Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTGAGGCAAAGACGAGTGAATTTTGGGACAAAAGCAGTCAACGCGTTCTTTGGGTTAGAAGACAATGAAGTGGGGCAAGTAATTTTCAAGAACTCCACTCCACAAGATAAAGAGGATGCGTTGAAGAAGATAGCTTGGTCAGGCACAAAATGGGACGTAACACCAACAGGGAAGTACCAGCTCTTCGCGCACAACTTAAATACAGAAGCAAGTGTTTGGTACTTCTTTGTAAAGAAGAAAATTATGCCATCATGCCATGATAACACTATTGCATTGGACAAAGCGATGCTCCTTTGTTGCATTATAGAGGAGTTACCCATAAATCTTGGCGAGATAGTTTGTCAACAAATTCATGCGTTTGTGAGGCATCCACGCGGTGCAAGACCCTTCCCATATTTAATAGAACAGTTATGTCTAAAGGTAGTGCCCGAGTTAAAGACTTTCCCTACGATCCCCATCAAAGATGGCTTGTGTTCCATCACAAGTCTTAAACGCATCATTAACCTCCACAAGAACAAGGCTGAAACGGGACGCCTCAATTCACAAAGGATGGAAAAAGTGAAAGGATGA
mRNA sequence
ATGGTGAGGCAAAGACGAGTGAATTTTGGGACAAAAGCAGTCAACGCGTTCTTTGGGTTAGAAGACAATGAAGTGGGGCAAGTAATTTTCAAGAACTCCACTCCACAAGATAAAGAGGATGCGTTGAAGAAGATAGCTTGGTCAGGCACAAAATGGGACGTAACACCAACAGGGAAGTACCAGCTCTTCGCGCACAACTTAAATACAGAAGCAAGTGTTTGGTACTTCTTTGTAAAGAAGAAAATTATGCCATCATGCCATGATAACACTATTGCATTGGACAAAGCGATGCTCCTTTGTTGCATTATAGAGGAGTTACCCATAAATCTTGGCGAGATAGTTTGTCAACAAATTCATGCGTTTGTGAGGCATCCACGCGGTGCAAGACCCTTCCCATATTTAATAGAACAGTTATGTCTAAAGGTAGTGCCCGAGTTAAAGACTTTCCCTACGATCCCCATCAAAGATGGCTTGTGTTCCATCACAAGTCTTAAACGCATCATTAACCTCCACAAGAACAAGGCTGAAACGGGACGCCTCAATTCACAAAGGATGGAAAAAGTGAAAGGATGA
Coding sequence (CDS)
ATGGTGAGGCAAAGACGAGTGAATTTTGGGACAAAAGCAGTCAACGCGTTCTTTGGGTTAGAAGACAATGAAGTGGGGCAAGTAATTTTCAAGAACTCCACTCCACAAGATAAAGAGGATGCGTTGAAGAAGATAGCTTGGTCAGGCACAAAATGGGACGTAACACCAACAGGGAAGTACCAGCTCTTCGCGCACAACTTAAATACAGAAGCAAGTGTTTGGTACTTCTTTGTAAAGAAGAAAATTATGCCATCATGCCATGATAACACTATTGCATTGGACAAAGCGATGCTCCTTTGTTGCATTATAGAGGAGTTACCCATAAATCTTGGCGAGATAGTTTGTCAACAAATTCATGCGTTTGTGAGGCATCCACGCGGTGCAAGACCCTTCCCATATTTAATAGAACAGTTATGTCTAAAGGTAGTGCCCGAGTTAAAGACTTTCCCTACGATCCCCATCAAAGATGGCTTGTGTTCCATCACAAGTCTTAAACGCATCATTAACCTCCACAAGAACAAGGCTGAAACGGGACGCCTCAATTCACAAAGGATGGAAAAAGTGAAAGGATGA
Protein sequence
MVRQRRVNFGTKAVNAFFGLEDNEVGQVIFKNSTPQDKEDALKKIAWSGTKWDVTPTGKYQLFAHNLNTEASVWYFFVKKKIMPSCHDNTIALDKAMLLCCIIEELPINLGEIVCQQIHAFVRHPRGARPFPYLIEQLCLKVVPELKTFPTIPIKDGLCSITSLKRIINLHKNKAETGRLNSQRMEKVKG
Homology
BLAST of PI0009171 vs. ExPASy TrEMBL
Match:
A0A5D3D2B5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold306G001360 PE=4 SV=1)
HSP 1 Score: 198.4 bits (503), Expect = 2.8e-47
Identity = 91/183 (49.73%), Postives = 127/183 (69.40%), Query Frame = 0
