/152 (76.97%), Postives = 130/152 (85.53%), Query Frame = 0


Query: 3   NLLARSNNRRLRDVADDPQQVLDICNNNEMYMEEIHYMYDVPIVPPPVNRGRVRVEEPEL 62
           N+ +RSNN RLRDVADDPQQVLDICNNNE YMEEIH MYD+PIVP P++RGR+RVEE EL
Sbjct: 62  NIPSRSNNARLRDVADDPQQVLDICNNNERYMEEIHNMYDLPIVPLPIHRGRIRVEEAEL 121

Query: 63  DEIYHNVKEVPPVTQTQSQTGYGSTMMMMPAFGAGYCYSEVGTGYYDSGVGPSSSYMDVG 122
           DE+YHNV+EVPP T+TQSQTGYGS M MMP FGA YC SEVG GYYD+GV  SSSYMDVG
Sbjct: 122 DEVYHNVEEVPPTTKTQSQTGYGSLMTMMPTFGARYCDSEVGRGYYDAGVDLSSSYMDVG 181

Query: 123 PSTSYMHGHGHGRARGEHNEYLYYEAPTDIPD 155
           PSTSYMHG+  G   GEHNEYLY+EAP D+ D
Sbjct: 182 PSTSYMHGYERG--YGEHNEYLYHEAPADVSD 211

[Close]

BLAST of PI0009783 vs. ExPASy TrEMBL
Match: A0A5A7V342 (Mediator of RNA polymerase II transcription subunit 12-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold79G001560 PE=4 SV=1)

HSP 1 Score: 238.0 bits (606), Expect = 2.8e-59
Identity = 118/156 (75.64%), Postives = 128/156 (82.05%), Query Frame = 0


Query: 2   GNLLARSNNRRLRDVADDPQQVLDICNNNEMYMEEIHYMYDVPIVPPPVNRGRVRVEEPE 61
           G  + RSNN RLRDVADD QQ LDICNNNE YMEEIH MYD+PIVPPPV+RG VRVEE E
Sbjct: 34  GAAVGRSNNARLRDVADDLQQFLDICNNNERYMEEIHNMYDLPIVPPPVHRGCVRVEEAE 93

Query: 62  LDEIYHNVKEVPPVTQTQSQTGYGSTMMMMPAFGAGYCYSEVGTGYYDSGVGPSSSYMDV 121
           LD++YHNV+EVP  TQTQSQTGYGS M MMP F AGYC  EVG GYYD+GVGPSSSY+DV
Sbjct: 94  LDKVYHNVEEVPSTTQTQSQTGYGSPMTMMPTFEAGYCDFEVGIGYYDAGVGPSSSYVDV 153

Query: 122 GPSTSYMHGHGHGRARGEHNEYLYYEAPTDIPDPQE 158
            PSTSYMHGH  G   GEHNEYLY+EAP D+ D QE
Sbjct: 154 SPSTSYMHGHSRG--YGEHNEYLYHEAPADVSDRQE 187

[Close]

BLAST of PI0009783 vs. ExPASy TrEMBL
Match: A0A5D3BSG8 (GATA zinc finger domain-containing protein 10-like isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2044G00130 PE=4 SV=1)

HSP 1 Score: 235.3 bits (599), Expect = 1.8e-58
Identity = 117/151 (77.48%), Postives = 126/151 (83.44%), Query Frame = 0


Query: 7   RSNNRRLRDVADDPQQVLDICNNNEMYMEEIHYMYDVPIVPPPVNRGRVRVEEPELDEIY 66
           RSNN RLRDVADD QQ LDICNNNE YMEEIH MYD+PIVPPPV+RG VRVEE ELD++Y
Sbjct: 27  RSNNARLRDVADDLQQFLDICNNNERYMEEIHNMYDLPIVPPPVHRGCVRVEEAELDKVY 86

