PI0009087 (gene) Melon (PI 482460) v1

Overview


Name	PI0009087
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Unknown protein
Location	chr11: 14705485 .. 14705694 (-)
RNA-Seq Expression	PI0009087
Synteny	PI0009087

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTGGTGATGCAGCTCCTGCCTCGCCAAAATGGTGGTGGTGCAACTCTAGCTCTCCAAGATGATGATGATGGTGCAGCTTCGCCTCCGCCTCTCCAAAATGATGATTATGGTGCAGCTCCGCCTCTATCTCTCCAAAATGATGATGATGGTGCAGCTCTGCCTCTGTCTCTCCAAAATGATGATGATGGTGCAGTTCCCCCTCTTTAA

mRNA sequence

ATGGTGGTGATGCAGCTCCTGCCTCGCCAAAATGGTGGTGGTGCAACTCTAGCTCTCCAAGATGATGATGATGGTGCAGCTTCGCCTCCGCCTCTCCAAAATGATGATTATGGTGCAGCTCCGCCTCTATCTCTCCAAAATGATGATGATGGTGCAGCTCTGCCTCTGTCTCTCCAAAATGATGATGATGGTGCAGTTCCCCCTCTTTAA

Coding sequence (CDS)

ATGGTGGTGATGCAGCTCCTGCCTCGCCAAAATGGTGGTGGTGCAACTCTAGCTCTCCAAGATGATGATGATGGTGCAGCTTCGCCTCCGCCTCTCCAAAATGATGATTATGGTGCAGCTCCGCCTCTATCTCTCCAAAATGATGATGATGGTGCAGCTCTGCCTCTGTCTCTCCAAAATGATGATGATGGTGCAGTTCCCCCTCTTTAA

Protein sequence

MVVMQLLPRQNGGGATLALQDDDDGAASPPPLQNDDYGAAPPLSLQNDDDGAALPLSLQNDDDGAVPPL

Homology

[Close]

BLAST of PI0009087 vs. ExPASy TrEMBL
Match: A0A5A7T1T0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold862G00470 PE=4 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 2.3e-07
Identity = 35/51 (68.63%), Postives = 38/51 (74.51%), Query Frame = 0


Query: 22 DDDGAASPPPLQNDDYGAAPPLSLQNDDDGAALPLSLQNDDD---GAVPPL 70
          +D+GAA PPPLQ DD GA PPL LQ+DDDG A PL LQNDDD   G  PPL
Sbjct: 30 NDNGAARPPPLQKDD-GATPPLPLQDDDDGIAPPLPLQNDDDDDNGTTPPL 79

[Close]

BLAST of PI0009087 vs. ExPASy TrEMBL
Match: A0A5D3BA63 (Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold110G002170 PE=4 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 1.4e-04
Identity = 32/66 (48.48%), Postives = 40/66 (60.61%), Query Frame = 0


Query: 1  MVVMQLLPRQNGGGATLALQDDDDGAASPPPLQ-NDDYGAAPPLSLQNDDDGAALPLSLQ 60
          M+++QL    NG      LQDD++G    P LQ +DD G APP SLQ++DD A LP  LQ
Sbjct: 20 MIMVQLRKDDNGAALPPPLQDDNNGTTLSPLLQDDDDGGVAPPPSLQDEDDSATLPPPLQ 79

Query: 61 NDDDGA 66
           DD  A
Sbjct: 80 KDDGTA 85

[Close]

BLAST of PI0009087 vs. ExPASy TrEMBL
Match: A0A5A7T1P5 (Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold20G001480 PE=4 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 1.4e-04
Identity = 32/66 (48.48%), Postives = 40/66 (60.61%), Query Frame = 0


Query: 1   MVVMQLLPRQNGGGATLALQDDDDGAASPPPLQ-NDDYGAAPPLSLQNDDDGAALPLSLQ 60
           M+++QL    NG      LQDD++G    P LQ +DD G APP SLQ++DD A LP  LQ
Sbjct: 189 MIMVQLRKDDNGAALPPPLQDDNNGTTLSPLLQDDDDGGVAPPPSLQDEDDSATLPPPLQ 248

Query: 61  NDDDGA 66
            DD  A
Sbjct: 249 KDDGTA 254

[Close]

BLAST of PI0009087 vs. ExPASy TrEMBL
Match: A0A5D3DVP6 (Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold22G00580 PE=4 SV=1)

HSP 1 Score: 52.8 bits (125), Expect = 6.8e-04
Identity = 27/50 (54.00%), Postives = 36/50 (72.00%), Query Frame = 0


