
PI0009227 (gene) Melon (PI 482460) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCAGAAAAGCTGCCAGGATGTAACATCCAGGGTTCGCCAACAATAGACTGTCAGATAAAAATCCTTAAGAGAACGTTCCAAGCCATTGCAGAAATGCACGACCCATCCTGCAGTGGGTTTGGATGGAACGATGAATTCAAGTGCATCATCGCTGAGAAGGAATTGTTCGACAATTGGGTGAAGGTACGTTATTCATTTTTTCGACCGTTATTTGTTTATAATAAAAAACTAATAATTTATTGAAACGTTTTCACAGAGTCATCCTGTCGCAAAGGGCCTCCTCAATAAATCCTTTCCCCATTACGATGACCTATCCTACGTATTTGGGAAAGATCGTGCTATTGGAGCACGCGAAGAGACATTCGCCGATGTGGGGTGGAATGTGCCAGGAGGGTACAAGGGATTTCCTGCCGACGATGCTAACGATCCAGAGACCCTTATGATGGATAGTTAA ATGGCAGAAAAGCTGCCAGGATGTAACATCCAGGGTTCGCCAACAATAGACTGTCAGATAAAAATCCTTAAGAGAACGTTCCAAGCCATTGCAGAAATGCACGACCCATCCTGCAGTGGGTTTGGATGGAACGATGAATTCAAGTGCATCATCGCTGAGAAGGAATTGTTCGACAATTGGGTGAAGAGTCATCCTGTCGCAAAGGGCCTCCTCAATAAATCCTTTCCCCATTACGATGACCTATCCTACGTATTTGGGAAAGATCGTGCTATTGGAGCACGCGAAGAGACATTCGCCGATGTGGGGTGGAATGTGCCAGGAGGGTACAAGGGATTTCCTGCCGACGATGCTAACGATCCAGAGACCCTTATGATGGATAGTTAA ATGGCAGAAAAGCTGCCAGGATGTAACATCCAGGGTTCGCCAACAATAGACTGTCAGATAAAAATCCTTAAGAGAACGTTCCAAGCCATTGCAGAAATGCACGACCCATCCTGCAGTGGGTTTGGATGGAACGATGAATTCAAGTGCATCATCGCTGAGAAGGAATTGTTCGACAATTGGGTGAAGAGTCATCCTGTCGCAAAGGGCCTCCTCAATAAATCCTTTCCCCATTACGATGACCTATCCTACGTATTTGGGAAAGATCGTGCTATTGGAGCACGCGAAGAGACATTCGCCGATGTGGGGTGGAATGTGCCAGGAGGGTACAAGGGATTTCCTGCCGACGATGCTAACGATCCAGAGACCCTTATGATGGATAGTTAA MAEKLPGCNIQGSPTIDCQIKILKRTFQAIAEMHDPSCSGFGWNDEFKCIIAEKELFDNWVKSHPVAKGLLNKSFPHYDDLSYVFGKDRAIGAREETFADVGWNVPGGYKGFPADDANDPETLMMDS Homology
BLAST of PI0009227 vs. ExPASy TrEMBL
Match: A0A5A7TYW0 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold109G00440 PE=4 SV=1) HSP 1 Score: 189.1 bits (479), Expect = 1.1e-44 Identity = 83/119 (69.75%), Postives = 95/119 (79.83%), Query Frame = 0
BLAST of PI0009227 vs. ExPASy TrEMBL
Match: A0A5A7V6Q9 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold99G00200 PE=4 SV=1) HSP 1 Score: 189.1 bits (479), Expect = 1.1e-44 Identity = 85/120 (70.83%), Postives = 98/120 (81.67%), Query Frame = 0
BLAST of PI0009227 vs. ExPASy TrEMBL
Match: A0A5A7VES2 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold21G002250 PE=4 SV=1) HSP 1 Score: 189.1 bits (479), Expect = 1.1e-44 Identity = 86/120 (71.67%), Postives = 97/120 (80.83%), Query Frame = 0
BLAST of PI0009227 vs. ExPASy TrEMBL
Match: A0A5D3CWL2 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G00640 PE=4 SV=1) HSP 1 Score: 188.7 bits (478), Expect = 1.5e-44 Identity = 85/120 (70.83%), Postives = 97/120 (80.83%), Query Frame = 0
BLAST of PI0009227 vs. ExPASy TrEMBL
Match: A0A5A7TRV1 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold153G00290 PE=4 SV=1) HSP 1 Score: 188.7 bits (478), Expect = 1.5e-44 Identity = 85/120 (70.83%), Postives = 97/120 (80.83%), Query Frame = 0
BLAST of PI0009227 vs. NCBI nr