Query: 67  HNVKEVPPVTQTQSQTGYGSTMMMMPAFGAGYCYSEVGTGYYDSGVGPSSSYMDVGPSTS 126
           HNV+EVP  TQTQSQTGYGS M MMP F AGYC  EVG GYYD+GVGPSSSY+DV PSTS
Sbjct: 87  HNVEEVPSTTQTQSQTGYGSPMTMMPTFEAGYCDFEVGIGYYDAGVGPSSSYVDVSPSTS 146

Query: 127 YMHGHGHGRARGEHNEYLYYEAPTDIPDPQE 158
           YMHGH  G   GEHNEYLY+EAP D+ D QE
Sbjct: 147 YMHGHRRG--YGEHNEYLYHEAPADVSDRQE 175

[Close]

BLAST of PI0009783 vs. ExPASy TrEMBL
Match: A0A5A7SLF8 (Mediator of RNA polymerase II transcription subunit 12-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold34G002870 PE=4 SV=1)

HSP 1 Score: 231.9 bits (590), Expect = 2.0e-57
Identity = 113/151 (74.83%), Postives = 127/151 (84.11%), Query Frame = 0


Query: 7   RSNNRRLRDVADDPQQVLDICNNNEMYMEEIHYMYDVPIVPPPVNRGRVRVEEPELDEIY 66
           RSNN RLRDVADD QQVLDICNNN+ +MEEIH MY +PIVPP ++RGRV+VEE ELDE+Y
Sbjct: 36  RSNNARLRDVADDSQQVLDICNNNKRHMEEIHNMYHLPIVPPQIHRGRVQVEEAELDEVY 95

Query: 67  HNVKEVPPVTQTQSQTGYGSTMMMMPAFGAGYCYSEVGTGYYDSGVGPSSSYMDVGPSTS 126
           HNV+E+ P TQ Q+QTGYGS M+MMP FG GYC  EV T YYDSGVGPSSSYMDVGPSTS
Sbjct: 96  HNVEEMTPTTQKQNQTGYGSPMIMMPTFGVGYCDFEVNTEYYDSGVGPSSSYMDVGPSTS 155

Query: 127 YMHGHGHGRARGEHNEYLYYEAPTDIPDPQE 158
           YMHGH H    GEHNEYLY+EAPT++ D QE
Sbjct: 156 YMHGHRHD--YGEHNEYLYHEAPTEVSDRQE 184

[Close]

BLAST of PI0009783 vs. NCBI nr
Match: TYK23842.1 (serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 241.1 bits (614), Expect = 6.8e-60
Identity = 118/151 (78.15%), Postives = 129/151 (85.43%), Query Frame = 0


Query: 7   RSNNRRLRDVADDPQQVLDICNNNEMYMEEIHYMYDVPIVPPPVNRGRVRVEEPELDEIY 66
           RSNN RLRDV +DPQQVLDICNNNE YME+IH +YD+PIVPPPV+R R RVEE ELDE+Y
Sbjct: 317 RSNNARLRDVVNDPQQVLDICNNNERYMEKIHNIYDLPIVPPPVHRERFRVEEAELDEVY 376

Query: 67  HNVKEVPPVTQTQSQTGYGSTMMMMPAFGAGYCYSEVGTGYYDSGVGPSSSYMDVGPSTS 126
           HNV+EVPP TQTQSQTGYGS M MMP FGAGYC SEV  GYYD+ VGP SSYMDVGPSTS
Sbjct: 377 HNVEEVPPTTQTQSQTGYGSPMTMMPTFGAGYCDSEVSIGYYDAVVGPLSSYMDVGPSTS 436

Query: 127 YMHGHGHGRARGEHNEYLYYEAPTDIPDPQE 158
           YM+GHG G   GEHNEYLY+EAPTD+ D QE
Sbjct: 437 YMYGHGRG--YGEHNEYLYHEAPTDVSDRQE 465

[Close]

