PI0009516 (gene) Melon (PI 482460) v1

Overview


Name	PI0009516
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	homeobox protein knotted-1-like 2
Location	chr02: 24377034 .. 24378631 (+)
RNA-Seq Expression	PI0009516
Synteny	PI0009516

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GATACATTCACGATCATCTGTTTGCATTCCTTTTTAAATAAATATTTGAAATATTTGTACAAAAGAAACCAGAAATAATCCGATATTTTGGTAAAACGTACCAACATCATCACCGACGTTAGTAAGGTAAGTATTTATCTTAACGCTTAACACATTTTCCTTTCCGTACTAAATAACTAAATAAATAAAAATAACAGTCTGACTCCCACTCGCCGTGAGGTGTGTCTCTCCAGATGGCTCACACTTGCAGTTCCGTAGCCTACTCTCTATCTCTCTCTACCTCTACGTCCATAAATAATTCTTCAATTTTTCTCTCTCCCCCGTCGACCATGGCGGGTCTTTACGGACTCCATCCCCTCGCCGGTAACTCTCATTACTCATCCTCAACGACGACGTTGGAGACTCTTGCCATTCCGATGGCTTCTGCCGATTATTCTCACCCGCTTCCGGATTTCGAATCAGAACATTTCCTGCCGTTTTCGTCGGCGACCTGCAACGCTACTCTTGTGGCGGAGGAGATCAAAACAGCTTGTGCTAATTCCGAGGAGGAGTCCGCCGGTGTAATTAGAGCGAAAATTGCTTCTCATCCTCTTTACCCTAAGCTCGTCGATGCGTTTTTGAACTGCCAAAAGGTGGTTTAATTTTCTATTATGAGATCTAAGAACGCGACATTCTTAGGGTTTAAAGACACGGAATAATGCTCGCGGTTTTGGATGTTGAGGAACGAAGGAAAATTCCTAAAAATTCGTTTGAATTATAATTTCTCTATACCGATATTGGTTGATTATGCCACTTATAATTCAGTAGTTTTACATTTGTTTTCATCTTGAATCATGAAGTTTTAGTTCATCTCCATTTTTGAGAGTAAGATTTCAGTAAATCGCATCTCAATTAGGGGAAACACGAAACGAAAACCGATGATACTAGTAGGAAAATCAACAGTTTCGAATCTAAAGTCTGCGAGCTACAGTTTAATTTGCTTCGGGTGTAGATTCGTTAGTTTTTCTGATTCAATCCTTTATGGCCTTTTCAGGTCGGCGCACCGCCGGAAGTTGCTAAAATTCTAGACCAATGCAACCGTGGAAATAACATCAGCAAAGAAACTCCCGGCGTTTCAACTTGCTTGGGTACTGATCCCGAACTGGACGAATTCATGGTATTTACCTTACTTTGCTTTTCGCGGTGATTGAACGTTAGATAGTTTATATTTTGATTAGTTTTATTTACAATTTCAAACAGGGAATATTCTGCGGGCTATTAGCCAAATACGAGTTGGATCTGTATCAGCCCTTGGAGGAAGCATCTTCCTTCCTCAAGAACATGGGAAGGCAGTTAAATTTGCTCTGTAAGGGCACTACCAGAGGCTACGTTTCCGGTTCGTCATTCTCTCGCTTTTATAATACAGCAATCTGTTGATTTGATTTCTTATTTTATTGAGTTCGTTGGTGTTTGTGTTTTTGTGGGATTTATTATTTTCTGCTTTTTCACTGATTTGCTTATGTCGTTCGTGTGATCGTGTCTGAGCCTGCTGCTCTGTGGTATAGCCGTAGACCTGTAGGGGCCAACTTTCTTTTTCGAGAATGACAGTTTTTTGTTTC

mRNA sequence

GATACATTCACGATCATCTGTTTGCATTCCTTTTTAAATAAATATTTGAAATATTTGTACAAAAGAAACCAGAAATAATCCGATATTTTGGTAAAACGTACCAACATCATCACCGACGTTAGTAAGGTAAGTATTTATCTTAACGCTTAACACATTTTCCTTTCCGTACTAAATAACTAAATAAATAAAAATAACAGTCTGACTCCCACTCGCCGTGAGGTGTGTCTCTCCAGATGGCTCACACTTGCAGTTCCGTAGCCTACTCTCTATCTCTCTCTACCTCTACGTCCATAAATAATTCTTCAATTTTTCTCTCTCCCCCGTCGACCATGGCGGGTCTTTACGGACTCCATCCCCTCGCCGGTAACTCTCATTACTCATCCTCAACGACGACGTTGGAGACTCTTGCCATTCCGATGGCTTCTGCCGATTATTCTCACCCGCTTCCGGATTTCGAATCAGAACATTTCCTGCCGTTTTCGTCGGCGACCTGCAACGCTACTCTTGTGGCGGAGGAGATCAAAACAGCTTGTGCTAATTCCGAGGAGGAGTCCGCCGGTGTAATTAGAGCGAAAATTGCTTCTCATCCTCTTTACCCTAAGCTCGTCGATGCGTTTTTGAACTGCCAAAAGGTCGGCGCACCGCCGGAAGTTGCTAAAATTCTAGACCAATGCAACCGTGGAAATAACATCAGCAAAGAAACTCCCGGCGTTTCAACTTGCTTGGGTACTGATCCCGAACTGGACGAATTCATGGGAATATTCTGCGGGCTATTAGCCAAATACGAGTTGGATCTGTATCAGCCCTTGGAGGAAGCATCTTCCTTCCTCAAGAACATGGGAAGGCAGTTAAATTTGCTCTGTAAGGGCACTACCAGAGGCTACGTTTCCGGTTCGTCATTCTCTCGCTTTTATAATACAGCAATCTGTTGATTTGATTTCTTATTTTATTGAGTTCGTTGGTGTTTGTGTTTTTGTGGGATTTATTATTTTCTGCTTTTTCACTGATTTGCTTATGTCGTTCGTGTGATCGTGTCTGAGCCTGCTGCTCTGTGGTATAGCCGTAGACCTGTAGGGGCCAACTTTCTTTTTCGAGAATGACAGTTTTTTGTTTC

