
PI0009256 (gene) Melon (PI 482460) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CCGGGGTTTATAGAGGGTTTAGAGGAACCCGCGAAGTATCCTTTCTTCCAGCTCCCATCAATCAACCGACTACGCAAACACAATGCGTGGTAACAAGATTGCTCATACTTTGCTCCGTCGAGCTCGAATCGCCGCCGTTTCCTCTCCATTCTCCCCCGTCGGAGCACCGTCGTCCACAGTCTTTGCCTCCGAAGCAACATCTTTTCAAACTACTTGCTCCTCTTTCTCCTGTCGCGACCACGCATTCGCCTTTTCCCCAACCGCAACCCTGCGGTTGTTCAATACCAATTCCTCTAAACACTTTCAAGATGAACTGAAACAAGCAAATCCTCTCCAGTGTACGGAGTGTCTTCTTATTCCTGTGCAATCCGTCAATTTTTTCTTATTTTGAAGCTTCAATCGAGATTACTGTTTGGAATATGATTTATTAATGGCTTTGCGTAGTTGATTGATTAGTGATTTGGTAACTTTATGTTCGATTAGCTTTTCGAGCTGCAGATGGTGGTTTGTTGTTTTGTGGAATATCTGACTAAAGGCGGAGTATAATTCAGTCATATTCAGTTGTTTTGATTGTTGAACTACTTCTCTTGTTTGTAATATTTGACTAATTGCTTCAAGTGCCGATAACTGGTTATCGTTGTAGTGTTATTTATAAATTTTTTAAACGTAAAGTAGTGATGGTGTACTGTAGATTTGATGTGGAAGGTTCCCTTTGCTTCAGTGTACAGAGTTTTCTTCATTCTAATGATAATATCAGTGTGTTCATTGGTAGTTGTACATTTGTCGGTATTTACTCTCTTACAGCCATAATCGGCTATTGAAATTTATAATTTTTAATTGTTTAAGCCATGTCTAAAACTTGAGGTCTCAATCTTGGAAATCTCTTAACTTTTGTAGATGGGAGGGAAGATGAGGGAGAAACCACGGATGGATGGGAAGAAGACGATGATCTAGAGCCTGAGGTATTTTTATCTATTGAGCTGAGCTTTTATTCCACTATTTTTATAGGTGATGCTAATTTTTGTTGATAACATAGCTTGGTGATGGAGGGGATGGTGGTGGTGTTGTTTTAAAAGGCGTGCCATGGGGTGAGCATGTTCTTCTTCTTGCCCAAGAGGTCCTGCTGCAATTTGGGGATGACATAAAACTCTATTCTTTCAAGGCCACTCCACGTGGGTACATTTATGTCAGATTAGATAAACTCTCACACGAGTAATTTTCTTCTTTCTGTCTGTCCATATTTTTCTCACATAAGAGCTGTGGGTTTTACCTTCTAAGTTCTGGGGAATTTGATTTGCAATCACATTTTAAGCCCTTTTTGCGTGTGGGAGAGATTAGCAATCAACTCAAACCGTGTCTTATAATAAGAGGTGGAGAAAAAACTAAATCATATCAAACTCATCTGTCTCCTGGCTTTTGAATTTTATTTCATAGCCTTTATCTTTGTCACTATGAATTTGGCCGACTCTGATGGTTGTTGTCCCTAACTAGTTAGTATTGAAAATTTCTATTCTTTGATGAAAACCTATTTGTTTTTGTTTAAGTTATATCTTTGTTTCTGGATAGGAAATTTGTAGTCATGTAGTTGTGATGTAGTTGTGATGACATCATAACCATGAAAATAAGCTGGGATGGGCATTGCATCAGTTTGAATTTCATAATTAAGATTTATAGGCGGCTTTAACTTGGATTTAAATTTACAGTTTGTAAAATGTTGTTCTCTTCTTAGATTTGGTTGTCCCAGCCTGGAGGAGCTTGAAAGTTATAGCAAAGAGTACAAAAAAAGATTGGATGAAACTGGAGCTCTTGGAAATATTCCCGATGATTTAGCTCTTGAGGTAATAGCCGATAGACTTACCCTCCATCCCTACTGTACAAAAATGATTACTTATTTAGTTAGTTCACATTATTATGGCTACTTACATTAATACCTGAACGATCATGCTTTTGCTGTGAAGGTATCATCTCCAAGTGCAGAGAGATTACTGAAGGTTCCAGATGATCTATTTAGATTTAAAGCCATGCCAATGCGAGTTTCCTACATTGAGGATGCAGACTTGAGAGGCTCTGAAAATGATGGAGTTTTTATGCTGGATCATGTAGAATTGGAATCTGAGAGCTGTATCTGGAAATTGGCAAATGTGAGGGAAAACCGAGATCCGTTAAGTAAGGGTAGGCCTTTGACTCGTAAGCAGAAAGAATGGAGGTTAAAGTTACCCTATGCAAATCATAAGAAGGTATTCCTTTACCTTGAATGCTGAGAGTCAGCTCCTCAAGGTTCAAAAGAAAGGATGGGTTGTGTACTTAATTCATGAGGTTAGTGTTAGTTTTACGCAGGATTACTTTTATTTGAGGTCTTGGAGCTTTTCCACTTGGACACTTTCATCTGTTTGGAAAAGTTGTGTCCAGTTCAAGCATTATTTTCTAATAGG