BLAST of PI0009783 vs. NCBI nr
Match: KAA0064245.1 (GATA zinc finger domain-containing protein 10-like isoform X2 [Cucumis melo var. makuwa] >TYK18615.1 GATA zinc finger domain-containing protein 10-like isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 240.0 bits (611), Expect = 1.5e-59
Identity = 117/152 (76.97%), Postives = 130/152 (85.53%), Query Frame = 0


Query: 3   NLLARSNNRRLRDVADDPQQVLDICNNNEMYMEEIHYMYDVPIVPPPVNRGRVRVEEPEL 62
           N+ +RSNN RLRDVADDPQQVLDICNNNE YMEEIH MYD+PIVP P++RGR+RVEE EL
Sbjct: 62  NIPSRSNNARLRDVADDPQQVLDICNNNERYMEEIHNMYDLPIVPLPIHRGRIRVEEAEL 121

Query: 63  DEIYHNVKEVPPVTQTQSQTGYGSTMMMMPAFGAGYCYSEVGTGYYDSGVGPSSSYMDVG 122
           DE+YHNV+EVPP T+TQSQTGYGS M MMP FGA YC SEVG GYYD+GV  SSSYMDVG
Sbjct: 122 DEVYHNVEEVPPTTKTQSQTGYGSLMTMMPTFGARYCDSEVGRGYYDAGVDLSSSYMDVG 181

Query: 123 PSTSYMHGHGHGRARGEHNEYLYYEAPTDIPD 155
           PSTSYMHG+  G   GEHNEYLY+EAP D+ D
Sbjct: 182 PSTSYMHGYERG--YGEHNEYLYHEAPADVSD 211

[Close]

BLAST of PI0009783 vs. NCBI nr
Match: KAA0062642.1 (mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 238.0 bits (606), Expect = 5.7e-59
Identity = 118/156 (75.64%), Postives = 128/156 (82.05%), Query Frame = 0


Query: 2   GNLLARSNNRRLRDVADDPQQVLDICNNNEMYMEEIHYMYDVPIVPPPVNRGRVRVEEPE 61
           G  + RSNN RLRDVADD QQ LDICNNNE YMEEIH MYD+PIVPPPV+RG VRVEE E
Sbjct: 34  GAAVGRSNNARLRDVADDLQQFLDICNNNERYMEEIHNMYDLPIVPPPVHRGCVRVEEAE 93

Query: 62  LDEIYHNVKEVPPVTQTQSQTGYGSTMMMMPAFGAGYCYSEVGTGYYDSGVGPSSSYMDV 121
           LD++YHNV+EVP  TQTQSQTGYGS M MMP F AGYC  EVG GYYD+GVGPSSSY+DV
Sbjct: 94  LDKVYHNVEEVPSTTQTQSQTGYGSPMTMMPTFEAGYCDFEVGIGYYDAGVGPSSSYVDV 153

Query: 122 GPSTSYMHGHGHGRARGEHNEYLYYEAPTDIPDPQE 158
            PSTSYMHGH  G   GEHNEYLY+EAP D+ D QE
Sbjct: 154 SPSTSYMHGHSRG--YGEHNEYLYHEAPADVSDRQE 187

[Close]

BLAST of PI0009783 vs. NCBI nr
Match: TYK01176.1 (GATA zinc finger domain-containing protein 10-like isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 235.3 bits (599), Expect = 3.7e-58
Identity = 117/151 (77.48%), Postives = 126/151 (83.44%), Query Frame = 0


Query: 7   RSNNRRLRDVADDPQQVLDICNNNEMYMEEIHYMYDVPIVPPPVNRGRVRVEEPELDEIY 66
           RSNN RLRDVADD QQ LDICNNNE YMEEIH MYD+PIVPPPV+RG VRVEE ELD++Y
Sbjct: 27  RSNNARLRDVADDLQQFLDICNNNERYMEEIHNMYDLPIVPPPVHRGCVRVEEAELDKVY 86