Coding sequence (CDS)

ATGGCTCACACTTGCAGTTCCGTAGCCTACTCTCTATCTCTCTCTACCTCTACGTCCATAAATAATTCTTCAATTTTTCTCTCTCCCCCGTCGACCATGGCGGGTCTTTACGGACTCCATCCCCTCGCCGGTAACTCTCATTACTCATCCTCAACGACGACGTTGGAGACTCTTGCCATTCCGATGGCTTCTGCCGATTATTCTCACCCGCTTCCGGATTTCGAATCAGAACATTTCCTGCCGTTTTCGTCGGCGACCTGCAACGCTACTCTTGTGGCGGAGGAGATCAAAACAGCTTGTGCTAATTCCGAGGAGGAGTCCGCCGGTGTAATTAGAGCGAAAATTGCTTCTCATCCTCTTTACCCTAAGCTCGTCGATGCGTTTTTGAACTGCCAAAAGGTCGGCGCACCGCCGGAAGTTGCTAAAATTCTAGACCAATGCAACCGTGGAAATAACATCAGCAAAGAAACTCCCGGCGTTTCAACTTGCTTGGGTACTGATCCCGAACTGGACGAATTCATGGGAATATTCTGCGGGCTATTAGCCAAATACGAGTTGGATCTGTATCAGCCCTTGGAGGAAGCATCTTCCTTCCTCAAGAACATGGGAAGGCAGTTAAATTTGCTCTGTAAGGGCACTACCAGAGGCTACGTTTCCGGTTCGTCATTCTCTCGCTTTTATAATACAGCAATCTGTTGA

Protein sequence

MAHTCSSVAYSLSLSTSTSINNSSIFLSPPSTMAGLYGLHPLAGNSHYSSSTTTLETLAIPMASADYSHPLPDFESEHFLPFSSATCNATLVAEEIKTACANSEEESAGVIRAKIASHPLYPKLVDAFLNCQKVGAPPEVAKILDQCNRGNNISKETPGVSTCLGTDPELDEFMGIFCGLLAKYELDLYQPLEEASSFLKNMGRQLNLLCKGTTRGYVSGSSFSRFYNTAIC

Homology

[Close]

BLAST of PI0009516 vs. ExPASy Swiss-Prot
Match: Q84JS6 (Homeobox protein knotted-1-like 6 OS=Arabidopsis thaliana OX=3702 GN=KNAT6 PE=1 SV=1)

HSP 1 Score: 125.9 bits (315), Expect = 5.8e-28
Identity = 73/189 (38.62%), Postives = 106/189 (56.08%), Query Frame = 0


Query: 33  MAGLYGLHPLAGNSHYSSSTTTLETLAIP-------MASADYSHPLPDFESEHFL--PFS 92
           M G+Y  H     S  S    + E+L  P        +SA  +     F S+  L    S
Sbjct: 1   MDGMYNFHSAGDYSDKSVLMMSPESLMFPSDYQALLCSSAGENRVSDVFGSDELLSVAVS 60

Query: 93  SATCNATLVAEEIKTACANSEEESAGVIRAKIASHPLYPKLVDAFLNCQKVGAPPEVAKI 152
           + +  A  +A EI+    N +  S  VI+AKIA HP YP+L+ A+++CQKVGAPPE+A +
Sbjct: 61  ALSSEAASIAPEIR---RNDDNVSLTVIKAKIACHPSYPRLLQAYIDCQKVGAPPEIACL 120

Query: 153 LDQCNRGNNISKETPGVSTCLGTDPELDEFMGIFCGLLAKYELDLYQPLEEASSFLKNMG 212
           L++  R +++ K+    S+C G DPELDEFM  +C +L KY+ DL +P +EA+ FL  + 
Sbjct: 121 LEEIQRESDVYKQEVVPSSCFGADPELDEFMETYCDILVKYKSDLARPFDEATCFLNKIE 180

[Close]

BLAST of PI0009516 vs. ExPASy Swiss-Prot
Match: P46640 (Homeobox protein knotted-1-like 2 OS=Arabidopsis thaliana OX=3702 GN=KNAT2 PE=1 SV=3)

HSP 1 Score: 118.6 bits (296), Expect = 9.2e-26
Identity = 62/162 (38.27%), Postives = 91/162 (56.17%), Query Frame = 0


Query: 51  STTTLETLAIPMASADYSHPLPDFESEHFLPFSSATCNATLVAEEIKTACANSEEESAGV 110
           ST      A  M  +DY   +     ++   F S      L +E +       +  S  V
Sbjct: 9   STEDYSEKATLMMPSDYQSLICSTTGDNQRLFGSDELATALSSELLPRIRKAEDNFSLSV 68

Query: 111 IRAKIASHPLYPKLVDAFLNCQKVGAPPEVAKILDQCNRGNNISKETPGVSTCLGTDPEL 170
           I++KIASHPLYP+L+  +++CQKVGAP E+A IL++  R N++ K      +C G DPEL
Sbjct: 69  IKSKIASHPLYPRLLQTYIDCQKVGAPMEIACILEEIQRENHVYKRDVAPLSCFGADPEL 128

Query: 171 DEFMGIFCGLLAKYELDLYQPLEEASSFLKNMGRQLNLLCKG 213
           DEFM  +C +L KY+ DL +P +EA++F+  +  QL  LC G
Sbjct: 129 DEFMETYCDILVKYKTDLARPFDEATTFINKIEMQLQNLCTG 170