Query: 1 MVRQRRVNFGTKAVNAFFGLEDNEVGQVIFKNSTPQDKEDALKKIAWSGTKWDVTPTGKY 60
MV+ +V+F +NAFFGLE NE+G IFKN +D E ALK++AWSGTKWD+T T +Y
Sbjct: 15 MVKGHKVDFRLDTINAFFGLETNEIGHAIFKNPQERDLEYALKRVAWSGTKWDITITRRY 74
Query: 61 QLFAHNLNTEASVWYFFVKKKIMPSCHDNTIALDKAMLLCCIIEELPINLGEIVCQQIHA 120
LF HNLN E S+W F KKKI+P+ HD I++++ ML+ CI+EE+P+N+GEI+ + I A
Sbjct: 75 HLFLHNLNIEVSIWLVFEKKKIIPTRHDIAISMERIMLVYCIMEEIPMNIGEIISEHIIA 134
Query: 121 FVRHPRGARPFPYLIEQLCLKVVPELKTFPTIPIKDGLCSITSLKRIINLHKNKAETGRL 180
+V+H GARPF YLIE+ LK L P + +KDG+ + +L II +HKNK + L
Sbjct: 135 WVKHLHGARPFSYLIEKFYLKACLALNQLPQVEVKDGVWPVATLHHIIVVHKNKTKLKHL 194
Query: 181 NSQ 184
++
Sbjct: 195 KTK 197
BLAST of PI0009171 vs. ExPASy TrEMBL
Match:
A0A5D3CW17 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold32G00800 PE=4 SV=1)
HSP 1 Score: 175.3 bits (443), Expect = 2.5e-40
Identity = 84/182 (46.15%), Postives = 123/182 (67.58%), Query Frame = 0
Query: 2 VRQRRVNFGTKAVNAFFGLEDNEVGQVIFKNSTPQDKEDALKKIAWSGTKWDVTPTGKYQ 61
V+++RV+FG KA+NA +GL++NE+G +IF+N +D +DAL+ I W GTKWD PT KYQ
Sbjct: 80 VKEKRVDFGPKAINALYGLKNNEIGHLIFENPKARDLQDALENIIWPGTKWDRMPTEKYQ 139
Query: 62 LFAHNLNTEASVWYFFVKKKIMPSCHDNTIALDKAMLLCCIIEELPINLGEIVCQQIHAF 121
LF ++LNTE SVW F+KK IMP+ HD+TI+++ MLL + N EI C+ + A+
Sbjct: 140 LFPNDLNTEVSVWLVFIKKNIMPTRHDSTISMEIIMLLYYNGDSNQFN--EISCEHLIAW 199
Query: 122 VRHPRGARPFPYLIEQLCLKVVPELKTFPTIPIKDGLCSITSLKRIINLHKNKAETGRLN 181
V+HP GA+PF L +QL +K PEL+ + + +G+C +L R I +HKNK + L
Sbjct: 200 VKHPCGAKPFLCLTKQLYIKAYPELEKSQQVQVSNGVCIGPTLHRFITIHKNKTKLRHLQ 259
Query: 182 SQ 184
+
Sbjct: 260 EK 259
BLAST of PI0009171 vs. ExPASy TrEMBL
Match:
A0A5D3D7L3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold416G00290 PE=4 SV=1)
HSP 1 Score: 172.2 bits (435), Expect = 2.1e-39
Identity = 78/144 (54.17%), Postives = 103/144 (71.53%), Query Frame = 0
Query: 1 MVRQRRVNFGTKAVNAFFGLEDNEVGQVIFKNSTPQDKEDALKKIAWSGTKWDVTPTGKY 60
MV ++V+FG A+N FGLE E+ IFKN +D EDALK++AW TKWD+ PTGKY
Sbjct: 1 MVEGKKVDFGPDAINQLFGLEAKEIEHAIFKNPQERDLEDALKRVAWPRTKWDIMPTGKY 60
Query: 61 QLFAHNLNTEASVWYFFVKKKIMPSCHDNTIALDKAMLLCCIIEELPINLGEIVCQQIHA 120
QLF NLNTEA +W FVK I P+ HD+TI+++ ML+ CI+E L +N+ EI+ + I A
Sbjct: 61 QLFLQNLNTEAIIWLVFVKNDIRPTRHDSTISMEHIMLVYCIMEHLLVNIVEIISEHIIA 120
Query: 121 FVRHPRGARPFPYLIEQLCLKVVP 145
+V+HPR RPF +LIE+LCLK P
Sbjct: 121 WVKHPRRTRPFSHLIEKLCLKACP 144
BLAST of PI0009171 vs. ExPASy TrEMBL