Query: 67  HNVKEVPPVTQTQSQTGYGSTMMMMPAFGAGYCYSEVGTGYYDSGVGPSSSYMDVGPSTS 126
           HNV+EVP  TQTQSQTGYGS M MMP F AGYC  EVG GYYD+GVGPSSSY+DV PSTS
Sbjct: 87  HNVEEVPSTTQTQSQTGYGSPMTMMPTFEAGYCDFEVGIGYYDAGVGPSSSYVDVSPSTS 146

Query: 127 YMHGHGHGRARGEHNEYLYYEAPTDIPDPQE 158
           YMHGH  G   GEHNEYLY+EAP D+ D QE
Sbjct: 147 YMHGHRRG--YGEHNEYLYHEAPADVSDRQE 175

[Close]

BLAST of PI0009783 vs. NCBI nr
Match: KAA0025972.1 (mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 231.9 bits (590), Expect = 4.1e-57
Identity = 113/151 (74.83%), Postives = 127/151 (84.11%), Query Frame = 0


Query: 7   RSNNRRLRDVADDPQQVLDICNNNEMYMEEIHYMYDVPIVPPPVNRGRVRVEEPELDEIY 66
           RSNN RLRDVADD QQVLDICNNN+ +MEEIH MY +PIVPP ++RGRV+VEE ELDE+Y
Sbjct: 36  RSNNARLRDVADDSQQVLDICNNNKRHMEEIHNMYHLPIVPPQIHRGRVQVEEAELDEVY 95

Query: 67  HNVKEVPPVTQTQSQTGYGSTMMMMPAFGAGYCYSEVGTGYYDSGVGPSSSYMDVGPSTS 126
           HNV+E+ P TQ Q+QTGYGS M+MMP FG GYC  EV T YYDSGVGPSSSYMDVGPSTS
Sbjct: 96  HNVEEMTPTTQKQNQTGYGSPMIMMPTFGVGYCDFEVNTEYYDSGVGPSSSYMDVGPSTS 155

Query: 127 YMHGHGHGRARGEHNEYLYYEAPTDIPDPQE 158
           YMHGH H    GEHNEYLY+EAPT++ D QE
Sbjct: 156 YMHGHRHD--YGEHNEYLYHEAPTEVSDRQE 184

The following BLAST results are available for this feature:

BLAST of PI0009783 vs.


Match Name	E-value	Identity	Description

BLAST of PI0009783 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3DJV7	3.3e-60	78.15	Serine/threonine-protein phosphatase 7 long form-like protein OS=Cucumis melo va...	[more]
A0A5A7VEC1	7.3e-60	76.97	GATA zinc finger domain-containing protein 10-like isoform X2 OS=Cucumis melo va...	[more]
A0A5A7V342	2.8e-59	75.64	Mediator of RNA polymerase II transcription subunit 12-like isoform X1 OS=Cucumi...	[more]
A0A5D3BSG8	1.8e-58	77.48	GATA zinc finger domain-containing protein 10-like isoform X2 OS=Cucumis melo va...	[more]
A0A5A7SLF8	2.0e-57	74.83	Mediator of RNA polymerase II transcription subunit 12-like isoform X1 OS=Cucumi...	[more]

BLAST of PI0009783 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK23842.1	6.8e-60	78.15	serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var....	[more]
KAA0064245.1	1.5e-59	76.97	GATA zinc finger domain-containing protein 10-like isoform X2 [Cucumis melo var....	[more]
KAA0062642.1	5.7e-59	75.64	mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis ...	[more]
TYK01176.1	3.7e-58	77.48	GATA zinc finger domain-containing protein 10-like isoform X2 [Cucumis melo var....	[more]
KAA0025972.1	4.1e-57	74.83	mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis ...	[more]

BLAST of PI0009783 vs. NCBI nr


Match Name	E-value	Identity	Description

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0009783.1	PI0009783.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010073	meristem maintenance