CCGGGGTTTATAGAGGGTTTAGAGGAACCCGCGAAGTATCCTTTCTTCCAGCTCCCATCAATCAACCGACTACGCAAACACAATGCGTGGTAACAAGATTGCTCATACTTTGCTCCGTCGAGCTCGAATCGCCGCCGTTTCCTCTCCATTCTCCCCCGTCGGAGCACCGTCGTCCACAGTCTTTGCCTCCGAAGCAACATCTTTTCAAACTACTTGCTCCTCTTTCTCCTGTCGCGACCACGCATTCGCCTTTTCCCCAACCGCAACCCTGCGGTTGTTCAATACCAATTCCTCTAAACACTTTCAAGATGAACTGAAACAAGCAAATCCTCTCCAGTATGGGAGGGAAGATGAGGGAGAAACCACGGATGGATGGGAAGAAGACGATGATCTAGAGCCTGAGCTTGGTGATGGAGGGGATGGTGGTGGTGTTGTTTTAAAAGGCGTGCCATGGGGTGAGCATGTTCTTCTTCTTGCCCAAGAGGTCCTGCTGCAATTTGGGGATGACATAAAACTCTATTCTTTCAAGGCCACTCCACGTGGGTACATTTATGTCAGATTAGATAAACTCTCACACGAATTTGGTTGTCCCAGCCTGGAGGAGCTTGAAAGTTATAGCAAAGAGTACAAAAAAAGATTGGATGAAACTGGAGCTCTTGGAAATATTCCCGATGATTTAGCTCTTGAGGTATCATCTCCAAGTGCAGAGAGATTACTGAAGGTTCCAGATGATCTATTTAGATTTAAAGCCATGCCAATGCGAGTTTCCTACATTGAGGATGCAGACTTGAGAGGCTCTGAAAATGATGGAGTTTTTATGCTGGATCATGTAGAATTGGAATCTGAGAGCTGTATCTGGAAATTGGCAAATGTGAGGGAAAACCGAGATCCGTTAAGTAAGGGTAGGCCTTTGACTCGTAAGCAGAAAGAATGGAGGTTAAAGTTACCCTATGCAAATCATAAGAAGGTATTCCTTTACCTTGAATGCTGAGAGTCAGCTCCTCAAGGTTCAAAAGAAAGGATGGGTTGTGTACTTAATTCATGAGGTTAGTGTTAGTTTTACGCAGGATTACTTTTATTTGAGGTCTTGGAGCTTTTCCACTTGGACACTTTCATCTGTTTGGAAAAGTTGTGTCCAGTTCAAGCATTATTTTCTAATAGG ATGCGTGGTAACAAGATTGCTCATACTTTGCTCCGTCGAGCTCGAATCGCCGCCGTTTCCTCTCCATTCTCCCCCGTCGGAGCACCGTCGTCCACAGTCTTTGCCTCCGAAGCAACATCTTTTCAAACTACTTGCTCCTCTTTCTCCTGTCGCGACCACGCATTCGCCTTTTCCCCAACCGCAACCCTGCGGTTGTTCAATACCAATTCCTCTAAACACTTTCAAGATGAACTGAAACAAGCAAATCCTCTCCAGTATGGGAGGGAAGATGAGGGAGAAACCACGGATGGATGGGAAGAAGACGATGATCTAGAGCCTGAGCTTGGTGATGGAGGGGATGGTGGTGGTGTTGTTTTAAAAGGCGTGCCATGGGGTGAGCATGTTCTTCTTCTTGCCCAAGAGGTCCTGCTGCAATTTGGGGATGACATAAAACTCTATTCTTTCAAGGCCACTCCACGTGGGTACATTTATGTCAGATTAGATAAACTCTCACACGAATTTGGTTGTCCCAGCCTGGAGGAGCTTGAAAGTTATAGCAAAGAGTACAAAAAAAGATTGGATGAAACTGGAGCTCTTGGAAATATTCCCGATGATTTAGCTCTTGAGGTATCATCTCCAAGTGCAGAGAGATTACTGAAGGTTCCAGATGATCTATTTAGATTTAAAGCCATGCCAATGCGAGTTTCCTACATTGAGGATGCAGACTTGAGAGGCTCTGAAAATGATGGAGTTTTTATGCTGGATCATGTAGAATTGGAATCTGAGAGCTGTATCTGGAAATTGGCAAATGTGAGGGAAAACCGAGATCCGTTAAGTAAGGGTAGGCCTTTGACTCGTAAGCAGAAAGAATGGAGGTTAAAGTTACCCTATGCAAATCATAAGAAGGTATTCCTTTACCTTGAATGCTGA MRGNKIAHTLLRRARIAAVSSPFSPVGAPSSTVFASEATSFQTTCSSFSCRDHAFAFSPTATLRLFNTNSSKHFQDELKQANPLQYGREDEGETTDGWEEDDDLEPELGDGGDGGGVVLKGVPWGEHVLLLAQEVLLQFGDDIKLYSFKATPRGYIYVRLDKLSHEFGCPSLEELESYSKEYKKRLDETGALGNIPDDLALEVSSPSAERLLKVPDDLFRFKAMPMRVSYIEDADLRGSENDGVFMLDHVELESESCIWKLANVRENRDPLSKGRPLTRKQKEWRLKLPYANHKKVFLYLEC Homology
BLAST of PI0009256 vs. ExPASy Swiss-Prot