Match:
A0A5D3DVQ6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1142G00370 PE=4 SV=1)
HSP 1 Score: 161.0 bits (406), Expect = 4.9e-36
Identity = 70/128 (54.69%), Postives = 100/128 (78.12%), Query Frame = 0
Query: 37 DKEDALKKIAWSGTKWDVTPTGKYQLFAHNLNTEASVWYFFVKKKIMPSCHDNTIALDKA 96
D ++AL+++AW+ KWDVT KY+LF HNL TEASVW F+KKK+MP+ HDNTI+ ++
Sbjct: 165 DMQEALERVAWARKKWDVTSIKKYRLFLHNLTTEASVWLVFIKKKLMPTRHDNTISFERI 224
Query: 97 MLLCCIIEELPINLGEIVCQQIHAFVRHPRGARPFPYLIEQLCLKVVPELKTFPTIP-IK 156
MLL CI+EE+P+++ EI+C I A+V+HPRGA+PFP+LIE+LCL+ EL+ P I ++
Sbjct: 225 MLLYCIMEEIPVDVDEIICDHIKAWVQHPRGAKPFPHLIERLCLRSCSELEQSPQIACVQ 284
Query: 157 DGLCSITS 164
DG+C+ S
Sbjct: 285 DGMCNTKS 292
BLAST of PI0009171 vs. ExPASy TrEMBL
Match:
A0A5A7U0U4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold133G001210 PE=4 SV=1)
HSP 1 Score: 157.1 bits (396), Expect = 7.1e-35
Identity = 71/137 (51.82%), Postives = 99/137 (72.26%), Query Frame = 0
Query: 2 VRQRRVNFGTKAVNAFFGLEDNEVGQVIFKNSTPQDKEDALKKIAWSGTKWDVTPTGKYQ 61
V+ +R+NFG +N +GL++N +G IFKN ++ ++AL+K WSGTKWD PT YQ
Sbjct: 122 VKGKRINFGPSTINVIYGLKNNGLGHGIFKNPKDRNLQEALEKAKWSGTKWDQIPTYMYQ 181
Query: 62 LFAHNLNTEASVWYFFVKKKIMPSCHDNTIALDKAMLLCCIIEELPINLGEIVCQQIHAF 121
LF HNL TEASVW F+KK IMP+ HDN I++++ MLL II E+ +N+GEI+C+ + A
Sbjct: 182 LFPHNLTTEASVWLVFIKKNIMPTHHDNIISMERIMLLYYIIMEILVNVGEIICEHLTAG 241
Query: 122 VRHPRGARPFPYLIEQL 139
V+HPR A+ F LI+QL
Sbjct: 242 VKHPREAQQFSRLIKQL 258
BLAST of PI0009171 vs. NCBI nr
Match:
KAA0041933.1 (hypothetical protein E6C27_scaffold67G003500 [Cucumis melo var. makuwa] >TYK17865.1 hypothetical protein E5676_scaffold306G001360 [Cucumis melo var. makuwa])
HSP 1 Score: 198.4 bits (503), Expect = 5.7e-47
Identity = 91/183 (49.73%), Postives = 127/183 (69.40%), Query Frame = 0
Query: 1 MVRQRRVNFGTKAVNAFFGLEDNEVGQVIFKNSTPQDKEDALKKIAWSGTKWDVTPTGKY 60
MV+ +V+F +NAFFGLE NE+G IFKN +D E ALK++AWSGTKWD+T T +Y
Sbjct: 15 MVKGHKVDFRLDTINAFFGLETNEIGHAIFKNPQERDLEYALKRVAWSGTKWDITITRRY 74
Query: 61 QLFAHNLNTEASVWYFFVKKKIMPSCHDNTIALDKAMLLCCIIEELPINLGEIVCQQIHA 120
LF HNLN E S+W F KKKI+P+ HD I++++ ML+ CI+EE+P+N+GEI+ + I A
Sbjct: 75 HLFLHNLNIEVSIWLVFEKKKIIPTRHDIAISMERIMLVYCIMEEIPMNIGEIISEHIIA 134
Query: 121 FVRHPRGARPFPYLIEQLCLKVVPELKTFPTIPIKDGLCSITSLKRIINLHKNKAETGRL 180
+V+H GARPF YLIE+ LK L P + +KDG+ + +L II +HKNK + L
