PI0009317 (gene) Melon (PI 482460) v1

Overview
NamePI0009317
Typegene
OrganismCucumis metuliferus (Melon (PI 482460) v1)
DescriptionTr-type G domain-containing protein
Locationchr05: 1833684 .. 1834075 (+)
RNA-Seq ExpressionPI0009317
SyntenyPI0009317
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGATGGATAATTAGGATGAGGCCCATTTCTTCTCAGTCTAAAAGGCCCGATACTAAGATAGGTTATTGGGCCGATTCGTTCTTTTTGTAACCTCAAAACCCGACCCGATTTGGCATCCTATGCACGTGACAAATCAGGCCATACCCTAGCCAGGCCACTGTAAGCTTTTCATTTCGTCTCACCGGCGCCCTCGTCGCCGTGTTCCTTTTCTAGCACCACCACCGCCACAATTCCCGGCCATTTTCACTACTGATCGTCACCCTCCGTCACTCACGCACACACTCACACAGATTTCTCTACCGTCGTTGGCTGTCACTTGCCGCTTGTCGTCTCCCACAGTTGTCCATCACTGTCCGTCGAGGGGAGGGTATTTGAAACACTTGTTTTAG

mRNA sequence

ATGAGATGGATAATTAGGATGAGGCCCATTTCTTCTCAGTCTAAAAGGCCCGATACTAAGATAGGCCACTGTAAGCTTTTCATTTCGTCTCACCGGCGCCCTCGTCGCCGTGTTCCTTTTCTAGCACCACCACCGCCACAATTCCCGGCCATTTTCACTACTGATCGTCACCCTCCGTCACTCACGCACACACTCACACAGATTTCTCTACCGTCGTTGGCTGTCACTTGCCGCTTGTCGTCTCCCACAGTTGTCCATCACTGTCCGTCGAGGGGAGGGTATTTGAAACACTTGTTTTAG

Coding sequence (CDS)

ATGAGATGGATAATTAGGATGAGGCCCATTTCTTCTCAGTCTAAAAGGCCCGATACTAAGATAGGCCACTGTAAGCTTTTCATTTCGTCTCACCGGCGCCCTCGTCGCCGTGTTCCTTTTCTAGCACCACCACCGCCACAATTCCCGGCCATTTTCACTACTGATCGTCACCCTCCGTCACTCACGCACACACTCACACAGATTTCTCTACCGTCGTTGGCTGTCACTTGCCGCTTGTCGTCTCCCACAGTTGTCCATCACTGTCCGTCGAGGGGAGGGTATTTGAAACACTTGTTTTAG

Protein sequence

MRWIIRMRPISSQSKRPDTKIGHCKLFISSHRRPRRRVPFLAPPPPQFPAIFTTDRHPPSLTHTLTQISLPSLAVTCRLSSPTVVHHCPSRGGYLKHLF
Homology
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BLAST of PI0009317 vs. ExPASy TrEMBL
Match: A0A0A0LI82 (Tr-type G domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G009370 PE=3 SV=1)

HSP 1 Score: 83.6 bits (205), Expect = 5.2e-13
Identity = 49/95 (51.58%), Postives = 56/95 (58.95%), Query Frame = 0 

Query: 1  MRWIIRMRPISS----QSKRPDTKIGHCKLFISSHRRPRRRVPFLAPPPPQFPAIFTTDR 60
          M WI+ +  +       SKRPDTK+GHCKLFISSHRRP RRVP LAPP P FP IFTTD 
Sbjct: 1  MSWIVFLNGLGCGPFILSKRPDTKMGHCKLFISSHRRPHRRVPLLAPPLPPFPPIFTTDY 60

Query: 61 HPPSLT------HTLTQISLPSLAVTCRLSSPTVV 86
          H    T        L   S PSL+V  R+    V+
Sbjct: 61 HTAFSTVVGREFPLLVSHSCPSLSVEGRVFKTLVL 95

The following BLAST results are available for this feature:
BLAST of PI0009317 vs.
Match NameE-valueIdentityDescription
BLAST of PI0009317 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LI825.2e-1351.58Tr-type G domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G009370 P... [more]
BLAST of PI0009317 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
BLAST of PI0009317 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
PI0009317.1PI0009317.1mRNA