[Close]

BLAST of PI0009516 vs. ExPASy Swiss-Prot
Match: Q9FP29 (Homeobox protein knotted-1-like 1 OS=Oryza sativa subsp. japonica OX=39947 GN=OSH6 PE=2 SV=1)

HSP 1 Score: 102.1 bits (253), Expect = 8.9e-21
Identity = 48/113 (42.48%), Postives = 72/113 (63.72%), Query Frame = 0


Query: 102 NSEEESAGVIRAKIASHPLYPKLVDAFLNCQKVGAPPEVAKILDQCNRGNNISKETPGVS 161
           +S  +   +++A+IA HP YP L+ A++ C+KVGAPPEVA +L +  R         G  
Sbjct: 34  SSSSDLTELMKAQIAGHPRYPTLLSAYIECRKVGAPPEVASLLKEIGRERRAGGGGGGAG 93

Query: 162 TCLGTDPELDEFMGIFCGLLAKYELDLYQPLEEASSFLKNMGRQLNLLCKGTT 215
             +G DPELDEFM  +C +L +Y+ +L +P +EA+SFL ++  QL+ LC G T
Sbjct: 94  Q-IGVDPELDEFMEAYCRVLVRYKEELSRPFDEAASFLSSIQTQLSNLCSGAT 145

[Close]

BLAST of PI0009516 vs. ExPASy Swiss-Prot
Match: Q38874 (Homeobox protein SHOOT MERISTEMLESS OS=Arabidopsis thaliana OX=3702 GN=STM PE=1 SV=2)

HSP 1 Score: 98.2 bits (243), Expect = 1.3e-19
Identity = 52/129 (40.31%), Postives = 76/129 (58.91%), Query Frame = 0


Query: 103 SEEESAGVIRAKIASHPLYPKLVDAFLNCQKVGAPPEVAKILDQCNRGNNISKETPGVST 162
           S   S+  ++AKI +HP Y +L+ A++NCQKVGAPPEV   L++       +  + G + 
Sbjct: 113 SSSSSSASVKAKIMAHPHYHRLLAAYVNCQKVGAPPEVVARLEEACSSAAAAAASMGPTG 172

Query: 163 CLGTDPELDEFMGIFCGLLAKYELDLYQPLEEASSFLKNMGRQLNLLCKGTTRGYVSGSS 222
           CLG DP LD+FM  +C +L KYE +L +P +EA  FL+ +       C+  +    S SS
Sbjct: 173 CLGEDPGLDQFMEAYCEMLVKYEQELSKPFKEAMVFLQRVE------CQFKSLSLSSPSS 232

Query: 223 FSRFYNTAI 232
           FS +  TAI
Sbjct: 233 FSGYGETAI 235

[Close]

BLAST of PI0009516 vs. ExPASy Swiss-Prot
Match: A2Y007 (Homeobox protein knotted-1-like 10 OS=Oryza sativa subsp. indica OX=39946 GN=OSH71 PE=2 SV=2)

HSP 1 Score: 94.7 bits (234), Expect = 1.4e-18
Identity = 44/103 (42.72%), Postives = 65/103 (63.11%), Query Frame = 0


Query: 110 VIRAKIASHPLYPKLVDAFLNCQKVGAPPEVAKILDQCNRGNNISKETPGVSTCLGTDPE 169
           +++A+IA HP YP L+ A++ C+KVGAPPEV  +L++  R              +G DPE
Sbjct: 54  LMKAQIAGHPSYPSLLSAYIECRKVGAPPEVTTLLEEIGREGRGGGGGATAGGEIGLDPE 113

Query: 170 LDEFMGIFCGLLAKYELDLYQPLEEASSFLKNMGRQLNLLCKG 213
           LDEFM  +C +L +Y+ +L +P +EA+SFL  +  QL  LC G
Sbjct: 114 LDEFMETYCRVLERYKEELTRPFDEAASFLTGIHTQLASLCGG 156

[Close]

BLAST of PI0009516 vs. ExPASy TrEMBL
Match: A0A1S3CLY2 (homeobox protein knotted-1-like 2 OS=Cucumis melo OX=3656 GN=LOC103502408 PE=4 SV=1)

HSP 1 Score: 349.4 bits (895), Expect = 1.2e-92
Identity = 187/226 (82.74%), Postives = 195/226 (86.28%), Query Frame = 0


Query: 1   MAHTCSSVAYSLSLSTSTSINNSSIFLSPPSTMAGLYGLHPLAGNSHYSSSTTTLETLAI 60
           MA+T SS  YSL LSTSTS+NNSSIFLSPPSTMAGLYGLHPLA NS++SSSTTTLETL I
Sbjct: 1   MAYTHSSAPYSLPLSTSTSLNNSSIFLSPPSTMAGLYGLHPLAANSYHSSSTTTLETLPI 60

Query: 61  PMASADYSHPLPDFESEHFLPFSSATCNATLVAEEIKTACANSEEESAGVIRAKIASHPL 120
           P  SADYSHPLPDFE+EH  PFSS   + T +  E KTACA  EEESAGVIRAKIASHPL
Sbjct: 61  PTHSADYSHPLPDFEAEHSRPFSS-VASKTAITAETKTACAIPEEESAGVIRAKIASHPL 120

Query: 121 YPKLVDAFLNCQKVGAPPEVAKILDQCNRGNN-ISKETPGVSTCLGTDPELDEFMGIFCG 180
           YPKLVDAFLNCQKVGAPPEVAKILDQCNRGNN I KE P VSTCLGTDPELDEFM I CG
Sbjct: 121 YPKLVDAFLNCQKVGAPPEVAKILDQCNRGNNIIGKENPCVSTCLGTDPELDEFMRIICG 180