Sbjct: 135 WVKHLHGARPFSYLIEKFYLKACLALNQLPQVEVKDGVWPVATLHHIIVVHKNKTKLKHL 194
Query: 181 NSQ 184
++
Sbjct: 195 KTK 197
BLAST of PI0009171 vs. NCBI nr
Match:
KAA0041264.1 (hypothetical protein E6C27_scaffold128G002490 [Cucumis melo var. makuwa] >TYK16063.1 hypothetical protein E5676_scaffold32G00800 [Cucumis melo var. makuwa])
HSP 1 Score: 175.3 bits (443), Expect = 5.2e-40
Identity = 84/182 (46.15%), Postives = 123/182 (67.58%), Query Frame = 0
Query: 2 VRQRRVNFGTKAVNAFFGLEDNEVGQVIFKNSTPQDKEDALKKIAWSGTKWDVTPTGKYQ 61
V+++RV+FG KA+NA +GL++NE+G +IF+N +D +DAL+ I W GTKWD PT KYQ
Sbjct: 80 VKEKRVDFGPKAINALYGLKNNEIGHLIFENPKARDLQDALENIIWPGTKWDRMPTEKYQ 139
Query: 62 LFAHNLNTEASVWYFFVKKKIMPSCHDNTIALDKAMLLCCIIEELPINLGEIVCQQIHAF 121
LF ++LNTE SVW F+KK IMP+ HD+TI+++ MLL + N EI C+ + A+
Sbjct: 140 LFPNDLNTEVSVWLVFIKKNIMPTRHDSTISMEIIMLLYYNGDSNQFN--EISCEHLIAW 199
Query: 122 VRHPRGARPFPYLIEQLCLKVVPELKTFPTIPIKDGLCSITSLKRIINLHKNKAETGRLN 181
V+HP GA+PF L +QL +K PEL+ + + +G+C +L R I +HKNK + L
Sbjct: 200 VKHPCGAKPFLCLTKQLYIKAYPELEKSQQVQVSNGVCIGPTLHRFITIHKNKTKLRHLQ 259
Query: 182 SQ 184
+
Sbjct: 260 EK 259
BLAST of PI0009171 vs. NCBI nr
Match:
KAA0057652.1 (hypothetical protein E6C27_scaffold43054G00260 [Cucumis melo var. makuwa] >TYK19535.1 hypothetical protein E5676_scaffold416G00290 [Cucumis melo var. makuwa])
HSP 1 Score: 172.2 bits (435), Expect = 4.4e-39
Identity = 78/144 (54.17%), Postives = 103/144 (71.53%), Query Frame = 0
Query: 1 MVRQRRVNFGTKAVNAFFGLEDNEVGQVIFKNSTPQDKEDALKKIAWSGTKWDVTPTGKY 60
MV ++V+FG A+N FGLE E+ IFKN +D EDALK++AW TKWD+ PTGKY
Sbjct: 1 MVEGKKVDFGPDAINQLFGLEAKEIEHAIFKNPQERDLEDALKRVAWPRTKWDIMPTGKY 60
Query: 61 QLFAHNLNTEASVWYFFVKKKIMPSCHDNTIALDKAMLLCCIIEELPINLGEIVCQQIHA 120
QLF NLNTEA +W FVK I P+ HD+TI+++ ML+ CI+E L +N+ EI+ + I A
Sbjct: 61 QLFLQNLNTEAIIWLVFVKNDIRPTRHDSTISMEHIMLVYCIMEHLLVNIVEIISEHIIA 120
Query: 121 FVRHPRGARPFPYLIEQLCLKVVP 145
+V+HPR RPF +LIE+LCLK P
Sbjct: 121 WVKHPRRTRPFSHLIEKLCLKACP 144
BLAST of PI0009171 vs. NCBI nr
Match:
KAA0054837.1 (hypothetical protein E6C27_scaffold406G00150 [Cucumis melo var. makuwa] >TYK27771.1 hypothetical protein E5676_scaffold1142G00370 [Cucumis melo var. makuwa])
HSP 1 Score: 161.0 bits (406), Expect = 1.0e-35
Identity = 70/128 (54.69%), Postives = 100/128 (78.12%), Query Frame = 0
Query: 37 DKEDALKKIAWSGTKWDVTPTGKYQLFAHNLNTEASVWYFFVKKKIMPSCHDNTIALDKA 96