Match: Q72NX1 (Ribosome maturation factor RimP OS=Leptospira interrogans serogroup Icterohaemorrhagiae serovar copenhageni (strain Fiocruz L1-130) OX=267671 GN=rimP PE=3 SV=1) HSP 1 Score: 62.8 bits (151), Expect = 7.8e-09 Identity = 41/107 (38.32%), Postives = 58/107 (54.21%), Query Frame = 0
BLAST of PI0009256 vs. ExPASy Swiss-Prot
Match: Q8F7K3 (Ribosome maturation factor RimP OS=Leptospira interrogans serogroup Icterohaemorrhagiae serovar Lai (strain 56601) OX=189518 GN=rimP PE=3 SV=1) HSP 1 Score: 62.8 bits (151), Expect = 7.8e-09 Identity = 41/107 (38.32%), Postives = 58/107 (54.21%), Query Frame = 0
BLAST of PI0009256 vs. ExPASy Swiss-Prot
Match: Q04U33 (Ribosome maturation factor RimP OS=Leptospira borgpetersenii serovar Hardjo-bovis (strain JB197) OX=355277 GN=rimP PE=3 SV=1) HSP 1 Score: 62.0 bits (149), Expect = 1.3e-08 Identity = 40/109 (36.70%), Postives = 58/109 (53.21%), Query Frame = 0
BLAST of PI0009256 vs. ExPASy Swiss-Prot
Match: Q04ZJ3 (Ribosome maturation factor RimP OS=Leptospira borgpetersenii serovar Hardjo-bovis (strain L550) OX=355276 GN=rimP PE=3 SV=1) HSP 1 Score: 62.0 bits (149), Expect = 1.3e-08 Identity = 40/109 (36.70%), Postives = 58/109 (53.21%), Query Frame = 0
BLAST of PI0009256 vs. ExPASy Swiss-Prot
Match: B0SH16 (Ribosome maturation factor RimP OS=Leptospira biflexa serovar Patoc (strain Patoc 1 / Ames) OX=355278 GN=rimP PE=3 SV=1) HSP 1 Score: 54.7 bits (130), Expect = 2.1e-06 Identity = 32/97 (32.99%), Postives = 54/97 (55.67%), Query Frame = 0
BLAST of PI0009256 vs. ExPASy TrEMBL
Match: A0A1S3BF38 (uncharacterized protein LOC103489189 isoform X3 OS=Cucumis melo OX=3656 GN=LOC103489189 PE=3 SV=1) HSP 1 Score: 552.0 bits (1421), Expect = 1.6e-153 Identity = 276/303 (91.09%), Postives = 287/303 (94.72%), Query Frame = 0
BLAST of PI0009256 vs. ExPASy TrEMBL
Match: A0A1S3BEL4 (uncharacterized protein LOC103489189 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103489189 PE=3 SV=1) HSP 1 Score: 537.0 bits (1382), Expect = 5.2e-149 Identity = 269/296 (90.88%), Postives = 280/296 (94.59%), Query Frame = 0
BLAST of PI0009256 vs. ExPASy TrEMBL
Match: A0A1S3BF35 (uncharacterized protein LOC103489189 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103489189 PE=3 SV=1) HSP 1 Score: 537.0 bits (1382), Expect = 5.2e-149 Identity = 269/296 (90.88%), Postives = 280/296 (94.59%), Query Frame = 0
BLAST of PI0009256 vs. ExPASy TrEMBL
Match: A0A0A0KW71 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G606760 PE=3 SV=1) HSP 1 Score: 532.7 bits (1371), Expect = 9.8e-148 Identity = 269/303 (88.78%), Postives = 280/303 (92.41%), Query Frame = 0