Query: 181 LLAKYELDLYQPLEEASSFLKNMGRQLNLLCKGTTRGYV-SGSSFS 225
           LLAKYELDL QPLEEASSFLKNM  QLNLLC+GT RGYV SGSSFS
Sbjct: 181 LLAKYELDLCQPLEEASSFLKNMEMQLNLLCEGTNRGYVSSGSSFS 225

[Close]

BLAST of PI0009516 vs. ExPASy TrEMBL
Match: A0A0A0LU96 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G004870 PE=3 SV=1)

HSP 1 Score: 314.7 bits (805), Expect = 3.2e-82
Identity = 159/187 (85.03%), Postives = 167/187 (89.30%), Query Frame = 0


Query: 33  MAGLYGLHPLAGNSHYSSSTTTLETLAIPMASADYSHPLPDFESEHFLPFSSATCNATLV 92
           MAGLY L+ LA NSH+SSSTTTLETLAI MAS+DYSH L DFESEHFLPFSSA  N  +V
Sbjct: 1   MAGLYSLNLLASNSHHSSSTTTLETLAIRMASSDYSHSLTDFESEHFLPFSSAASNTAIV 60

Query: 93  AEEIKTACANSEEESAGVIRAKIASHPLYPKLVDAFLNCQKVGAPPEVAKILDQCNRGNN 152
           AE++KTACA SEEESAGVIRAKIASHPLYPKLVDAFLNCQKV APPEVAKILDQ NRGNN
Sbjct: 61  AEKMKTACAISEEESAGVIRAKIASHPLYPKLVDAFLNCQKVSAPPEVAKILDQYNRGNN 120

Query: 153 ISKETPGVSTCLGTDPELDEFMGIFCGLLAKYELDLYQPLEEASSFLKNMGRQLNLLCKG 212
           I  E PGVSTCLGTDPELDEFM IFC LLAKYELDLYQPLEEAS+FLKNM RQLNLLC+ 
Sbjct: 121 IGNENPGVSTCLGTDPELDEFMEIFCELLAKYELDLYQPLEEASAFLKNMERQLNLLCED 180

Query: 213 TTRGYVS 220
           TTRGYVS
Sbjct: 181 TTRGYVS 187

[Close]

BLAST of PI0009516 vs. ExPASy TrEMBL
Match: A0A5A7URR0 (Homeobox protein knotted-1-like 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold350G001370 PE=4 SV=1)

HSP 1 Score: 307.8 bits (787), Expect = 4.0e-80
Identity = 161/194 (82.99%), Postives = 167/194 (86.08%), Query Frame = 0


Query: 33  MAGLYGLHPLAGNSHYSSSTTTLETLAIPMASADYSHPLPDFESEHFLPFSSATCNATLV 92
           MAGLYGLHPLA NS++SSSTTTLETL IP  SADYSHPLPDFE+EH  PFSS   + T +
Sbjct: 1   MAGLYGLHPLAANSYHSSSTTTLETLPIPTHSADYSHPLPDFEAEHSRPFSS-VASKTAI 60

Query: 93  AEEIKTACANSEEESAGVIRAKIASHPLYPKLVDAFLNCQKVGAPPEVAKILDQCNRGNN 152
             E KTACA  EEESAGVIRAKIASHPLYPKLVDAFLNCQKVGAPPEVAKILDQCNRGNN
Sbjct: 61  TAETKTACAIPEEESAGVIRAKIASHPLYPKLVDAFLNCQKVGAPPEVAKILDQCNRGNN 120

Query: 153 -ISKETPGVSTCLGTDPELDEFMGIFCGLLAKYELDLYQPLEEASSFLKNMGRQLNLLCK 212
            I KE P VSTCLGTDPELDEFM I CGLLAKYELDL QPLEEASSFLKNM  QLNLLC+
Sbjct: 121 IIGKENPCVSTCLGTDPELDEFMRIICGLLAKYELDLCQPLEEASSFLKNMEMQLNLLCE 180

Query: 213 GTTRGYV-SGSSFS 225
           GT RGYV SGSSFS
Sbjct: 181 GTNRGYVSSGSSFS 193

[Close]

BLAST of PI0009516 vs. ExPASy TrEMBL
Match: A0A6J1EK44 (homeobox protein knotted-1-like 6 OS=Cucurbita moschata OX=3662 GN=LOC111435282 PE=3 SV=1)

HSP 1 Score: 212.2 bits (539), Expect = 2.3e-51
Identity = 117/194 (60.31%), Postives = 134/194 (69.07%), Query Frame = 0


Query: 33  MAGLYGLHPLAGNSHYSSSTTTLETLAIPM-------ASADYSHPLPDFESEHFLPFSSA 92
           MA LYGLHPLA  S+ SSS   L+ L +P+       AS+DYSHPL  F S H    SS 
Sbjct: 1   MADLYGLHPLADYSYESSSAAPLDNLLVPVNYQAYSTASSDYSHPLQVFGSGHVPSVSSG 60

Query: 93  TCNATLVAEEIKTACANSEEESAGVIRAKIASHPLYPKLVDAFLNCQKVGAPPEVAKILD 152
             +A LVA         SEEESAG IR KIASHPLYP+LVDAF++CQK+GAPPEVA IL 
Sbjct: 61  DYDAALVA-------VVSEEESAGAIREKIASHPLYPRLVDAFVDCQKIGAPPEVANILG 120

Query: 153 QCNRGNNISKETPGVSTCLGTDPELDEFMGIFCGLLAKYELDLYQPLEEASSFLKNMGRQ 212
           +  RG++I + T  VST LG DPELDEFM  +CG+LAKY+LDL  P  EASSFL NM  Q
Sbjct: 121 RSLRGSDIGERTSSVSTRLGADPELDEFMETYCGILAKYKLDLSLPFVEASSFLNNMETQ 180