D ++AL+++AW+ KWDVT KY+LF HNL TEASVW F+KKK+MP+ HDNTI+ ++
Sbjct: 165 DMQEALERVAWARKKWDVTSIKKYRLFLHNLTTEASVWLVFIKKKLMPTRHDNTISFERI 224
Query: 97 MLLCCIIEELPINLGEIVCQQIHAFVRHPRGARPFPYLIEQLCLKVVPELKTFPTIP-IK 156
MLL CI+EE+P+++ EI+C I A+V+HPRGA+PFP+LIE+LCL+ EL+ P I ++
Sbjct: 225 MLLYCIMEEIPVDVDEIICDHIKAWVQHPRGAKPFPHLIERLCLRSCSELEQSPQIACVQ 284
Query: 157 DGLCSITS 164
DG+C+ S
Sbjct: 285 DGMCNTKS 292
BLAST of PI0009171 vs. NCBI nr
Match:
KAA0047856.1 (hypothetical protein E6C27_scaffold133G001210 [Cucumis melo var. makuwa])
HSP 1 Score: 157.1 bits (396), Expect = 1.5e-34
Identity = 71/137 (51.82%), Postives = 99/137 (72.26%), Query Frame = 0
Query: 2 VRQRRVNFGTKAVNAFFGLEDNEVGQVIFKNSTPQDKEDALKKIAWSGTKWDVTPTGKYQ 61
V+ +R+NFG +N +GL++N +G IFKN ++ ++AL+K WSGTKWD PT YQ
Sbjct: 122 VKGKRINFGPSTINVIYGLKNNGLGHGIFKNPKDRNLQEALEKAKWSGTKWDQIPTYMYQ 181
Query: 62 LFAHNLNTEASVWYFFVKKKIMPSCHDNTIALDKAMLLCCIIEELPINLGEIVCQQIHAF 121
LF HNL TEASVW F+KK IMP+ HDN I++++ MLL II E+ +N+GEI+C+ + A
Sbjct: 182 LFPHNLTTEASVWLVFIKKNIMPTHHDNIISMERIMLLYYIIMEILVNVGEIICEHLTAG 241
Query: 122 VRHPRGARPFPYLIEQL 139
V+HPR A+ F LI+QL
Sbjct: 242 VKHPREAQQFSRLIKQL 258
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A5D3D2B5 | 2.8e-47 | 49.73 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
| A0A5D3CW17 | 2.5e-40 | 46.15 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
| A0A5D3D7L3 | 2.1e-39 | 54.17 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
| A0A5D3DVQ6 | 4.9e-36 | 54.69 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
| A0A5A7U0U4 | 7.1e-35 | 51.82 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| KAA0041933.1 | 5.7e-47 | 49.73 | hypothetical protein E6C27_scaffold67G003500 [Cucumis melo var. makuwa] >TYK1786... | [more] |
| KAA0041264.1 | 5.2e-40 | 46.15 | hypothetical protein E6C27_scaffold128G002490 [Cucumis melo var. makuwa] >TYK160... | [more] |
| KAA0057652.1 | 4.4e-39 | 54.17 | hypothetical protein E6C27_scaffold43054G00260 [Cucumis melo var. makuwa] >TYK19... | [more] |
| KAA0054837.1 | 1.0e-35 | 54.69 | hypothetical protein E6C27_scaffold406G00150 [Cucumis melo var. makuwa] >TYK2777... | [more] |
| KAA0047856.1 | 1.5e-34 | 51.82 | hypothetical protein E6C27_scaffold133G001210 [Cucumis melo var. makuwa] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