Match: XP_031744343.1 (uncharacterized protein LOC116404989 [Cucumis sativus] >XP_031744344.1 uncharacterized protein LOC116404989 [Cucumis sativus]) HSP 1 Score: 194.1 bits (492), Expect = 7.2e-46 Identity = 85/127 (66.93%), Postives = 99/127 (77.95%), Query Frame = 0
BLAST of PI0009227 vs. NCBI nr
Match: XP_031743896.1 (uncharacterized protein LOC116404722 [Cucumis sativus] >XP_031743897.1 uncharacterized protein LOC116404722 [Cucumis sativus] >XP_031743898.1 uncharacterized protein LOC116404722 [Cucumis sativus]) HSP 1 Score: 194.1 bits (492), Expect = 7.2e-46 Identity = 85/119 (71.43%), Postives = 97/119 (81.51%), Query Frame = 0
BLAST of PI0009227 vs. NCBI nr
Match: XP_031742657.1 (uncharacterized protein LOC116404426 [Cucumis sativus] >XP_031742658.1 uncharacterized protein LOC116404426 [Cucumis sativus] >XP_031742659.1 uncharacterized protein LOC116404426 [Cucumis sativus]) HSP 1 Score: 190.7 bits (483), Expect = 8.0e-45 Identity = 86/127 (67.72%), Postives = 98/127 (77.17%), Query Frame = 0
BLAST of PI0009227 vs. NCBI nr
Match: KAA0066208.1 (retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 189.1 bits (479), Expect = 2.3e-44 Identity = 86/120 (71.67%), Postives = 97/120 (80.83%), Query Frame = 0
BLAST of PI0009227 vs. NCBI nr
Match: KAA0047166.1 (retrotransposon protein [Cucumis melo var. makuwa] >TYK01162.1 retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 189.1 bits (479), Expect = 2.3e-44 Identity = 83/119 (69.75%), Postives = 95/119 (79.83%), Query Frame = 0
BLAST of PI0009227 vs. TAIR 10
Match: AT2G24960.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G02210.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 48.1 bits (113), Expect = 5.9e-06 Identity = 16/54 (29.63%), Postives = 35/54 (64.81%), Query Frame = 0
BLAST of PI0009227 vs. TAIR 10
Match: AT4G02210.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G24960.2); Has 791 Blast hits to 465 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 17; Plants - 748; Viruses - 0; Other Eukaryotes - 26 (source: NCBI BLink). ) HSP 1 Score: 48.1 bits (113), Expect = 5.9e-06 Identity = 22/91 (24.18%), Postives = 46/91 (50.55%), Query Frame = 0
BLAST of PI0009227 vs. TAIR 10
Match: AT4G02210.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G24960.2). ) HSP 1 Score: 48.1 bits (113), Expect = 5.9e-06 Identity = 22/91 (24.18%), Postives = 46/91 (50.55%), Query Frame = 0
BLAST of PI0009227 vs. TAIR 10
Match: AT2G24960.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G02210.2); Has 1453 Blast hits to 509 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 39; Plants - 1363; Viruses - 0; Other Eukaryotes - 50 (source: NCBI BLink). ) HSP 1 Score: 45.1 bits (105), Expect = 5.0e-05 Identity = 17/46 (36.96%), Postives = 29/46 (63.04%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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