Query: 213 LNLLCKGTTRGYVS 220
           LN LC GTTRGYVS
Sbjct: 181 LNRLCNGTTRGYVS 187

[Close]

BLAST of PI0009516 vs. ExPASy TrEMBL
Match: A0A6J1KV29 (homeobox protein knotted-1-like 6 OS=Cucurbita maxima OX=3661 GN=LOC111497855 PE=3 SV=1)

HSP 1 Score: 211.1 bits (536), Expect = 5.0e-51
Identity = 116/194 (59.79%), Postives = 132/194 (68.04%), Query Frame = 0


Query: 33  MAGLYGLHPLAGNSHYSSSTTTLETLAIPM-------ASADYSHPLPDFESEHFLPFSSA 92
           MA LYGLHPLA  S+ SSS   L+ L +P+       ASADYSH L  F S H    SS 
Sbjct: 1   MADLYGLHPLADYSYESSSAAPLDNLLVPVNFQAYSTASADYSHWLQVFGSGHVPSVSSG 60

Query: 93  TCNATLVAEEIKTACANSEEESAGVIRAKIASHPLYPKLVDAFLNCQKVGAPPEVAKILD 152
             +A L           SEEESAG IR KIASHPLYP+LVDAF++CQK+GAPPEVA IL 
Sbjct: 61  DYDAALAVV--------SEEESAGAIREKIASHPLYPRLVDAFVDCQKIGAPPEVANILG 120

Query: 153 QCNRGNNISKETPGVSTCLGTDPELDEFMGIFCGLLAKYELDLYQPLEEASSFLKNMGRQ 212
           +  RG +I + T GVSTCLG DPELDEFM  +CG+LAKY+LDL  P  EASSFL NM  Q
Sbjct: 121 RSVRGRDIGERTSGVSTCLGADPELDEFMETYCGILAKYKLDLSLPFVEASSFLNNMETQ 180

Query: 213 LNLLCKGTTRGYVS 220
           L+ LC GTTRGYVS
Sbjct: 181 LSSLCNGTTRGYVS 186

[Close]

BLAST of PI0009516 vs. NCBI nr
Match: XP_008464567.1 (PREDICTED: homeobox protein knotted-1-like 2 [Cucumis melo])

HSP 1 Score: 349.4 bits (895), Expect = 2.4e-92
Identity = 187/226 (82.74%), Postives = 195/226 (86.28%), Query Frame = 0


Query: 1   MAHTCSSVAYSLSLSTSTSINNSSIFLSPPSTMAGLYGLHPLAGNSHYSSSTTTLETLAI 60
           MA+T SS  YSL LSTSTS+NNSSIFLSPPSTMAGLYGLHPLA NS++SSSTTTLETL I
Sbjct: 1   MAYTHSSAPYSLPLSTSTSLNNSSIFLSPPSTMAGLYGLHPLAANSYHSSSTTTLETLPI 60

Query: 61  PMASADYSHPLPDFESEHFLPFSSATCNATLVAEEIKTACANSEEESAGVIRAKIASHPL 120
           P  SADYSHPLPDFE+EH  PFSS   + T +  E KTACA  EEESAGVIRAKIASHPL
Sbjct: 61  PTHSADYSHPLPDFEAEHSRPFSS-VASKTAITAETKTACAIPEEESAGVIRAKIASHPL 120

Query: 121 YPKLVDAFLNCQKVGAPPEVAKILDQCNRGNN-ISKETPGVSTCLGTDPELDEFMGIFCG 180
           YPKLVDAFLNCQKVGAPPEVAKILDQCNRGNN I KE P VSTCLGTDPELDEFM I CG
Sbjct: 121 YPKLVDAFLNCQKVGAPPEVAKILDQCNRGNNIIGKENPCVSTCLGTDPELDEFMRIICG 180

Query: 181 LLAKYELDLYQPLEEASSFLKNMGRQLNLLCKGTTRGYV-SGSSFS 225
           LLAKYELDL QPLEEASSFLKNM  QLNLLC+GT RGYV SGSSFS
Sbjct: 181 LLAKYELDLCQPLEEASSFLKNMEMQLNLLCEGTNRGYVSSGSSFS 225

[Close]

BLAST of PI0009516 vs. NCBI nr
Match: XP_004138104.1 (homeobox protein knotted-1-like 2 isoform X2 [Cucumis sativus])

HSP 1 Score: 314.7 bits (805), Expect = 6.7e-82
Identity = 159/187 (85.03%), Postives = 167/187 (89.30%), Query Frame = 0


Query: 33  MAGLYGLHPLAGNSHYSSSTTTLETLAIPMASADYSHPLPDFESEHFLPFSSATCNATLV 92
           MAGLY L+ LA NSH+SSSTTTLETLAI MAS+DYSH L DFESEHFLPFSSA  N  +V
Sbjct: 1   MAGLYSLNLLASNSHHSSSTTTLETLAIRMASSDYSHSLTDFESEHFLPFSSAASNTAIV 60

Query: 93  AEEIKTACANSEEESAGVIRAKIASHPLYPKLVDAFLNCQKVGAPPEVAKILDQCNRGNN 152
           AE++KTACA SEEESAGVIRAKIASHPLYPKLVDAFLNCQKV APPEVAKILDQ NRGNN
Sbjct: 61  AEKMKTACAISEEESAGVIRAKIASHPLYPKLVDAFLNCQKVSAPPEVAKILDQYNRGNN 120

Query: 153 ISKETPGVSTCLGTDPELDEFMGIFCGLLAKYELDLYQPLEEASSFLKNMGRQLNLLCKG 212
           I  E PGVSTCLGTDPELDEFM IFC LLAKYELDLYQPLEEAS+FLKNM RQLNLLC+ 
Sbjct: 121 IGNENPGVSTCLGTDPELDEFMEIFCELLAKYELDLYQPLEEASAFLKNMERQLNLLCED 180