Query: 19 LQDDDDGAASPPPLQNDDYGAAPPLSLQNDDDGAALPLSLQNDDDGAVPP 69
          L D+DDGAA    LQ+D+ G APP SL+++++GA LPL +Q DDD A  P
Sbjct: 25 LHDNDDGAAPLKRLQDDNDGVAPPSSLKDENNGATLPLPIQEDDDSASLP 74

[Close]

BLAST of PI0009087 vs. ExPASy TrEMBL
Match: A0A5D3D7G6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold416G00170 PE=4 SV=1)

HSP 1 Score: 52.8 bits (125), Expect = 6.8e-04
Identity = 27/47 (57.45%), Postives = 33/47 (70.21%), Query Frame = 0


Query: 19  LQDDDDGAASPPPLQNDDYGAAPPLSLQNDDDGAALPLSLQNDDDGA 66
           LQ+DDDG A PPPLQ D+  AA  L +Q D++  A PLS+Q DDD A
Sbjct: 162 LQNDDDGEAPPPPLQVDEDRAASTLLIQEDENSIASPLSIQEDDDDA 208

[Close]

BLAST of PI0009087 vs. NCBI nr
Match: KAA0035405.1 (uncharacterized protein E6C27_scaffold285G00180 [Cucumis melo var. makuwa] >TYK25750.1 uncharacterized protein E5676_scaffold862G00470 [Cucumis melo var. makuwa])

HSP 1 Score: 64.3 bits (155), Expect = 4.7e-07
Identity = 35/51 (68.63%), Postives = 38/51 (74.51%), Query Frame = 0


Query: 22 DDDGAASPPPLQNDDYGAAPPLSLQNDDDGAALPLSLQNDDD---GAVPPL 70
          +D+GAA PPPLQ DD GA PPL LQ+DDDG A PL LQNDDD   G  PPL
Sbjct: 30 NDNGAARPPPLQKDD-GATPPLPLQDDDDGIAPPLPLQNDDDDDNGTTPPL 79

[Close]

BLAST of PI0009087 vs. NCBI nr
Match: KAA0036843.1 (putative mitochondrial protein [Cucumis melo var. makuwa])

HSP 1 Score: 55.1 bits (131), Expect = 2.8e-04
Identity = 32/66 (48.48%), Postives = 40/66 (60.61%), Query Frame = 0


Query: 1   MVVMQLLPRQNGGGATLALQDDDDGAASPPPLQ-NDDYGAAPPLSLQNDDDGAALPLSLQ 60
           M+++QL    NG      LQDD++G    P LQ +DD G APP SLQ++DD A LP  LQ
Sbjct: 189 MIMVQLRKDDNGAALPPPLQDDNNGTTLSPLLQDDDDGGVAPPPSLQDEDDSATLPPPLQ 248

Query: 61  NDDDGA 66
            DD  A
Sbjct: 249 KDDGTA 254

[Close]

BLAST of PI0009087 vs. NCBI nr
Match: TYJ95909.1 (putative mitochondrial protein [Cucumis melo var. makuwa])

HSP 1 Score: 55.1 bits (131), Expect = 2.8e-04
Identity = 32/66 (48.48%), Postives = 40/66 (60.61%), Query Frame = 0


Query: 1  MVVMQLLPRQNGGGATLALQDDDDGAASPPPLQ-NDDYGAAPPLSLQNDDDGAALPLSLQ 60
          M+++QL    NG      LQDD++G    P LQ +DD G APP SLQ++DD A LP  LQ
Sbjct: 20 MIMVQLRKDDNGAALPPPLQDDNNGTTLSPLLQDDDDGGVAPPPSLQDEDDSATLPPPLQ 79

Query: 61 NDDDGA 66
           DD  A
Sbjct: 80 KDDGTA 85

The following BLAST results are available for this feature:

BLAST of PI0009087 vs.


Match Name	E-value	Identity	Description

BLAST of PI0009087 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7T1T0	2.3e-07	68.63	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5D3BA63	1.4e-04	48.48	Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s...	[more]
A0A5A7T1P5	1.4e-04	48.48	Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_s...	[more]
A0A5D3DVP6	6.8e-04	54.00	Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s...	[more]
A0A5D3D7G6	6.8e-04	57.45	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]

BLAST of PI0009087 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0035405.1	4.7e-07	68.63	uncharacterized protein E6C27_scaffold285G00180 [Cucumis melo var. makuwa] >TYK2...	[more]
KAA0036843.1	2.8e-04	48.48	putative mitochondrial protein [Cucumis melo var. makuwa]	[more]
TYJ95909.1	2.8e-04	48.48	putative mitochondrial protein [Cucumis melo var. makuwa]	[more]

BLAST of PI0009087 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..69

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0009087.1	PI0009087.1	mRNA