PI0009304 (gene) Melon (PI 482460) v1

Overview


Name	PI0009304
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Unknown protein
Location	chr11: 28490608 .. 28490984 (+)
RNA-Seq Expression	PI0009304
Synteny	PI0009304

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTGCAACCATGGACGATTACAGAGACACTAGATGGAAGCACAAGGTTGTATCTAAATTTGGATGATCAAGAAATGTTATCTGAAGCTCAGTTTCTTCTTTATTATTTTCAAGACCTACATGTGGAAGCAAGTATCACCATGTTTGATGTGGTTTCACAGCAAAGTTTTGAAGCAACCATGACAAGGCTAAGCGCTCCTAACCAATTTCTTATCAATTGGGGTTCCGACTTCGTCAACAACATAGATTATAAGAATGGAGATGAAATTTTGTTGCGTTGGGAACCTCGAAACAAACGTTTATGTTTTAGAACTAAAAATTTTCAGCTCTTAGAACTTATCCACAAATGTCTTATGGTCAATATCGTTCCTATTAA

mRNA sequence

ATGGTGCAACCATGGACGATTACAGAGACACTAGATGGAAGCACAAGGTTGTATCTAAATTTGGATGATCAAGAAATGTTATCTGAAGCTCAGTTTCTTCTTTATTATTTTCAAGACCTACATGTGGAAGCAAGTATCACCATGTTTGATGTGGTTTCACAGCAAAGTTTTGAAGCAACCATGACAAGGCTAAGCGCTCCTAACCAATTTCTTATCAATTGGGGTTCCGACTTCGTCAACAACATAGATTATAAGAATGGAGATGAAATTTTGTTGCGTTGGGAACCTCGAAACAAACCTCTTAGAACTTATCCACAAATGTCTTATGGTCAATATCGTTCCTATTAA

Coding sequence (CDS)

ATGGTGCAACCATGGACGATTACAGAGACACTAGATGGAAGCACAAGGTTGTATCTAAATTTGGATGATCAAGAAATGTTATCTGAAGCTCAGTTTCTTCTTTATTATTTTCAAGACCTACATGTGGAAGCAAGTATCACCATGTTTGATGTGGTTTCACAGCAAAGTTTTGAAGCAACCATGACAAGGCTAAGCGCTCCTAACCAATTTCTTATCAATTGGGGTTCCGACTTCGTCAACAACATAGATTATAAGAATGGAGATGAAATTTTGTTGCGTTGGGAACCTCGAAACAAACCTCTTAGAACTTATCCACAAATGTCTTATGGTCAATATCGTTCCTATTAA

Protein sequence

MVQPWTITETLDGSTRLYLNLDDQEMLSEAQFLLYYFQDLHVEASITMFDVVSQQSFEATMTRLSAPNQFLINWGSDFVNNIDYKNGDEILLRWEPRNKPLRTYPQMSYGQYRSY

Homology

[Close]

BLAST of PI0009304 vs. ExPASy TrEMBL
Match: A0A0A0LJ50 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G270130 PE=4 SV=1)

HSP 1 Score: 142.5 bits (358), Expect = 1.1e-30
Identity = 78/123 (63.41%), Postives = 88/123 (71.54%), Query Frame = 0


Query: 3   QPWTITETLDGSTRLYLNLDDQEMLSEAQFLLYYFQDLHVEASITMFDVVSQQSFEATMT 62
           +PW+ITETLDGS  L L LD  EML E+ FLL YF +   +A ITMFDVVS++SF+ATM 
Sbjct: 6   KPWSITETLDGSKELGLKLDAAEMLFESSFLLNYFPEQSGKAKITMFDVVSEKSFKATME 65

Query: 63  RLSAPNQFLINWGSDFVNNIDYKNGDEILLRWEPRNK----------PLRTYPQMSYGQY 116
           R SA NQFLI W  DFV NI+YKNGDEILL WEP+ K           LRTYPQMS GQY
Sbjct: 66  RKSASNQFLITWKKDFVKNINYKNGDEILLYWEPQIKSLCFEIVKCSALRTYPQMS-GQY 125

[Close]

BLAST of PI0009304 vs. ExPASy TrEMBL
Match: A0A0A0LD04 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G401960 PE=4 SV=1)