Query: 213 TTRGYVS 220
           TTRGYVS
Sbjct: 181 TTRGYVS 187

[Close]

BLAST of PI0009516 vs. NCBI nr
Match: XP_011656609.1 (homeobox protein knotted-1-like 2 isoform X1 [Cucumis sativus])

HSP 1 Score: 314.7 bits (805), Expect = 6.7e-82
Identity = 159/190 (83.68%), Postives = 168/190 (88.42%), Query Frame = 0


Query: 33  MAGLYGLHPLAGNSHYSSSTTTLETLAIPMASADYSHPLPDFESEHFLPFSSATCNATLV 92
           MAGLY L+ LA NSH+SSSTTTLETLAI MAS+DYSH L DFESEHFLPFSSA  N  +V
Sbjct: 1   MAGLYSLNLLASNSHHSSSTTTLETLAIRMASSDYSHSLTDFESEHFLPFSSAASNTAIV 60

Query: 93  AEEIKTACANSEEESAGVIRAKIASHPLYPKLVDAFLNCQKVGAPPEVAKILDQCNRGNN 152
           AE++KTACA SEEESAGVIRAKIASHPLYPKLVDAFLNCQKV APPEVAKILDQ NRGNN
Sbjct: 61  AEKMKTACAISEEESAGVIRAKIASHPLYPKLVDAFLNCQKVSAPPEVAKILDQYNRGNN 120

Query: 153 ISKETPGVSTCLGTDPELDEFMGIFCGLLAKYELDLYQPLEEASSFLKNMGRQLNLLCKG 212
           I  E PGVSTCLGTDPELDEFM IFC LLAKYELDLYQPLEEAS+FLKNM RQLNLLC+ 
Sbjct: 121 IGNENPGVSTCLGTDPELDEFMEIFCELLAKYELDLYQPLEEASAFLKNMERQLNLLCED 180

Query: 213 TTRGYVSGSS 223
           TTRGYVS  +
Sbjct: 181 TTRGYVSADN 190

[Close]

BLAST of PI0009516 vs. NCBI nr
Match: KGN63576.2 (hypothetical protein Csa_014294 [Cucumis sativus])

HSP 1 Score: 314.7 bits (805), Expect = 6.7e-82
Identity = 159/187 (85.03%), Postives = 167/187 (89.30%), Query Frame = 0


Query: 33  MAGLYGLHPLAGNSHYSSSTTTLETLAIPMASADYSHPLPDFESEHFLPFSSATCNATLV 92
           MAGLY L+ LA NSH+SSSTTTLETLAI MAS+DYSH L DFESEHFLPFSSA  N  +V
Sbjct: 1   MAGLYSLNLLASNSHHSSSTTTLETLAIRMASSDYSHSLTDFESEHFLPFSSAASNTAIV 60

Query: 93  AEEIKTACANSEEESAGVIRAKIASHPLYPKLVDAFLNCQKVGAPPEVAKILDQCNRGNN 152
           AE++KTACA SEEESAGVIRAKIASHPLYPKLVDAFLNCQKV APPEVAKILDQ NRGNN
Sbjct: 61  AEKMKTACAISEEESAGVIRAKIASHPLYPKLVDAFLNCQKVSAPPEVAKILDQYNRGNN 120

Query: 153 ISKETPGVSTCLGTDPELDEFMGIFCGLLAKYELDLYQPLEEASSFLKNMGRQLNLLCKG 212
           I  E PGVSTCLGTDPELDEFM IFC LLAKYELDLYQPLEEAS+FLKNM RQLNLLC+ 
Sbjct: 121 IGNENPGVSTCLGTDPELDEFMEIFCELLAKYELDLYQPLEEASAFLKNMERQLNLLCED 180

Query: 213 TTRGYVS 220
           TTRGYVS
Sbjct: 181 TTRGYVS 187

[Close]

BLAST of PI0009516 vs. NCBI nr
Match: XP_011656688.1 (homeobox protein knotted-1-like 2 isoform X3 [Cucumis sativus])

HSP 1 Score: 314.7 bits (805), Expect = 6.7e-82
Identity = 159/190 (83.68%), Postives = 168/190 (88.42%), Query Frame = 0


Query: 33  MAGLYGLHPLAGNSHYSSSTTTLETLAIPMASADYSHPLPDFESEHFLPFSSATCNATLV 92
           MAGLY L+ LA NSH+SSSTTTLETLAI MAS+DYSH L DFESEHFLPFSSA  N  +V
Sbjct: 1   MAGLYSLNLLASNSHHSSSTTTLETLAIRMASSDYSHSLTDFESEHFLPFSSAASNTAIV 60

Query: 93  AEEIKTACANSEEESAGVIRAKIASHPLYPKLVDAFLNCQKVGAPPEVAKILDQCNRGNN 152
           AE++KTACA SEEESAGVIRAKIASHPLYPKLVDAFLNCQKV APPEVAKILDQ NRGNN
Sbjct: 61  AEKMKTACAISEEESAGVIRAKIASHPLYPKLVDAFLNCQKVSAPPEVAKILDQYNRGNN 120

Query: 153 ISKETPGVSTCLGTDPELDEFMGIFCGLLAKYELDLYQPLEEASSFLKNMGRQLNLLCKG 212
           I  E PGVSTCLGTDPELDEFM IFC LLAKYELDLYQPLEEAS+FLKNM RQLNLLC+ 
Sbjct: 121 IGNENPGVSTCLGTDPELDEFMEIFCELLAKYELDLYQPLEEASAFLKNMERQLNLLCED 180