BLAST of PI0009256 vs. ExPASy TrEMBL
Match: A0A5D3CAZ4 (F4N2.17, putative isoform 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold475G00170 PE=4 SV=1) HSP 1 Score: 505.8 bits (1301), Expect = 1.3e-139 Identity = 260/303 (85.81%), Postives = 270/303 (89.11%), Query Frame = 0
BLAST of PI0009256 vs. NCBI nr
Match: XP_008446453.1 (PREDICTED: uncharacterized protein LOC103489189 isoform X3 [Cucumis melo] >XP_016900168.1 PREDICTED: uncharacterized protein LOC103489189 isoform X3 [Cucumis melo]) HSP 1 Score: 552.0 bits (1421), Expect = 3.2e-153 Identity = 276/303 (91.09%), Postives = 287/303 (94.72%), Query Frame = 0
BLAST of PI0009256 vs. NCBI nr
Match: XP_008446452.1 (PREDICTED: uncharacterized protein LOC103489189 isoform X2 [Cucumis melo]) HSP 1 Score: 537.0 bits (1382), Expect = 1.1e-148 Identity = 269/296 (90.88%), Postives = 280/296 (94.59%), Query Frame = 0
BLAST of PI0009256 vs. NCBI nr
Match: XP_008446450.1 (PREDICTED: uncharacterized protein LOC103489189 isoform X1 [Cucumis melo]) HSP 1 Score: 537.0 bits (1382), Expect = 1.1e-148 Identity = 269/296 (90.88%), Postives = 280/296 (94.59%), Query Frame = 0
BLAST of PI0009256 vs. NCBI nr
Match: XP_011655714.1 (uncharacterized protein LOC101211568 [Cucumis sativus] >KGN51986.1 hypothetical protein Csa_008608 [Cucumis sativus]) HSP 1 Score: 532.7 bits (1371), Expect = 2.0e-147 Identity = 269/303 (88.78%), Postives = 280/303 (92.41%), Query Frame = 0
BLAST of PI0009256 vs. NCBI nr
Match: XP_038891543.1 (uncharacterized protein LOC120080930 [Benincasa hispida] >XP_038891544.1 uncharacterized protein LOC120080930 [Benincasa hispida]) HSP 1 Score: 519.6 bits (1337), Expect = 1.8e-143 Identity = 263/302 (87.09%), Postives = 275/302 (91.06%), Query Frame = 0
BLAST of PI0009256 vs. TAIR 10
Match: AT1G69210.1 (Uncharacterised protein family UPF0090 ) HSP 1 Score: 280.4 bits (716), Expect = 1.7e-75 Identity = 143/263 (54.37%), Postives = 197/263 (74.90%), Query Frame = 0
BLAST of PI0009256 vs. TAIR 10
Match: AT1G77122.1 (Uncharacterised protein family UPF0090 ) HSP 1 Score: 173.3 bits (438), Expect = 2.9e-43 Identity = 106/292 (36.30%), Postives = 170/292 (58.22%), Query Frame = 0
BLAST of PI0009256 vs. TAIR 10
Match: AT1G69210.2 (Uncharacterised protein family UPF0090 ) HSP 1 Score: 151.0 bits (380), Expect = 1.5e-36 Identity = 82/165 (49.70%), Postives = 115/165 (69.70%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|