HSP 1 Score: 138.7 bits (348), Expect = 1.6e-29
Identity = 76/123 (61.79%), Postives = 87/123 (70.73%), Query Frame = 0


Query: 3   QPWTITETLDGSTRLYLNLDDQEMLSEAQFLLYYFQDLHVEASITMFDVVSQQSFEATMT 62
           +PW+ITETLDGS  L L LD  EML E+ FLL YF +   +A ITMFDVVS++SF+ATM 
Sbjct: 6   KPWSITETLDGSKELGLKLDAAEMLFESSFLLNYFPEQSGKAKITMFDVVSEKSFKATME 65

Query: 63  RLSAPNQFLINWGSDFVNNIDYKNGDEILLRWEPRNK----------PLRTYPQMSYGQY 116
           R SA NQFLI W  DFV NI+YK+GDEILL WEP+ K           LRTYPQMS GQY
Sbjct: 66  RKSASNQFLITWKKDFVKNINYKSGDEILLYWEPQIKSLCFEIVRCSALRTYPQMS-GQY 125

[Close]

BLAST of PI0009304 vs. NCBI nr
Match: KAE8651896.1 (hypothetical protein Csa_006487 [Cucumis sativus])

HSP 1 Score: 142.1 bits (357), Expect = 2.9e-30
Identity = 78/123 (63.41%), Postives = 88/123 (71.54%), Query Frame = 0


Query: 3   QPWTITETLDGSTRLYLNLDDQEMLSEAQFLLYYFQDLHVEASITMFDVVSQQSFEATMT 62
           +PW+ITETLDGS  L L LD  EML E+ FLL YF +   +A ITMFDVVS++SF+ATM 
Sbjct: 6   KPWSITETLDGSKELGLKLDAAEMLFESSFLLNYFPEQTGKAKITMFDVVSEKSFKATME 65

Query: 63  RLSAPNQFLINWGSDFVNNIDYKNGDEILLRWEPRNK----------PLRTYPQMSYGQY 116
           R SA NQFLI W  DFV NI+YKNGDEILL WEP+ K           LRTYPQMS GQY
Sbjct: 66  RKSASNQFLITWKKDFVKNINYKNGDEILLYWEPQIKSLCFEIVKCSALRTYPQMS-GQY 125

[Close]

BLAST of PI0009304 vs. NCBI nr
Match: KAE8651895.1 (hypothetical protein Csa_006112 [Cucumis sativus])

HSP 1 Score: 138.7 bits (348), Expect = 3.3e-29
Identity = 76/123 (61.79%), Postives = 87/123 (70.73%), Query Frame = 0


Query: 3   QPWTITETLDGSTRLYLNLDDQEMLSEAQFLLYYFQDLHVEASITMFDVVSQQSFEATMT 62
           +PW+ITETLDGS  L L LD  EML E+ FLL YF +   +A ITMFDVVS++SF+ATM 
Sbjct: 6   KPWSITETLDGSKELGLKLDAAEMLFESSFLLNYFPEQSGKAKITMFDVVSEKSFKATME 65

Query: 63  RLSAPNQFLINWGSDFVNNIDYKNGDEILLRWEPRNK----------PLRTYPQMSYGQY 116
           R SA NQFLI W  DFV NI+YK+GDEILL WEP+ K           LRTYPQMS GQY
Sbjct: 66  RKSASNQFLITWKKDFVKNINYKSGDEILLYWEPQIKSLCFEIVRCSALRTYPQMS-GQY 125

The following BLAST results are available for this feature:

BLAST of PI0009304 vs.


Match Name	E-value	Identity	Description

BLAST of PI0009304 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LJ50	1.1e-30	63.41	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G270130 PE=4 SV=1	[more]
A0A0A0LD04	1.6e-29	61.79	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G401960 PE=4 SV=1	[more]

BLAST of PI0009304 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8651896.1	2.9e-30	63.41	hypothetical protein Csa_006487 [Cucumis sativus]	[more]
KAE8651895.1	3.3e-29	61.79	hypothetical protein Csa_006112 [Cucumis sativus]	[more]

BLAST of PI0009304 vs. NCBI nr


Match Name	E-value	Identity	Description

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0009304.1	PI0009304.1	mRNA