Query: 213 TTRGYVSGSS 223
           TTRGYVS  +
Sbjct: 181 TTRGYVSADN 190

[Close]

BLAST of PI0009516 vs. TAIR 10
Match: AT1G23380.1 (KNOTTED1-like homeobox gene 6 )

HSP 1 Score: 125.9 bits (315), Expect = 4.1e-29
Identity = 73/189 (38.62%), Postives = 106/189 (56.08%), Query Frame = 0


Query: 33  MAGLYGLHPLAGNSHYSSSTTTLETLAIP-------MASADYSHPLPDFESEHFL--PFS 92
           M G+Y  H     S  S    + E+L  P        +SA  +     F S+  L    S
Sbjct: 1   MDGMYNFHSAGDYSDKSVLMMSPESLMFPSDYQALLCSSAGENRVSDVFGSDELLSVAVS 60

Query: 93  SATCNATLVAEEIKTACANSEEESAGVIRAKIASHPLYPKLVDAFLNCQKVGAPPEVAKI 152
           + +  A  +A EI+    N +  S  VI+AKIA HP YP+L+ A+++CQKVGAPPE+A +
Sbjct: 61  ALSSEAASIAPEIR---RNDDNVSLTVIKAKIACHPSYPRLLQAYIDCQKVGAPPEIACL 120

Query: 153 LDQCNRGNNISKETPGVSTCLGTDPELDEFMGIFCGLLAKYELDLYQPLEEASSFLKNMG 212
           L++  R +++ K+    S+C G DPELDEFM  +C +L KY+ DL +P +EA+ FL  + 
Sbjct: 121 LEEIQRESDVYKQEVVPSSCFGADPELDEFMETYCDILVKYKSDLARPFDEATCFLNKIE 180

[Close]

BLAST of PI0009516 vs. TAIR 10
Match: AT1G23380.2 (KNOTTED1-like homeobox gene 6 )

HSP 1 Score: 120.9 bits (302), Expect = 1.3e-27
Identity = 73/191 (38.22%), Postives = 106/191 (55.50%), Query Frame = 0


Query: 33  MAGLYGLHPLAGNSHYSSSTTTLETLAIP-------MASADYSHPLPDFESEHFL--PFS 92
           M G+Y  H     S  S    + E+L  P        +SA  +     F S+  L    S
Sbjct: 1   MDGMYNFHSAGDYSDKSVLMMSPESLMFPSDYQALLCSSAGENRVSDVFGSDELLSVAVS 60

Query: 93  SATCNATLVAEEIKTACANSEEESAGVIRAKIASHPLYPKLVDAFLNCQK--VGAPPEVA 152
           + +  A  +A EI+    N +  S  VI+AKIA HP YP+L+ A+++CQK  VGAPPE+A
Sbjct: 61  ALSSEAASIAPEIR---RNDDNVSLTVIKAKIACHPSYPRLLQAYIDCQKKQVGAPPEIA 120

Query: 153 KILDQCNRGNNISKETPGVSTCLGTDPELDEFMGIFCGLLAKYELDLYQPLEEASSFLKN 212
            +L++  R +++ K+    S+C G DPELDEFM  +C +L KY+ DL +P +EA+ FL  
Sbjct: 121 CLLEEIQRESDVYKQEVVPSSCFGADPELDEFMETYCDILVKYKSDLARPFDEATCFLNK 180

[Close]

BLAST of PI0009516 vs. TAIR 10
Match: AT1G70510.1 (KNOTTED-like from Arabidopsis thaliana 2 )

HSP 1 Score: 118.6 bits (296), Expect = 6.5e-27
Identity = 62/162 (38.27%), Postives = 91/162 (56.17%), Query Frame = 0


Query: 51  STTTLETLAIPMASADYSHPLPDFESEHFLPFSSATCNATLVAEEIKTACANSEEESAGV 110
           ST      A  M  +DY   +     ++   F S      L +E +       +  S  V
Sbjct: 9   STEDYSEKATLMMPSDYQSLICSTTGDNQRLFGSDELATALSSELLPRIRKAEDNFSLSV 68

Query: 111 IRAKIASHPLYPKLVDAFLNCQKVGAPPEVAKILDQCNRGNNISKETPGVSTCLGTDPEL 170
           I++KIASHPLYP+L+  +++CQKVGAP E+A IL++  R N++ K      +C G DPEL
Sbjct: 69  IKSKIASHPLYPRLLQTYIDCQKVGAPMEIACILEEIQRENHVYKRDVAPLSCFGADPEL 128

Query: 171 DEFMGIFCGLLAKYELDLYQPLEEASSFLKNMGRQLNLLCKG 213
           DEFM  +C +L KY+ DL +P +EA++F+  +  QL  LC G
Sbjct: 129 DEFMETYCDILVKYKTDLARPFDEATTFINKIEMQLQNLCTG 170

[Close]

BLAST of PI0009516 vs. TAIR 10
Match: AT1G62360.1 (KNOX/ELK homeobox transcription factor )

HSP 1 Score: 98.2 bits (243), Expect = 9.2e-21
Identity = 52/129 (40.31%), Postives = 76/129 (58.91%), Query Frame = 0


Query: 103 SEEESAGVIRAKIASHPLYPKLVDAFLNCQKVGAPPEVAKILDQCNRGNNISKETPGVST 162
           S   S+  ++AKI +HP Y +L+ A++NCQKVGAPPEV   L++       +  + G + 
Sbjct: 113 SSSSSSASVKAKIMAHPHYHRLLAAYVNCQKVGAPPEVVARLEEACSSAAAAAASMGPTG 172

Query: 163 CLGTDPELDEFMGIFCGLLAKYELDLYQPLEEASSFLKNMGRQLNLLCKGTTRGYVSGSS 222
           CLG DP LD+FM  +C +L KYE +L +P +EA  FL+ +       C+  +    S SS
Sbjct: 173 CLGEDPGLDQFMEAYCEMLVKYEQELSKPFKEAMVFLQRVE------CQFKSLSLSSPSS 232

Query: 223 FSRFYNTAI 232
           FS +  TAI
Sbjct: 233 FSGYGETAI 235

[Close]

BLAST of PI0009516 vs. TAIR 10
Match: AT4G08150.1 (KNOTTED-like from Arabidopsis thaliana )

HSP 1 Score: 88.6 bits (218), Expect = 7.3e-18
Identity = 42/112 (37.50%), Postives = 66/112 (58.93%), Query Frame = 0


Query: 102 NSEEESAGVIRAKIASHPLYPKLVDAFLNCQKVGAPPEVAKILDQCNRGNNI--SKETPG 161
           N        ++AKI +HP Y  L+ A+L+CQK+GAPP+V   +    +       + TP 
Sbjct: 125 NDNVSDVEAMKAKIIAHPHYSTLLQAYLDCQKIGAPPDVVDRITAARQDFEARQQRSTPS 184

Query: 162 VSTCLGTDPELDEFMGIFCGLLAKYELDLYQPLEEASSFLKNMGRQLNLLCK 212
           VS     DPELD+FM  +C +L KY  +L +P++EA  F++ +  QL++LC+
Sbjct: 185 VSAS-SRDPELDQFMEAYCDMLVKYREELTRPIQEAMEFIRRIESQLSMLCQ 235

The following BLAST results are available for this feature:

BLAST of PI0009516 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q84JS6	5.8e-28	38.62	Homeobox protein knotted-1-like 6 OS=Arabidopsis thaliana OX=3702 GN=KNAT6 PE=1 ...	[more]
P46640	9.2e-26	38.27	Homeobox protein knotted-1-like 2 OS=Arabidopsis thaliana OX=3702 GN=KNAT2 PE=1 ...	[more]
Q9FP29	8.9e-21	42.48	Homeobox protein knotted-1-like 1 OS=Oryza sativa subsp. japonica OX=39947 GN=OS...	[more]
Q38874	1.3e-19	40.31	Homeobox protein SHOOT MERISTEMLESS OS=Arabidopsis thaliana OX=3702 GN=STM PE=1 ...	[more]
A2Y007	1.4e-18	42.72	Homeobox protein knotted-1-like 10 OS=Oryza sativa subsp. indica OX=39946 GN=OSH...	[more]

BLAST of PI0009516 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3CLY2	1.2e-92	82.74	homeobox protein knotted-1-like 2 OS=Cucumis melo OX=3656 GN=LOC103502408 PE=4 S...	[more]
A0A0A0LU96	3.2e-82	85.03	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G004870 PE=3 SV=1	[more]
A0A5A7URR0	4.0e-80	82.99	Homeobox protein knotted-1-like 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A6J1EK44	2.3e-51	60.31	homeobox protein knotted-1-like 6 OS=Cucurbita moschata OX=3662 GN=LOC111435282 ...	[more]
A0A6J1KV29	5.0e-51	59.79	homeobox protein knotted-1-like 6 OS=Cucurbita maxima OX=3661 GN=LOC111497855 PE...	[more]

BLAST of PI0009516 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008464567.1	2.4e-92	82.74	PREDICTED: homeobox protein knotted-1-like 2 [Cucumis melo]	[more]
XP_004138104.1	6.7e-82	85.03	homeobox protein knotted-1-like 2 isoform X2 [Cucumis sativus]	[more]
XP_011656609.1	6.7e-82	83.68	homeobox protein knotted-1-like 2 isoform X1 [Cucumis sativus]	[more]
KGN63576.2	6.7e-82	85.03	hypothetical protein Csa_014294 [Cucumis sativus]	[more]
XP_011656688.1	6.7e-82	83.68	homeobox protein knotted-1-like 2 isoform X3 [Cucumis sativus]	[more]

BLAST of PI0009516 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G23380.1	4.1e-29	38.62	KNOTTED1-like homeobox gene 6	[more]
AT1G23380.2	1.3e-27	38.22	KNOTTED1-like homeobox gene 6	[more]
AT1G70510.1	6.5e-27	38.27	KNOTTED-like from Arabidopsis thaliana 2	[more]
AT1G62360.1	9.2e-21	40.31	KNOX/ELK homeobox transcription factor	[more]
AT4G08150.1	7.3e-18	37.50	KNOTTED-like from Arabidopsis thaliana	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005541	KNOX2	SMART	SM01256	KNOX2_2	coord: 160..211 e-value: 1.3E-12 score: 57.9
IPR005541	KNOX2	PFAM	PF03791	KNOX2	coord: 164..210 e-value: 1.0E-16 score: 60.2
IPR005540	KNOX1	SMART	SM01255	KNOX1_2	coord: 109..153 e-value: 5.5E-16 score: 69.1
IPR005540	KNOX1	PFAM	PF03790	KNOX1	coord: 111..149 e-value: 1.3E-18 score: 66.5
None	No IPR available	PANTHER	PTHR11850:SF254	HOMEOBOX PROTEIN KNOTTED-1-LIKE 6	coord: 52..222
None	No IPR available	PANTHER	PTHR11850	HOMEOBOX PROTEIN TRANSCRIPTION FACTORS	coord: 52..222

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0009516.1	PI0009516.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006974	cellular response to DNA damage stimulus
biological_process	GO:0006468	protein phosphorylation
biological_process	GO:0006357	regulation of transcription by RNA polymerase II
cellular_component	GO:0005634	nucleus
molecular_function	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific
molecular_function	GO:0004674	protein serine/threonine kinase activity
molecular_function	GO:0000978	RNA polymerase II cis-regulatory region sequence-specific DNA binding
molecular_function	GO:0003677	DNA binding